BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0755 (infB) DE:translation initiation factor aIF-2 (infB)
(992 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75093 translation initiation factor aIF-2 (infb) PAB0755 [... 1958 0.0
sp|O58822|IF2P_PYRHO PROBABLE TRANSLATION INITIATION FACTOR IF-2... 1580 0.0
sp|Q57710|IF2P_METJA PROBABLE TRANSLATION INITIATION FACTOR IF-2... 793 0.0
sp|O26359|IF2P_METTH PROBABLE TRANSLATION INITIATION FACTOR IF-2... 608 e-173
sp|Q9Y9B3|IF2P_AERPE PROBABLE TRANSLATION INITIATION FACTOR IF-2... 585 e-166
gi|11498374 translation initiation factor IF-2 (infB) [Archaeogl... 575 e-163
gb|AAK40570.1| Translation initiation factor IF2 homolog (infB) ... 543 e-153
gb|AAG20168.1| (AE005094) bacterial-like IF2; InfB [Halobacteriu... 493 e-138
sp|P95691|IF2P_SULAC PROBABLE TRANSLATION INITIATION FACTOR IF-2... 478 e-133
sp|O93625|IF2P_HALHA PROBABLE TRANSLATION INITIATION FACTOR IF-2... 445 e-124
emb|CAC12239.1| (AL445066) translation initiation factor IF-2 re... 420 e-116
gb|AAF04442.1|AC010718_11 (AC010718) putative translation initia... 374 e-102
sp|O60841|IF2P_HUMAN TRANSLATION INITIATION FACTOR IF-2 >gi|3882... 373 e-102
pir||T43483 translation initiation factor IF-2 homolog [similari... 373 e-102
emb|CAB44357.1| (AJ006776) IF2 protein [Homo sapiens] 372 e-101
gb|AAF36532.1|AF143207_1 (AF143207) IF2 protein [Drosophila mela... 371 e-101
sp|Q10251|IF2P_SCHPO PROBABLE TRANSLATION INITIATION FACTOR IF-2... 371 e-101
gi|7706232 KIAA0741 gene product; translation initiation factor ... 370 e-101
gb|AAF04443.1|AC010718_12 (AC010718) putative translation initia... 360 3e-98
gi|6319282 97 kDa protein; Fun12p [Saccharomyces cerevisiae] >gi... 358 2e-97
gb|AAF04435.1|AC010718_4 (AC010718) putative translation initiat... 348 2e-94
gb|AAA57228.1| (L29389) Fun12p [Saccharomyces cerevisiae] 347 4e-94
gb|AAF80646.1|AC012190_2 (AC012190) Contains similarity to F28O1... 343 6e-93
gb|AAF47774.1| (AE003478) cIF2 gene product [Drosophila melanoga... 271 3e-71
gb|AAC73030.1| (AC005824) putative translation initiation factor... 266 8e-70
emb|CAA07018.1| (AJ006412) putative GTP-binding protein [Homo sa... 221 3e-56
sp|Q9WZN3|IF2_THEMA TRANSLATION INITIATION FACTOR IF-2 >gi|74434... 190 8e-47
emb|CAB13536.1| (Z99112) initiation factor IF-2 [Bacillus subtilis] 182 1e-44
sp|P17889|IF2_BACSU TRANSLATION INITIATION FACTOR IF-2 >gi|98394... 182 1e-44
sp|O67825|IF2_AQUAE TRANSLATION INITIATION FACTOR IF-2 >gi|74434... 178 3e-43
sp|Q9ZF20|IF2_STRAG TRANSLATION INITIATION FACTOR IF-2 >gi|39477... 176 8e-43
emb|CAC00485.1| (AJ251493) initiation Factor 2 [Streptococcus ag... 176 8e-43
emb|CAC00497.1| (AJ251499) initiation factor 2 [Streptococcus ag... 176 8e-43
emb|CAC00493.1| (AJ251497) initiation factor 2 [Streptococcus ag... 175 2e-42
pir||H81430 translation initiation factor IF-2 Cj0136 [imported]... 170 6e-41
sp|P18311|IF2_ENTFC TRANSLATION INITIATION FACTOR IF-2 >gi|15366... 169 1e-40
pir||C75351 translation initiation factor IF-2 - Deinococcus rad... 164 3e-39
sp|P55875|IF2_STIAU TRANSLATION INITIATION FACTOR IF-2 >gi|11277... 163 1e-38
dbj|BAB06132.1| (AP001515) translation initiation factor IF-2 [B... 162 1e-38
sp|P72689|IF2_SYNY3 TRANSLATION INITIATION FACTOR IF-2 >gi|74708... 161 3e-38
sp|Q9X764|IF2_LACLA TRANSLATION INITIATION FACTOR IF-2 >gi|45839... 160 6e-38
gi|11467694 initiation factor IF2 [Guillardia theta] >gi|6016314... 159 1e-37
sp|P44323|IF2_HAEIN TRANSLATION INITIATION FACTOR IF-2 >gi|10749... 157 4e-37
sp|P48515|IF2_THETH TRANSLATION INITIATION FACTOR IF-2 >gi|10729... 157 4e-37
pir||G83052 translation initiation factor IF-2 PA4744 [imported]... 155 2e-36
sp|Q9ZF28|IF2_KLEOX TRANSLATION INITIATION FACTOR IF-2 >gi|38507... 154 4e-36
emb|CAA05699.1| (AJ002735) Initiation factor IF2-beta [Klebsiell... 154 4e-36
emb|CAA05700.1| (AJ002735) initiation factor IF2-gamma [Klebsiel... 154 4e-36
sp|P02995|IF2_ECOLI TRANSLATION INITIATION FACTOR IF-2 >gi|74289... 154 5e-36
emb|CAA25202.1| (X00513) initiation factor IF2-beta (infB; gtg s... 154 5e-36
emb|CAA05546.1| (AJ002542) Initiation factor IF2-gamma [Escheric... 154 5e-36
emb|CAA05535.1| (AJ002539) Initiation factor IF2-alpha [Escheric... 153 1e-35
pir||B82831 translation initiation factor IF-2 XF0235 [imported]... 153 1e-35
emb|CAA05532.1| (AJ002538) Initiation factor IF2-alpha [Escheric... 153 1e-35
emb|CAA05533.1| (AJ002538) Initiation factor IF2-beta [Escherich... 153 1e-35
emb|CAA05534.1| (AJ002538) Initiation factor IF2-gamma [Escheric... 153 1e-35
emb|CAA05536.1| (AJ002539) Initiation factor IF2-beta [Escherich... 153 1e-35
emb|CAA05537.1| (AJ002539) Initiation factor IF2-gamma [Escheric... 153 1e-35
sp|Q9ZF22|IF2_PROVU TRANSLATION INITIATION FACTOR IF-2 >gi|38508... 152 2e-35
emb|CAA05709.1| (AJ002737) initiation factor IF2-beta [Proteus v... 152 2e-35
sp|Q9ZF31|IF2_SALTY TRANSLATION INITIATION FACTOR IF-2 >gi|38591... 152 2e-35
emb|CAA05551.1| (AJ002552) initiation factor IF2-gamma [Salmonel... 152 2e-35
emb|CAA05550.1| (AJ002552) initiation factor IF2-beta [Salmonell... 152 2e-35
pir||C81060 translation initiation factor IF-2 NMB1643 [imported... 152 2e-35
sp|Q9Z5I9|IF2_MYCLE TRANSLATION INITIATION FACTOR IF-2 >gi|44556... 152 2e-35
sp|Q9ZF25|IF2_ENTCL TRANSLATION INITIATION FACTOR IF-2 >gi|38506... 151 3e-35
emb|CAA05704.1| (AJ002736) initiation factor IF2-beta [Enterobac... 151 3e-35
emb|CAA05705.1| (AJ002736) initiation factor IF2-gamma [Enteroba... 151 3e-35
sp|P04766|IF2_BACST TRANSLATION INITIATION FACTOR IF-2 >gi|80212... 150 7e-35
gb|AAD50011.1|AC007651_6 (AC007651) Similar to translation initi... 149 1e-34
pir||B82906 translation initiation factor IF-2 UU320 [imported] ... 149 1e-34
sp|P71613|IF2_MYCTU TRANSLATION INITIATION FACTOR IF-2 >gi|74781... 148 3e-34
sp|Q9ZCZ8|IF2_RICPR TRANSLATION INITIATION FACTOR IF-2 >gi|74434... 146 1e-33
pir||G81709 translation initiation factor 2 TC0371 [imported] - ... 145 2e-33
sp|Q9ZM46|IF2_HELPJ TRANSLATION INITIATION FACTOR IF-2 >gi|74654... 145 2e-33
sp|P55972|IF2_HELPY TRANSLATION INITIATION FACTOR IF-2 >gi|74434... 144 4e-33
sp|O84098|IF2_CHLTR TRANSLATION INITIATION FACTOR IF-2 >gi|74434... 143 1e-32
sp|O83861|IF2_TREPA TRANSLATION INITIATION FACTOR IF-2 >gi|74434... 139 2e-31
gb|AAD20591.1| (AF109129) chloroplast initiation factor 2 [Eugle... 138 2e-31
gi|11465723 initiation factor 2 [Porphyra purpurea] >gi|1708414|... 137 5e-31
sp|Q9Z8M1|IF2_CHLPN TRANSLATION INITIATION FACTOR IF-2 >gi|74434... 137 7e-31
pir||E81576 translation initiation factor 2 CP0440 [imported] - ... 137 7e-31
sp|O59683|IF2M_SCHPO TRANSLATION INITIATION FACTOR IF-2, MITOCHO... 137 7e-31
sp|P47388|IF2_MYCGE TRANSLATION INITIATION FACTOR IF-2 >gi|13618... 131 4e-29
gi|6324550 mitochondrial initiation factor 2; Ifm1p [Saccharomyc... 130 7e-29
emb|CAA41268.1| (X58379) mitochondrial initiation factor 2 [Sac... 130 9e-29
gb|AAC63272.1| (AF069739) translation initiation factor 2 [Apis ... 129 2e-28
emb|CAB91142.1| (AL355913) putative translation initiation facto... 129 2e-28
emb|CAA12734.1| (AJ227963) translational initiation factor IF2 [... 123 7e-27
emb|CAA12736.1| (AJ227965) translational initiation factor IF2 [... 122 2e-26
emb|CAA12767.1| (AJ227996) translational initiation factor IF2 [... 116 9e-25
gi|4505277 mitochondrial translational initiation factor 2 precu... 116 1e-24
gi|11428756 mitochondrial translational initiation factor 2 prec... 116 1e-24
sp|P46198|IF2M_BOVIN TRANSLATION INITIATION FACTOR IF-2, MITOCHO... 110 9e-23
gb|AAB58905.1| (U74759) [Chlamydia trachomatis] 108 3e-22
emb|CAA12744.1| (AJ227973) translational initiation factor IF2 [... 102 1e-20
emb|CAA12743.1| (AJ227972) translational initiation factor IF2 [... 101 6e-20
emb|CAA12762.1| (AJ227991) translational initiation factor IF2 [... 101 6e-20
emb|CAA05391.1| (AJ002407) translational initiation factor IF2 [... 100 7e-20
emb|CAA12748.1| (AJ227977) translational initiation factor IF2 [... 100 1e-19
emb|CAA12753.1| (AJ227982) translational initiation factor IF2 [... 100 1e-19
emb|CAA05392.1| (AJ002408) translational initiation factor IF2 [... 100 1e-19
emb|CAA05386.1| (AJ002402) translational initiation factor IF2 [... 100 1e-19
emb|CAA12765.1| (AJ227994) translational initiation factor IF2 [... 99 2e-19
emb|CAA12740.1| (AJ227969) translational initiation factor IF2 [... 99 3e-19
emb|CAA12732.1| (AJ227961) translational initiation factor IF2 [... 98 4e-19
emb|CAA12739.1| (AJ227968) translational initiation factor IF2 [... 98 4e-19
emb|CAA05389.1| (AJ002405) translational initiation factor IF2 [... 98 5e-19
emb|CAA12749.1| (AJ227978) translational initiation factor IF2 [... 98 5e-19
emb|CAA12758.1| (AJ227987) translational initiation factor IF2 [... 98 5e-19
emb|CAA12747.1| (AJ227976) translational initiation factor IF2 [... 98 5e-19
emb|CAA05387.1| (AJ002403) translational initiation factor IF2 [... 98 6e-19
emb|CAA12761.1| (AJ227990) translational initiation factor IF2 [... 98 6e-19
emb|CAA12763.1| (AJ227992) translational initiation factor IF2 [... 97 8e-19
emb|CAA12742.1| (AJ227971) translational initiation factor IF2 [... 92 3e-17
emb|CAA12759.1| (AJ227988) translational initiation factor IF2 [... 92 3e-17
emb|CAA12760.1| (AJ227989) translational initiation factor IF2 [... 92 3e-17
>pir||E75093 translation initiation factor aIF-2 (infb) PAB0755 [similarity] -
Pyrococcus abyssi (strain Orsay)
>gi|5458562|emb|CAB50050.1| (AJ248286) translation
initiation factor aIF-2 (infB) [Pyrococcus abyssi]
Length = 992
Score = 1958 bits (5016), Expect = 0.0
Identities = 992/992 (100%), Positives = 992/992 (100%)
Query: 1 MTKRIRQPIIAVLGHVDHGKCLLPDEKVVVPSVGFVTLKELFETASKVVERDDEKEIREL 60
MTKRIRQPIIAVLGHVDHGKCLLPDEKVVVPSVGFVTLKELFETASKVVERDDEKEIREL
Sbjct: 1 MTKRIRQPIIAVLGHVDHGKCLLPDEKVVVPSVGFVTLKELFETASKVVERDDEKEIREL 60
Query: 61 DERITSVNGDGKTGLVKASYVWKVRHKGKVIRVKLKNWHGVTVTPEHPFLTTKGWKRADQ 120
DERITSVNGDGKTGLVKASYVWKVRHKGKVIRVKLKNWHGVTVTPEHPFLTTKGWKRADQ
Sbjct: 61 DERITSVNGDGKTGLVKASYVWKVRHKGKVIRVKLKNWHGVTVTPEHPFLTTKGWKRADQ 120
Query: 121 LRPGDYVAVPRFIHGNEDEKIFLSYVKVKKSGEEWKEYFYLAGRKGNIDVNLLFVAPKRY 180
LRPGDYVAVPRFIHGNEDEKIFLSYVKVKKSGEEWKEYFYLAGRKGNIDVNLLFVAPKRY
Sbjct: 121 LRPGDYVAVPRFIHGNEDEKIFLSYVKVKKSGEEWKEYFYLAGRKGNIDVNLLFVAPKRY 180
Query: 181 VVEFLRGYFEERSEVKGESVIVEARELVEPLSLALLRFGIFSKIQGSKLIVTGKRNLEAF 240
VVEFLRGYFEERSEVKGESVIVEARELVEPLSLALLRFGIFSKIQGSKLIVTGKRNLEAF
Sbjct: 181 VVEFLRGYFEERSEVKGESVIVEARELVEPLSLALLRFGIFSKIQGSKLIVTGKRNLEAF 240
Query: 241 KDYIGFKDEREKALEEAIEKVKGSEVYPIFEEIRRLRLLFGFTREELGSYAKYENSEAPT 300
KDYIGFKDEREKALEEAIEKVKGSEVYPIFEEIRRLRLLFGFTREELGSYAKYENSEAPT
Sbjct: 241 KDYIGFKDEREKALEEAIEKVKGSEVYPIFEEIRRLRLLFGFTREELGSYAKYENSEAPT 300
Query: 301 YEELMEILDFIERGSPSLSKKIAILEGKLKAELRVLEEEGLIKDGKLTPLGRELLEVWRN 360
YEELMEILDFIERGSPSLSKKIAILEGKLKAELRVLEEEGLIKDGKLTPLGRELLEVWRN
Sbjct: 301 YEELMEILDFIERGSPSLSKKIAILEGKLKAELRVLEEEGLIKDGKLTPLGRELLEVWRN 360
Query: 361 REFDSKDVDYIRNIAETLVFIPVENVEEEEYDGYVYDLTTETHNFIANGILVHNTTLLDR 420
REFDSKDVDYIRNIAETLVFIPVENVEEEEYDGYVYDLTTETHNFIANGILVHNTTLLDR
Sbjct: 361 REFDSKDVDYIRNIAETLVFIPVENVEEEEYDGYVYDLTTETHNFIANGILVHNTTLLDR 420
Query: 421 IRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFT 480
IRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFT
Sbjct: 421 IRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFT 480
Query: 481 SLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDE 540
SLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDE
Sbjct: 481 SLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDE 540
Query: 541 PFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIG 600
PFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIG
Sbjct: 541 PFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIG 600
Query: 601 IAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTI 660
IAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTI
Sbjct: 601 IAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTI 660
Query: 661 VVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALAGSPV 720
VVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALAGSPV
Sbjct: 661 VVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALAGSPV 720
Query: 721 IAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEIPIRKAD 780
IAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEIPIRKAD
Sbjct: 721 IAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEIPIRKAD 780
Query: 781 VGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDY 840
VGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDY
Sbjct: 781 VGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDY 840
Query: 841 EEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKPGVTLIK 900
EEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKPGVTLIK
Sbjct: 841 EEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKPGVTLIK 900
Query: 901 QNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIEGAIVGRHIHPGETLYVDLSRDDAITLL 960
QNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIEGAIVGRHIHPGETLYVDLSRDDAITLL
Sbjct: 901 QNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIEGAIVGRHIHPGETLYVDLSRDDAITLL 960
Query: 961 KHLRDTLEDTDIKALKMIAKVKAKEDPFWRAI 992
KHLRDTLEDTDIKALKMIAKVKAKEDPFWRAI
Sbjct: 961 KHLRDTLEDTDIKALKMIAKVKAKEDPFWRAI 992
>sp|O58822|IF2P_PYRHO PROBABLE TRANSLATION INITIATION FACTOR IF-2 >gi|7521499|pir||H71049
translation initiation factor aIF-2 PH1095 [similarity] -
Pyrococcus horikoshii >gi|3257511|dbj|BAA30194.1|
(AP000005) 1044aa long hypothetical translation
initiation factor IF-2 [Pyrococcus horikoshii]
Length = 1044
Score = 1580 bits (4045), Expect = 0.0
Identities = 799/1040 (76%), Positives = 898/1040 (85%), Gaps = 50/1040 (4%)
Query: 3 KRIRQPIIAVLGHVDHGKCLLPDEKVVVPSVGFVTLKELFETASKVVERDDEKEIRELDE 62
KRIRQPIIAVLGHVDHGKCLLP+E+V++P G +TL+ELF + V +D+EKE+R+L
Sbjct: 5 KRIRQPIIAVLGHVDHGKCLLPEERVILPDYGPITLEELFNMTKETVFKDEEKEVRKLGI 64
Query: 63 RITSVNGDGKTGLVKASYVWKVRHKGKVIRVKLKNWHGVTVTPEHPFLTTKGWKRADQLR 122
R+ DG+ L++ YVWKVR+KGK++RVKLK+WH V VTPEHPFLTT+GW RADQL+
Sbjct: 65 RMPVAGVDGRVRLLEGPYVWKVRYKGKMLRVKLKDWHSVAVTPEHPFLTTRGWVRADQLK 124
Query: 123 PGDYVAVPRFIHGNEDEKIFLSYV----------KVKKSGEEWKEYFYLAG----RKGNI 168
PGDYVAVP+ + G +D++ FL YV K+ S EEW+ +FY AG R+ ++
Sbjct: 125 PGDYVAVPKILPGKDDKEKFLQYVHEKLKGKVHIKLPSSDEEWETFFYFAGTIFGRENSV 184
Query: 169 D-------------------------VNLLFVAPKRYVVEFLRGYFEERSEVKGESVIVE 203
+ + +LF+AP RYV FLRG+F+ V GE + VE
Sbjct: 185 NPEGLTHEVKALLELFKVLFEYPREVLRVLFMAPVRYVANFLRGFFDINGYVNGEELRVE 244
Query: 204 AR----ELVEPLSLALLRFGIFSKIQGSKLIVTGKRNLEAFKDYIGFKDERE-KALEEAI 258
R E++E LSL LLR GI SKI + L ++G+RNLE F+ YIGF ++++ K LE I
Sbjct: 245 VRGAPHEVLEELSLILLRLGIVSKIYPTSLAISGRRNLELFRRYIGFSEKQKAKELEGII 304
Query: 259 EKVKGSEVYPIFEEIRRLRLLFGFTREELGS----YAKYENSEAPTYEELMEILDFIERG 314
+ + SE YPIFEE+RR+RLLFGFTR EL S Y+KYE+ EAP+YE LM+IL+ IE+G
Sbjct: 305 RRSENSESYPIFEELRRIRLLFGFTRAELSSTIPLYSKYESKEAPSYEILMKILNTIEKG 364
Query: 315 SPSLSKKIAILEGKLKAE--LRVLEEEGLIKDGKLTPLGRELLEVWRNREFDSKDVDYIR 372
S L+KKI ILEG+++ + + EGLIKDGKLT LG+ELLEVWRNREFDS+DV+Y+R
Sbjct: 365 SKDLNKKITILEGRVRDHEYIEEFKREGLIKDGKLTELGKELLEVWRNREFDSRDVNYLR 424
Query: 373 NIAETLVFIPVENVEEEEYDGYVYDLTTETHNFIANGILVHNTTLLDRIRKTNVAAKEAG 432
NI E VF+PVE +EE EYDGYVYD+TTETHNFIANGILVHNTTLLD+IRKTNVAAKEAG
Sbjct: 425 NIIENFVFLPVEKIEEFEYDGYVYDVTTETHNFIANGILVHNTTLLDKIRKTNVAAKEAG 484
Query: 433 GITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTSLRARGGSLADL 492
GITQHIGATEVPI+VVKKIAGPLIKLWKAEI+LPGLLFIDTPGHEAFTSLRARGGSLADL
Sbjct: 485 GITQHIGATEVPIDVVKKIAGPLIKLWKAEIRLPGLLFIDTPGHEAFTSLRARGGSLADL 544
Query: 493 AVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEPFLMNIKKQDQR 552
AVLV+D+NEGFQPQTIESIEILR+YRTPFVVAANKIDRI+GWVIEEDEPFLMNIK+QDQR
Sbjct: 545 AVLVIDVNEGFQPQTIESIEILRRYRTPFVVAANKIDRIRGWVIEEDEPFLMNIKRQDQR 604
Query: 553 AVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGIAELLVLIAGLS 612
A+QELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGIAELLVLIAGLS
Sbjct: 605 AIQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGIAELLVLIAGLS 664
Query: 613 QRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVGGKDKAIVTK 672
Q+YLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVGGKDKAIVTK
Sbjct: 665 QKYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVGGKDKAIVTK 724
Query: 673 IRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALAGSPVIAAPTPEDVEKA 732
+RALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALAGSPVIAAPTPEDVE+A
Sbjct: 725 VRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALAGSPVIAAPTPEDVERA 784
Query: 733 KQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEIPIRKADVGNVSKTDVMEA 792
K+EI+ QIE VVISTDKVGVIVKADTLGSLEALSKELQEKEIPIRKADVGN+SKTDVMEA
Sbjct: 785 KEEIMRQIESVVISTDKVGVIVKADTLGSLEALSKELQEKEIPIRKADVGNISKTDVMEA 844
Query: 793 LSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKK 852
LSVKEE PKYGVILGFNVKVNEDA+EVAKAK+V IFVGN+IYKLIEDYE W+KEEEEK+K
Sbjct: 845 LSVKEENPKYGVILGFNVKVNEDAKEVAKAKEVPIFVGNIIYKLIEDYEAWIKEEEEKRK 904
Query: 853 RELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKPGVTLIKQNGQKVGVIRSI 912
RELL+KVTFPGVI+LYPDERYVFRRSNPAIVGIEV+EGRIKPGVTLIKQNGQKVG IRSI
Sbjct: 905 RELLAKVTFPGVIKLYPDERYVFRRSNPAIVGIEVLEGRIKPGVTLIKQNGQKVGTIRSI 964
Query: 913 KSRDEFLQEAKKGQAVAIAIEGAIVGRHIHPGETLYVDLSRDDAITLLKHLRDTLEDTDI 972
KSRDEFLQEA+KGQAVAIAIEGAIVGRHIHPGETLYVDLSRDDAI LLKHLRD LEDTDI
Sbjct: 965 KSRDEFLQEARKGQAVAIAIEGAIVGRHIHPGETLYVDLSRDDAIILLKHLRDVLEDTDI 1024
Query: 973 KALKMIAKVKAKEDPFWRAI 992
KALKMIA+VKAKEDPFWRA+
Sbjct: 1025 KALKMIAQVKAKEDPFWRAV 1044
>sp|Q57710|IF2P_METJA PROBABLE TRANSLATION INITIATION FACTOR IF-2 >gi|2127929|pir||G64332
FUN12/bIF-2 family probable translation initiation factor
homolog (intron-containing) - Methanococcus jannaschii
>gi|1590990|gb|AAB98248.1| (U67481) translation
initiation factor aIF-2 (infB) [Methanococcus jannaschii]
Length = 1155
Score = 793 bits (2027), Expect = 0.0
Identities = 417/846 (49%), Positives = 601/846 (70%), Gaps = 35/846 (4%)
Query: 172 LLFVAPKRYVVEFLRGYFEERSEVKGES----VIVEARELVEPLSLALLRFGIFSKIQGS 227
+L++APK V EF++GYF+ V VI ++E +E LS+ LLRF I SKI
Sbjct: 315 ILYIAPKELVAEFIKGYFDADGYVNLRQNRIEVISASKEFIEGLSILLLRFEITSKIYEI 374
Query: 228 K------------LIVTGKRNLEAFKDYIGFKDE-REKALEEAIEKVKGSEVYPIFEEIR 274
K L + GKRNL+ FK+ IGF + +E+ L + IEK + SE YPI ++++
Sbjct: 375 KKSYKETKKKYYQLNIVGKRNLKNFKN-IGFSIKYKEENLNKIIEKSRKSEKYPINKDMK 433
Query: 275 RLRLLFGFTREELGS--YAKYENS-EAPTYEELMEILDFIERGSPSLSKKIAILEGKLKA 331
RLR+LFG TR E+ YAKYEN E P+YE + + L+ ++ +L KKI +LEGK +
Sbjct: 434 RLRILFGMTRNEVNVSYYAKYENGKEIPSYEIVKKFLNSLK--PKNLDKKIKVLEGKERD 491
Query: 332 E--LRVLEEEGLIKDGKLTPLGRELLEVWRNREFDSKDVDYIRNIAETLVFIPVENVEEE 389
L+ E +GLI++G+LT LGRE L +W+N EF +++DY++++ E + F+ VE+VE
Sbjct: 492 VNYLKAFESDGLIENGRLTKLGREALNIWKNHEFGKENIDYMKSLIENIAFVEVEDVEII 551
Query: 390 EYDGYVYDLTTETHNFIANGILVHNTTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVK 449
+YDGYVYDLTTETHNFIANGI+VHNTTLLD+IRKT VA +EAGGITQHIGA+E+PI+V+K
Sbjct: 552 DYDGYVYDLTTETHNFIANGIVVHNTTLLDKIRKTRVAKREAGGITQHIGASEIPIDVIK 611
Query: 450 KIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIE 509
++ G L+K+ KA++K+PGLL IDTPGHEAFTSLR RGG+LAD+A+LVVDINEGF+PQT+E
Sbjct: 612 RLCGDLLKMLKADLKIPGLLVIDTPGHEAFTSLRKRGGALADIAILVVDINEGFKPQTVE 671
Query: 510 SIEILRKYRTPFVVAANKIDRIKGWVIEEDEPFLMNI--KKQDQRAVQELETKLWE-LIG 566
++ ILR+ +TPFVVAANKID I GW +E PF++N K Q A+ E E +L+E +I
Sbjct: 672 AVNILRQCKTPFVVAANKIDLIPGWNSKEG-PFILNFNEKNQHPNALTEFEIRLYENIIK 730
Query: 567 KFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEG 626
E GF A+ + RVQ+ T+ + I+P+SA G GI +LL+++AGL+Q++LE++LK+ VEG
Sbjct: 731 PLNELGFDADLYSRVQDVTKTVCIIPVSAVTGEGIPDLLMMVAGLAQKFLEDRLKLNVEG 790
Query: 627 PARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIR 686
A+GTILEV+EE GLG TID IIYDG + D +VVG D +VT+++ALLKPKPLDE+R
Sbjct: 791 YAKGTILEVKEEKGLGTTIDAIIYDGIAKRGDYLVVGLPDDVLVTRVKALLKPKPLDEMR 850
Query: 687 DPRFRFDYVDEVTAAAGVKIAAPGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS 746
DPR +F V+EVTAAAGVKIAAP L++ +AG P+ P + +E+AK+E+++++E I
Sbjct: 851 DPRDKFKPVNEVTAAAGVKIAAPELDKVIAGCPIRIVP-KDKIEEAKEEVMKEVEEAKIE 909
Query: 747 TDKVGVIVKADTLGSLEALSKELQEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVIL 806
D G+++KADTLGSLEAL+ EL++ + I+KA+VG+V+K DV+E S K+ P +G I+
Sbjct: 910 VDDEGILIKADTLGSLEALANELRKAGVKIKKAEVGDVTKKDVIEVASYKQSNPLHGAIV 969
Query: 807 GFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIR 866
FNVK+ +A++ + D+K+F+ N+IYKL+ED+ EW+K+EEE+ K K+ P +IR
Sbjct: 970 AFNVKILPEAQKEIEKYDIKVFLDNIIYKLVEDFTEWIKKEEERIKYGEFEKLIKPAIIR 1029
Query: 867 LYPDERYVFRRSNPAIVGIEVIEGRIKPGVTLIKQNGQKVGVIRSIKSRDEFLQEAKKGQ 926
+ PD +FR+ +PAI G+EV+ G ++ G L++++G ++G +R IK R E ++EAK G+
Sbjct: 1030 ILPD--CIFRQKDPAICGVEVLCGTLRVGAPLMREDGMQLGYVREIKDRGENVKEAKAGK 1087
Query: 927 AVAIAIEGAIV-GRHIHPGETLYVDLSRDDAITLLKHLRDTLEDTDIKALKMIAKV--KA 983
AV+IAI+G +V RH+ G+ +YV + L D L + + +AL ++ K
Sbjct: 1088 AVSIAIDGRVVLKRHVDEGDYMYVAVPESHVRELYHKYMDRLRNDEKEALLRYMELMQKL 1147
Query: 984 KEDPFW 989
+ FW
Sbjct: 1148 TNNIFW 1153
Score = 172 bits (432), Expect = 1e-41
Identities = 73/147 (49%), Positives = 112/147 (75%), Gaps = 1/147 (0%)
Query: 3 KRIRQPIIAVLGHVDHGKCLLPDEKVVVPSVGFVTLKELFETASKVVERDDEKEIRELDE 62
+ +R PI+ VLGHVDHGKCL+P EKV+ G + +++LF+ ++VE+D+ KEIR+L+
Sbjct: 13 QNLRCPIVCVLGHVDHGKCLMPHEKVLT-EYGEIKIEDLFKIGKEIVEKDELKEIRKLNI 71
Query: 63 RITSVNGDGKTGLVKASYVWKVRHKGKVIRVKLKNWHGVTVTPEHPFLTTKGWKRADQLR 122
++ ++N +G+ ++ A YVWK++HKGK+I+VKLKNWH +T TPEHPFLT GW +A+ ++
Sbjct: 72 KVHTLNENGEIKIINAPYVWKLKHKGKMIKVKLKNWHSITTTPEHPFLTNNGWIKAENIK 131
Query: 123 PGDYVAVPRFIHGNEDEKIFLSYVKVK 149
G YVA+PR I+GNED + F+ ++ K
Sbjct: 132 KGMYVAIPRKIYGNEDFEKFIEFINSK 158
>sp|O26359|IF2P_METTH PROBABLE TRANSLATION INITIATION FACTOR IF-2 >gi|7482858|pir||E69132
translation initiation factor aIF-2 MTH259 [similarity]
- Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621309|gb|AAB84765.1| (AE000812) translation
initiation factor IF2 homolog [Methanobacterium
thermoautotrophicum]
Length = 594
Score = 608 bits (1552), Expect = e-173
Identities = 304/575 (52%), Positives = 418/575 (71%), Gaps = 5/575 (0%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD IR + VA++EAGGITQHIGATE+P++V++ I G +K + LPGL FIDTP
Sbjct: 19 TTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRETLPGLFFIDTP 78
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAFT+LR RGG+LADLA+L+VDINEGF+PQT E++ ILR YRTPFVVAANKIDRI GW
Sbjct: 79 GHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMYRTPFVVAANKIDRIHGW 138
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+ E PF+ KQD + Q+L+TK++EL+GK +E GF++ RFDRV +F +++I+PIS
Sbjct: 139 RVHEGRPFMETFSKQDIQVQQKLDTKVYELVGKLHEEGFESERFDRVTDFASQVSIIPIS 198
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G GI ELL ++ GL+Q+YL E+LKIE + PARGTILEV+EE GLG TID +IYDG L
Sbjct: 199 AITGEGIPELLTMLMGLAQQYLREQLKIEEDSPARGTILEVKEETGLGMTIDAVIYDGIL 258
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
KDDTI + I T+IR+LLKP+PL+E+R+ R +F VDEV AAAG+KI APG+++
Sbjct: 259 RKDDTIAMMTSKDVISTRIRSLLKPRPLEEMRESRKKFQKVDEVVAAAGIKIVAPGIDDV 318
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEI 774
+AGSP+ P EK ++EIL +IE + I TD+ GV+VKADTLGSLEA+ K L++ +
Sbjct: 319 MAGSPLRVVTDP---EKVREEILSEIEDIKIDTDEAGVVVKADTLGSLEAVVKILRDMYV 375
Query: 775 PIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIY 834
PI+ AD+G+VS+ DV+ A +E+ YG I+ FNVKV A + K D+K+F GNVIY
Sbjct: 376 PIKVADIGDVSRRDVVNAGIALQEDRVYGAIIAFNVKVIPSAAQELKNSDIKLFQGNVIY 435
Query: 835 KLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKP 894
+L+E+YEEWV+ EE+KK++ + + P IRL P + VFR+S PAI G+EV+ G I+
Sbjct: 436 RLMEEYEEWVRGIEEEKKKKWMEAIIKPASIRLIP--KLVFRQSKPAIGGVEVLTGVIRQ 493
Query: 895 GVTLIKQNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIEGAIVGRHIHPGETLYVDLSRD 954
G L+ +G+ VG + S++ + E L+ A +GQ VA+AI+ A+ G+ IH G+TLYVD+ +
Sbjct: 494 GYPLMNDDGETVGTVESMQDKGENLKSASRGQKVAMAIKDAVYGKTIHEGDTLYVDIPEN 553
Query: 955 DAITLLKHLRDTLEDTDIKALKMIAKVKAKEDPFW 989
L + L L D ++ + IA++K K++P W
Sbjct: 554 HYHILKEQLSGDLTDEELDLMDKIAEIKRKKNPDW 588
>sp|Q9Y9B3|IF2P_AERPE PROBABLE TRANSLATION INITIATION FACTOR IF-2 >gi|7521488|pir||C72466
probable translation initiation factor aIF-2 APE2374
[similarity] - Aeropyrum pernix (strain K1)
>gi|5106076|dbj|BAA81387.1| (AP000064) 617aa long
hypothetical transcription initiation factor IF-2
[Aeropyrum pernix]
Length = 617
Score = 585 bits (1492), Expect = e-166
Identities = 291/571 (50%), Positives = 416/571 (71%), Gaps = 4/571 (0%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD+IR+T VAAKEAGGITQHIGA+ VP +V++KIA PL K+ ++ +PGLLFIDTP
Sbjct: 30 TTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKLVIPGLLFIDTP 89
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE F++LR RGGS+AD A+LVVDI EGF+PQT E++E+L++ R PF++AANKIDRI GW
Sbjct: 90 GHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEALELLKERRVPFLIAANKIDRIPGW 149
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
D PF+ I++QD + + LE +++E++GK YE G A F R+++F R++AIVP+S
Sbjct: 150 KPNPDAPFIETIRRQDPKVREILEQRVYEIVGKMYEAGLPAELFTRIKDFRRKIAIVPVS 209
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A+ G GI ELL ++AGL+Q YL+E+L+ EGPA+G +LEV+E G G +D +IYDG L
Sbjct: 210 ARTGEGIPELLAVLAGLTQTYLKERLRY-AEGPAKGVVLEVKEMQGFGTVVDAVIYDGVL 268
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
K+D IVVGG++ IVT++RALL P PL +IR RF VD V AAAGV+IAAPGL++
Sbjct: 269 KKEDIIVVGGREGPIVTRVRALLMPAPLQDIRSREARFVQVDRVYAAAGVRIAAPGLDDV 328
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEI 774
+AGSP+ AA + E+ K + + +IE + T+ +GV+VKADTLG+LEAL + L+ + +
Sbjct: 329 IAGSPIYAAESEEEARKLMEAVQREIEELRFRTENIGVVVKADTLGTLEALVEALRRRGV 388
Query: 775 PIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIY 834
P+R AD+G VS++DV++A ++ +P GV+L FNVKV +AEE A VKIF ++IY
Sbjct: 389 PVRLADIGPVSRSDVLDAAVTRKIDPYLGVVLAFNVKVLPEAEEEASRAGVKIFRESMIY 448
Query: 835 KLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKP 894
KLIEDYEEWVK+E+E ++ + L+ + PG R+ P YVFRRS+PAIVG+EV+ G I+P
Sbjct: 449 KLIEDYEEWVKKEKEAERLKALNSLIRPGKFRILPG--YVFRRSDPAIVGVEVLGGVIRP 506
Query: 895 GVTLIKQNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIEGAI-VGRHIHPGETLYVDLSR 953
G ++ G+++G I +IK RD L+EA+ G AVA++I+G I +GRH + G+ LY ++
Sbjct: 507 GYPVMDSQGRELGRIMAIKDRDRSLEEARLGAAVAVSIQGRILIGRHANEGDILYTNVPA 566
Query: 954 DDAITLLKHLRDTLEDTDIKALKMIAKVKAK 984
A +L +D + ++ L+ IA++K +
Sbjct: 567 QHAYKILTEFKDLVSKDELDVLREIAEIKRR 597
>gi|11498374 translation initiation factor IF-2 (infB) [Archaeoglobus fulgidus]
>gi|6016316|sp|O29490|IF2P_ARCFU PROBABLE TRANSLATION
INITIATION FACTOR IF-2 >gi|7483990|pir||H69345
translation initiation factor aIF-2 (infB) AF0768
[similarity] - Archaeoglobus fulgidus
>gi|2649835|gb|AAB90465.1| (AE001051) translation
initiation factor IF-2 (infB) [Archaeoglobus fulgidus]
Length = 595
Score = 575 bits (1467), Expect = e-163
Identities = 293/575 (50%), Positives = 405/575 (69%), Gaps = 8/575 (1%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLDRIRK+ V AKEAGGITQHIGATEVP++V+K+I + WK E+K+PGLLFIDTP
Sbjct: 27 TTLLDRIRKSKVVAKEAGGITQHIGATEVPLDVIKQICKDI---WKVEVKIPGLLFIDTP 83
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH+AFT+LR RGG+LADLA+L+VDINEGF+PQT E++ ILR ++TPFVVAANKIDRI GW
Sbjct: 84 GHKAFTNLRRRGGALADLAILIVDINEGFKPQTEEALSILRTFKTPFVVAANKIDRIPGW 143
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
ED PF+ + Q+ A Q LE +L+ LI + Y+ GF A RFDR+ +FTR +A+VPIS
Sbjct: 144 QSHEDTPFMKSYAMQEDFAKQNLENRLYNLIAELYQRGFSAERFDRISDFTRTVAVVPIS 203
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G GI ELL+++ GL+QRYLE+ L++ +EG RGT+LEV+EE GLG T D I+YDGTL
Sbjct: 204 ALKGEGIPELLLILVGLAQRYLEKNLRLHIEGKGRGTVLEVKEERGLGVTCDAILYDGTL 263
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
D I + GKD+ IVT ++A+LKP P+ E+R +F V VTAAAG+KI AP LE
Sbjct: 264 KVGDRIAIAGKDEVIVTNVKAILKPPPVREMR-VESKFQSVKSVTAAAGIKIVAPNLENV 322
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEI 774
LAGS + ED++K ++ + ++ E + I TD+ GV++K DTLGSLEAL EL+++ I
Sbjct: 323 LAGSEFEVVESEEDIKKFEERVRKEYEEIAIRTDEEGVVLKTDTLGSLEALINELRQEGI 382
Query: 775 PIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIY 834
PI+KA+VG+V K DV++A + K+E K V+L FNVK+ EE AK V+IF +IY
Sbjct: 383 PIKKAEVGDVDKRDVVDASANKDELNK--VVLAFNVKLLPGVEEEAKKYGVRIFSHEIIY 440
Query: 835 KLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKP 894
LIE + +W +EE ++R+ + + PG I+L + ++FRRS PAIVG+ V+ G ++
Sbjct: 441 TLIESFVKWREEERLARERQKVEALIKPGKIKLL--KEFIFRRSKPAIVGVRVLAGELRR 498
Query: 895 GVTLIKQNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIEGAIVGRHIHPGETLYVDLSRD 954
GV LIK +G KVG +R+++ + + A G +AIAIE +GR + E LYVD+
Sbjct: 499 GVDLIKPDGTKVGAVRTMQKEGKNVAIASAGDELAIAIEDVTIGRQLEGDEELYVDVPER 558
Query: 955 DAITLLKHLRDTLEDTDIKALKMIAKVKAKEDPFW 989
A + + L D+L++ +A K ++K K++PFW
Sbjct: 559 HAKVIERDLLDSLDEETKRAFKEFLEIKRKDNPFW 593
>gb|AAK40570.1| Translation initiation factor IF2 homolog (infB) [Sulfolobus
solfataricus]
Length = 600
Score = 543 bits (1385), Expect = e-153
Identities = 277/576 (48%), Positives = 400/576 (69%), Gaps = 8/576 (1%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD+IR T V KE G +TQ +GA+ VP +++K+A PL K+ ++++PGLLFIDTP
Sbjct: 26 TTLLDKIRGTTVVKKEPGEMTQEVGASFVPSYIIEKLAEPLKKVIPIKLQIPGLLFIDTP 85
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE F++LR RGGS+AD+A+LVVDI EG Q Q+IESI+ILR+ + PF++AANKID+I GW
Sbjct: 86 GHEYFSNLRRRGGSVADIAILVVDITEGLQKQSIESIQILRERKVPFLIAANKIDKIPGW 145
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
D PFL +I+KQ L+ ++ L+ + GF + R+DR+++FT+ +AIVP+S
Sbjct: 146 KSNNDIPFLASIEKQRNDVKVYLDNLVYNLVSQLANLGFSSERYDRIKDFTKTVAIVPVS 205
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G G+A+LL L+AGL+QRYLE +LK EGPA+G ILEV+E+PGLGHTIDVIIYDG L
Sbjct: 206 AKTGEGVADLLALLAGLTQRYLETRLKF-AEGPAKGVILEVKEDPGLGHTIDVIIYDGVL 264
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
K+DTI++GG + I+TK+R + P+PL +++ ++ +DEV AAAGVKI+AP LEEA
Sbjct: 265 KKNDTIILGGINGIIITKVRGIFVPRPLQDMKLSKYDLTPIDEVYAAAGVKISAPNLEEA 324
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEI 774
LAGSP+ VE+ KQ+I E+I+ V + +D G+I+KAD+LG+LEAL LQ + I
Sbjct: 325 LAGSPIYVVEDESKVERYKQQIEEEIKEVRLYSDIDGIILKADSLGTLEALVSALQREGI 384
Query: 775 PIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIY 834
PIR AD+G +SK DV+EA V + +YG+I F VK+ + + +KI +IY
Sbjct: 385 PIRLADIGPISKRDVIEASIVAQRSKEYGIIAAFRVKLLQGID----TSGIKILYNEIIY 440
Query: 835 KLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKP 894
+LIED ++ + + E +KR + PG I++ P YVFRRS+P +VGIEVI G I+P
Sbjct: 441 QLIEDIKKHINDVREAEKRRTFDTLILPGKIKILPG--YVFRRSDPVVVGIEVIGGIIRP 498
Query: 895 GVTLIKQNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIEGAI-VGRHIHPGETLYVDLSR 953
LIK++G++VG + I+ + L+ A KG VAI+I+G I +GRH++ G+ LY D+ +
Sbjct: 499 KYPLIKEDGRRVGEVLQIQDNKKSLERATKGMEVAISIKGNIMIGRHVNEGDVLYTDVPK 558
Query: 954 DDAITLLKHLRDTLEDTDIKALKMIAKVKAKEDPFW 989
+D L+ ++ D + +K I ++K KEDP +
Sbjct: 559 EDLEILVNKYPSSITDDMREVIKEIIRIKRKEDPLY 594
>gb|AAG20168.1| (AE005094) bacterial-like IF2; InfB [Halobacterium sp. NRC-1]
Length = 600
Score = 493 bits (1255), Expect = e-138
Identities = 258/578 (44%), Positives = 379/578 (64%), Gaps = 11/578 (1%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD+IR + V EAG ITQHIGAT VP++ V ++AG L+ E LPGLLFIDTP
Sbjct: 29 TSLLDKIRGSAVIEGEAGAITQHIGATAVPLDTVSEVAGSLVD--PTEFDLPGLLFIDTP 86
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH +F++LR+RGG+LAD+A+LVVD+N+GFQPQT E+I IL+ TPFVVAANKID GW
Sbjct: 87 GHHSFSTLRSRGGALADIAILVVDVNDGFQPQTEEAIRILKDTGTPFVVAANKIDTTPGW 146
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
D P Q R +L+ L+ELIG+ + GF ++ + RVQNF + + ++P+S
Sbjct: 147 NPNPDAPVQGTYDDQSDRVRSDLDDALYELIGEMSDAGFSSDLYWRVQNFQKNVGVIPVS 206
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A+ G G+ +LL ++ GL+QRY++ ++++ ++GP GT+LEV++E G G T+DVI+YDGT+
Sbjct: 207 AETGEGVPDLLTVLMGLAQRYMKSEMEVTIDGPGAGTVLEVKDEQGFGTTVDVILYDGTI 266
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
DT+VVG + + IVT +RALLKP L E+R + RF VD + AAAG+K+AAP L++A
Sbjct: 267 RSGDTVVVGAQPEPIVTDVRALLKPGDLAEMRTEK-RFGNVDRMQAAAGLKVAAPDLDDA 325
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEI 774
+AG+P I DV E+ ++ V + T + G++VKADTLGSLEAL L+E EI
Sbjct: 326 MAGAP-IRVVGDRDVADVVTEVEAELAEVAVETGEEGIVVKADTLGSLEALVSALEEAEI 384
Query: 775 PIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIY 834
P+ A+VG+V+ DV A +V E K+ V+LGFNV V A E A+ + V++F +VIY
Sbjct: 385 PVMSAEVGDVAPRDVAMATTVDSE--KHRVLLGFNVDVLPAAAENAERESVRVFNSDVIY 442
Query: 835 KLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKP 894
+L+EDYE +V +E ++K + + P R+ D +VFR+++PA+VG+EV+ G +K
Sbjct: 443 QLVEDYEAFVDAQEREQKEAVFDNIVRPARFRILKD--HVFRQNDPAVVGVEVVSGTLKR 500
Query: 895 GVTLIKQNG---QKVGVIRSIKSRDEFLQEAKKGQAVAIAIEGAIVGRHIHPGETLYVDL 951
+ G + G+++ I+ + E + EA+ G V+++I+G VGR I G+ L+VDL
Sbjct: 501 NTPVGGIEGNDLDRAGIVKGIQDQGEDVDEARAGNRVSVSIDGPTVGRDIKEGDELWVDL 560
Query: 952 SRDDAITLLKHLRDTLEDTDIKALKMIAKVKAKEDPFW 989
A L + L L + +ALK + K DPFW
Sbjct: 561 PEKHAKVLDQELTSDLPADEREALKSYLDIMRKRDPFW 598
>sp|P95691|IF2P_SULAC PROBABLE TRANSLATION INITIATION FACTOR IF-2
>gi|1785960|gb|AAB41057.1| (U43413) InfB homolog;
similar to Bacillus subtilis translation initiation
factor IF2 (InfB), Swiss-Prot Accession Number P17889;
Method: conceptual translation supplied by author
[Sulfolobus acidocaldarius]
Length = 534
Score = 478 bits (1218), Expect = e-133
Identities = 249/506 (49%), Positives = 354/506 (69%), Gaps = 7/506 (1%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD+IR T V KE G +TQ +GA+ VP V++KI+ PL K + ++++PGLLFIDTP
Sbjct: 25 TTLLDKIRGTAVVKKEPGEMTQEVGASFVPTSVIEKISEPLKKSFPIKLEIPGLLFIDTP 84
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE F++LR RGGS+AD+A+LVVDI EG Q QT+ESIEIL+ + PF+VAANKIDRI GW
Sbjct: 85 GHELFSNLRKRGGSVADIAILVVDIVEGIQKQTLESIEILKSRKVPFIVAANKIDRINGW 144
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
++ FL +I KQ+QR L+ +++ L+ + E GF A RFDR+++FTR +A++P+S
Sbjct: 145 KAQDTHSFLESINKQEQRVRDNLDKQVYNLVIQLAEQGFNAERFDRIRDFTRTVAVIPVS 204
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G GIAE+L ++AGL+Q Y++ KLK EGPA+G ILEV+E GLG+T DV+IY+G L
Sbjct: 205 AKTGEGIAEVLAILAGLTQNYMKNKLKF-AEGPAKGVILEVKELQGLGYTADVVIYEGIL 263
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
K+D IV+ G D IVTK+RA+L P+PL +I + +DEV AA+GVK+ A LE A
Sbjct: 264 RKNDIIVLAGIDGPIVTKVRAILVPRPLQDIELAKSDLAQIDEVYAASGVKVYAQNLETA 323
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKV-GVIVKADTLGSLEALSKELQEKE 773
LAGSP+ A E+VEK K+ I E++ V V G+IVKAD+LGSLEA+ L+ +
Sbjct: 324 LAGSPIYVAENNEEVEKYKKIIQEEVSAVRYYNSSVYGIIVKADSLGSLEAIVSSLERRN 383
Query: 774 IPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVI 833
IPIR AD+G +SK D+ EA V E+ +YG+I F VK E K +K+ ++I
Sbjct: 384 IPIRLADIGPISKRDITEAEIVAEKAKEYGIIAAFRVKPLSGIEIPEK---IKLISDDII 440
Query: 834 YKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIK 893
Y+L+++ E+++++ +E +KR+ L + PG I++ P YVFRRS+P IVG+EV+ G I+
Sbjct: 441 YQLMDNIEKYIEDIKESEKRKTLETIVLPGKIKIIPG--YVFRRSDPVIVGVEVLGGIIR 498
Query: 894 PGVTLIKQNGQKVGVIRSIKSRDEFL 919
P LIK++G++VG + I+ + L
Sbjct: 499 PKYGLIKKDGRRVGEVLQIQDNKKSL 524
>sp|O93625|IF2P_HALHA PROBABLE TRANSLATION INITIATION FACTOR IF-2
>gi|11277727|pir||T43849 translation initiation factor
aIF-2 [similarity] - Halobacterium salinarum
>gi|4001704|dbj|BAA35081.1| (AB015763) bacterial
initiation factor [Halobacterium halobium]
Length = 583
Score = 445 bits (1133), Expect = e-124
Identities = 242/556 (43%), Positives = 355/556 (63%), Gaps = 11/556 (1%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD+IR + V EAG ITQHIGAT VP ++ G + E LPGLLFIDTP
Sbjct: 29 TSLLDKIRGSAVIEGEAGAITQHIGATAVPAG--HRLGGRRQLVDPTEFDLPGLLFIDTP 86
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH +F GG+LAD+A+LVVD+NE FQPQT E+I IL+ TPFVVAANKID GW
Sbjct: 87 GHHSFFEHALGGGALADIAILVVDVNERFQPQTEEAIRILKDTGTPFVVAANKIDTTPGW 146
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
D P Q + +L+ L+ELIG+ + GF ++ + RVQNF + + ++P+S
Sbjct: 147 NPNPDAPVQGTYDDQSEPVRSDLDDALYELIGEMSDAGFSSDLYWRVQNFQKNVGVIPVS 206
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A+ G G+ +LL ++ GL+QRY++ ++++ ++GP GT+LEV++E G G T+DVI+YDGT+
Sbjct: 207 AETGEGVPDLLTVLMGLAQRYMKSEMEVTIDGPGAGTVLEVKDEQGFGTTVDVILYDGTI 266
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
DT+VVG + + IVT +RALLKP L E+R + RF VD + AAAG+K+AAP L++A
Sbjct: 267 RSGDTVVVGAQPEPIVTDVRALLKPGDLAEMRTEK-RFGNVDRMQAAAGLKVAAPDLDDA 325
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEI 774
+AG+ A DV E+ ++ V + T + G++VKADTLGSLEAL L+E EI
Sbjct: 326 MAGAR-SAWSGDRDVADVVTEVEAELAEVAVETGEEGIVVKADTLGSLEALVSALEEAEI 384
Query: 775 PIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIY 834
P+ A+VG+V+ DV A +V E K+ V+LGFNV V A E A+ + V++F +VIY
Sbjct: 385 PVMSAEVGDVAPRDVAMATTVDSE--KHRVLLGFNVDVLPAAAENAERESVRVFNSDVIY 442
Query: 835 KLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKP 894
+L+EDYE +V +E ++K + + P R+ D +VFR+++PA+VG+EV+ G +K
Sbjct: 443 QLVEDYEAFVDAQEREQKEAVFDNIVRPARFRILKD--HVFRQNDPAVVGVEVVSGTLKR 500
Query: 895 GVTLIKQNG---QKVGVIRSIKSRDEFLQEAKKGQAVAIAIEGAIVGRHIHPGETLYVDL 951
+ G + G+++ I+ + E + EA+ G V+++I+G VGR I G+ L+VDL
Sbjct: 501 NTPVGGIEGNDLDRAGIVKGIQDQGEDVDEARAGNRVSVSIDGPTVGRDIKEGDELWVDL 560
Query: 952 SRDDAITLLKHLRDTL 967
A L + L L
Sbjct: 561 PEKHAKVLDQELTSDL 576
>emb|CAC12239.1| (AL445066) translation initiation factor IF-2 related protein
[Thermoplasma acidophilum]
Length = 589
Score = 420 bits (1068), Expect = e-116
Identities = 235/577 (40%), Positives = 373/577 (63%), Gaps = 23/577 (3%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD IR T+VA+KE GGITQ I AT V I + K KL +K+PGLLFIDTP
Sbjct: 30 TTLLDLIRGTSVASKEPGGITQRIAATTVDISRILKETE---KLNTKGLKIPGLLFIDTP 86
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AF+++RARGG+LADLA+LV+DINEG PQT+ESI+IL+K++TPF++AANKID I +
Sbjct: 87 GHVAFSNMRARGGALADLAILVIDINEGIMPQTVESIDILKKFKTPFIIAANKIDLIPFF 146
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+ F I+KQ Q V EL+ +++ ++ K YEFG ++RFDR+ +FT+ +AIVP+S
Sbjct: 147 TDVKTNLFTEFIRKQRQEYVNELDNRIYSIMNKLYEFGLNSDRFDRISDFTKTIAIVPVS 206
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKI-EVEGPARGTILEVREEPGLGHTIDVIIYDGT 653
AK IG+ E+L+++AGL+QR+LE +++ ++ G A TI+EVR+E G T+D ++Y GT
Sbjct: 207 AKKNIGVPEILMVLAGLAQRFLEREIEYRDINGHA--TIIEVRKEESAGITLDAVLYQGT 264
Query: 654 LHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEE 713
+ D+I V K+ VTK++AL ++ + R V +V+AA G+++ +
Sbjct: 265 ISVGDSIAVNTKNGPAVTKVKALF----VNTGKGQR-ALKEVKKVSAAEGIRVLISDKID 319
Query: 714 ALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKE 773
++GSP+I +++++ +EI E+ +V I + G+ VKA+ +GSLEA+S EL ++
Sbjct: 320 VISGSPMIV--VRDNLDQVMKEI-EEESKVDIPLSEEGIYVKAEAIGSLEAISYELNKQG 376
Query: 774 IPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVI 833
I I++A VG+++K D+M+ ++ +P +I+GFNV V +A + + DV I G++I
Sbjct: 377 IKIKQAQVGDITKRDIMDVSTL--PDPINRIIVGFNVSVLPEARDAMSSSDVSIVTGDII 434
Query: 834 YKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIK 893
YK++ED ++ + E ++ + + P IR+ P +Y+FR S P IVG+ V G+IK
Sbjct: 435 YKIVEDTQKVMDERKKMLLQGRKMSMPVPSRIRILP--QYIFRASKPVIVGVRVETGQIK 492
Query: 894 PGVTLIKQNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIEGAIVGRHIHPGETLYVDLSR 953
G LI+ +G+ G I+SI++ D ++ VA+AI+ + R I P + LYVD++
Sbjct: 493 VGDNLIRGDGKYAGTIKSIRNEDVSVRYQDAPAEVAVAIDNVTLNRQIFPDDVLYVDITE 552
Query: 954 DDAITLLKHLRDT-LEDTDIKALKMIAKVKAKEDPFW 989
+ ++K LR +E + L+ I ++K K++PFW
Sbjct: 553 N----VVKELRRAPMEKEIMDTLEEIIRIKRKDNPFW 585
>gb|AAF04442.1|AC010718_11 (AC010718) putative translation initiation factor IF-2; 73082-68138
[Arabidopsis thaliana]
Length = 1280
Score = 374 bits (950), Expect = e-102
Identities = 229/580 (39%), Positives = 344/580 (58%), Gaps = 22/580 (3%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T LLD IR TNV EAGGITQ IGAT P E +++ L A++K+PGLL IDTP
Sbjct: 705 TKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKA--DAKLKVPGLLVIDTP 762
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE+FT+LR+RG SL DLA+LVVDI G +PQTIES+ +LR T F+VA NK+DR+ GW
Sbjct: 763 GHESFTNLRSRGSSLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIVALNKVDRLYGW 822
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
++ P + +K+Q++ + E +L +I +F E G + + ++ +IVP S
Sbjct: 823 KTCKNAPIVKAMKQQNKDVINEFNLRLKNIINEFQEQGLNTELYYKNKDMGDTFSIVPTS 882
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G G+ +LL+ + +Q+ + EKL E + T+LEV+ G G TIDV++ +G L
Sbjct: 883 AISGEGVPDLLLWLVQWAQKTMVEKLTYVDE--VQCTVLEVKVIEGHGTTIDVVLVNGEL 940
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
H+ D IVV G IVT IRALL P P+ E+R + + + E+ AA G+KI A GLE A
Sbjct: 941 HEGDQIVVCGLQGPIVTTIRALLTPHPMKELR-VKGTYLHYKEIKAAQGIKITAQGLEHA 999
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDK--VGVIVKADTLGSLEALSKELQEK 772
+AG+ + +D+E K+ +E +E V+ DK GV V+A TLGSLEAL + L+
Sbjct: 1000 IAGTALHVVGPDDDIEAIKESAMEDMESVLSRIDKSGEGVYVQASTLGSLEALLEYLKSP 1059
Query: 773 --EIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVG 830
+IP+ +G V K DVM+A + E + +Y IL F+VKV +A E+A VKIF
Sbjct: 1060 AVKIPVSGIGIGPVHKKDVMKAGVMLERKKEYATILAFDVKVTTEARELADEMGVKIFCA 1119
Query: 831 NVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEG 890
++IY L + ++ +++ +E+KK+E + FP V+++ P+ VF + +P ++G++VIEG
Sbjct: 1120 DIIYHLFDLFKAYIENIKEEKKKESADEAVFPCVLQILPN--CVFNKKDPIVLGVDVIEG 1177
Query: 891 RIKPGVTLIKQNGQ--KVGVIRSIKSRDEFLQEAKKGQAVAIAIEGA------IVGRHIH 942
+K G + + +G I SI++ + + AKKG VAI I G+ + GRH
Sbjct: 1178 ILKIGTPICVPGREFIDIGRIASIENNHKPVDYAKKGNKVAIKIVGSNAEEQKMFGRHFD 1237
Query: 943 PGETLYVDLSRDDAITLLKHLRDTLEDTDIKALKMIAKVK 982
+ L +SR L + RD L ++ K++ K+K
Sbjct: 1238 MEDELVSHISRRSIDILKSNYRDEL---SLEEWKLVVKLK 1274
>sp|O60841|IF2P_HUMAN TRANSLATION INITIATION FACTOR IF-2 >gi|3882203|dbj|BAA34461.1|
(AB018284) KIAA0741 protein [Homo sapiens]
Length = 1220
Score = 373 bits (948), Expect = e-102
Identities = 212/577 (36%), Positives = 340/577 (58%), Gaps = 15/577 (2%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T +LD++R T+V EAGGITQ IGAT VP+E + + + + +++PG+L IDTP
Sbjct: 645 TKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENVRIPGMLIIDTP 704
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE+F++LR RG SL D+A+LVVDI G +PQTIESI +L+ + PF+VA NKIDR+ W
Sbjct: 705 GHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINLLKSKKCPFIVALNKIDRLYDW 764
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
D +KKQ + E E + +I +F + G A F ++ +++VP S
Sbjct: 765 KKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAALFYENKDPRTFVSLVPTS 824
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G G+ L+ L+ L+Q L ++L E R ++EV+ PG+G TIDVI+ +G L
Sbjct: 825 AHTGDGMGSLIYLLVELTQTMLSKRLAHCEE--LRAQVMEVKALPGMGTTIDVILINGRL 882
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
+ DTI+V G + IVT+IR LL P P+ E+R + +++ EV AA GVKI LE+
Sbjct: 883 KEGDTIIVPGVEGPIVTQIRGLLLPPPMKELR-VKNQYEKHKEVEAAQGVKILGKDLEKT 941
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVV--ISTDKVGVIVKADTLGSLEALSKELQEK 772
LAG P++ A +++ K E++ ++++ + I ++ GV V+A TLGSLEAL + L+
Sbjct: 942 LAGLPLLVAYKEDEIPVLKDELIHELKQTLNAIKLEEKGVYVQASTLGSLEALLEFLKTS 1001
Query: 773 EIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNV 832
E+P ++G V K DVM+A + E +P+Y VIL F+V++ DA+E+A + V+IF +
Sbjct: 1002 EVPYAGINIGPVHKKDVMKASVMLEHDPQYAVILAFDVRIERDAQEMADSLGVRIFSAEI 1061
Query: 833 IYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRI 892
IY L + + ++ ++ +++K+ E FP I++ P +Y+F +P ++G+ V G++
Sbjct: 1062 IYHLFDAFTKYRQDYKKQKQEEFKHIAVFPCKIKILP--QYIFNSRDPIVMGVTVEAGQV 1119
Query: 893 KPGVTLI--KQNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIE------GAIVGRHIHPG 944
K G + +N +G++ SI+ + + AKKGQ V + IE + GRH
Sbjct: 1120 KQGTPMCVPSKNFVDIGIVTSIEINHKQVDVAKKGQEVCVKIEPIPGESPKMFGRHFEAT 1179
Query: 945 ETLYVDLSRDDAITLLKHLRDTLEDTDIKALKMIAKV 981
+ L +SR L RD ++ +D + + + KV
Sbjct: 1180 DILVSKISRQSIDALKDWFRDEMQKSDWQLIVELKKV 1216
>pir||T43483 translation initiation factor IF-2 homolog [similarity] - human
(fragment) >gi|6599138|emb|CAB63717.1| (AL133563)
hypothetical protein [Homo sapiens]
Length = 1132
Score = 373 bits (948), Expect = e-102
Identities = 212/577 (36%), Positives = 340/577 (58%), Gaps = 15/577 (2%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T +LD++R T+V EAGGITQ IGAT VP+E + + + + +++PG+L IDTP
Sbjct: 557 TKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENVRIPGMLIIDTP 616
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE+F++LR RG SL D+A+LVVDI G +PQTIESI +L+ + PF+VA NKIDR+ W
Sbjct: 617 GHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINLLKSKKCPFIVALNKIDRLYDW 676
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
D +KKQ + E E + +I +F + G A F ++ +++VP S
Sbjct: 677 KKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAALFYENKDPRTFVSLVPTS 736
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G G+ L+ L+ L+Q L ++L E R ++EV+ PG+G TIDVI+ +G L
Sbjct: 737 AHTGDGMGSLIYLLVELTQTMLSKRLAHCEE--LRAQVMEVKALPGMGTTIDVILINGRL 794
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
+ DTI+V G + IVT+IR LL P P+ E+R + +++ EV AA GVKI LE+
Sbjct: 795 KEGDTIIVPGVEGPIVTQIRGLLLPPPMKELR-VKNQYEKHKEVEAAQGVKILGKDLEKT 853
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVV--ISTDKVGVIVKADTLGSLEALSKELQEK 772
LAG P++ A +++ K E++ ++++ + I ++ GV V+A TLGSLEAL + L+
Sbjct: 854 LAGLPLLVAYKEDEIPVLKDELIHELKQTLNAIKLEEKGVYVQASTLGSLEALLEFLKTS 913
Query: 773 EIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNV 832
E+P ++G V K DVM+A + E +P+Y VIL F+V++ DA+E+A + V+IF +
Sbjct: 914 EVPYAGINIGPVHKKDVMKASVMLEHDPQYAVILAFDVRIERDAQEMADSLGVRIFSAEI 973
Query: 833 IYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRI 892
IY L + + ++ ++ +++K+ E FP I++ P +Y+F +P ++G+ V G++
Sbjct: 974 IYHLFDAFTKYRQDYKKQKQEEFKHIAVFPCKIKILP--QYIFNSRDPIVMGVTVEAGQV 1031
Query: 893 KPGVTLI--KQNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIE------GAIVGRHIHPG 944
K G + +N +G++ SI+ + + AKKGQ V + IE + GRH
Sbjct: 1032 KQGTPMCVPSKNFVDIGIVTSIEINHKQVDVAKKGQEVCVKIEPIPGESPKMFGRHFEAT 1091
Query: 945 ETLYVDLSRDDAITLLKHLRDTLEDTDIKALKMIAKV 981
+ L +SR L RD ++ +D + + + KV
Sbjct: 1092 DILVSKISRQSIDALKDWFRDEMQKSDWQLIVELKKV 1128
>emb|CAB44357.1| (AJ006776) IF2 protein [Homo sapiens]
Length = 1220
Score = 372 bits (945), Expect = e-101
Identities = 212/577 (36%), Positives = 339/577 (58%), Gaps = 15/577 (2%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T +LD++R T+V EAGGITQ IGAT VP+E + + + + +++PG+L IDTP
Sbjct: 645 TKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENVRIPGMLIIDTP 704
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE+F++LR RG SL D+A+LVVDI G +PQTIESI +L+ + PF+VA NKIDR+ W
Sbjct: 705 GHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINLLKSKKCPFIVALNKIDRLYDW 764
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
D +KKQ + E E + +I +F + G A F ++ +++VP S
Sbjct: 765 KKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAALFYENKDPRTFVSLVPTS 824
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G G+ L+ L+ L+Q L ++L E R ++EV+ PG+G TIDVI+ +G L
Sbjct: 825 AHTGDGMGSLIYLLVELTQTMLSKRLAHCEE--LRAQVMEVKALPGMGTTIDVILINGRL 882
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
+ DTI+V G IVT+IR LL P P+ E+R + +++ EV AA GVKI LE+
Sbjct: 883 KEGDTIIVPGVKGPIVTQIRGLLLPPPMKELR-VKNQYEKHKEVEAAQGVKILGKDLEKT 941
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVV--ISTDKVGVIVKADTLGSLEALSKELQEK 772
LAG P++ A +++ K E++ ++++ + I ++ GV V+A TLGSLEAL + L+
Sbjct: 942 LAGLPLLVAYKEDEIPVLKDELIHELKQTLNAIKLEEKGVYVQASTLGSLEALLEFLKTS 1001
Query: 773 EIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNV 832
E+P ++G V K DVM+A + E +P+Y VIL F+V++ DA+E+A + V+IF +
Sbjct: 1002 EVPYAGINIGPVHKKDVMKASVMLEHDPQYAVILAFDVRIERDAQEMADSLGVRIFSAEI 1061
Query: 833 IYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRI 892
IY L + + ++ ++ +++K+ E FP I++ P +Y+F +P ++G+ V G++
Sbjct: 1062 IYHLFDAFTKYRQDYKKQKQEEFKHIAVFPCKIKILP--QYIFNSRDPIVMGVTVEAGQV 1119
Query: 893 KPGVTLI--KQNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIE------GAIVGRHIHPG 944
K G + +N +G++ SI+ + + AKKGQ V + IE + GRH
Sbjct: 1120 KQGTPMCVPSKNFVDIGIVTSIEINHKQVDVAKKGQEVCVKIEPIPGESPKMFGRHFEAT 1179
Query: 945 ETLYVDLSRDDAITLLKHLRDTLEDTDIKALKMIAKV 981
+ L +SR L RD ++ +D + + + KV
Sbjct: 1180 DILVSKISRQSIDALKDWFRDEMQKSDWQLIVELKKV 1216
>gb|AAF36532.1|AF143207_1 (AF143207) IF2 protein [Drosophila melanogaster]
Length = 1144
Score = 371 bits (943), Expect = e-101
Identities = 220/567 (38%), Positives = 333/567 (57%), Gaps = 15/567 (2%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T +LD++R+T+V EAGGITQ IGAT VPIE +K+ + E +LPGLL IDTP
Sbjct: 569 TKILDKLRRTHVQDSEAGGITQQIGATNVPIEAIKEQTKYVKAAAGFEHRLPGLLIIDTP 628
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE+F++LR RG SL D+A+LVVDI G +PQTIESI++L+K + PF+VA NKIDR+ W
Sbjct: 629 GHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESIQLLKKKKCPFIVALNKIDRLYDW 688
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+K+Q E + + ++I +F E G A F + +++VP S
Sbjct: 689 KQLARRDVRDVLKEQQSNTQLEFQQRTKDVILQFAEQGLNAALFYENTDPKTYISLVPTS 748
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G G+ LL +IA Q L ++L E + T+LEV+ PGLG TID I+ +G L
Sbjct: 749 AISGEGMGNLLFMIADFCQNMLAKRLMYSEE--LQATVLEVKALPGLGTTIDAILINGKL 806
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
+ T+VV G D IVT+IR+LL P+P+ E+R +Y EV AA GVKIAA LE+A
Sbjct: 807 REGQTMVVAGTDGPIVTQIRSLLMPQPMKELRVKNAYVEY-KEVKAAQGVKIAAKDLEKA 865
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVV--ISTDKVGVIVKADTLGSLEALSKELQEK 772
+AG ++ A P++VE +E+ +++ + I + GV V+A TLGSLEAL + L+
Sbjct: 866 IAGINLLIAHKPDEVEICTEEVARELKSALSHIKLAQTGVHVQASTLGSLEALLEFLRTS 925
Query: 773 EIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNV 832
+IP +G V K DVM+A ++ E E +Y IL F+VK+ +A+E+A + VKIF ++
Sbjct: 926 KIPYSAIRIGPVVKRDVMKASTMLEHEAQYATILAFDVKIEREAQEMADSLGVKIFQADI 985
Query: 833 IYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRI 892
IY L + + + +E ++KK+ E S FP +R+ P ++VF +P ++G+ V G +
Sbjct: 986 IYHLFDKFTAYREELKQKKREEFRSVAVFPCKLRILP--QFVFNSRDPIVMGVMVENGIV 1043
Query: 893 KPGVTLIKQNGQ--KVGVIRSIKSRDEFLQEAKKGQAVAIAIE------GAIVGRHIHPG 944
K G + + + +G++ SI+S + ++ A+KGQ + + I+ + GRH
Sbjct: 1044 KVGTPICVPSKEFVDIGIVTSIESNHKQIEFARKGQEICVKIDPIPGESPKMFGRHFEAD 1103
Query: 945 ETLYVDLSRDDAITLLKHLRDTLEDTD 971
+ L +SR + RD L D
Sbjct: 1104 DMLISKISRQSIDACKDYFRDDLIKAD 1130
>sp|Q10251|IF2P_SCHPO PROBABLE TRANSLATION INITIATION FACTOR IF-2 >gi|7493514|pir||T38913
translation initiation factor if-2 - fission yeast
(Schizosaccharomyces pombe) >gi|1204225|emb|CAA93574.1|
(Z69728) translation initiation factor if-2
[Schizosaccharomyces pombe]
Length = 1079
Score = 371 bits (942), Expect = e-101
Identities = 220/562 (39%), Positives = 341/562 (60%), Gaps = 24/562 (4%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T LLD +R++NV EAGGITQ IGAT PIE +K+ + K K + +PGLL IDTP
Sbjct: 498 TKLLDNLRRSNVQEGEAGGITQQIGATYFPIESIKQKTKVVNKKGKLQYNIPGLLIIDTP 557
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE+FT+LR+RG SL ++A+LV+DI G +PQTIESI +LR +TPFVVA NK+DR+ GW
Sbjct: 558 GHESFTNLRSRGTSLCNIAILVIDIMHGLEPQTIESIRLLRDQKTPFVVALNKVDRLYGW 617
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+D ++ KQ + +E ++ +I + E G A + +N R +++VP S
Sbjct: 618 HSIKDNAIQDSLSKQKKAIQREFRDRVESIILQLNEQGLNAALYFENKNLGRYVSLVPTS 677
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A+ G G+ +L+ L+ L+Q + +++K T+LEV+ GLG TIDVI+ +G L
Sbjct: 678 AQSGEGVPDLVALLISLTQTRMSDRIKYIT--TLECTVLEVKVIEGLGATIDVILSNGVL 735
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
H+ D IV+ G I+T +RALL P+PL E+R + + + E+ AA GVKI A LE+A
Sbjct: 736 HEGDRIVLCGMGGPIITTVRALLTPQPLKEMR-VKSAYVHHKEIKAAMGVKICANDLEKA 794
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVV--ISTDKVGVIVKADTLGSLEALSKELQEK 772
+AGS ++ +D E +EI+E +E ++ I T +GV V+A TLGSLEAL + L++
Sbjct: 795 VAGSRLLVVGPDDDEEDLAEEIMEDLENLLGRIDTSGIGVSVQASTLGSLEALLEFLKQM 854
Query: 773 EIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNV 832
+IP+ ++G V K DVM ++ E+ +Y ++L F+VKV+ DAE++A+ VKIF NV
Sbjct: 855 KIPVASVNIGPVYKKDVMRCATMLEKAKEYALMLCFDVKVDRDAEDLAEQLGVKIFSANV 914
Query: 833 IYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEG-- 890
IY L + + K+ E+K+ E FP V++ F + +P I+G++V+EG
Sbjct: 915 IYHLFDAFTAHQKKILEQKREESSDVAVFPCVLKTVA----AFNKRDPIILGVDVVEGVL 970
Query: 891 RIKPGVTLIKQ--NGQ----KVGVIRSIKSRDEFLQEAKKGQA---VAIAIEGA----IV 937
RI + +KQ NG+ ++G + S++ + + + KKGQA VA+ +E + +
Sbjct: 971 RINTPIVAVKQLPNGEPQIIELGRVASLEMNHKPVDKVKKGQAGAGVAMKLESSGSQILF 1030
Query: 938 GRHIHPGETLYVDLSRDDAITL 959
GR + + LY ++R +L
Sbjct: 1031 GRQVTESDALYSHITRQSIDSL 1052
>gi|7706232 KIAA0741 gene product; translation initiation factor IF2 [Homo
sapiens] >gi|4322304|gb|AAD16006.1| (AF078035)
translation initiation factor IF2 [Homo sapiens]
Length = 1220
Score = 370 bits (940), Expect = e-101
Identities = 211/577 (36%), Positives = 339/577 (58%), Gaps = 15/577 (2%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T +LD++R T+V EAGGITQ I AT VP+E + + + + +++PG+L IDTP
Sbjct: 645 TKILDKLRHTHVQDGEAGGITQQIWATNVPLEAINEQTKMIKNFDRENVRIPGMLIIDTP 704
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE+F++LR RG SL D+A+LVVDI G +PQTIESI +L+ + PF+VA NKIDR+ W
Sbjct: 705 GHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINLLKSKKCPFIVALNKIDRLYDW 764
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
D +KKQ + E E + +I +F + G A F ++ +++VP S
Sbjct: 765 KKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAALFYENKDPRTFVSLVPTS 824
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G G+ L+ L+ L+Q L ++L E R ++EV+ PG+G TIDVI+ +G L
Sbjct: 825 AHTGDGMGSLIYLLVELTQTMLSKRLAHCEE--LRAQVMEVKALPGMGTTIDVILINGRL 882
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
+ DTI+V G + IVT+IR LL P P+ E+R + +++ EV AA GVKI LE+
Sbjct: 883 KEGDTIIVPGVEGPIVTQIRGLLLPPPMKELR-VKNQYEKHKEVEAAQGVKILGKDLEKT 941
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVV--ISTDKVGVIVKADTLGSLEALSKELQEK 772
LAG P++ A +++ K E++ ++++ + I ++ GV V+A TLGSLEAL + L+
Sbjct: 942 LAGLPLLVAYKEDEIPVLKDELIHELKQTLNAIKLEEKGVYVQASTLGSLEALLEFLKTS 1001
Query: 773 EIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNV 832
E+P ++G V K DVM+A + E +P+Y VIL F+V++ DA+E+A + V+IF +
Sbjct: 1002 EVPYAGINIGPVHKKDVMKASVMLEHDPQYAVILAFDVRIERDAQEMADSLGVRIFSAEI 1061
Query: 833 IYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRI 892
IY L + + ++ ++ +++K+ E FP I++ P +Y+F +P ++G+ V G++
Sbjct: 1062 IYHLFDAFTKYRQDYKKQKQEEFKHIAVFPCKIKILP--QYIFNSRDPIVMGVTVEAGQV 1119
Query: 893 KPGVTLI--KQNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIE------GAIVGRHIHPG 944
K G + +N +G++ SI+ + + AKKGQ V + IE + GRH
Sbjct: 1120 KQGTPMCVPSKNFVDIGIVTSIEINHKQVDVAKKGQEVCVKIEPIPGESPKMFGRHFEAT 1179
Query: 945 ETLYVDLSRDDAITLLKHLRDTLEDTDIKALKMIAKV 981
+ L +SR L RD ++ +D + + + KV
Sbjct: 1180 DILVSKISRQSIDALKDWFRDEMQKSDWQLIVELKKV 1216
>gb|AAF04443.1|AC010718_12 (AC010718) putative translation initiation factor IF-2; 74568-78972
[Arabidopsis thaliana]
Length = 1146
Score = 360 bits (915), Expect = 3e-98
Identities = 220/559 (39%), Positives = 334/559 (59%), Gaps = 20/559 (3%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T LLD IR TNV EAGGITQ IGAT P + +++ L A++K+PGLL IDTP
Sbjct: 588 TKLLDCIRGTNVQEGEAGGITQQIGATYFPAKNIRERTRELKA--DAKLKVPGLLVIDTP 645
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE+FT+LR+RG SL DLA+LVVDI G QPQTIES+ +LR T F++A NK+DR+ GW
Sbjct: 646 GHESFTNLRSRGSSLCDLAILVVDITHGLQPQTIESLNLLRMRNTEFIIALNKVDRLYGW 705
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
++ P + +K+Q++ + E +L ++I +F E G + + ++ +IVP S
Sbjct: 706 KTCKNAPIVKAMKQQNKDVINEFNLRLKKIINEFQEQGLNTELYYKNKDMGETFSIVPTS 765
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G G+ +LL+ + +Q+ + EKL E + T+LEV+ G G TIDV++ +G L
Sbjct: 766 AISGEGVPDLLLWLVQWAQKTMVEKLTYVDE--VQCTVLEVKVIEGHGTTIDVVLVNGEL 823
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
H+ D IVV G IVT IRALL P P+ E+R + + + E+ AA G+KI A GLE A
Sbjct: 824 HEGDQIVVCGLQGPIVTTIRALLTPHPMKELR-VKGTYLHHKEIKAAQGIKITAQGLEHA 882
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDK--VGVIVKADTLGSLEALSKELQEK 772
+AG+ + +D+E K+ +E +E V+ DK GV V+ TLGSLEAL + L+
Sbjct: 883 IAGTSLHVVGPDDDIEAMKESAMEDMESVLSRIDKSGEGVYVQTSTLGSLEALLEFLKTP 942
Query: 773 --EIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVG 830
IP+ +G V K D+M+A + E++ +Y IL F+VKV +A E+A VKIF
Sbjct: 943 AVNIPVSGIGIGPVHKKDIMKAGVMLEKKKEYATILAFDVKVTTEARELADEMGVKIFCA 1002
Query: 831 NVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEG 890
++IY+L ++ +++ +E+KK+E + FP V+++ P+ VF + +P I+G++V +G
Sbjct: 1003 DIIYQLFNQFQVYIENIKEEKKKESAGEAVFPCVLQILPN--CVFNKRDPIILGVKVHDG 1060
Query: 891 RIKPGVTLIKQNGQ--KVGVIRSIKSRDEFLQEAKKGQAVAIAI------EGAIVGRHIH 942
+K G + + +G I SI++ + + A+KG VAI I E + GRH
Sbjct: 1061 ILKIGTPICVPGREFTDIGRIASIENNHKPVDYAEKGDEVAIKIVASNREEQKMFGRHFD 1120
Query: 943 PGETLYVDLSRDDAITLLK 961
+ L +SR +I +LK
Sbjct: 1121 MEDELVSHISR-RSIDILK 1138
>gi|6319282 97 kDa protein; Fun12p [Saccharomyces cerevisiae]
>gi|1723187|sp|P39730|IF2P_YEAST TRANSLATION INITIATION
FACTOR IF-2 >gi|2131258|pir||S70292 FUN12 protein -
yeast (Saccharomyces cerevisiae)
>gi|1326056|gb|AAC04996.1| (U12980) Fun12p: 97kDa
protein, function unknown [Saccharomyces cerevisiae]
Length = 1002
Score = 358 bits (908), Expect = 2e-97
Identities = 221/589 (37%), Positives = 352/589 (59%), Gaps = 34/589 (5%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T LLD+IR+TNV EAGGITQ IGAT PI+ +K + + K +PGLL IDTP
Sbjct: 419 TKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTFDVPGLLVIDTP 478
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE+F++LR+RG SL ++A+LV+DI G + QTIESI++LR + PFVVA NKIDR+ W
Sbjct: 479 GHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRDRKAPFVVALNKIDRLYDW 538
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+ F + KQ + +E +++ ++ + E G + + + +N ++ ++IVP S
Sbjct: 539 KAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSELYFQNKNMSKYVSIVPTS 598
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G G+ +LL L+ L+Q+ + ++L TILEV+ G G TIDVI+ +G L
Sbjct: 599 AVTGEGVPDLLWLLLELTQKRMSKQLM--YLSHVEATILEVKVVEGFGTTIDVILSNGYL 656
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYV--DEVTAAAGVKIAAPGLE 712
+ D IV+ G + IVT IRALL P+PL E+ R + +YV EV AA GVKIAA LE
Sbjct: 657 REGDRIVLCGMNGPIVTNIRALLTPQPLREL---RLKSEYVHHKEVKAALGVKIAANDLE 713
Query: 713 EALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKV--GVIVKADTLGSLEALSKELQ 770
+A++GS ++ +D ++ ++++ + ++ S D GV+V+A TLGSLEAL L+
Sbjct: 714 KAVSGSRLLVVGPEDDEDELMDDVMDDLTGLLDSVDTTGKGVVVQASTLGSLEALLDFLK 773
Query: 771 EKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVG 830
+ +IP+ +G V K DVM+A ++ E+ P+Y V+L F+VKV+++AE+ A+ + +KIF
Sbjct: 774 DMKIPVMSIGLGPVYKRDVMKASTMLEKAPEYAVMLCFDVKVDKEAEQYAEQEGIKIFNA 833
Query: 831 NVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEG 890
+VIY L + + + ++ E+++++ L FP V++ + + P I+G++V+EG
Sbjct: 834 DVIYHLFDSFTAYQEKLLEERRKDFLDYAIFPCVLQTL----QIINKRGPMIIGVDVLEG 889
Query: 891 RIKPGV---------TLIKQNGQKVGVIRSIKSRDEFLQEAKKGQ---AVAIAIEG---- 934
++ G T ++ +G + S++ + +QE KKGQ VA+ +E
Sbjct: 890 TLRVGTPICAVKTDPTTKERQTLILGKVISLEINHQPVQEVKKGQTAAGVAVRLEDPSGQ 949
Query: 935 -AIVGRHIHPGETLYVDLSRDDAITLL-KHLRDTLEDTD---IKALKMI 978
I GRH+ +TLY +SR TL K RD + +D +K LK++
Sbjct: 950 QPIWGRHVDENDTLYSLVSRRSIDTLKDKAFRDQVARSDWLLLKKLKVV 998
>gb|AAF04435.1|AC010718_4 (AC010718) putative translation initiation factor IF-2; 35582-30916
[Arabidopsis thaliana]
Length = 1224
Score = 348 bits (883), Expect = 2e-94
Identities = 217/557 (38%), Positives = 326/557 (57%), Gaps = 25/557 (4%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T LLD IR TNV EAGGITQ IGAT P + +++ L A++K+PGLL IDTP
Sbjct: 675 TKLLDCIRGTNVQEGEAGGITQQIGATYFPAKNIRERTRELKA--DAKLKVPGLLVIDTP 732
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE+FT+LR+RG SL DLA+LVVDI G +PQTIES+ +LR T F++A NK+DR+ GW
Sbjct: 733 GHESFTNLRSRGSSLCDLAILVVDIKHGLEPQTIESLNLLRMRNTEFIIALNKVDRLYGW 792
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
++ P + +K+Q++ E +L ++I +F E G + + + +IVP S
Sbjct: 793 KTCKNAPIVKAMKQQNKDVTNEFNIRLTDIITQFKEQGLNTEIYYKNKEMGETFSIVPTS 852
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G G+ +LL+ + +Q+ + EKL E + T+LEV+ G G TIDV++ +G L
Sbjct: 853 AKSGEGVPDLLLWLVQWAQKTMVEKLTYVDE--VQCTVLEVKVIEGHGTTIDVVLVNGEL 910
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
H+ D IVV G IVT IRALL P P+ E+R + + + E+ AA G+KI A GLE A
Sbjct: 911 HEGDQIVVCGLQGPIVTTIRALLTPHPMKELR-VKGTYLHHKEIKAAQGIKITAQGLEHA 969
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDK--VGVIVKADTLGSLEALSKELQEK 772
+AG+ + +D+E K+ +E +E V+ DK GV V+ TLGSLEAL + L+
Sbjct: 970 IAGTSLHVVGPDDDIEAMKESAMEDMESVLSRIDKSGEGVYVQTSTLGSLEALLEFLKTP 1029
Query: 773 EIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNV 832
+ I ++ N E S EE +Y IL F+VKV +A E+A VKIF ++
Sbjct: 1030 AVNIPVSEGYN-------EGWSDAREEKEYATILAFDVKVTTEARELADEMGVKIFCADI 1082
Query: 833 IYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRI 892
IY+L ++ +++ +E+KK+E + FP V+++ P+ VF + +P I+G++V +G +
Sbjct: 1083 IYQLFNQFQVYIENIKEEKKKESAGEAVFPCVLQILPN--CVFNKRDPIILGVKVHDGIL 1140
Query: 893 KPGVTLIKQNGQ--KVGVIRSIKSRDEFLQEAKKGQAVAIAI------EGAIVGRHIHPG 944
K G + + +G I SI++ + + A+KG VAI I E + GRH
Sbjct: 1141 KIGTPICVPGREFTDIGRIASIENNHKPVDYAEKGDEVAIKIVASNREEQKMFGRHFDME 1200
Query: 945 ETLYVDLSRDDAITLLK 961
+ L +SR +I +LK
Sbjct: 1201 DELVSHISR-RSIDILK 1216
>gb|AAA57228.1| (L29389) Fun12p [Saccharomyces cerevisiae]
Length = 875
Score = 347 bits (880), Expect = 4e-94
Identities = 220/592 (37%), Positives = 353/592 (59%), Gaps = 41/592 (6%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLW---KAEIKLPGLLFI 471
T LLD+IR+TNV EAGGITQ IGAT P ++++ +KLW K ++ + LL I
Sbjct: 288 TKLLDKIRQTNVQGGEAGGITQQIGATYFPSTLLRQ----KLKLWMNMKNKLLMSRLLVI 343
Query: 472 DTPGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRI 531
DTPGHE+F++LR+RG SL ++A+LV+DI G + QTIESI++LR + PFVVA NKIDR+
Sbjct: 344 DTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRDRKAPFVVALNKIDRL 403
Query: 532 KGWVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIV 591
W + F + KQ + +E +++ ++ + E G + + + +N ++ ++IV
Sbjct: 404 YDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSELYFQNKNMSKYVSIV 463
Query: 592 PISAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYD 651
P SA G G+ +LL L+ L+Q+ + ++L TILEV+ G G TIDVI+ +
Sbjct: 464 PTSAVTGEGVPDLLWLLLELTQKRMSKQLM--YLSHVEATILEVKVVQGFGTTIDVILSN 521
Query: 652 GTLHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYV--DEVTAAAGVKIAAP 709
G L + D IV+ G + IVT IRALL P+PL E+ R + +YV EV AA GVKIAA
Sbjct: 522 GYLREGDRIVLCGMNGPIVTNIRALLTPQPLREL---RLKSEYVHHKEVKAALGVKIAAN 578
Query: 710 GLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKV--GVIVKADTLGSLEALSK 767
LE+A++GS + +D ++ ++++ + ++ S D GV+V+A TLGSLEAL
Sbjct: 579 DLEKAVSGSRLHVVGPEDDEDELMDDVMDDLTGLLDSVDTTGKGVVVQASTLGSLEALLD 638
Query: 768 ELQEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKI 827
L++ +IP+ +G V K DVM+A ++ E+ P+Y V+L F+VKV+++AE+ A+ + +KI
Sbjct: 639 FLKDMKIPVMSIGLGPVYKRDVMKASTMLEKAPEYAVMLCFDVKVDKEAEQYAEQEGIKI 698
Query: 828 FVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEV 887
F +VIY L + + + ++ E+++++ L FP V++ + + P I+G++V
Sbjct: 699 FNADVIYHLFDSFTAYQEKLLEERRKDFLDYAIFPCVLQTL----QIINKRGPMIIGVDV 754
Query: 888 IEGRIKPGV---------TLIKQNGQKVGVIRSIKSRDEFLQEAKKGQ---AVAIAIEG- 934
+EG ++ G T ++ +G + S++ + +QE KKGQ VA+ +E
Sbjct: 755 LEGTLRVGTPICAVKTDPTTKERQTLILGKVISLEINHQPVQEVKKGQTAAGVAVRLEDP 814
Query: 935 ----AIVGRHIHPGETLYVDLSRDDAITLL-KHLRDTLEDTD---IKALKMI 978
I GRH+ +TLY +SR TL K RD + +D +K LK++
Sbjct: 815 SGQQPIWGRHVDENDTLYSLVSRTSIDTLKDKAFRDQVARSDWLLLKKLKVV 866
>gb|AAF80646.1|AC012190_2 (AC012190) Contains similarity to F28O16.19 a putative translation
initiation factor IF-2 gi|6143896 from Arabidopsis
thaliana gb|AC010718. It is a member of Elongation
factor Tu family. ESTs gb|AI994592 and gb|T20793 come
from thias gene
Length = 1552
Score = 343 bits (870), Expect = 6e-93
Identities = 211/556 (37%), Positives = 332/556 (58%), Gaps = 25/556 (4%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T LLD IR TNV EAGGITQ IGAT P E +++ L A++K+PG+L IDTP
Sbjct: 511 TKLLDCIRGTNVQEGEAGGITQQIGATFFPAENIRERTKELQA--NAKLKVPGILVIDTP 568
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE+FT+LR+RG +L DLA+LVVDI G +PQTIES+ +LR+ F++A NK+DR+ GW
Sbjct: 569 GHESFTNLRSRGSNLCDLAILVVDIMRGLEPQTIESLNLLRRRNVKFIIALNKVDRLYGW 628
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
++ P + +Q V+E + +L + +F E G + + + + ++I+P S
Sbjct: 629 EKSKNAPIRKTMMQQTGDVVKEFKMRLNRVQNQFQEQGLNSMLYYKNREMGETISILPAS 688
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G GI +LL+ + +Q+ + EKL + T+LEV+ G G T+DV++ +G L
Sbjct: 689 AISGEGIPDLLLFLVQWAQKTMVEKL--TYVDKVQCTVLEVKVIEGHGITVDVVLVNGVL 746
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
+ D IVV G IVT IR+LL P P++E+R + EV AA G+KIAA GLE A
Sbjct: 747 REGDQIVVCGSQGPIVTTIRSLLTPYPMNEMRVTGTYMPH-REVKAAQGIKIAAQGLEHA 805
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDK--VGVIVKADTLGSLEALSKELQEK 772
+AG+ + ED+E+AK+ +E IE V+ DK GV V+A TLGSLEAL + L+
Sbjct: 806 IAGTALHVIGPNEDMEEAKKNAMEDIESVMNRIDKSGEGVYVQASTLGSLEALLEFLKSS 865
Query: 773 E--IPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVG 830
+ IP+ +G V K D+M+A + E++ ++ IL F+VK++ +A E+A VKIF
Sbjct: 866 DVKIPVSGIGIGPVHKKDIMKAGVMLEKKKEFATILAFDVKISAEARELADKMGVKIFCD 925
Query: 831 NVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEG 890
+ IY L + ++ +++ +E+KK+E + FP ++++ P+ +++ + +P I+G++V +G
Sbjct: 926 DTIYCLFDKFKSYIEGIKEEKKKETACEAVFPCILQILPN--HIYNQRDPIILGVKVNDG 983
Query: 891 RIKPG--VTLIKQNG-----QKVGVIRSIKSRDEF-LQEAKKGQAVAIAI------EGAI 936
+K G + ++K+ +G + SIK+ + + A+KGQ VAI I E +
Sbjct: 984 ILKVGTPICIVKRIENVRVFMDIGRVSSIKNNNNMPVDYARKGQEVAIKIIASNPEEQKM 1043
Query: 937 VGRHIHPGETLYVDLS 952
GRH + L +S
Sbjct: 1044 FGRHFGVDDRLISHIS 1059
>gb|AAF47774.1| (AE003478) cIF2 gene product [Drosophila melanogaster]
Length = 932
Score = 271 bits (685), Expect = 3e-71
Identities = 160/366 (43%), Positives = 226/366 (61%), Gaps = 5/366 (1%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T +LD++R+T+V EAGGITQ IGAT VPIE +K+ + E +LPGLL IDTP
Sbjct: 569 TKILDKLRRTHVQDSEAGGITQQIGATNVPIEAIKEQTKYVKAAAGFEHRLPGLLIIDTP 628
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHE+F++LR RG SL D+A+LVVDI G +PQTIESI++L+K + PF+VA NKIDR+ W
Sbjct: 629 GHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESIQLLKKKKCPFIVALNKIDRLYDW 688
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+K+Q E + + ++I +F E G A F + +++VP S
Sbjct: 689 KQLARRDVRDVLKEQQSNTQLEFQQRTKDVILQFAEQGLNAALFYENTDPKTYISLVPTS 748
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G G+ LL +IA Q L ++L E + T+LEV+ PGLG TID I+ +G L
Sbjct: 749 AISGEGMGNLLFMIADFCQNMLAKRLMYSEE--LQATVLEVKALPGLGTTIDAILINGKL 806
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
+ T+VV G D IVT+IR+LL P+P+ E+R +Y EV AA GVKIAA LE+A
Sbjct: 807 REGQTMVVAGTDGPIVTQIRSLLMPQPMKELRVKNAYVEY-KEVKAAQGVKIAAKDLEKA 865
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVV--ISTDKVGVIVKADTLGSLEALSKELQEK 772
+AG ++ A P++VE +E+ +++ + I + GV V+A TLGSLEAL + L+
Sbjct: 866 IAGINLLIAHKPDEVEICTEEVARELKSALSHIKLAQTGVHVQASTLGSLEALLEFLRTS 925
Query: 773 EIPIRK 778
+IP K
Sbjct: 926 KIPNAK 931
>gb|AAC73030.1| (AC005824) putative translation initiation factor IF2 [Arabidopsis
thaliana]
Length = 479
Score = 266 bits (673), Expect = 8e-70
Identities = 163/434 (37%), Positives = 250/434 (57%), Gaps = 9/434 (2%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T LLD I NV EAGG TQ +GAT + + + L ++K+P LFIDTP
Sbjct: 50 TKLLDYITG-NVQEGEAGGTTQKMGATYLSARNILEKTMELKS--DTKLKVPRPLFIDTP 106
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
G+E +T+LR+RG L D A+LVVDI G +PQTIE + +LR T F++A NK+DR+ GW
Sbjct: 107 GYEFYTNLRSRGLGLCDFAILVVDIMHGLEPQTIECLNLLRMKNTEFIIALNKVDRLYGW 166
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
I E+ P L +K+Q + + E +L E+I +F E G + + + + +IVP
Sbjct: 167 RICENAPILEAMKQQTKDVINEFNMRLNEIINQFKEQGLNSELYYKNKEMGETFSIVPTC 226
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G GI +LL+L+ L+Q+ + EKL V+ + T+LEV+ G G TIDV++ +G L
Sbjct: 227 AISGEGIPDLLLLLVQLTQKTMVEKLITYVD-KVQCTVLEVKVMEGYGTTIDVVLVNGEL 285
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
H+ IVV G IVT IRALL P P+ E+ + + + AA + I A LE
Sbjct: 286 HEGGQIVVCGLQGPIVTTIRALLTPHPIKELH-VNGNHVHHEVIKAAECINIIAKDLEHV 344
Query: 715 LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDK--VGVIVKADTLGSLEALSKELQEK 772
+ G+ + +D+E K+ ++E + V+ DK GV ++A TLGSLEAL + L+
Sbjct: 345 IVGTALHVVGPDDDIEAIKELVMEDVNSVLSRIDKSGEGVYIQASTLGSLEALLEFLKSP 404
Query: 773 --EIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVG 830
++P+ +G V K DVM+A + E + ++ IL +V+V +A E+A +VKIF
Sbjct: 405 AVKLPVGGIGIGPVQKKDVMKAGVMLERKKEFATILALDVEVTTEARELADEMEVKIFCS 464
Query: 831 NVIYKLIEDYEEWV 844
+++Y L + Y+ ++
Sbjct: 465 DIMYHLFDQYQAYI 478
>emb|CAA07018.1| (AJ006412) putative GTP-binding protein [Homo sapiens]
Length = 388
Score = 221 bits (557), Expect = 3e-56
Identities = 132/388 (34%), Positives = 224/388 (57%), Gaps = 15/388 (3%)
Query: 604 LLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVG 663
L+ L+ L+Q L ++L E R ++EV+ PG+G TIDVI+ +G L + DTI+V
Sbjct: 2 LIYLLVELTQTMLSKRLAHCEE--LRAQVMEVKALPGMGTTIDVILINGRLKEGDTIIVP 59
Query: 664 GKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALAGSPVIAA 723
G + IVT+IR LL P P+ E+R + +++ EV AA GVKI LE+ LAG P++ A
Sbjct: 60 GVEGPIVTQIRGLLLPPPMKELR-VKNQYEKHKEVEAAQGVKILGKDLEKTLAGLPLLVA 118
Query: 724 PTPEDVEKAKQEILEQIERVV--ISTDKVGVIVKADTLGSLEALSKELQEKEIPIRKADV 781
+++ K E++ ++++ + I ++ GV V+A TLGSLEAL + L+ E+P ++
Sbjct: 119 YKEDEIPVLKDELIHELKQTLNAIKLEEKGVYVQASTLGSLEALLEFLKTSEVPYAGINI 178
Query: 782 GNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYE 841
G V K DVM+A + E +P+Y VIL F+V++ DA+E+A + V+IF +IY L + +
Sbjct: 179 GPVHKKDVMKASVMLEHDPQYAVILAFDVRIERDAQEMADSLGVRIFSAEIIYHLFDAFT 238
Query: 842 EWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKPGVTLI-- 899
++ ++ +++K+ E FP I++ P +Y+F +P ++G+ V G++K G +
Sbjct: 239 KYRQDYKKQKQEEFKHIAVFPCKIKILP--QYIFNSRDPIVMGVTVEAGQVKQGTPMCVP 296
Query: 900 KQNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIE------GAIVGRHIHPGETLYVDLSR 953
+N +G++ SI+ + + AKKGQ V + IE + GRH + L +SR
Sbjct: 297 SKNFVDIGIVTSIEINHKQVDVAKKGQEVCVKIEPIPGESPKMFGRHFEATDILVSKISR 356
Query: 954 DDAITLLKHLRDTLEDTDIKALKMIAKV 981
L RD ++ +D + + + KV
Sbjct: 357 QSIDALKDWFRDEMQKSDWQLIVELKKV 384
>sp|Q9WZN3|IF2_THEMA TRANSLATION INITIATION FACTOR IF-2 >gi|7443423|pir||E72337
translation initiation factor IF-2 - Thermotoga maritima
(strain MSB8) >gi|4981303|gb|AAD35857.1|AE001746_18
(AE001746) translation initiation factor IF-2
[Thermotoga maritima]
Length = 690
Score = 190 bits (477), Expect = 8e-47
Identities = 195/657 (29%), Positives = 300/657 (44%), Gaps = 122/657 (18%)
Query: 310 FIERGSPSLSKKIAILEGKLKAELRVLEEEGLIKDGKLTPLGRELLEVWRNREFDSKDVD 369
F++RG IA+ G++ L++ E E ++K+ K+ +E+ ++ ++VD
Sbjct: 113 FVKRG-------IALRPGQI---LKLEEVEQILKEYKIE------IEIEEEQQTSVEEVD 156
Query: 370 YIRNIAETLVFIPVENVEEEEYDGYVYDLTTETHNFIANGILVHN-TTLLDRIRKTNVAA 428
F +E +E Y+ L G + H TTLLDRIR T VA
Sbjct: 157 E---------FELLEKRYQELYEKEKDKLVPRPPVVTVMGHVDHGKTTLLDRIRSTRVAE 207
Query: 429 KEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTSLRARGGS 488
+E GGITQ IGA +V + K + FIDTPGHE FT +RARG
Sbjct: 208 REEGGITQSIGAYQVEVNGKK------------------ITFIDTPGHELFTEMRARGAQ 249
Query: 489 LADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEPFLMNIKK 548
D+ VLVV ++G PQTIE+ + P +VA NKID+ N++K
Sbjct: 250 ATDIVVLVVAADDGVMPQTIEAYNHAKAANVPIIVAINKIDKPNA-----------NVEK 298
Query: 549 QDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGIAELLVLI 608
Q V++L LI + E+G + +VPISA+ G G+ ELL +I
Sbjct: 299 TKQELVEKL-----GLIPE--EWG-------------GDTIVVPISARTGQGVDELLEMI 338
Query: 609 AGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVGGKDKA 668
+++ ++K EGPAR I+E + + +G I+ DG L D +V
Sbjct: 339 LLVAEM---NEIKCYPEGPARAVIIESKLDKKMGPVASAIVKDGVLKVGDAVVASNTYGR 395
Query: 669 IVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALAGSPVIAAPTPED 728
+ ++P P + D + V + E+ + I +
Sbjct: 396 VRNLFDDNMRPIREAYPSQPVMILGFEDVPDVHSNVYVV-----ESAEKAKEIVEKRLQR 450
Query: 729 VEKAKQE----ILEQIERVVISTDK--VGVIVKADTLGSLEALS---KELQEKEIPIR-- 777
+E KQ LE++ +++ +K + +I+KADT GS+ AL +LQ KEI +
Sbjct: 451 LEAQKQSRKHINLEELMKMMQEKEKKVLNLILKADTYGSVAALKNAINKLQSKEIELNIV 510
Query: 778 KADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLI 837
A VG +S +DVM A +V GVILGF VKVN A +A+ + V + ++IYKL+
Sbjct: 511 HAGVGEISTSDVMLAAAVD------GVILGFRVKVNNQARRLAEQEGVDVRTYSIIYKLV 564
Query: 838 EDYE---EWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPA-IVGIEVIEGRI- 892
ED + E + E EE + +V G I R VF+ S + G+++++G+
Sbjct: 565 EDLKLALEGMLEPEE------VEEVIGHGEI------RKVFKISKVGKVAGVQMLDGKAD 612
Query: 893 KPGVTLIKQNGQKV--GVIRSIKSRDEFLQEAKKGQAVAIAIEGAIVGRHIHPGETL 947
+ G I +NGQ V G I S+K E + + Q I G IH G+ L
Sbjct: 613 RNGFVRIYRNGQLVFGGKIESLKHYKEDVSVVEAPQECGIKFAGF---DDIHEGDEL 666
>emb|CAB13536.1| (Z99112) initiation factor IF-2 [Bacillus subtilis]
Length = 716
Score = 182 bits (458), Expect = 1e-44
Identities = 174/569 (30%), Positives = 269/569 (46%), Gaps = 107/569 (18%)
Query: 360 NREFDSKDVDYIRNI--AETLVFIPVENVEEEEYD--GYVYDLTTETHNFIANGILVHN- 414
N+E D ++ I + ET I +E E E+Y+ DL G + H
Sbjct: 173 NQELDKDTIELIASEYGVETEEVIVLEETELEKYEEPDNEEDLEIRPPVVTIMGHVDHGK 232
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD IRKT V EAGGITQHIGA ++ E KKI F+DTP
Sbjct: 233 TTLLDSIRKTKVVEGEAGGITQHIGAYQIE-ENGKKIT-----------------FLDTP 274
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFT++RARG + D+ +LVV ++G PQT+E+I + P +VA NKID+
Sbjct: 275 GHAAFTTMRARGAEVTDITILVVAADDGVMPQTVEAINHAKAAEVPIIVAVNKIDK---- 330
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E P R +QEL E+G + + E VP+S
Sbjct: 331 --ESANP---------DRVMQELT-----------EYGLVP------EAWGGETIFVPLS 362
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G GI EL+ +I +S+ E+LK A+GT++E + G G +++ GTL
Sbjct: 363 ALTGKGIDELVEMILLVSE---VEELKANPNRQAKGTVIEAELDKGRGSVATLLVQTGTL 419
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLK------PKPLDEIRDPRFRFD----YVDEVTA- 700
H D IVVG G+ +A+V I +K P + + D D + DE TA
Sbjct: 420 HVGDPIVVGNTFGRVRAMVNDIGRRVKTAGPSTPVEITGLNDVPQAGDQFLVFKDEKTAR 479
Query: 701 AAGVKIAAPGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLG 760
+ G A+ LEE + + + + ++ EQI++ + + +IVKAD G
Sbjct: 480 SVGEARASKQLEEQRS----------DKAKLSLDDLFEQIKQGDVK--DINLIVKADVQG 527
Query: 761 SLEALSKELQEKE-----IPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNED 815
S EAL+ LQ+ E + I VG ++++D++ A +++GFNV+ + +
Sbjct: 528 SAEALTAALQKIEVEGVKVKIIHTGVGAITESDIILA------SASNAIVIGFNVRPDGN 581
Query: 816 AEEVAKAKDVKIFVGNVIYKLIEDYEEWVK-----EEEEKKKRELLSKVTFP-----GVI 865
A+ A+A++V I + +IYK+I++ E +K E EEK ++ + TF +
Sbjct: 582 AKSTAEAENVDIRLHRIIYKVIDEIEAAMKGMLDPEYEEKVIGQVEVRQTFKVSKIGTIA 641
Query: 866 RLYPDERYVFRRSNPAIV--GIEVIEGRI 892
Y E + R S ++ G+ + EG +
Sbjct: 642 GGYVTEGTITRDSGLRLIRDGVVIFEGEV 670
>sp|P17889|IF2_BACSU TRANSLATION INITIATION FACTOR IF-2 >gi|98394|pir||A35269
translation initiation factor IF-2 - Bacillus subtilis
>gi|49319|emb|CAA79234.1| (Z18631) IF2 [Bacillus
subtilis] >gi|143359|gb|AAA22673.1| (M34836) protein
synthesis initiation factor 2 (infB) [Bacillus subtilis]
Length = 716
Score = 182 bits (458), Expect = 1e-44
Identities = 174/569 (30%), Positives = 269/569 (46%), Gaps = 107/569 (18%)
Query: 360 NREFDSKDVDYIRNI--AETLVFIPVENVEEEEYD--GYVYDLTTETHNFIANGILVHN- 414
N+E D ++ I + ET I +E E E+Y+ DL G + H
Sbjct: 173 NQELDKDTIELIASEYGVETEEVIVLEETELEKYEEPDNEEDLEIRPPVVTIMGHVDHGK 232
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD IRKT V EAGGITQHIGA ++ E KKI F+DTP
Sbjct: 233 TTLLDSIRKTKVVEGEAGGITQHIGAYQIE-ENGKKIT-----------------FLDTP 274
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFT++RARG + D+ +LVV ++G PQT+E+I + P +VA NKID+
Sbjct: 275 GHAAFTTMRARGAEVTDITILVVAADDGVMPQTVEAINHAKAAEVPIIVAVNKIDK---- 330
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E P R +QEL E+G + + E VP+S
Sbjct: 331 --ESANP---------DRVMQELT-----------EYGLVP------EAWGGETIFVPLS 362
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G GI EL+ +I +S+ E+LK A+GT++E + G G +++ GTL
Sbjct: 363 ALTGKGIDELVEMILLVSE---VEELKANPNRQAKGTVIEAELDKGRGSVATLLVQTGTL 419
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLK------PKPLDEIRDPRFRFD----YVDEVTA- 700
H D IVVG G+ +A+V I +K P + + D D + DE TA
Sbjct: 420 HVGDPIVVGNTFGRVRAMVNDIGRRVKTAGPSTPVEITGLNDVPQAGDQFLVFKDEKTAR 479
Query: 701 AAGVKIAAPGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLG 760
+ G A+ LEE + + + + ++ EQI++ + + +IVKAD G
Sbjct: 480 SVGEARASKQLEEQRS----------DKAKLSLDDLFEQIKQGDVK--DINLIVKADVQG 527
Query: 761 SLEALSKELQEKE-----IPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNED 815
S EAL+ LQ+ E + I VG ++++D++ A +++GFNV+ + +
Sbjct: 528 SAEALTAALQKIEVEGVKVKIIHTGVGAITESDIILA------SASNAIVIGFNVRPDGN 581
Query: 816 AEEVAKAKDVKIFVGNVIYKLIEDYEEWVK-----EEEEKKKRELLSKVTFP-----GVI 865
A+ A+A++V I + +IYK+I++ E +K E EEK ++ + TF +
Sbjct: 582 AKSTAEAENVDIRLHRIIYKVIDEIEAAMKGMLDPEYEEKVIGQVEVRQTFKVSKIGTIA 641
Query: 866 RLYPDERYVFRRSNPAIV--GIEVIEGRI 892
Y E + R S ++ G+ + EG +
Sbjct: 642 GGYVTEGTITRDSGLRLIRDGVVIFEGEV 670
>sp|O67825|IF2_AQUAE TRANSLATION INITIATION FACTOR IF-2 >gi|7443418|pir||E70474
translation initiation factor IF-2 - Aquifex aeolicus
>gi|2984268|gb|AAC07794.1| (AE000769) initiation factor
IF-2 [Aquifex aeolicus]
Length = 805
Score = 178 bits (446), Expect = 3e-43
Identities = 210/795 (26%), Positives = 344/795 (42%), Gaps = 144/795 (18%)
Query: 190 EERSEVKGESVIVEARELVEPLSLALLRFGIFSKIQGS--KLIVTGKRNLEAFKDYIGFK 247
E++ E K E VIVE E+VE ++ I K + K K+++E I K
Sbjct: 81 EKKEEEKKEEVIVE--EVVEEKKPEVIVEEIEEKKEEEEKKEEEKPKKSVEELIKEILEK 138
Query: 248 DEREKALEEAIEKVKGSEVYPIFEEIRRLRLLFGFTREELGSYAKYENSEAPTYEELMEI 307
E+EK ++ +EK + E + E + R +EE K + + E+M
Sbjct: 139 KEKEKE-KKKVEKERKEEKVRVVEVKKEERK--EEKKEEKKEEEKPKIKMSKKEREIMRK 195
Query: 308 LDFIERGSPSLSKKIAILEGKLKAELRVLEEEGLIKDGKLTPLGRELLEVWRNR---EFD 364
L+ +K + K + E++++ +I +L ELL+V N+ E
Sbjct: 196 LEHAVEKEKKKQEKREKEKKKKEEEVKIIYIPEVITVRELA----ELLDVPANKVIAELM 251
Query: 365 SKDV----------DYIRNIAETLVFIPVENVEEEEYDGYVY---------DLTTETHNF 405
+ V + +AE+ ++ EEEE + +L
Sbjct: 252 KRGVLATINQPVPPEVAVEVAESFGYLAEVKKEEEELEEEALLKEEEEREEELQPRPPIV 311
Query: 406 IANGILVHN-TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIK 464
+ G + H TTLLDRIRKTNVA +E GGITQHIGA++V + +KI
Sbjct: 312 VVMGHVDHGKTTLLDRIRKTNVAEREKGGITQHIGASQVELPDGRKIT------------ 359
Query: 465 LPGLLFIDTPGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVA 524
F+DTPGHEAFT+LRARG + D++VLVV ++G PQTIE+I + + P +VA
Sbjct: 360 -----FLDTPGHEAFTTLRARGAKVTDISVLVVAADDGVMPQTIEAINHAKAFNVPIIVA 414
Query: 525 ANKIDRIKGWVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNF 584
NKID+ +P + + + + E E+G
Sbjct: 415 VNKIDK------PNADPMKVRRELSEHGLIPE-------------EWG------------ 443
Query: 585 TRELAIVPISAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHT 644
+ V ISAK G + +LL +I L+ +LK ARGTI+E + + G
Sbjct: 444 -GDTIFVDISAKTGQNVDQLLEMILLLADIL---ELKANPNKKARGTIIESKLDRKRGPV 499
Query: 645 IDVIIYDGTLHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGV 704
VI+ DGTL D V G ++RA+ K V E + V
Sbjct: 500 ATVIVEDGTLRVGDHFVAG----TTYGRVRAMFDDKGRQ-----------VKEAPPSTPV 544
Query: 705 KIAAPGLEE-ALAGSPVIAAP---TPEDVEKAKQEILEQIERVVI-------------ST 747
++ G EE AG +I T ++ + ++E E+ E++ T
Sbjct: 545 EVL--GFEELPEAGDELIVVDDERTAREIAEKRKEKKEREEKLQTIRLEDIYKKIQTGET 602
Query: 748 DKVGVIVKADTLGSLEALSKELQE-----KEIPIRKADVGNVSKTDVMEALSVKEEEPKY 802
++ +++K DT+GSLEAL K L+E ++ I VG +++ D+M A +
Sbjct: 603 KELRIVLKTDTMGSLEALKKSLEELSNEKVQVKIIHGAVGGITENDIMLA------KASG 656
Query: 803 GVILGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEE-WVKEEEEKKKRELLSKVTF 861
+++GFN + + A E+ + + V + + VIY+ IED ++ V E KK E++
Sbjct: 657 AIVIGFNTRPDPKARELMEKEKVDVRLYGVIYEAIEDVKKALVGLLEPIKKEEVIGMAEV 716
Query: 862 PGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKPGV-TLIKQNGQKV--GVIRSIKSRDEF 918
++ + + G V+ G++ G + + G + G I S+K E
Sbjct: 717 RATFKI---------KKVGTVAGCYVLNGKLVRGAKARLIREGVVIYDGEIESLKRFKED 767
Query: 919 LQEAKKGQAVAIAIE 933
+QE G + ++
Sbjct: 768 VQEVTAGYECGVKLK 782
>sp|Q9ZF20|IF2_STRAG TRANSLATION INITIATION FACTOR IF-2 >gi|3947714|emb|CAA05919.1|
(AJ003164) initiation factor IF2 [Streptococcus
agalactiae] >gi|9558375|emb|CAC00489.1| (AJ251495)
initiation factor 2 [Streptococcus agalactiae]
>gi|9558378|emb|CAC00491.1| (AJ251496) initiation factor
2 [Streptococcus agalactiae]
Length = 927
Score = 176 bits (443), Expect = 8e-43
Identities = 168/574 (29%), Positives = 258/574 (44%), Gaps = 132/574 (22%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD +R + VA EAGGITQHIGA ++ E KKI F+DTP
Sbjct: 444 TTLLDTLRNSRVATGEAGGITQHIGAYQIE-EAGKKIT-----------------FLDTP 485
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG S+ D+ +L+V ++G PQT+E+I + P +VA NKID+
Sbjct: 486 GHAAFTSMRARGASVTDITILIVAADDGVMPQTVEAINHSKAAGVPIIVAINKIDKPGA- 544
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+R + EL E G + + F V IS
Sbjct: 545 --------------NPERVISELA-----------EHGVISTAWGGESEF------VEIS 573
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK+G I ELL + +++ E+LK + + A GT++E R + G G +++ GTL
Sbjct: 574 AKFGKNIQELLETVLLVAEM---EELKADADVRAIGTVIEARLDKGKGAVATLLVQQGTL 630
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGL 711
+ D IVVG G+ +A+ + +K A ++ GL
Sbjct: 631 NVQDPIVVGNTFGRVRAMTNDLGRRVK--------------------VAGPSTPVSITGL 670
Query: 712 EEALAGSPVIAAPTPEDV------EKAKQEILEQ---IERVVI----------STDKVGV 752
EA A E E+AK+ +L+Q +RV + V V
Sbjct: 671 NEAPMAGDHFAVYADEKAARAAGEERAKRALLKQRQNTQRVSLENLFDTLKAGEVKSVNV 730
Query: 753 IVKADTLGSLEALSKELQEKEIPIRKAD-----VGNVSKTDVMEALSVKEEEPKYGVILG 807
I+KAD GS+EAL+ L + ++ K + VG ++++DV A E VI+G
Sbjct: 731 IIKADVQGSVEALAASLLKIDVEGVKVNVVHSAVGAINESDVTLA------EASNAVIIG 784
Query: 808 FNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRL 867
FNV+ A + A A DV+I ++IYK+IE+ EE +K + + + +E K+ +I
Sbjct: 785 FNVRPTPQARQQADADDVEIRQHSIIYKVIEEVEEAMKGKLDPEYQE---KILGEAII-- 839
Query: 868 YPDERYVFRRSNPAIV-GIEVIEGRI-KPGVTLIKQNGQKV--GVIRSIKSRDEFLQEAK 923
R F+ S + G VI G++ + + ++G + G + S+K + ++E
Sbjct: 840 ----RETFKVSKVGTIGGFMVINGKVTRDSSVRVIRDGVVIFDGKLASLKHYKDDVKEVG 895
Query: 924 KGQAVAIAIEGAIVGRHIHPGETLYVDLSRDDAI 957
Q + IE Y DL DD I
Sbjct: 896 NAQEGGLMIEN-------------YNDLKEDDTI 916
>emb|CAC00485.1| (AJ251493) initiation Factor 2 [Streptococcus agalactiae]
>gi|9558372|emb|CAC00487.1| (AJ251494) initiation factor
2 [Streptococcus agalactiae]
Length = 927
Score = 176 bits (443), Expect = 8e-43
Identities = 168/574 (29%), Positives = 258/574 (44%), Gaps = 132/574 (22%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD +R + VA EAGGITQHIGA ++ E KKI F+DTP
Sbjct: 444 TTLLDTLRNSRVATGEAGGITQHIGAYQIE-EAGKKIT-----------------FLDTP 485
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG S+ D+ +L+V ++G PQT+E+I + P +VA NKID+
Sbjct: 486 GHAAFTSMRARGASVTDITILIVAADDGVMPQTVEAINHSKAAGVPIIVAINKIDKPGA- 544
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+R + EL E G + + F V IS
Sbjct: 545 --------------NPERVISELA-----------EHGVISTAWGGESEF------VEIS 573
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK+G I ELL + +++ E+LK + + A GT++E R + G G +++ GTL
Sbjct: 574 AKFGKNIQELLETVLLVAEM---EELKADADVRAIGTVIEARLDKGKGAVATLLVQQGTL 630
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGL 711
+ D IVVG G+ +A+ + +K A ++ GL
Sbjct: 631 NVQDPIVVGNTFGRVRAMTNDLGRRVK--------------------VAGPSTPVSITGL 670
Query: 712 EEALAGSPVIAAPTPEDV------EKAKQEILEQ---IERVVI----------STDKVGV 752
EA A E E+AK+ +L+Q +RV + V V
Sbjct: 671 NEAPMAGDHFAVYADEKAARAAGEERAKRALLKQRQNTQRVSLENLFDTLKAGEVKSVNV 730
Query: 753 IVKADTLGSLEALSKELQEKEIPIRKAD-----VGNVSKTDVMEALSVKEEEPKYGVILG 807
I+KAD GS+EAL+ L + ++ K + VG ++++DV A E VI+G
Sbjct: 731 IIKADVQGSVEALAASLLKIDVEGVKVNVVHSAVGAINESDVTLA------EASNAVIIG 784
Query: 808 FNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRL 867
FNV+ A + A A DV+I ++IYK+IE+ EE +K + + + +E K+ +I
Sbjct: 785 FNVRPTPQARQQADADDVEIRQHSIIYKVIEEVEEAMKGKLDPEYQE---KILGEAII-- 839
Query: 868 YPDERYVFRRSNPAIV-GIEVIEGRI-KPGVTLIKQNGQKV--GVIRSIKSRDEFLQEAK 923
R F+ S + G VI G++ + + ++G + G + S+K + ++E
Sbjct: 840 ----RETFKVSKVGTIGGFMVINGKVTRDSSVRVIRDGVVIFDGKLASLKHYKDDVKEVG 895
Query: 924 KGQAVAIAIEGAIVGRHIHPGETLYVDLSRDDAI 957
Q + IE Y DL DD I
Sbjct: 896 NAQEGGLMIEN-------------YNDLKEDDTI 916
>emb|CAC00497.1| (AJ251499) initiation factor 2 [Streptococcus agalactiae]
Length = 927
Score = 176 bits (443), Expect = 8e-43
Identities = 168/574 (29%), Positives = 258/574 (44%), Gaps = 132/574 (22%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD +R + VA EAGGITQHIGA ++ E KKI F+DTP
Sbjct: 444 TTLLDTLRNSRVATGEAGGITQHIGAYQIE-EAGKKIT-----------------FLDTP 485
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG S+ D+ +L+V ++G PQT+E+I + P +VA NKID+
Sbjct: 486 GHAAFTSMRARGASVTDITILIVAADDGVMPQTVEAINHSKAAGVPIIVAINKIDKPGA- 544
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+R + EL E G + + F V IS
Sbjct: 545 --------------NPERVISELA-----------EHGVISTAWGGESEF------VEIS 573
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK+G I ELL + +++ E+LK + + A GT++E R + G G +++ GTL
Sbjct: 574 AKFGKNIQELLETVLLVAEM---EELKADADVRAIGTVIEARLDKGKGAVATLLVQQGTL 630
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGL 711
+ D IVVG G+ +A+ + +K A ++ GL
Sbjct: 631 NVQDPIVVGNTFGRVRAMTNDLGRRVK--------------------VAGPSTPVSITGL 670
Query: 712 EEALAGSPVIAAPTPEDV------EKAKQEILEQ---IERVVI----------STDKVGV 752
EA A E E+AK+ +L+Q +RV + V V
Sbjct: 671 NEAPMAGDHFAVYADEKAARAAGEERAKRALLKQRQNTQRVSLENLFDTLKAGEVKSVNV 730
Query: 753 IVKADTLGSLEALSKELQEKEIPIRKAD-----VGNVSKTDVMEALSVKEEEPKYGVILG 807
I+KAD GS+EAL+ L + ++ K + VG ++++DV A E VI+G
Sbjct: 731 IIKADVQGSVEALAASLLKIDVEGVKVNVVHSAVGAINESDVTLA------EASNAVIIG 784
Query: 808 FNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRL 867
FNV+ A + A A DV+I ++IYK+IE+ EE +K + + + +E K+ +I
Sbjct: 785 FNVRPTPQARQQADADDVEIRQHSIIYKVIEEVEEAMKGKLDPEYQE---KILGEAII-- 839
Query: 868 YPDERYVFRRSNPAIV-GIEVIEGRI-KPGVTLIKQNGQKV--GVIRSIKSRDEFLQEAK 923
R F+ S + G VI G++ + + ++G + G + S+K + ++E
Sbjct: 840 ----RETFKVSKVGTIGGFMVINGKVTRDSSVRVIRDGVVIFDGKLASLKHYKDDVKEVG 895
Query: 924 KGQAVAIAIEGAIVGRHIHPGETLYVDLSRDDAI 957
Q + IE Y DL DD I
Sbjct: 896 NAQEGGLMIEN-------------YNDLKEDDTI 916
>emb|CAC00493.1| (AJ251497) initiation factor 2 [Streptococcus agalactiae]
>gi|9558384|emb|CAC00495.1| (AJ251498) initiation factor
2 [Streptococcus agalactiae]
Length = 927
Score = 175 bits (440), Expect = 2e-42
Identities = 168/574 (29%), Positives = 257/574 (44%), Gaps = 132/574 (22%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD +R + VA EAGGITQHIGA ++ E KKI F+DTP
Sbjct: 444 TTLLDTLRNSRVATGEAGGITQHIGAYQIE-EAGKKIT-----------------FLDTP 485
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG S+ D+ +L+V ++G PQT+E+I + P +VA NKID+
Sbjct: 486 GHAAFTSMRARGASVTDITILIVAADDGVMPQTVEAINHSKAAGVPIIVAINKIDKPGA- 544
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+R + EL E G + + F V IS
Sbjct: 545 --------------NPERVISELA-----------EHGVISTAWGGESEF------VEIS 573
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK+G I ELL + +++ E+LK + + A GT++E R + G G +++ GTL
Sbjct: 574 AKFGKNIQELLETVLLVAEM---EELKADADVRAIGTVIEARLDKGKGAVATLLVQQGTL 630
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGL 711
+ D IVVG G+ +A+ + +K A ++ GL
Sbjct: 631 NVQDPIVVGNTFGRVRAMTNDLGRRVK--------------------VAGPSTPVSITGL 670
Query: 712 EEALAGSPVIAAPTPEDV------EKAKQEILEQ---IERVVI----------STDKVGV 752
EA A E E+AK+ +L+Q +RV + V V
Sbjct: 671 NEAPMAGDHFAVYADEKAARAAGEERAKRALLKQRQNTQRVSLENLFDTLKAGEVKSVNV 730
Query: 753 IVKADTLGSLEALSKELQEKEIPIRKAD-----VGNVSKTDVMEALSVKEEEPKYGVILG 807
I+KAD GS+EAL L + ++ K + VG ++++DV A E VI+G
Sbjct: 731 IIKADVQGSVEALVASLLKIDVEGVKVNVVHSAVGAINESDVTLA------EASNAVIIG 784
Query: 808 FNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRL 867
FNV+ A + A A DV+I ++IYK+IE+ EE +K + + + +E K+ +I
Sbjct: 785 FNVRPTPQARQQADADDVEIRQHSIIYKVIEEVEEAMKGKLDPEYQE---KILGEAII-- 839
Query: 868 YPDERYVFRRSNPAIV-GIEVIEGRI-KPGVTLIKQNGQKV--GVIRSIKSRDEFLQEAK 923
R F+ S + G VI G++ + + ++G + G + S+K + ++E
Sbjct: 840 ----RETFKVSKVGTIGGFMVINGKVTRDSSVRVIRDGVVIFDGKLASLKHYKDDVKEVG 895
Query: 924 KGQAVAIAIEGAIVGRHIHPGETLYVDLSRDDAI 957
Q + IE Y DL DD I
Sbjct: 896 NAQEGGLMIEN-------------YNDLKEDDTI 916
>pir||H81430 translation initiation factor IF-2 Cj0136 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6967630|emb|CAB72620.1| (AL139074) translation
initiation factor IF-2 [Campylobacter jejuni]
Length = 871
Score = 170 bits (427), Expect = 6e-41
Identities = 183/601 (30%), Positives = 272/601 (44%), Gaps = 132/601 (21%)
Query: 371 IRNIAETLVFIPVENVEEEEYDGYVYDLTTETHNFIANGILVHN-TTLLDRIRKTNVAAK 429
I I E F V++ EEE + DL T G + H T+LLD IRK+ VA+
Sbjct: 344 INIINEADEFDYVKDYEEETDEK---DLVTRAPVITIMGHVDHGKTSLLDYIRKSRVASG 400
Query: 430 EAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTSLRARGGSL 489
EAGGITQH+GA V K + FIDTPGHEAFT++RARG S+
Sbjct: 401 EAGGITQHVGAYMVEKNGRK------------------ITFIDTPGHEAFTAMRARGASI 442
Query: 490 ADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEPFLMNIKKQ 549
D+ ++VV ++G +PQT E+I + P ++A NK+D+ E P ++ +
Sbjct: 443 TDIVIIVVAADDGVKPQTKEAINHAKAAGVPIIIAINKMDK------EAANPDMV----K 492
Query: 550 DQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGIAELLVLIA 609
Q A E+ W G YEF V +SAK G+GI +LL ++
Sbjct: 493 TQLAEMEIMPVEW---GGSYEF-------------------VGVSAKTGMGIEDLLEIVL 530
Query: 610 GLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVGGKDKAI 669
L LE LK + A+ +I+E + G G VI+ +GTL T+V G
Sbjct: 531 -LQADILE--LKANPKSFAKASIIESSVQKGRGAVATVIVQNGTLTVGSTVVAG----EA 583
Query: 670 VTKIRALL--KPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEE-ALAGSPVIAAPTP 726
K+RA+ + K L EI+ GV + GL E A AG +IA T
Sbjct: 584 YGKVRAMSDDQGKALKEIK------------PGECGVIV---GLSEVADAGEILIAVKTD 628
Query: 727 EDVEK---AKQEILEQIE---RVVISTDKVG------------VIVKADTLGSLEALSKE 768
++ + + E Q E +S D++G VI+KAD GSLEAL
Sbjct: 629 KEAREYANKRHEYNRQKELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSLEALKAS 688
Query: 769 LQ-----EKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAK 823
L+ E ++ I + VG ++++D+ E S E ++LGFN++ + +E AK K
Sbjct: 689 LEKLRNDEIKVNIIHSGVGGITQSDI-ELASASEN----SIVLGFNIRPTGEVKERAKDK 743
Query: 824 DVKIFVGNVIYKLIEDYEEW-------VKEEEEKKKRELLSKVTFPGVIRLYPDERYVFR 876
V+I NVIY L++D + + EE+ + E+ + P +
Sbjct: 744 GVEIKTYNVIYNLLDDVKALLGGMMSPIISEEQLGQAEIRQVINVPKI------------ 791
Query: 877 RSNPAIVGIEVIEGRIKPGVTL-IKQNGQKV--GVIRSIKSRDEFLQEAKKGQAVAIAIE 933
I G V EG I G + + ++G V G + S+K + +E KG + IE
Sbjct: 792 ---GQIAGCMVTEGVINRGAKIRLIRDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIE 848
Query: 934 G 934
G
Sbjct: 849 G 849
>sp|P18311|IF2_ENTFC TRANSLATION INITIATION FACTOR IF-2 >gi|153661|gb|AAA26900.1|
(M36878) translational initiation factor IF2
[Enterococcus faecium]
Length = 784
Score = 169 bits (424), Expect = 1e-40
Identities = 159/510 (31%), Positives = 245/510 (47%), Gaps = 104/510 (20%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD +R + V + EAGGITQHIGA ++ I+ + F+DTP
Sbjct: 301 TTLLDTLRHSRVTSGEAGGITQHIGAYQIDIDGKP------------------ITFLDTP 342
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG S+ D+ +LVV ++G PQT+E+I + P +VA NKID+
Sbjct: 343 GHAAFTSMRARGASITDITILVVAADDGVMPQTVEAINHAKAAGVPIIVAVNKIDKPGA- 401
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
Q +QEL +ELI + + E V IS
Sbjct: 402 --------------NPQHVMQELSE--YELIPEAWG---------------GETIFVEIS 430
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK+G I ELL +I +++ E LK + + A GT++E R + G G +++ GTL
Sbjct: 431 AKFGQNIDELLEMILLVAE---VEDLKADPKQRAIGTVIEARLDKGKGPVTTLLVQQGTL 487
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLKP---------KPLDEIRDPRFRF-DYVDEVTA- 700
+ D IVVG G+ + +V + K L+++ RF + DE TA
Sbjct: 488 NVGDPIVVGNTYGRVRVMVNDLGRREKSAGPATPVEITGLNDVPQAGDRFVVFEDEKTAR 547
Query: 701 AAGVKIAAPGLEEALAGSPVIAAPTPEDV-EKAKQEILEQIERVVISTDKVGVIVKADTL 759
AAG + A L E A + + T +++ E K+ L++ V VI+KAD
Sbjct: 548 AAGEERAKRALLEHRA---ITSRVTLDNLFESLKEGELKE----------VNVIIKADVQ 594
Query: 760 GSLEALSKELQEKE-----IPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNE 814
GS EAL+ LQ+ + + I + VG ++++DV A + +I+GFNV+
Sbjct: 595 GSAEALAASLQKIDVEGVRVKIVHSAVGAINESDVTLAAA------SNAIIIGFNVRPTP 648
Query: 815 DAEEVAKAKDVKIFVGNVIYKLIEDYEEWVK-----EEEEKKKRELLSKVTFP-----GV 864
A+ A ++V I + +IYK IE+ E +K E EEK +++ + TF +
Sbjct: 649 QAKIQADNEEVDIRLHRIIYKAIEEIETAMKGMLDPEFEEKITGQMIVRETFKVSKVGTI 708
Query: 865 IRLYPDERYVFRRSNPAIV--GIEVIEGRI 892
Y E Y+ R S ++ GI + EG++
Sbjct: 709 AGAYVTEGYIRRDSGVRVIRDGIVIYEGQL 738
>pir||C75351 translation initiation factor IF-2 - Deinococcus radiodurans
(strain R1) >gi|6459577|gb|AAF11355.1|AE002021_4
(AE002021) initiation factor 2 [Deinococcus radiodurans]
Length = 597
Score = 164 bits (412), Expect = 3e-39
Identities = 151/543 (27%), Positives = 253/543 (45%), Gaps = 104/543 (19%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IRKT VAAKEAGGITQH+GA E K ++FIDTP
Sbjct: 114 TSLLDYIRKTRVAAKEAGGITQHVGAFEAKTSKGK------------------IVFIDTP 155
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAFT++RARG ++AD+A++V+ ++ PQT E+I + + P ++A NK+D
Sbjct: 156 GHEAFTTIRARGANVADIAIIVIAADDSLMPQTREAIAHAQAAKVPMLIAINKVD----- 210
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+ + +P ++++T L +L E+G ++ +VP+S
Sbjct: 211 -LPQADP-------------EKVKTDLTQLNLVPEEYG-------------GDVIVVPVS 243
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G G+ +LL I+ ++ E L+ + +G G I+E R + G V++ +GTL
Sbjct: 244 AKTGEGVEDLLEYISLTAEL---EDLRADPKGQFSGVIIEGRVDKQAGVLATVMVQEGTL 300
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLKPK-PLDEIRDPRFRFDYVDEVTAAAGVKIAAPG 710
H D +VVG GK KA+ +K P ++ F EV ++ ++A
Sbjct: 301 HVGDFLVVGENYGKIKAMTDSNGGRIKEAGPSTPVQILGF-----SEVPSSGETVVSAKN 355
Query: 711 LEEALAGSPVIAAPTPEDVEKAK-----QEILEQIERVVISTDKVGVIVKADTLGSLEAL 765
E A A D E A+ Q L + + V +I++ADT GSLEA+
Sbjct: 356 -EHAAREIVAQRASDRRDEEDARERRKAQRSLADLLGPLGEVHTVNLILRADTQGSLEAI 414
Query: 766 S-----KELQEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVA 820
KE ++ ++ + A +G ++ DV+ A + + + IL FNV + +VA
Sbjct: 415 QGILARKETEDVKLNVMLAGIGAPTEGDVLLASTAEAQ------ILCFNVTPSAAVTKVA 468
Query: 821 KAKDVKIFVGNVIYKLIEDYEEWVK-------EEEEKKKRELLSKVTFPGVIRLYPDERY 873
+ K++ I +IY++I++ + +K EE+ + E+ + P
Sbjct: 469 ETKEIPIKAYRIIYEMIDEVDRLIKGNLDPVFEEQYLGRAEVRMVIHHP----------- 517
Query: 874 VFRRSNPAIVGIEVIEGRIKPGVTLIKQNGQKV---GVIRSIKSRDEFLQEAKKGQAVAI 930
+ I G V +G K G++V G + +K + ++E ++G I
Sbjct: 518 ----KSGNIAGSYVTDGMFKRNAKAKVTRGKEVVYEGTVVGLKRFKDDVREVQQGYECGI 573
Query: 931 AIE 933
I+
Sbjct: 574 NID 576
>sp|P55875|IF2_STIAU TRANSLATION INITIATION FACTOR IF-2 >gi|11277726|pir||T43226
translation initiation factor IF-2 - Stigmatella
aurantiaca >gi|1934983|emb|CAA61162.1| (X87940)
initiation factor 2 (IF2) [Stigmatella aurantiaca]
Length = 1054
Score = 163 bits (408), Expect = 1e-38
Identities = 160/547 (29%), Positives = 244/547 (44%), Gaps = 112/547 (20%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR NVA+ EAGGITQHIGA V + F+DTP
Sbjct: 568 TSLLDAIRAANVASGEAGGITQHIGAYSVTTA------------------RGDITFLDTP 609
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAFTS+RARG ++ D+ +LVV ++G PQTIE+I+ + P VVA NK+
Sbjct: 610 GHEAFTSMRARGANVTDIVILVVAADDGVMPQTIEAIKHAKAAEVPIVVALNKM------ 663
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
D P + + A EL + W E +VP+S
Sbjct: 664 ----DVPGANPDRVKKDLANHELVPEEW----------------------GGETIMVPVS 697
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK +GI +LL+ L LE L PA G I+E + G G V++ +GTL
Sbjct: 698 AKQKMGI-DLLLENVVLQAEVLE--LTSNPSRPAVGAIIEGELDRGRGPVATVLVQEGTL 754
Query: 655 HKDDTIVVGGKDKAIVTKIRAL--LKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLE 712
D +V G ++RA+ + + + E+ Y EV +GV A +
Sbjct: 755 RVGDAVVTG----TDYGRVRAMNNSRGESVKEVLP-----GYCAEVIGLSGVPSAGDTI- 804
Query: 713 EALAGSPVIAAPTPEDVEKAKQEILEQIERVVI----STDKVG-------VIVKADTLGS 761
+A K +Q L ++ R + + K G V++KAD GS
Sbjct: 805 NVVADEKAAKQIAEHRGMKERQSELSKVSRETLDQLFAKTKAGGGPKELRVVIKADVQGS 864
Query: 762 LEALSKELQ-----EKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDA 816
EA+ + +Q + ++ + VG ++++DVM A + K GV+LGFNVK A
Sbjct: 865 AEAVKQAVQKLTTHKVKVEVIDTGVGAITESDVMRAAASK------GVVLGFNVKPESGA 918
Query: 817 EEVAKAKDVKIFVGNVIYKLI-------EDYEEWVKEEEEKKKRELLSKVTFPGVIRLYP 869
E AKA+ V + ++IY+LI E+ E ++ E + + E+ + P +
Sbjct: 919 ESAAKAEGVMLRSFSIIYELIDGVRSSMEELLEPIRTERKLGRAEVRNTFNVPKL----- 973
Query: 870 DERYVFRRSNPAIVGIEVIEGRIKPG--VTLIKQNGQK-VGVIRSIKSRDEFLQEAKKGQ 926
I G V++G IK G V L+++N Q G + S++ + ++E +G
Sbjct: 974 ----------GTIAGAAVLDGVIKRGAFVRLMRENKQLFAGKMASLRRFKDDVKEVAQGF 1023
Query: 927 AVAIAIE 933
I IE
Sbjct: 1024 ECGIGIE 1030
>dbj|BAB06132.1| (AP001515) translation initiation factor IF-2 [Bacillus halodurans]
Length = 730
Score = 162 bits (407), Expect = 1e-38
Identities = 160/546 (29%), Positives = 258/546 (46%), Gaps = 111/546 (20%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD IR T V EAGGITQHIGA +V +E K + F+DTP
Sbjct: 247 TTLLDSIRNTKVTEGEAGGITQHIGAYQVTVEGKK------------------ITFLDTP 288
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFT++RARG + D+ +LVV ++G PQT E+I + P +VA NK+D+
Sbjct: 289 GHAAFTTMRARGAQVTDITILVVAADDGVMPQTKEAISHAKAAGVPIIVAVNKMDK---- 344
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E P R +QEL +EL+ + + E V +S
Sbjct: 345 --ETANP---------DRVMQELTE--YELV---------------PEAWGGETIFVNVS 376
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G GI ELL ++ +++ E+LK + ARGT++E + G G +++ GTL
Sbjct: 377 ALTGTGIDELLEMVLLVAE---VEELKANPDRLARGTVIEAELDKGRGPVATLLVQSGTL 433
Query: 655 HKDDTIVVG---GKDKAIVT----KIRALLKPKP-----LDEIRDPRFRFD-YVDEVTA- 700
D IVVG G+ +A+V +++A+ P L+++ +F + DE A
Sbjct: 434 KVGDPIVVGSTFGRVRAMVNDEGRRVKAVGPSTPVEITGLNDVPQAGDQFQAFADEKKAR 493
Query: 701 AAGVKIAAPGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLG 760
+ G A EE A E + + ++ QI++ + ++ VI+KAD G
Sbjct: 494 SIGEARATRQKEEERA----------ETSKVSLDDLFNQIQQGEVK--EINVIIKADVQG 541
Query: 761 SLEALSKELQE-----KEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNED 815
S+EA+ L++ +I I VG ++++D++ A + +++GFNV+ +
Sbjct: 542 SVEAMRGSLEKIDVEGVKINIIHTGVGAITESDIILAAA------SNAIVIGFNVRPDGG 595
Query: 816 AEEVAKAKDVKIFVGNVIYKLIEDYEEWVK-----EEEEKKKRELLSKVTFPGVIRLYPD 870
A+ A+ + V I + VIY IE+ E +K E EEK ++ + TF V R+
Sbjct: 596 AKRTAEQEKVDIRLHRVIYNAIEEIEAAMKGMLDPEYEEKIIGQVEVRTTFK-VSRI--- 651
Query: 871 ERYVFRRSNPAIVGIEVIEGRIKPGVTL-IKQNGQKV--GVIRSIKSRDEFLQEAKKGQA 927
I G V EG+I T+ + ++G + G I ++K + ++E +G
Sbjct: 652 ---------GTIAGSYVTEGKIVRDATVRLIRDGVVIYEGSINALKRFKDDVKEVAQGYE 702
Query: 928 VAIAIE 933
I +E
Sbjct: 703 CGITLE 708
>sp|P72689|IF2_SYNY3 TRANSLATION INITIATION FACTOR IF-2 >gi|7470875|pir||S74544
translation initiation factor IF-2 - Synechocystis sp.
(strain PCC 6803) >gi|1651769|dbj|BAA16696.1| (D90900)
initiation factor IF-2 [Synechocystis sp.]
Length = 1001
Score = 161 bits (404), Expect = 3e-38
Identities = 165/548 (30%), Positives = 245/548 (44%), Gaps = 115/548 (20%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD IRKT VA EAGGITQHIGA V +E K ++F+DTP
Sbjct: 509 TTLLDSIRKTKVAQGEAGGITQHIGAYHVEVE--------------HNDKTEQIVFLDTP 554
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAFT++RARG + D+A+LVV ++G QPQT E+I + P +VA NK+D+
Sbjct: 555 GHEAFTAMRARGAKVTDIAILVVAADDGVQPQTKEAISHAKAAGVPLIVAINKVDK---- 610
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E P R QEL E G A + + + +VP+S
Sbjct: 611 --PEANP---------DRIKQELS-----------ELGLLA------EEWGGDTIMVPVS 642
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G + LL +I +S+ E+L A+GT++E + G ++I +GTL
Sbjct: 643 ALNGDNLDGLLEMILLVSE---VEELVANPNRQAKGTVIEANLDRTRGPVATLLIQNGTL 699
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEA 714
D IVVG A+ KIRA++ R D V+E + + V+I G +
Sbjct: 700 RVGDAIVVG----AVYGKIRAMIDD-----------RGDKVEEASPSFAVEILGLG-DVP 743
Query: 715 LAGSPVIAAPTPEDVE--------KAKQEILEQI---ERVVIST----------DKVGVI 753
AG +D + +Q L+Q +V +S+ ++ +I
Sbjct: 744 AAGDEFEVFTNEKDARLQAEARAMEDRQTRLQQAMSSRKVTLSSISAQAQEGELKELNII 803
Query: 754 VKADTLGSLEALSKELQ-----EKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGF 808
+KAD GSL A+ L+ E +I + A G V++TDV A + +I+GF
Sbjct: 804 LKADVQGSLGAILGSLEQLPQGEVQIRVLLASPGEVTETDVDLAAA------SGAIIIGF 857
Query: 809 NVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYE---EWVKEEEEKKKRELLSKVTFPGVI 865
N + A + A + V I ++IYKL++D + E + + EE + ++V
Sbjct: 858 NTTLASGARQAADQEGVDIREYDIIYKLLDDIQGAMEGLLDPEEIESSLGTAEV------ 911
Query: 866 RLYPDERYVFRRSNPAIVGIEVIEGRIKPGVTLIKQNGQKV---GVIRSIKSRDEFLQEA 922
R VF I G V G+I L + G +V G I S+K E ++E
Sbjct: 912 ------RAVFPVGRGNIAGCYVQSGKIIRNRNLRVRRGDQVLFEGNIDSLKRIKEDVREV 965
Query: 923 KKGQAVAI 930
G I
Sbjct: 966 NAGYECGI 973
>sp|Q9X764|IF2_LACLA TRANSLATION INITIATION FACTOR IF-2 >gi|4583983|emb|CAB40557.1|
(AJ005118) initiation factor 2 [Lactococcus lactis]
Length = 950
Score = 160 bits (401), Expect = 6e-38
Identities = 173/606 (28%), Positives = 264/606 (43%), Gaps = 118/606 (19%)
Query: 365 SKDVDYIRNIAETLVFIPVENVEEEEYD--------GYVYDLTTETHNFIANGILVH--- 413
S D D I I P++ VEE++ D GY+ + + I+ H
Sbjct: 403 SLDEDTIELILMDYGVTPLKKVEEDKSDIERLFVEDGYLNEDKMVERPAVVT-IMGHVDH 461
Query: 414 -NTTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFID 472
TTLLDR R++ V EAGGITQHIGA ++ K + F+D
Sbjct: 462 GKTTLLDRFRESRVTEGEAGGITQHIGAYQIKTNGKK------------------ITFLD 503
Query: 473 TPGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIK 532
TPGHEAFTS+RARG S+ D+ +LVV ++G PQTIE+I + P +VA NK+D+
Sbjct: 504 TPGHEAFTSMRARGASVTDITILVVAADDGVMPQTIEAINHSKAAGVPIIVAINKLDKPG 563
Query: 533 GWVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVP 592
QR QEL E G +D V
Sbjct: 564 A---------------NPQRVTQELT-----------EHGVFPVAWDPENGSE----FVE 593
Query: 593 ISAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDG 652
ISAK+ + +LL + +++ ++LK + A GT++E R + G G +++ G
Sbjct: 594 ISAKFNQNLEDLLDTVLLVAE---VQELKADPSVRAIGTVVEARLDQGKGAIATLLVQQG 650
Query: 653 TLHKDDTIVVG---GKDKAIVTKI-RALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAA 708
TLH D IVVG G+ + + + R + + P I E+T + V A
Sbjct: 651 TLHIQDPIVVGNTYGRVRTMTNDLGRRIKEAGPSTPI-----------ELTGLSDVPQA- 698
Query: 709 PGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVI-----------STDKVGVIVKAD 757
G A+ A E+ K Q I Q R V T V +I+KAD
Sbjct: 699 -GDHFAVFEDEKAARAAGEERAKRAQLIKRQNTRRVNLDNLFDTLKEGQTKSVNIIIKAD 757
Query: 758 TLGSLEALSKELQEKEIPIRKAD-----VGNVSKTDVMEALSVKEEEPKYGVILGFNVKV 812
GS EAL+ LQ+ E+ K D VG +S++D+ A + +I+GFNV+
Sbjct: 758 VQGSAEALAASLQKIEVEGVKVDIVHSAVGAISESDISLAAA------SNAIIIGFNVRP 811
Query: 813 NEDAEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEE-EEKKKRELLSKVTFPGVIRLYPDE 871
A E A ++V I + ++IYK+IE+ E + + + K E++ +
Sbjct: 812 TGLAREQAAQEEVDIRLHSIIYKVIEEVETAMHGMLDPEFKEEIIGEAIV---------- 861
Query: 872 RYVFRRSN-PAIVGIEVIEGRIKPGVTL-IKQNGQKV--GVIRSIKSRDEFLQEAKKGQA 927
R F S I G VI G++ ++ + + G + G I S+K + ++E Q
Sbjct: 862 RETFNVSKVGTIAGFMVIRGKVTRDASVRVIREGVVIHDGAIASLKHFKDDVKEVGNAQE 921
Query: 928 VAIAIE 933
+ +E
Sbjct: 922 GGLMVE 927
>gi|11467694 initiation factor IF2 [Guillardia theta]
>gi|6016314|sp|O78489|IF2C_GUITH TRANSLATION INITIATION
FACTOR IF-2, CHLOROPLAST >gi|3603019|gb|AAC35680.1|
(AF041468) initiation factor IF2 [Guillardia theta]
Length = 735
Score = 159 bits (399), Expect = 1e-37
Identities = 161/584 (27%), Positives = 271/584 (45%), Gaps = 113/584 (19%)
Query: 385 NVEEEEYDGYVYDLTTETHNFIANG-----------ILVH----NTTLLDRIRKTNVAAK 429
N++ EE +G + ++ E +NFI IL H TTLLD+IR+T +A K
Sbjct: 211 NIQIEEKNG-LNEVNIEKNNFIKFSENTIRRAPIVTILGHVDHGKTTLLDKIRQTQIAQK 269
Query: 430 EAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTSLRARGGSL 489
EAGGITQ I A +V ++ +K E + ++F+DTPGHEAF+++R+RG ++
Sbjct: 270 EAGGITQKIAAYKVNVQ------------YKNENR--NIVFLDTPGHEAFSNMRSRGINV 315
Query: 490 ADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEPFLMNIKKQ 549
D+ +L+V ++G +PQTIE+I ++ + P +VA NKID+ + NI+K
Sbjct: 316 TDIVILLVAADDGVKPQTIEAINAIKAAKLPIIVAINKIDKDQA-----------NIEKV 364
Query: 550 DQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGIAELLVLIA 609
Q E +ELI +++ + ++PISA G I LL LI
Sbjct: 365 QQ------ELSKYELI---------------PESWGGQTPMIPISASQGTNIDSLLELI- 402
Query: 610 GLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVG---GKD 666
L +E IE E A GTILE + G +++ +GTL D IV G GK
Sbjct: 403 -LLMADIENYQAIE-EDLASGTILESHIDRTRGPIASILVQNGTLKLGDIIVTGTSLGKI 460
Query: 667 KAIV----TKIRALLKPKP-----LDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALAG 717
+ ++ KI L P L++ + +F A + +
Sbjct: 461 RGMLDSEGNKINTLTPSSPGIIWGLNKSLNSGDKFQTFSNEKDAKTYFSKESENNKKITY 520
Query: 718 SPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKEL-----QEK 772
+ + P+ + +E++ ++IL I+K DT GS+EA+ + ++
Sbjct: 521 NYISENPSNQILEESSKKIL-------------NFILKTDTQGSIEAIVNAISRIKTKQL 567
Query: 773 EIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNV 832
+I I +++G V++TDV A + +L FN ++ A++ A+ ++ I NV
Sbjct: 568 QIKILYSNLGEVTETDVEFASTTN------AFVLAFNTRLAPGAKKTARQLNIDIREYNV 621
Query: 833 IYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRI 892
+Y L+ED E + + E + ++L K+ V + VF + GI + EG+I
Sbjct: 622 VYDLVEDIESLIAQHSEPEYKKL--KIGAATV-------KAVFPLGKNFVAGIIINEGKI 672
Query: 893 KPGVTLIKQNGQKV---GVIRSIKSRDEFLQEAKKGQAVAIAIE 933
+ Q + G I +IK + ++E +G + IE
Sbjct: 673 VRSAHIQVQRKSGLVFEGDITTIKIVKKDVEEVSEGNECGLFIE 716
>sp|P44323|IF2_HAEIN TRANSLATION INITIATION FACTOR IF-2 >gi|1074926|pir||E64114
translation initiation factor IF-2 - Haemophilus
influenzae (strain Rd KW20) >gi|1574742|gb|AAC22933.1|
(U32808) translation initiation factor 2 (infB)
[Haemophilus influenzae Rd]
Length = 829
Score = 157 bits (394), Expect = 4e-37
Identities = 153/536 (28%), Positives = 250/536 (46%), Gaps = 90/536 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IRK VAA EAGGITQHIGA V ++ K I F+DTP
Sbjct: 344 TSLLDYIRKAKVAAGEAGGITQHIGAYHVEMDDGKMIT-----------------FLDTP 386
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+ +
Sbjct: 387 GHAAFTSMRARGAKATDIVVLVVAADDGVMPQTIEAIQHAKAAGAPLVVAVNKIDKPEA- 445
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
N+ + +Q +Q ++I + F ++ VP+S
Sbjct: 446 ----------NLDRVEQELLQH------DVIS---------------EKFGGDVQFVPVS 474
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G G+ +LL I L LE L +G A G ++E + G G +++ GTL
Sbjct: 475 AKKGTGVDDLLDAIL-LQSEVLE--LTAVKDGMASGVVIESYLDKGRGPVATILVQSGTL 531
Query: 655 HKDDTIVVGGKDKAIVTKIRALL--KPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGL 711
K D ++ G + ++RA+ K +DE P + + AAG +
Sbjct: 532 RKGDIVLCGFE----YGRVRAMRDENGKEVDE-AGPSIPVELLGLSGVPAAGDEATVVRD 586
Query: 712 EEALAGSPVIAAPTPEDVEKAKQE--ILEQIERVVISTD--KVGVIVKADTLGSLEALSK 767
E+ + +V+ A+Q+ LE + + D ++ VIVKAD GS+EA+ +
Sbjct: 587 EKKAREVALYRQGKFREVKLARQQKAKLENMFSNMSEGDVAELNVIVKADVQGSVEAIVQ 646
Query: 768 EL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKA 822
L E ++ + + VG +++TD A + +I+GFNV+ + A V +A
Sbjct: 647 ALNELSTNEVKVKVVGSGVGGITETDATLATA------SNAIIVGFNVRADATARRVIEA 700
Query: 823 KDVKIFVGNVIYKLIEDYEEWVKEE-EEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-P 880
+++ + ++IY+L+ + + + E + K+E++ + R VFR
Sbjct: 701 ENIDLRYYSIIYELLNEIKAAMSGMLEPEFKQEIIG----------LAEVRDVFRHPKFG 750
Query: 881 AIVGIEVIEGRIKPG--VTLIKQNGQKV-GVIRSIKSRDEFLQEAKKGQAVAIAIE 933
AI G V EG +K + +++ N G + S++ + + E + G I ++
Sbjct: 751 AIAGCMVTEGVVKRNNPIRVLRDNVVIFEGELESLRRFKDDVSEVRNGMECGIGVK 806
>sp|P48515|IF2_THETH TRANSLATION INITIATION FACTOR IF-2 >gi|1072958|pir||S52276
translation initiation factor IF-2 - Thermus aquaticus
>gi|642366|emb|CAA88038.1| (Z48001) IF2 [Thermus
thermophilus]
Length = 571
Score = 157 bits (394), Expect = 4e-37
Identities = 157/593 (26%), Positives = 268/593 (44%), Gaps = 102/593 (17%)
Query: 364 DSKDVDYIRNIAETLVFIPVENVEEEEYDGYVYDLTTETHNFIANGILVHN-TTLLDRIR 422
+ KD + +R + + + + EEE L + G + H TTLLD +R
Sbjct: 39 EEKDAEAVRELVKEQRGLQEKLAEEERRKS----LPRRPPVVVIMGHVDHGKTTLLDYLR 94
Query: 423 KTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTSL 482
K+ +A KEAGGITQH+GA EV K G ++ FIDTPGHEAFT++
Sbjct: 95 KSRIAEKEAGGITQHVGAFEV-----KTPQGTVV-------------FIDTPGHEAFTTI 136
Query: 483 RARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEPF 542
R RG +AD+AV+V+ ++G PQT E+I + + A NKID + + +P
Sbjct: 137 RQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKID------LPQADP- 189
Query: 543 LMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGIA 602
+K+Q E GF + + + ++PISAK G G+
Sbjct: 190 -EKVKRQ------------------LMERGFVP------EEYGGDAIVIPISAKTGQGVQ 224
Query: 603 ELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVV 662
+LL +I L++ E + + RG ILE + + G ++++ +GT D +V
Sbjct: 225 DLLEMILLLAEL---EDYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVA 281
Query: 663 G---GKDKAIV---------TKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPG 710
G G+ +A++ + ++ E+ P ++V ++ AA +IA
Sbjct: 282 GEAYGRIRAMMDADGNQRKEAGPGSAVQVLGFQELPHPGDVVEWVPDLEAAK--EIAEER 339
Query: 711 LEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALS---- 766
EE A A P + + + + E+ ++ +I++ADT GSLEA+
Sbjct: 340 KEERKAREEEEKARRPRTMAELLRAMQEE------GRKELNLILRADTQGSLEAIQHILA 393
Query: 767 -KELQEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDV 825
+ ++ +I I A VG +++DV+ A + IL F V ++ A+ K V
Sbjct: 394 RESTEDVKINILLAQVGAPTESDVLLAQTAN------AAILAFGVNPPGSVKKKAEEKGV 447
Query: 826 KIFVGNVIYKLIEDYEEWVK-EEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVG 884
+ +IY L+++ VK + E + K E+L + + RL + + G
Sbjct: 448 LLKTFRIIYDLVDEVRNMVKGQREPQYKEEVLGQAEVRAIFRL---------PTGKQVGG 498
Query: 885 IEVIEGRIKPGVTL-IKQNGQKV--GVIRSIKSRDEFLQEAKKGQAVAIAIEG 934
V +GRI + + ++GQ + G I S+K E ++E +G I ++G
Sbjct: 499 CMVTQGRIPRNAEVRVLRDGQVIWQGRIASLKRFKEDVREVAQGYECGIGLDG 551
>pir||G83052 translation initiation factor IF-2 PA4744 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9951006|gb|AAG08130.1|AE004888_5 (AE004888)
translation initiation factor IF-2 [Pseudomonas
aeruginosa]
Length = 840
Score = 155 bits (388), Expect = 2e-36
Identities = 154/535 (28%), Positives = 240/535 (44%), Gaps = 89/535 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR+ VAA EAGGITQHIGA V E + + F+DTP
Sbjct: 356 TSLLDYIRRAKVAAGEAGGITQHIGAYHV------------------ETERGMVTFLDTP 397
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFT++RARG D+ +LVV ++G PQT E+++ + P VVA NKID+
Sbjct: 398 GHAAFTAMRARGAQATDIVILVVAADDGVMPQTQEAVQHAKAAGVPIVVAVNKIDK---- 453
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E P NIK + A ++ + W + VP+S
Sbjct: 454 --PEANP--DNIK--NGLAALDVIPEEW----------------------GGDAPFVPVS 485
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G G+ ELL + L LE LK P RG ++E R + G G V++ DGTL
Sbjct: 486 AKLGTGVDELLEAVL-LQAEVLE--LKATPSAPGRGVVVESRLDKGRGPVATVLVQDGTL 542
Query: 655 HKDDTIVVGGKDKAIVTKIRALL--KPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGL 711
+ D ++VG ++RA+L KP+ E P + + + T AG ++
Sbjct: 543 RQGDMVLVG----INYGRVRAMLDENGKPIKE-AGPSIPVEILGLDGTPDAGDEMTVVAD 597
Query: 712 EEALAGSPVIAAPTPEDVEKAKQEI--LEQIERVVISTDK--VGVIVKADTLGSLEALSK 767
E+ + +V+ A+ LE I + +K + +++KAD GSLEAL
Sbjct: 598 EKKAREVALFRQGKFREVKLARAHAGKLENIFENMGQEEKKTLNIVLKADVRGSLEALQG 657
Query: 768 EL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKA 822
L E ++ + VG ++++D AL+ V+ GFNV+ + A ++ +A
Sbjct: 658 SLSGLGNDEVQVRVVGGGVGGITESDANLALA------SNAVLFGFNVRADAGARKIVEA 711
Query: 823 KDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PA 881
+ + + NVIY +IED ++ + RE + + + R VFR A
Sbjct: 712 EGLDMRYYNVIYDIIEDVKKALTGMLGSDLRENILGIA---------EVRDVFRSPKFGA 762
Query: 882 IVGIEVIEGRIKPGVTLIKQNGQKV---GVIRSIKSRDEFLQEAKKGQAVAIAIE 933
I G V EG + + V G + S++ + + E + G I ++
Sbjct: 763 IAGCMVTEGMVHRNRPIRVLRDDVVIFEGELESLRRFKDDVAEVRAGMECGIGVK 817
>sp|Q9ZF28|IF2_KLEOX TRANSLATION INITIATION FACTOR IF-2 >gi|3850752|emb|CAA05698.1|
(AJ002735) initiation factor IF2-alpha [Klebsiella
oxytoca]
Length = 896
Score = 154 bits (386), Expect = 4e-36
Identities = 155/533 (29%), Positives = 241/533 (45%), Gaps = 85/533 (15%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 411 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 452
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 453 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPLVVAVNKIDKP--- 509
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E L + + ++G + + E +P+S
Sbjct: 510 -----------------------EADLDRVKNELSQYGVMP------EEWGGEAQFIPVS 540
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G GI +LL I L LE LK G A G ++E + G G V++ +GTL
Sbjct: 541 AKAGTGIDDLLNAIL-LQAEVLE--LKAVRNGMASGAVIESFLDKGRGPVATVLVREGTL 597
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLEE 713
HK D IV+ G + V +R L + L+ P + + AAG ++ E+
Sbjct: 598 HKGD-IVLCGFEYGRVRAMRNELGQEVLEA--GPSIPVEILGLSGVPAAGDEVTVVRDEK 654
Query: 714 ALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTD----KVGVIVKADTLGSLEALSKEL 769
+ +V+ A+Q+ + T+ +V +++KAD GS+EA+S L
Sbjct: 655 KAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSL 714
Query: 770 -----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKD 824
E ++ I + VG +++TD A + +++GFNV+ + A +V A+
Sbjct: 715 LKLSTDEVKVKIIGSGVGGITETDATLAAASN------AILVGFNVRADASARKVIDAES 768
Query: 825 VKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PAIV 883
+ + +VIY LI +E + +LS +I L + R VF+ AI
Sbjct: 769 LDLRYYSVIYHLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGAIA 819
Query: 884 GIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
G V EG IK + +++ N G + S++ + + E + G I ++
Sbjct: 820 GCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 872
>emb|CAA05699.1| (AJ002735) Initiation factor IF2-beta [Klebsiella oxytoca]
Length = 738
Score = 154 bits (386), Expect = 4e-36
Identities = 155/533 (29%), Positives = 241/533 (45%), Gaps = 85/533 (15%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 253 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 294
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 295 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPLVVAVNKIDKP--- 351
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E L + + ++G + + E +P+S
Sbjct: 352 -----------------------EADLDRVKNELSQYGVMP------EEWGGEAQFIPVS 382
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G GI +LL I L LE LK G A G ++E + G G V++ +GTL
Sbjct: 383 AKAGTGIDDLLNAIL-LQAEVLE--LKAVRNGMASGAVIESFLDKGRGPVATVLVREGTL 439
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLEE 713
HK D IV+ G + V +R L + L+ P + + AAG ++ E+
Sbjct: 440 HKGD-IVLCGFEYGRVRAMRNELGQEVLEA--GPSIPVEILGLSGVPAAGDEVTVVRDEK 496
Query: 714 ALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTD----KVGVIVKADTLGSLEALSKEL 769
+ +V+ A+Q+ + T+ +V +++KAD GS+EA+S L
Sbjct: 497 KAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSL 556
Query: 770 -----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKD 824
E ++ I + VG +++TD A + +++GFNV+ + A +V A+
Sbjct: 557 LKLSTDEVKVKIIGSGVGGITETDATLAAASN------AILVGFNVRADASARKVIDAES 610
Query: 825 VKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PAIV 883
+ + +VIY LI +E + +LS +I L + R VF+ AI
Sbjct: 611 LDLRYYSVIYHLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGAIA 661
Query: 884 GIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
G V EG IK + +++ N G + S++ + + E + G I ++
Sbjct: 662 GCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 714
>emb|CAA05700.1| (AJ002735) initiation factor IF2-gamma [Klebsiella oxytoca]
Length = 730
Score = 154 bits (386), Expect = 4e-36
Identities = 155/533 (29%), Positives = 241/533 (45%), Gaps = 85/533 (15%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 245 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 286
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 287 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPLVVAVNKIDKP--- 343
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E L + + ++G + + E +P+S
Sbjct: 344 -----------------------EADLDRVKNELSQYGVMP------EEWGGEAQFIPVS 374
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G GI +LL I L LE LK G A G ++E + G G V++ +GTL
Sbjct: 375 AKAGTGIDDLLNAIL-LQAEVLE--LKAVRNGMASGAVIESFLDKGRGPVATVLVREGTL 431
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLEE 713
HK D IV+ G + V +R L + L+ P + + AAG ++ E+
Sbjct: 432 HKGD-IVLCGFEYGRVRAMRNELGQEVLEA--GPSIPVEILGLSGVPAAGDEVTVVRDEK 488
Query: 714 ALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTD----KVGVIVKADTLGSLEALSKEL 769
+ +V+ A+Q+ + T+ +V +++KAD GS+EA+S L
Sbjct: 489 KAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSL 548
Query: 770 -----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKD 824
E ++ I + VG +++TD A + +++GFNV+ + A +V A+
Sbjct: 549 LKLSTDEVKVKIIGSGVGGITETDATLAAASN------AILVGFNVRADASARKVIDAES 602
Query: 825 VKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PAIV 883
+ + +VIY LI +E + +LS +I L + R VF+ AI
Sbjct: 603 LDLRYYSVIYHLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGAIA 653
Query: 884 GIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
G V EG IK + +++ N G + S++ + + E + G I ++
Sbjct: 654 GCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 706
>sp|P02995|IF2_ECOLI TRANSLATION INITIATION FACTOR IF-2 >gi|7428965|pir||FIEC2
translation initiation factor IF-2 [validated] -
Escherichia coli >gi|42145|emb|CAA25201.1| (X00513)
initiation factor IF2-alpha (infB) [Escherichia coli]
>gi|606108|gb|AAA57971.1| (U18997) protein chain
initiation factor 2 [Escherichia coli]
>gi|1789559|gb|AAC76202.1| (AE000397) protein chain
initiation factor IF-2 [Escherichia coli K12]
>gi|2597861|emb|CAA05529.1| (AJ002537) initiation factor
IF2-alpha [Escherichia coli] >gi|2597881|emb|CAA05544.1|
(AJ002542) Initiation factor IF2-alpha [Escherichia
coli]
Length = 890
Score = 154 bits (385), Expect = 5e-36
Identities = 159/535 (29%), Positives = 247/535 (45%), Gaps = 89/535 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA V E G++ F+DT
Sbjct: 405 TSLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDT 445
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKG 533
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 446 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK--- 502
Query: 534 WVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPI 593
E +P R EL ++G + F V +
Sbjct: 503 ---PEADP---------DRVKNELS-----------QYGILPEEWGGESQF------VHV 533
Query: 594 SAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGT 653
SAK G GI ELL I L LE LK +G A G ++E + G G V++ +GT
Sbjct: 534 SAKAGTGIDELLDAIL-LQAEVLE--LKAVRKGMASGAVIESFLDKGRGPVATVLVREGT 590
Query: 654 LHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLE 712
LHK D IV+ G + V +R L + L+ P + + AAG ++ E
Sbjct: 591 LHKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDE 647
Query: 713 EALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSK 767
+ + +V+ A+Q+ ++E + + +V +++KAD GS+EA+S
Sbjct: 648 KKAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISD 706
Query: 768 EL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKA 822
L E ++ I + VG +++TD A + +++GFNV+ + A +V +A
Sbjct: 707 SLLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIEA 760
Query: 823 KDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PA 881
+ + + +VIY LI +E + +LS +I L + R VF+ A
Sbjct: 761 ESLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGA 811
Query: 882 IVGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
I G V EG +K + +++ N G + S++ + + E + G I ++
Sbjct: 812 IAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 866
>emb|CAA25202.1| (X00513) initiation factor IF2-beta (infB; gtg start codon)
[Escherichia coli] >gi|2597862|emb|CAA05530.1|
(AJ002537) initiation factor IF2-beta [Escherichia coli]
>gi|2597882|emb|CAA05545.1| (AJ002542) Initiation factor
IF2-beta [Escherichia coli]
Length = 733
Score = 154 bits (385), Expect = 5e-36
Identities = 159/535 (29%), Positives = 247/535 (45%), Gaps = 89/535 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA V E G++ F+DT
Sbjct: 248 TSLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDT 288
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKG 533
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 289 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK--- 345
Query: 534 WVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPI 593
E +P R EL ++G + F V +
Sbjct: 346 ---PEADP---------DRVKNELS-----------QYGILPEEWGGESQF------VHV 376
Query: 594 SAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGT 653
SAK G GI ELL I L LE LK +G A G ++E + G G V++ +GT
Sbjct: 377 SAKAGTGIDELLDAIL-LQAEVLE--LKAVRKGMASGAVIESFLDKGRGPVATVLVREGT 433
Query: 654 LHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLE 712
LHK D IV+ G + V +R L + L+ P + + AAG ++ E
Sbjct: 434 LHKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDE 490
Query: 713 EALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSK 767
+ + +V+ A+Q+ ++E + + +V +++KAD GS+EA+S
Sbjct: 491 KKAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISD 549
Query: 768 EL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKA 822
L E ++ I + VG +++TD A + +++GFNV+ + A +V +A
Sbjct: 550 SLLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIEA 603
Query: 823 KDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PA 881
+ + + +VIY LI +E + +LS +I L + R VF+ A
Sbjct: 604 ESLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGA 654
Query: 882 IVGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
I G V EG +K + +++ N G + S++ + + E + G I ++
Sbjct: 655 IAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 709
>emb|CAA05546.1| (AJ002542) Initiation factor IF2-gamma [Escherichia coli]
>gi|2624078|emb|CAA05531.1| (AJ002537) initiation factor
IF2-gamma [Escherichia coli]
Length = 726
Score = 154 bits (385), Expect = 5e-36
Identities = 159/535 (29%), Positives = 247/535 (45%), Gaps = 89/535 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA V E G++ F+DT
Sbjct: 241 TSLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDT 281
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKG 533
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 282 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK--- 338
Query: 534 WVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPI 593
E +P R EL ++G + F V +
Sbjct: 339 ---PEADP---------DRVKNELS-----------QYGILPEEWGGESQF------VHV 369
Query: 594 SAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGT 653
SAK G GI ELL I L LE LK +G A G ++E + G G V++ +GT
Sbjct: 370 SAKAGTGIDELLDAIL-LQAEVLE--LKAVRKGMASGAVIESFLDKGRGPVATVLVREGT 426
Query: 654 LHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLE 712
LHK D IV+ G + V +R L + L+ P + + AAG ++ E
Sbjct: 427 LHKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDE 483
Query: 713 EALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSK 767
+ + +V+ A+Q+ ++E + + +V +++KAD GS+EA+S
Sbjct: 484 KKAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISD 542
Query: 768 EL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKA 822
L E ++ I + VG +++TD A + +++GFNV+ + A +V +A
Sbjct: 543 SLLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIEA 596
Query: 823 KDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PA 881
+ + + +VIY LI +E + +LS +I L + R VF+ A
Sbjct: 597 ESLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGA 647
Query: 882 IVGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
I G V EG +K + +++ N G + S++ + + E + G I ++
Sbjct: 648 IAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 702
>emb|CAA05535.1| (AJ002539) Initiation factor IF2-alpha [Escherichia coli]
Length = 890
Score = 153 bits (382), Expect = 1e-35
Identities = 159/535 (29%), Positives = 246/535 (45%), Gaps = 89/535 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA V E G++ F+DT
Sbjct: 405 TSLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDT 445
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKG 533
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 446 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK--- 502
Query: 534 WVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPI 593
E +P R EL ++G + F V +
Sbjct: 503 ---PEADP---------DRVKNELS-----------QYGILPEEWGGESQF------VHV 533
Query: 594 SAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGT 653
SAK G GI ELL I L LE LK +G A G ++E + G G V++ +GT
Sbjct: 534 SAKAGTGIDELLDAIL-LQAEVLE--LKAVRKGMASGAVIESFLDKGRGPVATVLVREGT 590
Query: 654 LHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLE 712
LHK D IV+ G + V +R L + L+ P + + AAG ++ E
Sbjct: 591 LHKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDE 647
Query: 713 EALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSK 767
+ + +V+ A+Q+ ++E + + +V +++KAD GS+EA+S
Sbjct: 648 KKAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEAEVHEVNIVLKADVQGSVEAISD 706
Query: 768 EL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKA 822
L E ++ I + VG +++TD A + +++GFNV+ + A +V +A
Sbjct: 707 SLLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIEA 760
Query: 823 KDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PA 881
+ + + +VIY LI +E + +LS +I L + R VF+ A
Sbjct: 761 ESLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGA 811
Query: 882 IVGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
I G V EG +K + +++ N G + S++ + + E + G I ++
Sbjct: 812 IAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 866
>pir||B82831 translation initiation factor IF-2 XF0235 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9105046|gb|AAF83048.1|AE003877_3 (AE003877)
initiation factor IF-2 [Xylella fastidiosa]
Length = 892
Score = 153 bits (382), Expect = 1e-35
Identities = 160/561 (28%), Positives = 248/561 (43%), Gaps = 105/561 (18%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGA--TEVPIEVVKKIAGPLIKLWKAEIKLPGLLFID 472
T+LLD IR+T +A EAGGITQHIGA E P V+ F+D
Sbjct: 407 TSLLDYIRRTKIAVGEAGGITQHIGAYHVETPRGVIS--------------------FLD 446
Query: 473 TPGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIK 532
TPGH AFTS+RARG + D+ VLVV ++G PQT E+++ R P +VA +KID+
Sbjct: 447 TPGHAAFTSMRARGAKITDIVVLVVAADDGVMPQTKEAVQHARAAGVPLIVAVSKIDKST 506
Query: 533 GWVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVP 592
QR EL T+ ++ + EFG + V
Sbjct: 507 A---------------DPQRVKNELLTE--SVVAE--EFG-------------GDTQFVE 534
Query: 593 ISAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDG 652
+SAK G+G+ LL I+ + LE LK +EG A GT++E + G G V++ G
Sbjct: 535 LSAKTGVGVDALLDAIS-IQAEVLE--LKAVIEGRATGTVIESSLDKGRGPVATVLVQQG 591
Query: 653 TLHKDDTIVVG---GKDKAIVTKI-RALLKPKP--------LDEIRDPRFRFDYVDEVTA 700
L K D +V G G+ +A+ ++ L P L + D F VD+
Sbjct: 592 RLKKGDYLVCGTHYGRVRALFDEVGHQPLAASPSIPVQVLGLSGVPDAGDDFVVVDDERL 651
Query: 701 AAGVKIAAPGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLG 760
A K A E S ++ + ++IL Q+ + + + +++KAD G
Sbjct: 652 A---KDVAQQREAKRRESRLVTS-----AGNRMEDILAQMGKGE-NQQVLNLLIKADVQG 702
Query: 761 SLEALSKEL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNED 815
SLEAL + L + I + VG ++++D A++ K ++GFNV+ +
Sbjct: 703 SLEALKQALVALSNDDIRINVIHVGVGGITESDANSAVTSK------ATVIGFNVRADAS 756
Query: 816 AEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVF 875
A ++ +A V + ++IY +I+ ++ + RE + V + R VF
Sbjct: 757 ARKIIEANGVDLRYFSIIYDVIDQVKQVASGLLGVEIREEIIGVA---------EVRDVF 807
Query: 876 RRSN-PAIVGIEVIEG---RIKPGVTLIKQNGQKVGVIRSIKSRDEFLQEAKKGQAVAIA 931
R S A+ G +IEG R KP L G + S++ E + E + I
Sbjct: 808 RSSKFGAVAGCMIIEGVVKRSKPIRVLRDNTVVFEGELESLRRFKENVDEVRNSTECGIG 867
Query: 932 IEG---AIVGRHIHPGETLYV 949
++ VG HI E + V
Sbjct: 868 VKAYNDVRVGDHIECFERIEV 888
>emb|CAA05532.1| (AJ002538) Initiation factor IF2-alpha [Escherichia coli]
>gi|2597873|emb|CAA05538.1| (AJ002540) Initiation factor
IF2-alpha [Escherichia coli] >gi|2597877|emb|CAA05541.1|
(AJ002541) Initiation factor IF2-alpha [Escherichia
coli]
Length = 890
Score = 153 bits (382), Expect = 1e-35
Identities = 159/535 (29%), Positives = 246/535 (45%), Gaps = 89/535 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA V E G++ F+DT
Sbjct: 405 TSLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDT 445
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKG 533
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 446 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK--- 502
Query: 534 WVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPI 593
E +P R EL ++G + F V +
Sbjct: 503 ---PEADP---------DRVKNELS-----------QYGILPEEWGGESQF------VHV 533
Query: 594 SAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGT 653
SAK G GI ELL I L LE LK +G A G ++E + G G V++ +GT
Sbjct: 534 SAKAGTGIDELLDAIL-LQAEVLE--LKAVRKGMASGAVIESFLDKGRGPVATVLVREGT 590
Query: 654 LHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLE 712
LHK D IV+ G + V +R L + L+ P + + AAG ++ E
Sbjct: 591 LHKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDE 647
Query: 713 EALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSK 767
+ + +V+ A+Q+ ++E + + +V +++KAD GS+EA+S
Sbjct: 648 KKAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISD 706
Query: 768 EL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKA 822
L E ++ I + VG +++TD A + +++GFNV+ + A +V +A
Sbjct: 707 SLLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIEA 760
Query: 823 KDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PA 881
+ + + +VIY LI +E + +LS +I L + R VF+ A
Sbjct: 761 ESLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGA 811
Query: 882 IVGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
I G V EG +K + +++ N G + S++ + + E + G I ++
Sbjct: 812 IAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 866
>emb|CAA05533.1| (AJ002538) Initiation factor IF2-beta [Escherichia coli]
>gi|2597874|emb|CAA05539.1| (AJ002540) Initiation factor
IF2-beta [Escherichia coli] >gi|2597878|emb|CAA05542.1|
(AJ002541) Initiation factor IF2-beta [Escherichia coli]
Length = 733
Score = 153 bits (382), Expect = 1e-35
Identities = 159/535 (29%), Positives = 246/535 (45%), Gaps = 89/535 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA V E G++ F+DT
Sbjct: 248 TSLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDT 288
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKG 533
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 289 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK--- 345
Query: 534 WVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPI 593
E +P R EL ++G + F V +
Sbjct: 346 ---PEADP---------DRVKNELS-----------QYGILPEEWGGESQF------VHV 376
Query: 594 SAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGT 653
SAK G GI ELL I L LE LK +G A G ++E + G G V++ +GT
Sbjct: 377 SAKAGTGIDELLDAIL-LQAEVLE--LKAVRKGMASGAVIESFLDKGRGPVATVLVREGT 433
Query: 654 LHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLE 712
LHK D IV+ G + V +R L + L+ P + + AAG ++ E
Sbjct: 434 LHKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDE 490
Query: 713 EALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSK 767
+ + +V+ A+Q+ ++E + + +V +++KAD GS+EA+S
Sbjct: 491 KKAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISD 549
Query: 768 EL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKA 822
L E ++ I + VG +++TD A + +++GFNV+ + A +V +A
Sbjct: 550 SLLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIEA 603
Query: 823 KDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PA 881
+ + + +VIY LI +E + +LS +I L + R VF+ A
Sbjct: 604 ESLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGA 654
Query: 882 IVGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
I G V EG +K + +++ N G + S++ + + E + G I ++
Sbjct: 655 IAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 709
>emb|CAA05534.1| (AJ002538) Initiation factor IF2-gamma [Escherichia coli]
>gi|2597875|emb|CAA05540.1| (AJ002540) Initiation factor
IF2-gamma [Escherichia coli] >gi|2597879|emb|CAA05543.1|
(AJ002541) Initiation factor IF2-gamma [Escherichia
coli]
Length = 726
Score = 153 bits (382), Expect = 1e-35
Identities = 159/535 (29%), Positives = 246/535 (45%), Gaps = 89/535 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA V E G++ F+DT
Sbjct: 241 TSLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDT 281
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKG 533
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 282 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK--- 338
Query: 534 WVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPI 593
E +P R EL ++G + F V +
Sbjct: 339 ---PEADP---------DRVKNELS-----------QYGILPEEWGGESQF------VHV 369
Query: 594 SAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGT 653
SAK G GI ELL I L LE LK +G A G ++E + G G V++ +GT
Sbjct: 370 SAKAGTGIDELLDAIL-LQAEVLE--LKAVRKGMASGAVIESFLDKGRGPVATVLVREGT 426
Query: 654 LHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLE 712
LHK D IV+ G + V +R L + L+ P + + AAG ++ E
Sbjct: 427 LHKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDE 483
Query: 713 EALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSK 767
+ + +V+ A+Q+ ++E + + +V +++KAD GS+EA+S
Sbjct: 484 KKAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISD 542
Query: 768 EL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKA 822
L E ++ I + VG +++TD A + +++GFNV+ + A +V +A
Sbjct: 543 SLLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIEA 596
Query: 823 KDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PA 881
+ + + +VIY LI +E + +LS +I L + R VF+ A
Sbjct: 597 ESLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGA 647
Query: 882 IVGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
I G V EG +K + +++ N G + S++ + + E + G I ++
Sbjct: 648 IAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 702
>emb|CAA05536.1| (AJ002539) Initiation factor IF2-beta [Escherichia coli]
Length = 733
Score = 153 bits (382), Expect = 1e-35
Identities = 159/535 (29%), Positives = 246/535 (45%), Gaps = 89/535 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA V E G++ F+DT
Sbjct: 248 TSLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDT 288
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKG 533
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 289 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK--- 345
Query: 534 WVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPI 593
E +P R EL ++G + F V +
Sbjct: 346 ---PEADP---------DRVKNELS-----------QYGILPEEWGGESQF------VHV 376
Query: 594 SAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGT 653
SAK G GI ELL I L LE LK +G A G ++E + G G V++ +GT
Sbjct: 377 SAKAGTGIDELLDAIL-LQAEVLE--LKAVRKGMASGAVIESFLDKGRGPVATVLVREGT 433
Query: 654 LHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLE 712
LHK D IV+ G + V +R L + L+ P + + AAG ++ E
Sbjct: 434 LHKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDE 490
Query: 713 EALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSK 767
+ + +V+ A+Q+ ++E + + +V +++KAD GS+EA+S
Sbjct: 491 KKAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEAEVHEVNIVLKADVQGSVEAISD 549
Query: 768 EL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKA 822
L E ++ I + VG +++TD A + +++GFNV+ + A +V +A
Sbjct: 550 SLLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIEA 603
Query: 823 KDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PA 881
+ + + +VIY LI +E + +LS +I L + R VF+ A
Sbjct: 604 ESLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGA 654
Query: 882 IVGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
I G V EG +K + +++ N G + S++ + + E + G I ++
Sbjct: 655 IAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 709
>emb|CAA05537.1| (AJ002539) Initiation factor IF2-gamma [Escherichia coli]
Length = 726
Score = 153 bits (382), Expect = 1e-35
Identities = 159/535 (29%), Positives = 246/535 (45%), Gaps = 89/535 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA V E G++ F+DT
Sbjct: 241 TSLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDT 281
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKG 533
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 282 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK--- 338
Query: 534 WVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPI 593
E +P R EL ++G + F V +
Sbjct: 339 ---PEADP---------DRVKNELS-----------QYGILPEEWGGESQF------VHV 369
Query: 594 SAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGT 653
SAK G GI ELL I L LE LK +G A G ++E + G G V++ +GT
Sbjct: 370 SAKAGTGIDELLDAIL-LQAEVLE--LKAVRKGMASGAVIESFLDKGRGPVATVLVREGT 426
Query: 654 LHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLE 712
LHK D IV+ G + V +R L + L+ P + + AAG ++ E
Sbjct: 427 LHKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDE 483
Query: 713 EALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSK 767
+ + +V+ A+Q+ ++E + + +V +++KAD GS+EA+S
Sbjct: 484 KKAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEAEVHEVNIVLKADVQGSVEAISD 542
Query: 768 EL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKA 822
L E ++ I + VG +++TD A + +++GFNV+ + A +V +A
Sbjct: 543 SLLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIEA 596
Query: 823 KDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PA 881
+ + + +VIY LI +E + +LS +I L + R VF+ A
Sbjct: 597 ESLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGA 647
Query: 882 IVGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
I G V EG +K + +++ N G + S++ + + E + G I ++
Sbjct: 648 IAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 702
>sp|Q9ZF22|IF2_PROVU TRANSLATION INITIATION FACTOR IF-2 >gi|3850831|emb|CAA05708.1|
(AJ002737) initiation factor IF2-alpha [Proteus
vulgaris]
Length = 917
Score = 152 bits (380), Expect = 2e-35
Identities = 157/538 (29%), Positives = 249/538 (46%), Gaps = 95/538 (17%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V + K EI F+DTP
Sbjct: 432 TSLLDYIRSTKVASGEAGGITQHIGAYHVKTD-------------KGEIT-----FLDTP 473
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG + D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 474 GHAAFTSMRARGAQVTDIVVLVVAADDGVMPQTIEAIQHAKAANVPVVVAVNKIDK---- 529
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E +P R EL ++G + +++ E + +S
Sbjct: 530 --HEADP---------DRVKTELS-----------QYGILS------EDWGGETQFMHVS 561
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G+GI ELL I L LE LK EG A G ++E + G G +++ +GTL
Sbjct: 562 AKQGLGIDELLDAIL-LQAEVLE--LKAVKEGMASGVVIESYLDKGRGPVATILVREGTL 618
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLK---PKPLDEIRDPRFRFDYVDEVTAAAGVKIAA 708
+K D ++ G G+ +A+ ++ ++ P EI DE T K A
Sbjct: 619 NKGDIVLCGFEYGRIRAMRNELGQEVQSAGPSMPVEILGLSNVPSAGDEATVVRDEKKAR 678
Query: 709 PGLEEALAGSPVIAAPTPEDVEKAKQE-ILEQIERVVISTDKVGVIVKADTLGSLEALSK 767
E AL +K+K E + +E +S ++ +++K D G+ EA++
Sbjct: 679 ---EVALYRQGKFREVKLARQQKSKLENMFANMEEGKVS--ELNIVLKTDVQGTCEAITD 733
Query: 768 EL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKA 822
L E ++ I + VG +++TD A + + +ILGFNV+ + A + +
Sbjct: 734 ALVKLSTDEVKLRIIGSGVGGITETDATLAAASE------AIILGFNVRADASARRIIEQ 787
Query: 823 KDVKIFVGNVIYKLIEDYE---EWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN 879
+ V + +VIY LI++ + + E K++ L++V R VF+
Sbjct: 788 ESVDLRYYSVIYSLIDEIKLAMSGMLAPEYKQEIMGLAEV------------RDVFKSPK 835
Query: 880 -PAIVGIEVIEGRIKPG--VTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
A+ G V+EG IK + +++ N G + S++ + + E + G I ++
Sbjct: 836 FGAVAGCMVVEGNIKRNNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 893
>emb|CAA05709.1| (AJ002737) initiation factor IF2-beta [Proteus vulgaris]
Length = 736
Score = 152 bits (380), Expect = 2e-35
Identities = 157/538 (29%), Positives = 249/538 (46%), Gaps = 95/538 (17%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V + K EI F+DTP
Sbjct: 251 TSLLDYIRSTKVASGEAGGITQHIGAYHVKTD-------------KGEIT-----FLDTP 292
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG + D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 293 GHAAFTSMRARGAQVTDIVVLVVAADDGVMPQTIEAIQHAKAANVPVVVAVNKIDK---- 348
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E +P R EL ++G + +++ E + +S
Sbjct: 349 --HEADP---------DRVKTELS-----------QYGILS------EDWGGETQFMHVS 380
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G+GI ELL I L LE LK EG A G ++E + G G +++ +GTL
Sbjct: 381 AKQGLGIDELLDAIL-LQAEVLE--LKAVKEGMASGVVIESYLDKGRGPVATILVREGTL 437
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLK---PKPLDEIRDPRFRFDYVDEVTAAAGVKIAA 708
+K D ++ G G+ +A+ ++ ++ P EI DE T K A
Sbjct: 438 NKGDIVLCGFEYGRIRAMRNELGQEVQSAGPSMPVEILGLSNVPSAGDEATVVRDEKKAR 497
Query: 709 PGLEEALAGSPVIAAPTPEDVEKAKQE-ILEQIERVVISTDKVGVIVKADTLGSLEALSK 767
E AL +K+K E + +E +S ++ +++K D G+ EA++
Sbjct: 498 ---EVALYRQGKFREVKLARQQKSKLENMFANMEEGKVS--ELNIVLKTDVQGTCEAITD 552
Query: 768 EL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKA 822
L E ++ I + VG +++TD A + + +ILGFNV+ + A + +
Sbjct: 553 ALVKLSTDEVKLRIIGSGVGGITETDATLAAASE------AIILGFNVRADASARRIIEQ 606
Query: 823 KDVKIFVGNVIYKLIEDYE---EWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN 879
+ V + +VIY LI++ + + E K++ L++V R VF+
Sbjct: 607 ESVDLRYYSVIYSLIDEIKLAMSGMLAPEYKQEIMGLAEV------------RDVFKSPK 654
Query: 880 -PAIVGIEVIEGRIKPG--VTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
A+ G V+EG IK + +++ N G + S++ + + E + G I ++
Sbjct: 655 FGAVAGCMVVEGNIKRNNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 712
>sp|Q9ZF31|IF2_SALTY TRANSLATION INITIATION FACTOR IF-2 >gi|3859102|emb|CAA05549.1|
(AJ002552) initiation factor IF2-alpha [Salmonella
typhimurium]
Length = 892
Score = 152 bits (380), Expect = 2e-35
Identities = 158/534 (29%), Positives = 244/534 (45%), Gaps = 87/534 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 407 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 448
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 449 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK---- 504
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E +P R EL ++G + F V +S
Sbjct: 505 --PEADP---------DRVKNELS-----------QYGILPEEWGGESQF------VHVS 536
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G GI ELL I L LE LK +G A G ++E + G G V++ +GTL
Sbjct: 537 AKAGTGIDELLDAIL-LQAEVLE--LKAVRKGMASGAVIESFLDKGRGPVATVLVREGTL 593
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLEE 713
HK D IV+ G + V +R L + L+ P + + AAG ++ E+
Sbjct: 594 HKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDEK 650
Query: 714 ALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSKE 768
+ +V+ A+Q+ ++E + + +V +++KAD GS+EA+S
Sbjct: 651 KAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDS 709
Query: 769 L-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAK 823
L E ++ I + VG +++TD A + +++GFNV+ + A +V +++
Sbjct: 710 LLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIESE 763
Query: 824 DVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PAI 882
+ + +VIY LI +E + +LS +I L + R VF+ AI
Sbjct: 764 SLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGAI 814
Query: 883 VGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
G V EG IK + +++ N G + S++ + + E + G I ++
Sbjct: 815 AGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 868
>emb|CAA05551.1| (AJ002552) initiation factor IF2-gamma [Salmonella typhimurium]
Length = 726
Score = 152 bits (380), Expect = 2e-35
Identities = 158/534 (29%), Positives = 244/534 (45%), Gaps = 87/534 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 241 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 282
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 283 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK---- 338
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E +P R EL ++G + F V +S
Sbjct: 339 --PEADP---------DRVKNELS-----------QYGILPEEWGGESQF------VHVS 370
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G GI ELL I L LE LK +G A G ++E + G G V++ +GTL
Sbjct: 371 AKAGTGIDELLDAIL-LQAEVLE--LKAVRKGMASGAVIESFLDKGRGPVATVLVREGTL 427
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLEE 713
HK D IV+ G + V +R L + L+ P + + AAG ++ E+
Sbjct: 428 HKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDEK 484
Query: 714 ALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSKE 768
+ +V+ A+Q+ ++E + + +V +++KAD GS+EA+S
Sbjct: 485 KAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDS 543
Query: 769 L-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAK 823
L E ++ I + VG +++TD A + +++GFNV+ + A +V +++
Sbjct: 544 LLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIESE 597
Query: 824 DVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PAI 882
+ + +VIY LI +E + +LS +I L + R VF+ AI
Sbjct: 598 SLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGAI 648
Query: 883 VGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
G V EG IK + +++ N G + S++ + + E + G I ++
Sbjct: 649 AGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 702
>emb|CAA05550.1| (AJ002552) initiation factor IF2-beta [Salmonella typhimurium]
Length = 734
Score = 152 bits (380), Expect = 2e-35
Identities = 158/534 (29%), Positives = 244/534 (45%), Gaps = 87/534 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 249 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 290
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 291 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK---- 346
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E +P R EL ++G + F V +S
Sbjct: 347 --PEADP---------DRVKNELS-----------QYGILPEEWGGESQF------VHVS 378
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G GI ELL I L LE LK +G A G ++E + G G V++ +GTL
Sbjct: 379 AKAGTGIDELLDAIL-LQAEVLE--LKAVRKGMASGAVIESFLDKGRGPVATVLVREGTL 435
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLEE 713
HK D IV+ G + V +R L + L+ P + + AAG ++ E+
Sbjct: 436 HKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDEK 492
Query: 714 ALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSKE 768
+ +V+ A+Q+ ++E + + +V +++KAD GS+EA+S
Sbjct: 493 KAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDS 551
Query: 769 L-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAK 823
L E ++ I + VG +++TD A + +++GFNV+ + A +V +++
Sbjct: 552 LLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIESE 605
Query: 824 DVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PAI 882
+ + +VIY LI +E + +LS +I L + R VF+ AI
Sbjct: 606 SLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGAI 656
Query: 883 VGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
G V EG IK + +++ N G + S++ + + E + G I ++
Sbjct: 657 AGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 710
>pir||C81060 translation initiation factor IF-2 NMB1643 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7226893|gb|AAF41992.1| (AE002514) translation
initiation factor IF-2 [Neisseria meningitidis MC58]
Length = 962
Score = 152 bits (379), Expect = 2e-35
Identities = 157/537 (29%), Positives = 248/537 (45%), Gaps = 91/537 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR+T V EAGGITQHIGA V E + F+DTP
Sbjct: 478 TSLLDYIRRTKVVQGEAGGITQHIGAYHV------------------ETPRGVITFLDTP 519
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAFT++RARG D+ +LVV ++G PQTIE+I + P VVA NKID+
Sbjct: 520 GHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK---- 575
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E P +R QEL E++ E+G ++ + +S
Sbjct: 576 --EAANP---------ERIRQELTAH--EVVPD--EWG-------------GDVQFIDVS 607
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G+ I LL + L LE L V+ PA+G I+E R + G G +++ GTL
Sbjct: 608 AKKGLNIDALLEAVL-LEAEVLE--LTAPVDAPAKGIIVEARLDKGRGAVATLLVQSGTL 664
Query: 655 HKDDTIVVG---GKDKAIVTKI-RALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPG 710
K D ++ G GK +A+V + +++ + P P D A + A
Sbjct: 665 KKGDMLLAGTAFGKIRAMVDENGKSITEAGP----SIPVEILGLSDVPNAGEDAMVLAD- 719
Query: 711 LEEALAGSPVIAAPTPEDVEKAKQEI--LEQIERVVIST--DKVGVIVKADTLGSLEALS 766
E+ + DV AKQ+ LE + + T + VI+KAD GS EAL+
Sbjct: 720 -EKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMGETQAQSLSVIIKADVQGSYEALA 778
Query: 767 KELQ-----EKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAK 821
L+ E ++ + + VG ++++DV A++ I+GFNV+ + + ++A+
Sbjct: 779 GSLKKLSTDEVKVNVLHSGVGGITESDVNLAIA------SGAFIIGFNVRADASSRKLAE 832
Query: 822 AKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPA 881
++V+I N+IY I D + + +++E ++ G + + R V S
Sbjct: 833 NENVEIRYYNIIYDAINDVKAAMSGMLSPEEKEQVT-----GTVEI----RQVISVSKVG 883
Query: 882 -IVGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIEG 934
I G V +G +K V LI+ N G + S+K + ++E + G + ++G
Sbjct: 884 NIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECGLMLKG 940
>sp|Q9Z5I9|IF2_MYCLE TRANSLATION INITIATION FACTOR IF-2 >gi|4455678|emb|CAB36570.1|
(AL035472) putative protein synthesis initiation factor
2 [Mycobacterium leprae]
Length = 924
Score = 152 bits (379), Expect = 2e-35
Identities = 135/447 (30%), Positives = 207/447 (46%), Gaps = 85/447 (19%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T LLD IRK NV EAGGITQHIGA +V +++ +L + FIDTP
Sbjct: 436 TRLLDTIRKANVREAEAGGITQHIGAYQVGVDL------------DGSERL--ITFIDTP 481
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAFT++RARG D+A+LVV ++G PQT+E+I + P VVA NKID+
Sbjct: 482 GHEAFTAMRARGAKATDIAILVVAADDGVMPQTVEAINHAQAADVPIVVAVNKIDK---- 537
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E +P ++ G+ E+G A ++F + + IS
Sbjct: 538 --EGADPA--------------------KIRGQLTEYGLVA------EDFGGDTMFIDIS 569
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G I LL + + L+ + +E A+G +E + G G V++ GTL
Sbjct: 570 AKVGTNIEALLEAVLLTADAALDLRANSGME--AQGVAIEAHLDRGRGPVATVLVQRGTL 627
Query: 655 HKDDTIVVG---GKDKAIVTK----IRALLKPKPLD-----EIRDPRFRFDYVDEVTAAA 702
D++V G G+ + +V + I A L P+ + F VDE A
Sbjct: 628 RIGDSVVAGDAYGRVRRMVDEHGVDIEAALPSSPVQVIGFTSVPGAGDNFLVVDEDRIAR 687
Query: 703 GVKIAAPGLE-EALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGS 761
+ + ALA K+ LE ++ + T ++ +I+K D G+
Sbjct: 688 QIADRRSARKRNALA------------ARSRKRISLEDLDSALKETSQLNLILKGDNAGT 735
Query: 762 LEALSKELQ----EKEIPIRKAD--VGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNED 815
+EAL + L + E+ +R D VG +++T+V A +I+GFNV+
Sbjct: 736 VEALEEALMGIQVDDEVALRVIDRGVGGITETNVNLA------SASDAIIIGFNVRAEGK 789
Query: 816 AEEVAKAKDVKIFVGNVIYKLIEDYEE 842
A E+A + V+I VIY+ I+D E+
Sbjct: 790 ATELASREGVEIRYYLVIYQAIDDIEK 816
>sp|Q9ZF25|IF2_ENTCL TRANSLATION INITIATION FACTOR IF-2 >gi|3850645|emb|CAA05703.1|
(AJ002736) initiation factor IF2-alpha [Enterobacter
cloacae]
Length = 897
Score = 151 bits (378), Expect = 3e-35
Identities = 153/534 (28%), Positives = 244/534 (45%), Gaps = 87/534 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 412 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 453
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 454 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPLVVAVNKIDK---- 509
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E + + + ++G + + E +P+S
Sbjct: 510 ----------------------PEADMDRVKNELSQYGVMP------EEWGGEAQFIPVS 541
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G GI +LL I L LE LK G A G ++E + G G V++ +GTL
Sbjct: 542 AKAGTGIDDLLNAIL-LQAEVLE--LKAIRNGMASGAVIESFLDKGRGPVATVLVREGTL 598
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLEE 713
+K D IV+ G + V +R L + L+ P + + AAG ++ E+
Sbjct: 599 NKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDEK 655
Query: 714 ALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSKE 768
+ +V+ A+Q+ ++E + + +V V++KAD GS+EA+S
Sbjct: 656 KAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEGEVHEVNVVLKADVQGSVEAISDS 714
Query: 769 L-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAK 823
L E ++ I + VG +++TD A + +++GFNV+ + A +V +++
Sbjct: 715 LLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIESE 768
Query: 824 DVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PAI 882
+ + +VIY LI +E + +LS +I L + R VF+ AI
Sbjct: 769 SLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGAI 819
Query: 883 VGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
G V EG IK + +++ N G + S++ + + E + G I ++
Sbjct: 820 AGCMVTEGNIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 873
>emb|CAA05704.1| (AJ002736) initiation factor IF2-beta [Enterobacter cloacae]
Length = 739
Score = 151 bits (378), Expect = 3e-35
Identities = 153/534 (28%), Positives = 244/534 (45%), Gaps = 87/534 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 254 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 295
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 296 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPLVVAVNKIDK---- 351
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E + + + ++G + + E +P+S
Sbjct: 352 ----------------------PEADMDRVKNELSQYGVMP------EEWGGEAQFIPVS 383
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G GI +LL I L LE LK G A G ++E + G G V++ +GTL
Sbjct: 384 AKAGTGIDDLLNAIL-LQAEVLE--LKAIRNGMASGAVIESFLDKGRGPVATVLVREGTL 440
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLEE 713
+K D IV+ G + V +R L + L+ P + + AAG ++ E+
Sbjct: 441 NKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDEK 497
Query: 714 ALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSKE 768
+ +V+ A+Q+ ++E + + +V V++KAD GS+EA+S
Sbjct: 498 KAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEGEVHEVNVVLKADVQGSVEAISDS 556
Query: 769 L-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAK 823
L E ++ I + VG +++TD A + +++GFNV+ + A +V +++
Sbjct: 557 LLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIESE 610
Query: 824 DVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PAI 882
+ + +VIY LI +E + +LS +I L + R VF+ AI
Sbjct: 611 SLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGAI 661
Query: 883 VGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
G V EG IK + +++ N G + S++ + + E + G I ++
Sbjct: 662 AGCMVTEGNIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 715
>emb|CAA05705.1| (AJ002736) initiation factor IF2-gamma [Enterobacter cloacae]
Length = 731
Score = 151 bits (378), Expect = 3e-35
Identities = 153/534 (28%), Positives = 244/534 (45%), Gaps = 87/534 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 246 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 287
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 288 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPLVVAVNKIDK---- 343
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E + + + ++G + + E +P+S
Sbjct: 344 ----------------------PEADMDRVKNELSQYGVMP------EEWGGEAQFIPVS 375
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G GI +LL I L LE LK G A G ++E + G G V++ +GTL
Sbjct: 376 AKAGTGIDDLLNAIL-LQAEVLE--LKAIRNGMASGAVIESFLDKGRGPVATVLVREGTL 432
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVD-EVTAAAGVKIAAPGLEE 713
+K D IV+ G + V +R L + L+ P + + AAG ++ E+
Sbjct: 433 NKGD-IVLCGFEYGRVRAMRNELGQEVLE--AGPSIPVEILGLSGVPAAGDEVTVVRDEK 489
Query: 714 ALAGSPVIAAPTPEDVEKAKQEILEQIERVVIS-----TDKVGVIVKADTLGSLEALSKE 768
+ +V+ A+Q+ ++E + + +V V++KAD GS+EA+S
Sbjct: 490 KAREVALYRQGKFREVKLARQQ-KSKLENMFANMTEGEVHEVNVVLKADVQGSVEAISDS 548
Query: 769 L-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAK 823
L E ++ I + VG +++TD A + +++GFNV+ + A +V +++
Sbjct: 549 LLKLSTDEVKVKIIGSGVGGITETDATLAAA------SNAILVGFNVRADASARKVIESE 602
Query: 824 DVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PAI 882
+ + +VIY LI +E + +LS +I L + R VF+ AI
Sbjct: 603 SLDLRYYSVIYNLI--------DEVKAAMSGMLSPELKQQIIGL-AEVRDVFKSPKFGAI 653
Query: 883 VGIEVIEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIE 933
G V EG IK + +++ N G + S++ + + E + G I ++
Sbjct: 654 AGCMVTEGNIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVK 707
>sp|P04766|IF2_BACST TRANSLATION INITIATION FACTOR IF-2 >gi|80212|pir||A27892
translation initiation factor IF-2 - Bacillus
stearothermophilus >gi|39954|emb|CAA27987.1| (X04399)
IF2 (aa 1-741) [Bacillus stearothermophilus]
Length = 741
Score = 150 bits (375), Expect = 7e-35
Identities = 147/509 (28%), Positives = 237/509 (45%), Gaps = 102/509 (20%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD IR + V +EAGGITQHIGA +V + K + F+DTP
Sbjct: 258 TTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDKK------------------ITFLDTP 299
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAFT++RARG + D+ +LVV ++G PQT+E+I + P +VA NK+D+
Sbjct: 300 GHEAFTTMRARGRQVTDIVILVVAADDGVMPQTVEAINHAKAANVPIIVAINKMDK---- 355
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E P R +QEL + L+ + E+G + +S
Sbjct: 356 --PEANP---------DRVMQELME--YNLVPE--EWG-------------GDTIFCKLS 387
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G+ LL +I +S+ E+LK A GT++E + + G G +++ GTL
Sbjct: 388 AKTKEGLDHLLEMILLVSEM---EELKANPNRRAVGTVIEAKLDKGRGPVATLLVQAGTL 444
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLK------PKPLDEIRD-----PRFRFDYVDEVTA 700
D IVVG G+ +A+V +K P + + D RF ++
Sbjct: 445 KVGDPIVVGTTYGRVRAMVNDSGRRVKEAGPSMPVEITGLHDVPQAGDRFMVFEDEKKAR 504
Query: 701 AAGVKIAAPGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLG 760
G A L+E + ++ ++ EQI++ + ++ +IVKAD G
Sbjct: 505 QIGEARAQRQLQEQRSVKTRVSL----------DDLFEQIKQGEMK--ELNLIVKADVQG 552
Query: 761 SLEALSKELQEKE-----IPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNED 815
S+EAL LQ+ + + I A VG ++++D+ A + +++GFNV+ + +
Sbjct: 553 SVEALVAALQKIDVEGVRVKIIHAAVGAITESDISLATA------SNAIVIGFNVRPDAN 606
Query: 816 AEEVAKAKDVKIFVGNVIYKLIEDYEEWVK-----EEEEKKKRELLSKVTFP-----GVI 865
A+ A+++ V I + +IY +IE+ E +K E EEK + + TF +
Sbjct: 607 AKRAAESEKVDIRLHRIIYNVIEEIEAAMKGMLDPEYEEKVIGQAEVRQTFKVSKVGTIA 666
Query: 866 RLYPDERYVFRRSNPAIV--GIEVIEGRI 892
Y + + R S ++ GI V EG I
Sbjct: 667 GCYVTDGKITRDSKVRLIRQGIVVYEGEI 695
>gb|AAD50011.1|AC007651_6 (AC007651) Similar to translation initiation factor IF2
[Arabidopsis thaliana]
Length = 1016
Score = 149 bits (373), Expect = 1e-34
Identities = 181/665 (27%), Positives = 292/665 (43%), Gaps = 127/665 (19%)
Query: 306 EILDFIERGSP--SLSKKIAILEGKLKAELRVLEEEGLIKDGKLTPLGRELLE-VWRNRE 362
EIL+ E G L+ +AI EG + L L +G+ DG T L RE+++ + R+ +
Sbjct: 403 EILEVEEEGMSIEDLAYNLAIGEGDI---LGYLYSKGIRPDGVHT-LDREMVKMICRDYD 458
Query: 363 FDSKDVDYIRNIAETLVFIPVENVEEEEYDGYVYDLTTETHNFIANGILVHN-TTLLDRI 421
+ D D ++ E + + +EE+ D L G + H TTLLD I
Sbjct: 459 VEVLDADSVK--VEEMAK-KRQTFDEEDLD----KLEDRPPVITIMGHVDHGKTTLLDYI 511
Query: 422 RKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTS 481
RK+ VAA EAGGITQ IGA +V + V + KL +F+DTPGHEAF +
Sbjct: 512 RKSKVAASEAGGITQGIGAYKVSVPV--------------DGKLQSCVFLDTPGHEAFGA 557
Query: 482 LRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEP 541
+RARG + D+A++VV ++G +PQT E+I + P V+A NKID+ E P
Sbjct: 558 MRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVPIVIAINKIDK------EGASP 611
Query: 542 FLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGI 601
R +QEL + IG E ++ ++ +V ISA G +
Sbjct: 612 ---------DRVMQELSS-----IGLMPE------------DWGGDVPMVQISALKGENV 645
Query: 602 AELL---VLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDD 658
+LL +L+A L ++LK A+G ++E + G I+ GTL + D
Sbjct: 646 DDLLETVMLVAEL------QELKANPHRNAKGIVIEAGLDKAKGPFATFIVQKGTLKRGD 699
Query: 659 TIVVGGKDKAIVTKIRALL--KPKPLDE----------------IRDPRFR----FDYVD 696
+V G K+RAL + +DE I F D
Sbjct: 700 VVVCG----EAFGKVRALFDHSGERVDEAGPSIPVQVIGLNNVPIAGDEFEIVSSLDVAR 755
Query: 697 EVTAAAGVKIAAPGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKA 756
E+ A V + + V + V K L+ ++ +I+K
Sbjct: 756 EMAEARAVSLRDERISAKAGDGKVTLSSLASAVSAKKMSGLD--------LHQLNIILKV 807
Query: 757 DTLGSLEALSKELQ---EKEIPIR--KADVGNVSKTDVMEALSVKEEEPKYGVILGFNVK 811
D GS+EA+ + LQ ++ + ++ G+VS +DV + S E ++ GFNVK
Sbjct: 808 DVQGSIEAVRQALQVLPQENVTLKFLLQATGDVSNSDV-DLASASE-----AIVFGFNVK 861
Query: 812 VNEDAEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDE 871
+ ++ A+ K V+I + VIY+LI+D V+ E + ++ +
Sbjct: 862 ASGSVKKAAENKGVEIRLYRVIYELIDD----VRNAMEGLLESVEEQIPIGSA-----EV 912
Query: 872 RYVFRRSNPAIVGIEVIEGRIKP--GVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAV 928
R F + + G V EG+ G+ ++++ VGV+ S+K E ++E G
Sbjct: 913 RATFSSGSGRVAGCMVNEGKFVKDCGIRVVRKGKTVHVGVLDSLKRVKENVKEVSAGLEC 972
Query: 929 AIAIE 933
I ++
Sbjct: 973 GIGMD 977
>pir||B82906 translation initiation factor IF-2 UU320 [imported] - Ureaplasma
urealyticum >gi|6899297|gb|AAF30729.1|AE002129_5
(AE002129) translation initiation factor IF-2
[Ureaplasma urealyticum]
Length = 614
Score = 149 bits (373), Expect = 1e-34
Identities = 141/492 (28%), Positives = 225/492 (45%), Gaps = 107/492 (21%)
Query: 381 IPVENVEEEEY-DGYVYDLTTETHNFIANGILVHN-TTLLDRIRKTNVAAKEAGGITQHI 438
+ EN+ E Y D DL G + H TTLLD IRK+++ A EAGGITQHI
Sbjct: 95 VNTENLLENIYFDDLEIDLVARAPIVTIMGHVDHGKTTLLDTIRKSSITASEAGGITQHI 154
Query: 439 GATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTSLRARGGSLADLAVLVVD 498
GA ++ IK +A + FIDTPGHEAFT +RARG +L D+ +LVV
Sbjct: 155 GAYQI------------IKDNRA------ITFIDTPGHEAFTEMRARGANLTDIVILVVA 196
Query: 499 INEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEPFLMNIKKQDQRAVQELE 558
++G + QT E+I+ + P +V NK+D+ + ++ + +L
Sbjct: 197 ADDGIKMQTEEAIDHAKAANVPIIVFVNKMDKYEA---------------NPEKVLNQLS 241
Query: 559 TKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGIAELL---VLIAGLSQRY 615
K E++ + E G ++ V SA GI+ELL +LIA L+
Sbjct: 242 AK--EIVAE--ELG-------------GDVVFVKGSALKNEGISELLDSILLIAELN--- 281
Query: 616 LEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVGGKDKAIVTKIRA 675
K A GT +E + G G +++ +GTL K D +VVG + KIR
Sbjct: 282 ---NYKANPNRLAYGTTIEANLDKGHGPLATLLVQNGTLRKGDYLVVG----STYGKIRN 334
Query: 676 LLKPKPLDEIRDPRFRFDYVDEVTAAAGVK-IAAPGLEEA-LAGSPVIAAPTPEDVEKAK 733
+ +Y +E+ A K + G EE AG +A +
Sbjct: 335 MFD--------------EYDNEIEIALPSKPVKVSGFEEVPTAGDKFLALADEKQARAIA 380
Query: 734 QEILE---QIERVVISTD------------KVGVIVKADTLGSLEAL-----SKELQEKE 773
++ + ++ER ++ + + +I+KAD GSLEAL S ++
Sbjct: 381 NDVKQKKMRLERAMLQSSDIRTKIANGELKNINLIIKADVQGSLEALKGIFSSINIEGVT 440
Query: 774 IPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVI 833
+ ++ +G +S++DV A + +I+GFNV+ + +++A + V+I ++I
Sbjct: 441 TTLIRSAIGTISESDVRLA------QTSDAIIIGFNVRASRIIKDLADSVGVQIMNYDII 494
Query: 834 YKLIEDYEEWVK 845
YK ED E W+K
Sbjct: 495 YKFKEDLELWMK 506
>sp|P71613|IF2_MYCTU TRANSLATION INITIATION FACTOR IF-2 >gi|7478152|pir||B70694 probable
infB - Mycobacterium tuberculosis (strain H37RV)
>gi|1648881|emb|CAB03670.1| (Z81331) infB [Mycobacterium
tuberculosis]
Length = 900
Score = 148 bits (370), Expect = 3e-34
Identities = 132/447 (29%), Positives = 206/447 (45%), Gaps = 85/447 (19%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T LLD IRK NV EAGGITQHIGA +V +++ +L + FIDTP
Sbjct: 412 TRLLDTIRKANVREAEAGGITQHIGAYQVAVDL------------DGSQRL--ITFIDTP 457
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAFT++RARG D+A+LVV ++G PQT+E+I + P VVA NKID+
Sbjct: 458 GHEAFTAMRARGAKATDIAILVVAADDGVMPQTVEAINHAQAADVPIVVAVNKIDK---- 513
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E +P ++ G+ E+G + F + V IS
Sbjct: 514 --EGADPA--------------------KIRGQLTEYGLVP------EEFGGDTMFVDIS 545
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G I L + + L+ + ++E A+G +E + G G V++ GTL
Sbjct: 546 AKQGTNIEALEEAVLLTADAALDLRANPDME--AQGVAIEAHLDRGRGPVATVLVQRGTL 603
Query: 655 HKDDTIVVG---GKDKAIVTK----IRALLKPKPLD-----EIRDPRFRFDYVDEVTAAA 702
D++V G G+ + +V + + L +P+ + F VDE A
Sbjct: 604 RVGDSVVAGDAYGRVRRMVDEHGEDVEVALPSRPVQVIGFTSVPGAGDNFLVVDEDRIAR 663
Query: 703 GVKIAAPGLE-EALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGS 761
+ + ALA K+ LE ++ + T ++ +I+K D G+
Sbjct: 664 QIADRRSARKRNALA------------ARSRKRISLEDLDSALKETSQLNLILKGDNAGT 711
Query: 762 LEALSKELQ----EKEIPIRKAD--VGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNED 815
+EAL + L + E+ +R D VG +++T+V A VI+GFNV+
Sbjct: 712 VEALEEALMGIQVDDEVVLRVIDRGVGGITETNVNLA------SASDAVIIGFNVRAEGK 765
Query: 816 AEEVAKAKDVKIFVGNVIYKLIEDYEE 842
A E+A + V+I +VIY+ I++ E+
Sbjct: 766 ATELASREGVEIRYYSVIYQAIDEIEQ 792
>sp|Q9ZCZ8|IF2_RICPR TRANSLATION INITIATION FACTOR IF-2 >gi|7443424|pir||G71659
translation initiation factor if-2 (infB) RP552 -
Rickettsia prowazekii >gi|3861101|emb|CAA15001.1|
(AJ235272) TRANSLATION INITIATION FACTOR IF-2 (infB)
[Rickettsia prowazekii]
Length = 831
Score = 146 bits (365), Expect = 1e-33
Identities = 161/605 (26%), Positives = 266/605 (43%), Gaps = 112/605 (18%)
Query: 373 NIAETLVFIPVENVEEEEY-DGYVYDLTTETHNFIANGILVHN-TTLLDRIRKTNVAAKE 430
N+ T+ + +VE D V DL T G + H T+LLD ++ T++AA E
Sbjct: 301 NLGHTVTRVQESDVENILINDDKVEDLRTRAPVVTVMGHVDHGKTSLLDALKSTDIAAGE 360
Query: 431 AGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTSLRARGGSLA 490
GGITQHIGA V + K I FIDTPGHEAF+ +R+RG +
Sbjct: 361 LGGITQHIGAYRVTLADSKAIT-----------------FIDTPGHEAFSEMRSRGAKVT 403
Query: 491 DLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEPFLMNIKKQD 550
D+ ++VV ++G + QT+E+I + P +VA NKID+
Sbjct: 404 DIVIIVVAADDGIKTQTVEAINHAKAAGVPIIVAINKIDK-------------------P 444
Query: 551 QRAVQELETKLW--ELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGIAELLVLI 608
++ ++ +L+ E+IG+ E G ++ +PISA I + +L I
Sbjct: 445 DIDIERIKNELYVHEIIGE--EAG-------------GDVIFIPISALKKINLDKLEEAI 489
Query: 609 AGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVG---GK 665
+S+ + LK G A G ++E + E G G +++ GTL D I+ G GK
Sbjct: 490 LLISEM---QDLKASPFGLASGVVIESKIEKGRGTLTTILVQRGTLRNGDIIIAGTSYGK 546
Query: 666 DKAIVT-KIRALLKPKP--------LDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALA 716
K ++ K R +L+ P L+E+ +F+ V A +
Sbjct: 547 VKKMINDKGREILEATPSVPVEIQGLNEVPFAGDQFNVVQNEKQAKDI------------ 594
Query: 717 GSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVG---VIVKADTLGSLEALSKEL---- 769
I + + A + LE++ K+ +I+K D GS+EA+S L
Sbjct: 595 AEYRIRLAKEKKISVASRSSLEELLLKASGNSKIKELPLIIKCDVQGSIEAISGSLLKLP 654
Query: 770 -QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIF 828
E ++ I + VG ++++DV A +++GFNV+ +A A+ V I
Sbjct: 655 SDEIKLRILHSGVGPITESDVSLA------HVSSAIVVGFNVRAWANALTAAEKTKVDIR 708
Query: 829 VGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN-PAIVGIEV 887
++IY LI+D + + E RE + G + + R +F + I G V
Sbjct: 709 YYSIIYNLIDDVKAIMSGMLEPIVRE-----QYIGSVEI----RQIFNITKIGKIAGSYV 759
Query: 888 IEGRIK--PGVTLIKQNGQ-KVGVIRSIKSRDEFLQEAKKGQAVAIAIEGAIVGRHIHPG 944
+G IK GV L++ N G ++++K + ++E ++G IA E I G
Sbjct: 760 TKGIIKKGAGVRLLRDNVVIHAGKLKTLKRFKDEVKEVREGYECGIAFENY---EDIREG 816
Query: 945 ETLYV 949
+T+ V
Sbjct: 817 DTVEV 821
>pir||G81709 translation initiation factor 2 TC0371 [imported] - Chlamydia
muridarum (strain Nigg) >gi|7190411|gb|AAF39229.1|
(AE002304) translation initiation factor 2 [Chlamydia
muridarum]
Length = 896
Score = 145 bits (363), Expect = 2e-33
Identities = 152/564 (26%), Positives = 241/564 (41%), Gaps = 119/564 (21%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTL+D +R++N+AA EAG ITQH+GA +K + + +DTP
Sbjct: 417 TTLIDALRQSNMAASEAGAITQHMGA------------------FKCSTPVGEITVLDTP 458
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAF+++RARG + D+ VLVV +EG + QT+E+IE + VVA NK D+
Sbjct: 459 GHEAFSAMRARGAEVCDIVVLVVAGDEGIKEQTVEAIEHAKAANITIVVAINKCDK---- 514
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
P Q A L + W +A + S
Sbjct: 515 ------PNFNEETVYRQLAELNLLPEAW----------------------GGSIATINTS 546
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G G+ +LL ++A L LE LK + ARG ++E GLG V++ +GTL
Sbjct: 547 AKTGEGLQDLLEMLA-LQAEVLE--LKADPSARARGLVIESELHKGLGAVATVLVQNGTL 603
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLK---PKPLDEIRDPRFRFDYVDEVTAAAGVKIAA 708
H + +V GK K + + LL+ P I D K+A
Sbjct: 604 HLGEALVFNDCYGKIKTMHNEHNQLLQSASPSTPVLITGLSAIPKAGDPFIVVKNEKVAK 663
Query: 709 PGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKE 768
+ LAG + A Q+ + V+ + + +I+KAD GS+EAL+
Sbjct: 664 EIISARLAG---------QQRSAALQKKRPNFDAVLQNKKTLKLIIKADVQGSIEALAHS 714
Query: 769 L-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAK 823
+ ++ ++ I + VG++S++D+ A + K ++GF+ V AE + K+
Sbjct: 715 ILNIRSEKVDVEILSSGVGDISESDIRLASASK------ATVIGFHTSVESHAESLIKSL 768
Query: 824 DVKIFVGNVIYKLIEDYEEWVKE-----EEEKKKRELLSKVTFPGVIRLYPDERYVFRRS 878
+VK+ + ++IY ++ +E + EEK K TF
Sbjct: 769 NVKVCLFDIIYHAVDAIKEIMTGLLDPIAEEKNLGAAEIKATFKS-------------SQ 815
Query: 879 NPAIVGIEVIEGRIKPGVTLIKQNGQKVGVIR-----------SIKSRDEFLQEAKKGQA 927
I G V EG T+++ QKV +IR S+K E ++E KKG
Sbjct: 816 LGTIYGCLVTEG------TMVR--NQKVRIIRDKEVLWKCSLSSLKRLKEDVKEVKKGME 867
Query: 928 VAIAIEG---AIVGRHIHPGETLY 948
I ++ A +G + E +Y
Sbjct: 868 CGILLDNYQQAQIGDTLQCYEVIY 891
>sp|Q9ZM46|IF2_HELPJ TRANSLATION INITIATION FACTOR IF-2 >gi|7465403|pir||E71940
translation initiation factor if-2 - Helicobacter pylori
(strain J99) >gi|4154899|gb|AAD05948.1| (AE001472)
TRANSLATION INITIATION FACTOR IF-2 [Helicobacter pylori
J99]
Length = 949
Score = 145 bits (363), Expect = 2e-33
Identities = 166/597 (27%), Positives = 254/597 (41%), Gaps = 106/597 (17%)
Query: 364 DSKDVDYIRNIAETL-VFIPVEN-VEEEEYDGYVYDLTTETHNFIANGILVH----NTTL 417
D D D I +AE + I V+N +EE E + + + E + I+ H T+L
Sbjct: 409 DFLDKDSIEILAEEFHLEISVQNTLEEFEVEEVLEGVKKERPPVVT--IMGHVDHGKTSL 466
Query: 418 LDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHE 477
LD+IR VA EAGGITQHIGA + E + FIDTPGHE
Sbjct: 467 LDKIRDKRVAHTEAGGITQHIGA------------------YMVEKNNKWVSFIDTPGHE 508
Query: 478 AFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIE 537
AF+ +R RG + D+AV+V+ ++G + QTIE++E + P + A NK+D+
Sbjct: 509 AFSQMRNRGAQVTDIAVIVIAADDGVKQQTIEALEHAKAANVPVIFAMNKMDK------- 561
Query: 538 EDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKY 597
N+ +A + E G+ + F +P+SAK
Sbjct: 562 ------PNVNPDKLKA-------------ECAELGYNPVDWGGEHEF------IPVSAKT 596
Query: 598 GIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKD 657
G GI LL I L Q + E IE EG AR +LE E G G VI+ GTL
Sbjct: 597 GDGIDNLLETI--LIQADIMELKAIE-EGSARAVVLEGSVEKGRGAVATVIVQSGTLSVG 653
Query: 658 DTIVVGGKDKAIVTKIRALL--KPKPLDEIRDPRFRF-DYVDEVTAAAGVKIAAPGLEEA 714
D+ + K+R + + K + ++ + EV A V I A
Sbjct: 654 DSFFA----ETAFGKVRTMTDDQGKSIQNLKPSMVALITGLSEVPPAGSVLIGVENDSIA 709
Query: 715 -LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTD--KVGVIVKADTLGSLEALSKEL-- 769
L + + K+ + +++ +V + + + VI+KADT GSLEA+ L
Sbjct: 710 RLQAQKRATYLRQKALSKSTKVSFDELSEMVANKELKNIPVIIKADTQGSLEAIKNSLLE 769
Query: 770 ---QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVK 826
+E I + + VG +++ D+ S ++ VILGFN++ + + AK +V
Sbjct: 770 LNNEEVAIQVIHSGVGGITENDLSLVSS-----SEHAVILGFNIRPTGNVKNKAKEYNVS 824
Query: 827 IFVGNVIYKLIEDYEEW-------VKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN 879
I VIY LIE + EEE + E+ P V
Sbjct: 825 IKTYTVIYALIEGMRSLLLGLMSPIIEEEHTGQAEVRETFNIPKV--------------- 869
Query: 880 PAIVGIEVIEGRIKPGV-TLIKQNGQKV--GVIRSIKSRDEFLQEAKKGQAVAIAIE 933
I G V +G I G+ + ++G V G I S+K + ++E KG I ++
Sbjct: 870 GTIAGCVVSDGEIARGIKARLIRDGVVVHTGEILSLKRFKDDVKEVSKGYECGIMLD 926
>sp|P55972|IF2_HELPY TRANSLATION INITIATION FACTOR IF-2 >gi|7443422|pir||H64650
translation initiation factor IF-2 - Helicobacter pylori
(strain 26695) >gi|2314195|gb|AAD08093.1| (AE000612)
translation initiation factor IF-2 (infB) [Helicobacter
pylori 26695]
Length = 944
Score = 144 bits (360), Expect = 4e-33
Identities = 164/597 (27%), Positives = 255/597 (42%), Gaps = 106/597 (17%)
Query: 364 DSKDVDYIRNIAETL-VFIPVEN-VEEEEYDGYVYDLTTETHNFIANGILVH----NTTL 417
D D D I +AE + I V+N +EE E + + + E + I+ H T+L
Sbjct: 404 DFLDKDSIEILAEEFHLEISVQNTLEEFEVEEVLEGVKKERPPVVT--IMGHVDHGKTSL 461
Query: 418 LDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHE 477
LD+IR VA EAGGITQHIGA + E + FIDTPGHE
Sbjct: 462 LDKIRDKRVAHTEAGGITQHIGA------------------YMVEKNDKWVSFIDTPGHE 503
Query: 478 AFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIE 537
AF+ +R RG + D+AV+V+ ++G + QTIE++E + P + A NK+D+
Sbjct: 504 AFSQMRNRGAQVTDIAVIVIAADDGVKQQTIEALEHAKAANVPVIFAMNKMDK------- 556
Query: 538 EDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKY 597
N+ +A + E G+ + F +P+SAK
Sbjct: 557 ------PNVNPDKLKA-------------ECAELGYNPVDWGGEHEF------IPVSAKT 591
Query: 598 GIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKD 657
G GI LL I L Q + E IE EG AR +LE E G G VI+ GTL
Sbjct: 592 GDGIDNLLETI--LIQAGIMELKAIE-EGSARAVVLEGSVEKGRGAVATVIVQSGTLSVG 648
Query: 658 DTIVVGGKDKAIVTKIRALL--KPKPLDEIRDPRFRF-DYVDEVTAAAGVKIAAPGLEEA 714
D+ + K+R + + K + ++ + EV A V I A
Sbjct: 649 DSFFA----ETAFGKVRTMTDDQGKSIQNLKPSMVALITGLSEVPPAGSVLIGVENDSIA 704
Query: 715 -LAGSPVIAAPTPEDVEKAKQEILEQIERVVISTD--KVGVIVKADTLGSLEALSKEL-- 769
L + + K+ + +++ +V + + + V++KADT GSLEA+ L
Sbjct: 705 RLQAQKRATYLRQKALSKSTKVSFDELSEMVANKELKNIPVVIKADTQGSLEAIKNSLLE 764
Query: 770 ---QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVK 826
+E I + + VG +++ D+ S ++ VILGFN++ + + AK +V
Sbjct: 765 LNNEEVAIQVIHSGVGGITENDLSLVSS-----SEHAVILGFNIRPTGNVKNKAKEYNVS 819
Query: 827 IFVGNVIYKLIEDYEEW-------VKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSN 879
I VIY LIE+ + EEE + E+ P V
Sbjct: 820 IKTYTVIYALIEEMRSLLLGLMSPIIEEEHTGQAEVRETFNIPKV--------------- 864
Query: 880 PAIVGIEVIEGRIKPGV-TLIKQNGQKV--GVIRSIKSRDEFLQEAKKGQAVAIAIE 933
I G V +G I G+ + ++G + G I S+K + ++E KG I ++
Sbjct: 865 GTIAGCVVSDGVIARGIKARLIRDGVVIHTGEILSLKRFKDDVKEVSKGYECGIMLD 921
>sp|O84098|IF2_CHLTR TRANSLATION INITIATION FACTOR IF-2 >gi|7443419|pir||H71558 probable
translation initiation factor IF-2 - Chlamydia
trachomatis (serotype D, strain UW3/Cx)
>gi|3328492|gb|AAC67687.1| (AE001283) Initiation
Factor-2 [Chlamydia trachomatis]
Length = 892
Score = 143 bits (356), Expect = 1e-32
Identities = 150/556 (26%), Positives = 238/556 (41%), Gaps = 103/556 (18%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TT++D +R++N+AA EAG ITQH GA +K + + +DTP
Sbjct: 413 TTIIDALRQSNMAASEAGAITQHTGA------------------FKCTTPVGEITVLDTP 454
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAF+++RARG + D+ VLVV +EG + QTIE+IE + VVA NK D+
Sbjct: 455 GHEAFSAMRARGAEVCDIVVLVVAGDEGIKEQTIEAIEHAKGANITIVVAINKCDK---- 510
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
P Q A +L + W +A + S
Sbjct: 511 ------PNFNVETVYRQLAELDLLPEAW----------------------GGSIATINTS 542
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G G+ +LL ++A L LE LK + ARG ++E GLG V++ +GTL
Sbjct: 543 AKTGEGLQDLLEMLA-LQAEVLE--LKADPSARARGLVIESELHKGLGAVATVLVQNGTL 599
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLK---PKPLDEIRDPRFRFDYVDEVTAAAGVKIAA 708
H + +V GK K + + LL+ P I D K+A
Sbjct: 600 HLGEALVFNDCYGKVKTMHDEHNQLLQSATPSTPVLITGLSAIPKAGDPFIVVKNEKVAK 659
Query: 709 PGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKE 768
+ LAG + A Q+ + V+ + + +I+KAD GS+EAL+
Sbjct: 660 EIISARLAG---------QQRSAALQKKRPNFDAVLQNKKTLKLIIKADVQGSIEALAHS 710
Query: 769 L-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAK 823
+ ++ ++ I ++VG++S++D+ A + K ++GF+ V AE + K
Sbjct: 711 ILNIRSEKVDVEILSSEVGDISESDIRLASASK------ATVIGFHTSVESHAEPLIKNL 764
Query: 824 DVKIFVGNVIYKLIEDYEEWVKE-----EEEKKKRELLSKVTFPGVIRLYPDERYVFRRS 878
+VK+ + ++IY ++ +E + EEK K TF
Sbjct: 765 NVKVCLFDIIYHAVDAIKEIMTGLLDPIAEEKNLGAAEIKATFKS-------------SQ 811
Query: 879 NPAIVGIEVIEGRIKPGVTLIKQNGQKV---GVIRSIKSRDEFLQEAKKGQAVAIAIEG- 934
I G V EG I + ++V G + S+K E ++E KKG I ++
Sbjct: 812 LGTIYGCLVTEGTIVRNQKIRIIRDKEVLWKGSLSSLKRLKEDVKEVKKGMECGILLDNY 871
Query: 935 --AIVGRHIHPGETLY 948
A VG + E +Y
Sbjct: 872 QQAQVGDILQCYEVIY 887
>sp|O83861|IF2_TREPA TRANSLATION INITIATION FACTOR IF-2 >gi|7443421|pir||H71269 probable
translation initiation factor 2 (infB) - syphilis
spirochete >gi|3323208|gb|AAC26581.1| (AE001258)
translation initiation factor 2 (infB) [Treponema
pallidum]
Length = 842
Score = 139 bits (346), Expect = 2e-31
Identities = 153/544 (28%), Positives = 236/544 (43%), Gaps = 106/544 (19%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T LD IR T VA E GGITQHIGA V + F+DTP
Sbjct: 344 TKTLDAIRSTRVAEGEFGGITQHIGAYAV------------------STPKGSITFLDTP 385
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAFT +RARG + D+ VL+V ++G PQTIE+I + + P +VA NKIDR
Sbjct: 386 GHEAFTMMRARGAEITDIVVLIVAADDGVMPQTIEAINHAKASKVPIIVAINKIDRA--- 442
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+ P ++ T+L EL E+G + V IS
Sbjct: 443 ---DANP-------------NKVMTRLAELGLAPEEWG-------------GDTMYVSIS 473
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A GIG+ LL I L +E L+ A G I+E R + G G VI+ G L
Sbjct: 474 ALQGIGLDLLLDAIM-LQAEVME--LRANYGCCAEGRIIESRIDHGRGIVASVIVRRGVL 530
Query: 655 HKDDTIVVG---GKDKAIVT----KIRALLKPKP-----LDEIRDPRFRFDYVDEVTAAA 702
DT V G G+ +AI KI+ P L+ + + F D A
Sbjct: 531 RVGDTYVAGVYSGRVRAIFNDQGEKIQEATPSMPVEILGLEGMPNAGDPFQVTDSERIAR 590
Query: 703 GVKIAAPGLEEALAGSPVIAAPTPEDVEKAKQ----EILEQIERVVISTDKVGVIVKADT 758
+ + L E+ K+ ++ E IE+ +S K VI+K D
Sbjct: 591 QISLKRQELRRY------------ENARNVKRITLDKLYESIEKGSVSEFK--VIIKGDV 636
Query: 759 LGSLEALSKELQ-----EKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVN 813
GS+EAL + L+ E ++ + + VG ++ +DVM A + I+GFNV+
Sbjct: 637 QGSVEALKQSLEKLSTDEVQLRVIHSSVGAINDSDVMLAAADSNV-----TIVGFNVRPT 691
Query: 814 EDAEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERY 873
A +A+ + V+I VIY+ +E+ E + E + K + V+ + R
Sbjct: 692 PQAAVLAERERVEIKKYTVIYQAVEEME---------RAMEGMLKPSLKEVVLGSAEVRK 742
Query: 874 VFRRSN-PAIVGIEVIEGRIK-PGVTLIKQNGQKV--GVIRSIKSRDEFLQEAKKGQAVA 929
VF+ ++ G+ V+EG +K + + ++G + G + S++ + ++E G
Sbjct: 743 VFKIPKVGSVAGVYVLEGVMKRNAIVHVVRDGIVLHSGKVSSLRREKDDVKEVHSGFECG 802
Query: 930 IAIE 933
+ +E
Sbjct: 803 VGVE 806
>gb|AAD20591.1| (AF109129) chloroplast initiation factor 2 [Euglena gracilis]
Length = 822
Score = 138 bits (345), Expect = 2e-31
Identities = 147/490 (30%), Positives = 220/490 (44%), Gaps = 101/490 (20%)
Query: 383 VENVEEEEYDGYV-----YDLTTETHNFIANGILVH--------NTTLLDRIRKTNVAAK 429
VE +E EE DG + L E ++ +V T+LLD IRK+NV A
Sbjct: 282 VEVLEVEEEDGIASMEDRFVLDEEAEALVSRPPVVTIMGHVDHGKTSLLDYIRKSNVVAG 341
Query: 430 EAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTSLRARGGSL 489
EA GITQ IGA V + A P + + FIDTPGHEAFT++RARG ++
Sbjct: 342 EASGITQAIGAYHV------EFASP------TDGTPTFISFIDTPGHEAFTAMRARGATV 389
Query: 490 ADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEPFLMNIKKQ 549
D+ ++VV ++G +PQT E+I + P VVA NKID+ + +P
Sbjct: 390 TDITIIVVAADDGVRPQTKEAIAHCKAAGVPMVVAINKIDK------DGADP-------- 435
Query: 550 DQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGIAELLVLIA 609
+R + EL QA + + E+ V ISAK G+GI ELL +I
Sbjct: 436 -ERVMNELA---------------QAGLVP--EEWGGEVPTVKISAKKGLGIKELLEMIL 477
Query: 610 GLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVG---GKD 666
++ LK PA GT++E + G V++ +GTL D +V G+
Sbjct: 478 LTAE---VADLKANPAAPAEGTVIEAYLDRTRGPVATVLVQNGTLRAGDVVVTNATWGRV 534
Query: 667 KAIVTKIRALLKPKPLDEIRDPRFRFDY--VDEVTAAAGVKIAAPGLEEALAGSPVIAAP 724
+AI+ + A+L+ P P +D+V AA G + + S A
Sbjct: 535 RAIMDEKGAMLEAAP------PSLPVQVLGLDDVPAA--------GDKFEVYASEKEARD 580
Query: 725 TPEDVEKAKQE------ILEQIERVVISTDKVG-----VIVKADTLGSLEALSKELQ--- 770
++ E+ K+E + R+ + D G VI+K D GS EA+ L
Sbjct: 581 KVDEFERTKKEKNWASLASRDLVRLDNNADGKGLEVMNVILKTDVSGSCEAIRAALDTLP 640
Query: 771 --EKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIF 828
+ E+ + A G+++ +DV A S +ILGFNV AE + K +K
Sbjct: 641 QTKIELRLILASPGDITVSDVNLAASTG------SIILGFNVDTFSAAEALIKNLGIKCM 694
Query: 829 VGNVIYKLIE 838
+VIY L++
Sbjct: 695 TFDVIYDLVD 704
>gi|11465723 initiation factor 2 [Porphyra purpurea]
>gi|1708414|sp|P51257|IF2C_PORPU TRANSLATION INITIATION
FACTOR IF-2, CHLOROPLAST >gi|2147601|pir||S73178
translation initiation factor IF-2 - red alga (Porphyra
purpurea) chloroplast >gi|1276723|gb|AAC08143.1|
(U38804) initiation factor 2 [Porphyra purpurea]
Length = 763
Score = 137 bits (342), Expect = 5e-31
Identities = 147/539 (27%), Positives = 236/539 (43%), Gaps = 97/539 (17%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD I K+N A KE GGITQ+I A EV E K ++F+DTP
Sbjct: 277 TSLLDYIHKSNNANKEVGGITQNIVAYEV------------------EFKHQQIVFLDTP 318
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAFTS+R+RG +L D+A++++ ++G +PQTIE+I+ L+K PF+VA +KID+
Sbjct: 319 GHEAFTSMRSRGANLTDIAIIIIAADDGIKPQTIEAIQHLQKANVPFIVAISKIDK---- 374
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
L ++ K V + + E +G + I+PIS
Sbjct: 375 -------NLDSVDKIQHDLV--AQNVISEKLG-------------------GSVPIIPIS 406
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
+ G I +LL I L++ E L+ + A+G I+E + G ++I +GTL
Sbjct: 407 SVTGENIDKLLETILLLAEL---ENLQADPTQLAQGVIIEAHLDKFHGPAATLLIQNGTL 463
Query: 655 HKDDTIVVG---GKDKAIVTKIRA---LLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAA 708
H D +V+G K +AI+ + L P + EI + V A V +
Sbjct: 464 HIGDNMVIGMTHAKIRAIINNAKQKINLAAPSSVVEIWG-------LSSVPATGEVALVV 516
Query: 709 PGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVIST-------DKVGVIVKADTLGS 761
+EA + T + + ++ + +I IST +V +I+K D GS
Sbjct: 517 NSDKEAKL-KAIENESTNSIIVQKQKSLNSRITLDTISTINAKDENKQVTLIIKTDNQGS 575
Query: 762 LEALSKELQE-----KEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDA 816
EA+ L + ++ + G ++ TDV A + ++GFN +
Sbjct: 576 TEAILDSLSQFPQSKVQLNVLSIFPGEITATDVELASTTNSS------LIGFNTNFAPGS 629
Query: 817 EEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFR 876
+ A +V I +IY LIE E K E L + V + VF
Sbjct: 630 RQAAAKLNVIIENYQIIYALIEGVRE---------KMETLLDPEYSEVPVGEAEVGTVFS 680
Query: 877 RSNPAIVGIEVIEGRI--KPGVTLIKQNG-QKVGVIRSIKSRDEFLQEAKKGQAVAIAI 932
+N I G V ++ + ++++N G I S+K E ++E + G I I
Sbjct: 681 LANRKIAGCRVTNNKLLKNSWIKVLRENEIVYQGKIESLKRIREDVEEIQAGNECGIFI 739
>sp|Q9Z8M1|IF2_CHLPN TRANSLATION INITIATION FACTOR IF-2 >gi|7443420|pir||F72093
translation initiation factor IF-2 - Chlamydophila
pneumoniae (strain CWL029) >gi|4376594|gb|AAD18466.1|
(AE001616) Initiation Factor-2 [Chlamydophila pneumoniae
CWL029]
Length = 890
Score = 137 bits (341), Expect = 7e-31
Identities = 151/570 (26%), Positives = 244/570 (42%), Gaps = 131/570 (22%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTL+D +RK+NVAA EAG ITQH+GA + + + +DTP
Sbjct: 411 TTLIDSLRKSNVAATEAGAITQHMGA------------------FCCSTPVGDITILDTP 452
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAF+++RARG + D+ VLVV +EG + QT+E+IE + VVA NK D+
Sbjct: 453 GHEAFSAMRARGAEVCDIVVLVVAGDEGIKEQTLEAIEHAKAADIAIVVAINKCDK---- 508
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
P + Q + L + W V S
Sbjct: 509 ------PNFNSETIYRQLSEINLLPEAW----------------------GGSTVTVNTS 540
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G G++ELL ++A L LE LK + ARG ++E GLG V+I +G+L
Sbjct: 541 AKTGEGLSELLEMLA-LQAEVLE--LKADPSARARGLVIESELHKGLGPVATVLIQNGSL 597
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGL 711
+ +V GK K + + L+K A + + GL
Sbjct: 598 KLGEALVFNDCYGKVKTMHNEHNELMK--------------------EAGPSIPVLITGL 637
Query: 712 EE-ALAGSPVIAA---PTPEDVEKAK----------QEILEQIERVVISTDKVGVIVKAD 757
+ AG P T D+ +A+ Q+ + ++ + + +++KAD
Sbjct: 638 SDIPKAGDPFFVVKNEKTARDIIEARSAGQQRFALQQKKRPNFDSMLQNKKTLKLMIKAD 697
Query: 758 TLGSLEAL----SKELQEK-EIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKV 812
GS+EAL SK EK ++ I VG +S++D+ A + K V++GF+ +
Sbjct: 698 VQGSIEALVSSISKIKSEKVDVEILTNSVGEISESDIRLAAASK------AVLIGFHTGI 751
Query: 813 NEDAEEVAKAKDVKIFVGNVIYKLIEDYEEW-------VKEEEEKKKRELLSKVTFPGVI 865
AE + K+ V++ + VIY I+ +E + EE+++ E+
Sbjct: 752 ESHAEPLIKSLGVRVELFTVIYHAIDAIKEIMTSLLDPIAEEKDEGSAEI---------- 801
Query: 866 RLYPDERYVFRRSN-PAIVGIEVIEGRIKPGVTLIKQNGQKV---GVIRSIKSRDEFLQE 921
+ +FR S +I G V EG + + +++ G + S+K E ++E
Sbjct: 802 ------KEIFRSSQVGSIYGCIVTEGIMTRNHKVRVLRNKEILWKGTLSSLKRVKEDVKE 855
Query: 922 AKKGQAVAIAIEG---AIVGRHIHPGETLY 948
+KG I +EG A +G + E +Y
Sbjct: 856 VRKGLECGILLEGYQQAQIGDVLQCYEVIY 885
>pir||E81576 translation initiation factor 2 CP0440 [imported] - Chlamydophila
pneumoniae (strain AR39) >gi|7189362|gb|AAF38279.1|
(AE002205) translation initiation factor 2
[Chlamydophila pneumoniae AR39]
>gi|8978691|dbj|BAA98527.1| (AP002546) initiation
factor-2 [Chlamydophila pneumoniae J138]
Length = 890
Score = 137 bits (341), Expect = 7e-31
Identities = 151/570 (26%), Positives = 244/570 (42%), Gaps = 131/570 (22%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTL+D +RK+NVAA EAG ITQH+GA + + + +DTP
Sbjct: 411 TTLIDSLRKSNVAATEAGAITQHMGA------------------FCCSTPVGDITILDTP 452
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAF+++RARG + D+ VLVV +EG + QT+E+IE + VVA NK D+
Sbjct: 453 GHEAFSAMRARGAEVCDIVVLVVAGDEGIKEQTLEAIEHAKAADIAIVVAINKCDK---- 508
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
P + Q + L + W V S
Sbjct: 509 ------PNFNSETIYRQLSEINLLPEAW----------------------GGSTVTVNTS 540
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G G++ELL ++A L LE LK + ARG ++E GLG V+I +G+L
Sbjct: 541 AKTGEGLSELLEMLA-LQAEVLE--LKADPSARARGLVIESELHKGLGPVATVLIQNGSL 597
Query: 655 HKDDTIVVG---GKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGL 711
+ +V GK K + + L+K A + + GL
Sbjct: 598 KLGEALVFNDCYGKVKTMHNEHNELMK--------------------EAGPSIPVLITGL 637
Query: 712 EE-ALAGSPVIAA---PTPEDVEKAK----------QEILEQIERVVISTDKVGVIVKAD 757
+ AG P T D+ +A+ Q+ + ++ + + +++KAD
Sbjct: 638 SDIPKAGDPFFVVKNEKTARDIIEARSAGQQRFALQQKKRPNFDSMLQNKKTLKLMIKAD 697
Query: 758 TLGSLEAL----SKELQEK-EIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKV 812
GS+EAL SK EK ++ I VG +S++D+ A + K V++GF+ +
Sbjct: 698 VQGSIEALVSSISKIKSEKVDVEILTNSVGEISESDIRLAAASK------AVLIGFHTGI 751
Query: 813 NEDAEEVAKAKDVKIFVGNVIYKLIEDYEEW-------VKEEEEKKKRELLSKVTFPGVI 865
AE + K+ V++ + VIY I+ +E + EE+++ E+
Sbjct: 752 ESHAEPLIKSLGVRVELFTVIYHAIDAIKEIMTSLLDPIAEEKDEGSAEI---------- 801
Query: 866 RLYPDERYVFRRSN-PAIVGIEVIEGRIKPGVTLIKQNGQKV---GVIRSIKSRDEFLQE 921
+ +FR S +I G V EG + + +++ G + S+K E ++E
Sbjct: 802 ------KEIFRSSQVGSIYGCIVTEGIMTRNHKVRVLRNKEILWKGTLSSLKRVKEDVKE 855
Query: 922 AKKGQAVAIAIEG---AIVGRHIHPGETLY 948
+KG I +EG A +G + E +Y
Sbjct: 856 VRKGLECGILLEGYQQAQIGDVLQCYEVIY 885
>sp|O59683|IF2M_SCHPO TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIAL PRECURSOR
(IF-2MT) (IF-2(MT)) >gi|7493515|pir||T39351 translation
initiation factor IF-2 precursor, mitochondrial -
fission yeast (Schizosaccharomyces pombe)
>gi|3925784|emb|CAA22205.1| (AL034353) putative
translation initiation factor if-2, mitochondrial
precursor [Schizosaccharomyces pombe]
Length = 686
Score = 137 bits (341), Expect = 7e-31
Identities = 147/541 (27%), Positives = 236/541 (43%), Gaps = 84/541 (15%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD RK+ +A+ E GGITQ IGA VP + K + F+DTP
Sbjct: 185 TTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKF----------------ITFLDTP 228
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AF ++R RG ++AD+ VLVV ++G +PQT+E+I+ ++ P VVA K DR G
Sbjct: 229 GHMAFEAMRKRGANIADIVVLVVAGDDGVKPQTVEAIKHIQSADVPVVVALTKSDR-PGT 287
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
I K++E + N +V+ E I+PIS
Sbjct: 288 PIH----------------------KIYEQL---------LNNGIQVEALGGETQIIPIS 316
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G GI EL I L++ +++ P +G I+E G+G + V++ GT+
Sbjct: 317 AKTGKGIPELEAAILTLAEIM---EIRASPRDPFQGWIVESSVTKGVGSSATVVVKRGTV 373
Query: 655 HKDDTIVVGG---KDKAIVTKIRALLK---PKPLDEI---RDPRFRFDYVDEVTAAAGVK 705
K +V G K +++V + +K P ++ +D D EV + + K
Sbjct: 374 KKGMYLVAGKSWCKVRSLVDVNKKSIKQVLPGQAAQVYGWKDLPIAGDLAYEVKSESEAK 433
Query: 706 IAAPGLEEALAGSPVIAAPTPEDVEK-----AKQEILEQIERVVISTDKVGVIVKADTLG 760
+ ++ ++ AK+ I+ + +I K + G
Sbjct: 434 RILSDIYRQSNEQNFYELAESQNEQRVSALAAKKSGPAAIQEETSVSKSFNIIAKCEDTG 493
Query: 761 SLEALS---KELQEKEIPIR--KADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNED 815
S+EALS K LQ ++ R VG V++TD+ A E +I+ F V V +
Sbjct: 494 SMEALSDYLKPLQFGKVKSRVLYTGVGPVTETDIERA------ETSDAIIISFGVSVPKA 547
Query: 816 AEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVF 875
+A+ +VK+ NVIY L++D K + L+ +VT +I D +
Sbjct: 548 TFRLAEKHNVKLLFHNVIYHLMDDVR---KLFALRLPPILVQRVTGEAIISAIFDIK--A 602
Query: 876 RRSNPAIVGIEVIEGRIKPGVTLIKQNGQKV---GVIRSIKSRDEFLQEAKKGQAVAIAI 932
+R+ + G V G I+ + K+ G I S+K E + KKG+ I +
Sbjct: 603 KRAVVHVAGCRVTNGTIEKSHKIRLVRNDKIIWSGEIDSLKHLKEEVTSIKKGRECGILL 662
Query: 933 E 933
+
Sbjct: 663 K 663
>sp|P47388|IF2_MYCGE TRANSLATION INITIATION FACTOR IF-2 >gi|1361878|pir||G64215
translation initiation factor IF-2 - Mycoplasma
genitalium >gi|3844735|gb|AAC71360.1| (U39695)
translation initiation factor 2 (infB) [Mycoplasma
genitalium]
Length = 619
Score = 131 bits (326), Expect = 4e-29
Identities = 154/542 (28%), Positives = 240/542 (43%), Gaps = 103/542 (19%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IRKTNV AKE GGITQ IGA +V K I FIDTP
Sbjct: 136 TSLLDTIRKTNVTAKEFGGITQKIGAYQVKNHQNKTIT-----------------FIDTP 178
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAFT +RARG + D+ VLVV ++G + QT E+I + TP +V NK+D+
Sbjct: 179 GHEAFTLMRARGAKVTDIVVLVVAADDGIKKQTEEAISHAKSANTPIIVFINKMDK---- 234
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRV-QNFTRELAIVPI 593
P L+ +Q+L N+FD V + + + V
Sbjct: 235 --PTANPDLV---------IQQL------------------NKFDLVPEAWGGKTIFVMG 265
Query: 594 SAKYGIGIAELL--VLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYD 651
SA G GI ELL +L+ G + Y + + G +EV+ GLG +VI+
Sbjct: 266 SALTGQGINELLDNILLLGEVEGY-----QANYNAHSSGYAIEVQTSKGLGPIANVIVKR 320
Query: 652 GTLHKDDTIVVGGKDKAIVT----KIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIA 707
GTL D +V+G + T +L + P ++ F ++ AG K
Sbjct: 321 GTLKLGDIVVLGPAYGRVRTMHDENGNSLKQATPSKPVQISGF------DIMPVAGEKFI 374
Query: 708 APGLEEALAGSPVIAAPTPEDVEK------AKQEILEQIERVVISTDKVGVIVKADTLGS 761
E+ + +IA E ++ Q + EQI+ I + +I KAD+ GS
Sbjct: 375 VFDDEK---DAKLIANKFKEQQKQKANNLTVNQTLKEQIKNKEIKI--LNLIFKADSDGS 429
Query: 762 LEALSKELQ-----EKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDA 816
L+A+ + ++ + + I A VG +S++D+M A + ++ N+ +++
Sbjct: 430 LQAIKQAVENINVAKISLSIIHAAVGQISESDIMLA------KASGALLFSLNLGLSQTV 483
Query: 817 EEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFR 876
+ +A + VK+ V I KL E+ E +K + + E+ ++ V++L+ F
Sbjct: 484 KNIASLQGVKLEVHYHIPKLAEEIENILKGQLDPVYEEI--EIGKAEVLQLW------FH 535
Query: 877 RSNPAIVGIEVIEGRIKPGVTLIKQNGQK----VGVIRSIKSRDEFLQEAKKGQAVAIAI 932
I G V G+IK G L K K G I S+K+ + + G+ I I
Sbjct: 536 SKIGNIAGTIVKSGKIKRG-NLCKLFRDKEIIFEGRIDSLKNEKTPVNLIETGKNCGIVI 594
Query: 933 EG 934
G
Sbjct: 595 NG 596
>gi|6324550 mitochondrial initiation factor 2; Ifm1p [Saccharomyces cerevisiae]
>gi|2506776|sp|P25038|IF2M_YEAST TRANSLATION INITIATION
FACTOR IF-2, MITOCHONDRIAL PRECURSOR (IF-2MT) (IF-2(MT))
>gi|2133189|pir||S66706 translation initiation factor
IF-2, mitochondrial - yeast (Saccharomyces cerevisiae)
>gi|1419805|emb|CAA99023.1| (Z74765) ORF YOL023w
[Saccharomyces cerevisiae]
Length = 676
Score = 130 bits (324), Expect = 7e-29
Identities = 146/569 (25%), Positives = 242/569 (41%), Gaps = 95/569 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TT++D +RK++V A+E GGITQHIGA ++ K + F+DTP
Sbjct: 159 TTIIDYLRKSSVVAQEHGGITQHIGAFQITAPKSGK----------------KITFLDTP 202
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AF +R RG ++ D+ VLVV + + PQT+E+I+ + ++A KIDRI
Sbjct: 203 GHAAFLKMRERGANITDIIVLVVSVEDSLMPQTLEAIKHAKNSGNEMIIAITKIDRI--- 259
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+P +E E K+ ++I G V+ ++ ++PIS
Sbjct: 260 ----PQP-------------KEREKKIEKVINDLIVQGIP------VEKIGGDVQVIPIS 296
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G + L I LS+ ++ + + + A G I+E + + +G+ V++ GTL
Sbjct: 297 AKTGENMDLLEESIVLLSE-VMDIRAENSPKTIAEGWIIESQVKKQVGNVATVLVKKGTL 355
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIR-DPRFRFDYV---------DEVTAAAGV 704
K ++ G KI+ L+ K + ++ P + + + DEV
Sbjct: 356 QKGKILICGN----TFCKIKNLIDDKGIPILKATPSYATEVLGWKDVPHVGDEVIQVKSE 411
Query: 705 KIA------APGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTDK--------V 750
IA L E S ++ E +Q + +++E + +
Sbjct: 412 AIAKKFISKRQDLIEVQKNSSIVEKLNEERALAKEQHLNKELEHENTVQEHEQNTGPKLI 471
Query: 751 GVIVKADTLGSLEALSKEL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVI 805
I+K D GS EA+S+ + E + + VG +++D +K + I
Sbjct: 472 NYIIKCDVSGSAEAVSESISSLGNDEVRCNVISSSVGIPTESD------LKMAQITESTI 525
Query: 806 LGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVI 865
L FN+ N +E + +KI NVIYKLIED E + E K K+ +
Sbjct: 526 LCFNLG-NLPSEVINNRAGIKIKQYNVIYKLIEDVTETL---TENLKPIFEKKIVSTVDV 581
Query: 866 RLYPDERYVFRRSNPAIVGIEVIEGRIKPG--VTLIKQNGQKV---GVIRSIKSRDEFLQ 920
R D R ++ I G +V G IK V +++ + V G I ++K + +
Sbjct: 582 RETFDFR--LKKKIIRIAGCKVNNGVIKKNSLVQVVRGPNEDVIFDGKISTLKHNKDDVA 639
Query: 921 EAKKGQAVAIAIEGAIVGRHIHPGETLYV 949
E KG I E G PG+ + V
Sbjct: 640 EVSKGHECGITFESGFEG--FKPGDKILV 666
>emb|CAA41268.1| (X58379) mitochondrial initiation factor 2 [Saccharomyces
cerevisiae]
Length = 676
Score = 130 bits (323), Expect = 9e-29
Identities = 146/569 (25%), Positives = 242/569 (41%), Gaps = 95/569 (16%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TT++D +RK++V A+E GGITQHIGA ++ K + F+DTP
Sbjct: 159 TTIIDYLRKSSVVAQEHGGITQHIGAFQITAPKSGK----------------KITFLDTP 202
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AF +R RG ++ D+ VLVV + + PQT+E+I+ + ++A KIDRI
Sbjct: 203 GHAAFLKMRERGANITDIIVLVVSVEDSLMPQTLEAIKHAKNSGNEMIIAITKIDRI--- 259
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
+P +E E K+ ++I G V+ ++ ++PIS
Sbjct: 260 ----PQP-------------KEREKKIEKVINDLIVQGIP------VEKIGGDVQVIPIS 296
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G + L I LS+ ++ + + + A G I+E + + +G+ V++ GTL
Sbjct: 297 AKTGENMDLLEESIVLLSE-VMDIRAENSPKTIAEGWIIESQVKKQVGNVATVLVKKGTL 355
Query: 655 HKDDTIVVGGKDKAIVTKIRALLKPKPLDEIR-DPRFRFDYV---------DEVTAAAGV 704
K ++ G KI+ L+ K + ++ P + + + DEV
Sbjct: 356 QKGKILICGN----TFCKIKNLIDDKGIPILKATPSYATEVLGWKDVPHVGDEVIQVKSE 411
Query: 705 KIA------APGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVISTD--------KV 750
IA L E S ++ E +Q + +++E + +
Sbjct: 412 AIAKKFISKRQDLIEVQKNSSIVEKLNEERALAKEQHLNKELEHENTVQEYEQNTGPKLI 471
Query: 751 GVIVKADTLGSLEALSKEL-----QEKEIPIRKADVGNVSKTDVMEALSVKEEEPKYGVI 805
I+K D GS EA+S+ + E + + VG +++D +K + I
Sbjct: 472 NYIIKCDVSGSAEAVSESISSLGNDEVRCNVISSSVGIPTESD------LKMAQITESTI 525
Query: 806 LGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEEEEKKKRELLSKVTFPGVI 865
L FN+ N +E + +KI NVIYKLIED E + E K K+ +
Sbjct: 526 LCFNLG-NLPSEVINNRAGIKIKQYNVIYKLIEDVTETL---TENLKPIFEKKIVSTVDV 581
Query: 866 RLYPDERYVFRRSNPAIVGIEVIEGRIKPG--VTLIKQNGQKV---GVIRSIKSRDEFLQ 920
R D R ++ I G +V G IK V +++ + V G I ++K + +
Sbjct: 582 RETFDFR--LKKKIIRIAGCKVNNGVIKKNSLVQVVRGPNEDVIFDGKISTLKHNKDDVA 639
Query: 921 EAKKGQAVAIAIEGAIVGRHIHPGETLYV 949
E KG I E G PG+ + V
Sbjct: 640 EVSKGHECGITFESGFEG--FKPGDKILV 666
>gb|AAC63272.1| (AF069739) translation initiation factor 2 [Apis mellifera]
Length = 718
Score = 129 bits (321), Expect = 2e-28
Identities = 130/472 (27%), Positives = 209/472 (43%), Gaps = 103/472 (21%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD +R T++A E GGITQ IGA +V +E +++ F+DTP
Sbjct: 187 TTLLDALRNTSIAKSEFGGITQCIGAFDVTLESGERVT-----------------FLDTP 229
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AF S+R RG + D+ VLVV ++G + QT++SIE+ + + P +VA NKID+
Sbjct: 230 GHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVPIIVAINKIDK---- 285
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
P + IK Q + A + ++ E+ V IS
Sbjct: 286 ------PNIDIIKVQYELAKHGIV----------------------IEELGGEIQCVKIS 317
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A GI + EL I + Q L + LK ++EG G I++ G G + +I GTL
Sbjct: 318 ALKGINLRELTEAI--IVQAELMD-LKGDLEGLVEGVIIDCSNHIGRGKLVTALIQRGTL 374
Query: 655 HKDDTIVVGGKDKAIVTKI-----RALLKPKPLDEIRDPRFRF--DYVDEVTAAAGVKIA 707
K ++V G A V + +LK KP + ++ ++ + DE+ KI
Sbjct: 375 -KKGCLLVSGIASAKVRSMFNDSGNPILKAKPSEVVQILGWKELPNVGDEILEVENDKIL 433
Query: 708 APGLE-------EALAGSPVIAAPTPED---VEKAK-----------QEILEQIERVVIS 746
++ E LA AA + +E K ++I++ + +I
Sbjct: 434 QEVIKFRQKQRAEILAKEHKAAADQKLEKHLIEYKKMLKIKRLFGKDRKIMDMVREKIIE 493
Query: 747 ----------TDKVGVIVKADTLGSLEALSKELQEK------EIPIRKADVGNVSKTDVM 790
T V +IVK D GS+EAL ++ I +G ++++D+
Sbjct: 494 EKRKNKNKNLTPAVNIIVKGDVAGSVEALLDIFDTYTYDTICQLNIVHYGIGFITQSDIE 553
Query: 791 EALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEE 842
A + K +I GFNV + ++ A K V + NV+YKLI++ ++
Sbjct: 554 LANTFK------AIIYGFNVNATKQIKDEANKKGVSLRFYNVVYKLIDNIKK 599
>emb|CAB91142.1| (AL355913) putative translation initiation factor IF-2(fragment)
[Streptomyces coelicolor A3(2)]
Length = 835
Score = 129 bits (320), Expect = 2e-28
Identities = 100/280 (35%), Positives = 136/280 (47%), Gaps = 49/280 (17%)
Query: 385 NVEEEEYDGYVYDLTTETHNFIANGILVHNTT-LLDRIRKTNVAAKEAGGITQHIGATEV 443
++E E +G DL G + H T LLD IRKTNV A EAGGITQHIGA +V
Sbjct: 511 DLEFGEDEGSEEDLVVRPPVVTVMGHVDHGKTRLLDAIRKTNVIAGEAGGITQHIGAYQV 570
Query: 444 PIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTSLRARGGSLADLAVLVVDINEGF 503
EV + E K+ FIDTPGHEAFT++RARG D+A+LVV N+G
Sbjct: 571 ATEVNDE-----------ERKIT---FIDTPGHEAFTAMRARGARSTDIAILVVAANDGV 616
Query: 504 QPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEPFLMNIKKQDQRAVQELETKLWE 563
PQT+E++ + P VVA NKID +E +P +
Sbjct: 617 MPQTVEALNHAKAAEVPIVVAVNKID------VEGADP--------------------TK 650
Query: 564 LIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGIAELLVLIAGLSQRYLEEKLKIE 623
+ G+ E+G A + + + V ISAK G+ I LL + + L+ L+
Sbjct: 651 VRGQLTEYGLVA------EEYGGDTMFVDISAKQGLHIDSLLEAVVLTADASLD--LRAN 702
Query: 624 VEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVG 663
A+G +E R + G G V++ GTL DT+VVG
Sbjct: 703 PVQDAQGISIESRLDRGRGAVATVLVQRGTLRVGDTMVVG 742
>emb|CAA12734.1| (AJ227963) translational initiation factor IF2 [Enterobacter
cloacae]
Length = 286
Score = 123 bits (307), Expect = 7e-27
Identities = 89/250 (35%), Positives = 122/250 (48%), Gaps = 55/250 (22%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA V E G++ F+DT
Sbjct: 2 TSLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDT 42
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKG 533
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 43 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPLVVAVNKIDK--- 99
Query: 534 WVIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPI 593
E + + + ++G + + E +P+
Sbjct: 100 -----------------------PEADMDRVKNELSQYGVMP------EEWGGEAQFIPV 130
Query: 594 SAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGT 653
SAK G GI +LL I L LE LK +G A G ++E + G G V++ +GT
Sbjct: 131 SAKAGTGIDDLLNAIL-LQAEVLE--LKAVRKGMASGAVIESFLDKGRGPVATVLVREGT 187
Query: 654 LHKDDTIVVG 663
LHK D ++ G
Sbjct: 188 LHKGDIVLCG 197
>emb|CAA12736.1| (AJ227965) translational initiation factor IF2 [Enterobacter
aerogenes]
Length = 286
Score = 122 bits (303), Expect = 2e-26
Identities = 87/249 (34%), Positives = 119/249 (46%), Gaps = 53/249 (21%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 2 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 43
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQT+E+I+ + + P VVA NKID+
Sbjct: 44 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAAQVPVVVAVNKIDK---- 99
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E + + + ++G + + E +P+S
Sbjct: 100 ----------------------PEADMDRVKNELSQYGVMP------EEWGGEAQFIPVS 131
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
AK G GI +LL I L LE LK G A G ++E + G G V++ +GTL
Sbjct: 132 AKVGTGIDDLLNAIL-LQAEVLE--LKAVRNGMASGAVIESFLDKGRGPVATVLVREGTL 188
Query: 655 HKDDTIVVG 663
HK D ++ G
Sbjct: 189 HKGDIVLCG 197
>emb|CAA12767.1| (AJ227996) translational initiation factor IF2 [Enterobacter
cloacae]
Length = 284
Score = 116 bits (289), Expect = 9e-25
Identities = 85/248 (34%), Positives = 118/248 (47%), Gaps = 53/248 (21%)
Query: 416 TLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPG 475
+LLD IR T VA+ EAGGITQHIGA V E + F+DTPG
Sbjct: 1 SLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTPG 42
Query: 476 HEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWV 535
H AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 43 HAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPLVVAVNKIDK----- 97
Query: 536 IEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISA 595
E + + + ++G + + E +P+SA
Sbjct: 98 ---------------------PEADMDRVKNELSQYGVMP------EEWGGEAQFIPVSA 130
Query: 596 KYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLH 655
K G GI +LL I L LE LK +G + G ++E + G G V++ +GTL
Sbjct: 131 KAGTGIDDLLNAIL-LQAEVLE--LKAVRKGMSNGAVIESFLDKGRGPVATVLVREGTLD 187
Query: 656 KDDTIVVG 663
K D ++ G
Sbjct: 188 KGDIVLCG 195
>gi|4505277 mitochondrial translational initiation factor 2 precursor; IF-2mt
[Homo sapiens] >gi|1170499|sp|P46199|IF2M_HUMAN
TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIAL
PRECURSOR (IF-2MT) (IF-2(MT)) >gi|1082869|pir||A55628
translation initiation factor IF-2 precursor,
mitochondrial - human >gi|609492|gb|AAA67038.1| (L34600)
initiation factor 2 [Homo sapiens]
Length = 727
Score = 116 bits (288), Expect = 1e-24
Identities = 84/249 (33%), Positives = 119/249 (47%), Gaps = 52/249 (20%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD+ RKT VAA E GGITQHIGA V + +KI F+DTP
Sbjct: 194 TTLLDKFRKTQVAAVETGGITQHIGAFLVSLPSGEKIT-----------------FLDTP 236
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AF+++RARG + D+ VLVV ++G QT+ESI+ + + P ++A NK D+
Sbjct: 237 GHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAQVPIILAVNKCDK---- 292
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E +P +KK E ++++ + Y QA VP+S
Sbjct: 293 --AEADP--EKVKK---------ELLAYDVVCEDYGGDVQA---------------VPVS 324
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G + L L++ +LK + GP GT++E + G G II GTL
Sbjct: 325 ALTGDNLMALAEATVALAEML---ELKADPNGPVEGTVIESFTDKGRGLVTTAIIQRGTL 381
Query: 655 HKDDTIVVG 663
K +V G
Sbjct: 382 RKGSVLVAG 390
>gi|11428756 mitochondrial translational initiation factor 2 precursor [Homo
sapiens]
Length = 727
Score = 116 bits (288), Expect = 1e-24
Identities = 84/249 (33%), Positives = 119/249 (47%), Gaps = 52/249 (20%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD+ RKT VAA E GGITQHIGA V + +KI F+DTP
Sbjct: 194 TTLLDKFRKTQVAAVETGGITQHIGAFLVSLPSGEKIT-----------------FLDTP 236
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AF+++RARG + D+ VLVV ++G QT+ESI+ + + P ++A NK D+
Sbjct: 237 GHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAQVPIILAVNKCDK---- 292
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E +P +KK E ++++ + Y QA VP+S
Sbjct: 293 --AEADP--EKVKK---------ELLAYDVVCEDYGGDVQA---------------VPVS 324
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
A G + L L++ +LK + GP GT++E + G G II GTL
Sbjct: 325 ALTGDNLMALAEATVALAEML---ELKADPNGPVEGTVIESFTDKGRGLVTTAIIQRGTL 381
Query: 655 HKDDTIVVG 663
K +V G
Sbjct: 382 RKGSVLVAG 390
>sp|P46198|IF2M_BOVIN TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIAL PRECURSOR
(IF-2MT) (IF-2(MT)) >gi|1083094|pir||S53707 translation
initiation factor eIF-2 - bovine
>gi|624234|gb|AAB05558.1| (L37835) Mitochondrial
translational initiation factor 2 [Bos taurus]
>gi|1095515|prf||2109238A initiation factor 2 [Bos
taurus]
Length = 727
Score = 110 bits (272), Expect = 9e-23
Identities = 80/249 (32%), Positives = 121/249 (48%), Gaps = 52/249 (20%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TTLLD++RKT VAA EAGGITQHIGA V + +KI F+DTP
Sbjct: 194 TTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGEKIT-----------------FLDTP 236
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AF+++RARG + D+ +LVV ++G QT+ESI+ + P V+A NK D+
Sbjct: 237 GHAAFSAMRARGTQVTDIVILVVAADDGVMKQTVESIQHAKDAHVPIVLAINKCDK---- 292
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E +P +KK E ++++ + Y QA + + ++
Sbjct: 293 --AEADP--EKVKK---------ELLAYDVVCEDYGGDVQA------------VHVSALT 327
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTL 654
+ + +AE + +A + + LK + G GT++E + G G II GTL
Sbjct: 328 GENMMALAEATIALAEMLE------LKADPTGAVEGTVIESFTDKGRGPVTTAIIQRGTL 381
Query: 655 HKDDTIVVG 663
K +V G
Sbjct: 382 RKGSILVAG 390
>gb|AAB58905.1| (U74759) [Chlamydia trachomatis]
Length = 676
Score = 108 bits (268), Expect = 3e-22
Identities = 86/268 (32%), Positives = 126/268 (46%), Gaps = 58/268 (21%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
TT++D +R++N+AA EAG ITQH GA +K + + +DTP
Sbjct: 417 TTIIDALRQSNMAASEAGAITQHTGA------------------FKCTTPVGEITVLDTP 458
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GHEAF+++RARG + D+ VLVV +EG + QTIE+IE + VVA NK D+
Sbjct: 459 GHEAFSAMRARGAEVCDIVVLVVAGDEGIKKQTIEAIEHAKGANITIVVAINKCDKPN-- 516
Query: 535 VIEEDEPFLMNIKK-QDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPI 593
N+K Q A +L + W +A +
Sbjct: 517 ---------FNVKTVYRQLAKLDLLPEAW----------------------GGSIATINT 545
Query: 594 SAKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGT 653
SAK G G+ +LL ++A L LE LK + ARG ++E GLG V++ +GT
Sbjct: 546 SAKTGEGLQDLLEMLA-LQAEVLE--LKADPSARARGLVIESELHKGLGAVATVLVQNGT 602
Query: 654 LHKDDTIVVG---GKDKAIVTKIRALLK 678
LH + +V GK K + + LL+
Sbjct: 603 LHLGEALVFNDCYGKVKTMHDEHNQLLQ 630
>emb|CAA12744.1| (AJ227973) translational initiation factor IF2 [Serratia
liquefaciens]
Length = 158
Score = 102 bits (253), Expect = 1e-20
Identities = 80/205 (39%), Positives = 98/205 (47%), Gaps = 51/205 (24%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VAA EAGGITQHIGA V E + F+DTP
Sbjct: 2 TSLLDYIRSTKVAAGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 43
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 44 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPLVVAVNKIDK---- 99
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E +P R QEL ++G + + E V +S
Sbjct: 100 --PEADP---------DRVKQELS-----------QYGVMP------EEWGGEAQFVHVS 131
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEK 619
AK G GI ELL I L LE K
Sbjct: 132 AKAGTGIDELLNAIL-LQSEVLELK 155
>emb|CAA12743.1| (AJ227972) translational initiation factor IF2 [Proteus mirabilis]
>gi|4481928|emb|CAA12754.1| (AJ227983) translational
initiation factor IF2 [Proteus mirabilis]
Length = 159
Score = 101 bits (248), Expect = 6e-20
Identities = 82/212 (38%), Positives = 103/212 (47%), Gaps = 53/212 (25%)
Query: 417 LLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGH 476
LLD IR T VA+ EAGGITQHIGA V + K EI F+DTPGH
Sbjct: 1 LLDYIRSTKVASGEAGGITQHIGAYHVKTD-------------KGEIT-----FLDTPGH 42
Query: 477 EAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVI 536
AFTS+RARG + D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 43 AAFTSMRARGAQVTDIVVLVVAADDGVMPQTIEAIQHAKAANVPVVVAVNKIDK------ 96
Query: 537 EEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAK 596
E +P R EL ++G +++ E + +SAK
Sbjct: 97 PEADP---------DRVKTELS-----------QYGILP------EDWGGETQFIHVSAK 130
Query: 597 YGIGIAELLVLIAGLSQRYLEEKLKIEVEGPA 628
G+GI ELL I L LE LK EG A
Sbjct: 131 QGLGIDELLDAIL-LQAEVLE--LKAVKEGMA 159
>emb|CAA12762.1| (AJ227991) translational initiation factor IF2 [Proteus mirabilis]
Length = 162
Score = 101 bits (248), Expect = 6e-20
Identities = 82/212 (38%), Positives = 103/212 (47%), Gaps = 53/212 (25%)
Query: 417 LLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGH 476
LLD IR T VA+ EAGGITQHIGA V + K EI F+DTPGH
Sbjct: 4 LLDYIRSTKVASGEAGGITQHIGAYHVKTD-------------KGEIT-----FLDTPGH 45
Query: 477 EAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVI 536
AFTS+RARG + D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 46 AAFTSMRARGAQVTDIVVLVVAADDGVMPQTIEAIQHAKAANVPVVVAVNKIDK------ 99
Query: 537 EEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAK 596
E +P R EL ++G +++ E + +SAK
Sbjct: 100 PEADP---------DRVKTELS-----------QYGILP------EDWGGETQFIHVSAK 133
Query: 597 YGIGIAELLVLIAGLSQRYLEEKLKIEVEGPA 628
G+GI ELL I L LE LK EG A
Sbjct: 134 QGLGIDELLDAIL-LQAEVLE--LKAVKEGMA 162
>emb|CAA05391.1| (AJ002407) translational initiation factor IF2 [Escherichia coli]
Length = 161
Score = 100 bits (247), Expect = 7e-20
Identities = 57/117 (48%), Positives = 72/117 (60%), Gaps = 20/117 (17%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA +V E G++ F+DT
Sbjct: 1 TSLLDYIRSTKVASGEAGGITQHIGAYQVETE-------------------NGMITFLDT 41
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDR 530
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 42 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK 98
>emb|CAA12748.1| (AJ227977) translational initiation factor IF2 [Klebsiella oxytoca]
Length = 160
Score = 100 bits (246), Expect = 1e-19
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 50/191 (26%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 1 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 42
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 43 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPLVVAVNKIDK---- 98
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E L + + ++G + + E +P+S
Sbjct: 99 ----------------------PEADLDRVKNELSQYGVMP------EEWGGEAQFIPVS 130
Query: 595 AKYGIGIAELL 605
AK G GI +LL
Sbjct: 131 AKAGTGIDDLL 141
>emb|CAA12753.1| (AJ227982) translational initiation factor IF2 [Klebsiella oxytoca]
Length = 156
Score = 100 bits (246), Expect = 1e-19
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 50/191 (26%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 2 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 43
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 44 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPLVVAVNKIDK---- 99
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E L + + ++G + + E +P+S
Sbjct: 100 ----------------------PEADLDRVKNELSQYGVMP------EEWGGEAQFIPVS 131
Query: 595 AKYGIGIAELL 605
AK G GI +LL
Sbjct: 132 AKAGTGIDDLL 142
>emb|CAA05392.1| (AJ002408) translational initiation factor IF2 [Escherichia coli]
Length = 162
Score = 99.8 bits (245), Expect = 1e-19
Identities = 57/117 (48%), Positives = 71/117 (59%), Gaps = 20/117 (17%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA V E G++ F+DT
Sbjct: 2 TSLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDT 42
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDR 530
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 43 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK 99
>emb|CAA05386.1| (AJ002402) translational initiation factor IF2 [Escherichia coli]
Length = 153
Score = 99.8 bits (245), Expect = 1e-19
Identities = 57/117 (48%), Positives = 71/117 (59%), Gaps = 20/117 (17%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA V E G++ F+DT
Sbjct: 14 TSLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDT 54
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDR 530
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 55 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK 111
>emb|CAA12765.1| (AJ227994) translational initiation factor IF2 [Klebsiella
pneumoniae]
Length = 166
Score = 99.1 bits (243), Expect = 2e-19
Identities = 56/116 (48%), Positives = 69/116 (59%), Gaps = 18/116 (15%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 6 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 47
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDR 530
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 48 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK 103
>emb|CAA12740.1| (AJ227969) translational initiation factor IF2 [Escherichia coli]
Length = 159
Score = 98.7 bits (242), Expect = 3e-19
Identities = 57/117 (48%), Positives = 70/117 (59%), Gaps = 20/117 (17%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD IR T VA+ EAGGITQHIGA V E G++ F+DT
Sbjct: 2 TSLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDT 42
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDR 530
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 43 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK 99
>emb|CAA12732.1| (AJ227961) translational initiation factor IF2 [Citrobacter
freundii]
Length = 159
Score = 98.3 bits (241), Expect = 4e-19
Identities = 73/191 (38%), Positives = 90/191 (46%), Gaps = 50/191 (26%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 1 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 42
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 43 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK---- 98
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E +P R EL ++G + F V +S
Sbjct: 99 --PEADP---------DRVKNELS-----------QYGIMPEEWGGESQF------VHVS 130
Query: 595 AKYGIGIAELL 605
AK G GI ELL
Sbjct: 131 AKAGTGIDELL 141
>emb|CAA12739.1| (AJ227968) translational initiation factor IF2 [Klebsiella oxytoca]
Length = 165
Score = 98.3 bits (241), Expect = 4e-19
Identities = 82/216 (37%), Positives = 100/216 (45%), Gaps = 53/216 (24%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 2 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 43
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGW 534
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 44 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK---- 99
Query: 535 VIEEDEPFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPIS 594
E +P R EL ++G + F V +S
Sbjct: 100 --PEADP---------DRVKNELS-----------QYGILPEEWGGESQF------VHVS 131
Query: 595 AKYGIGIAELLVLIAGLSQRYLEEKLKIEVEGPARG 630
AK G GI ELL I L LE LK +G A G
Sbjct: 132 AKAGTGIDELLDAIL-LQAEVLE--LKAVRKGMASG 164
>emb|CAA05389.1| (AJ002405) translational initiation factor IF2 [Escherichia coli]
Length = 160
Score = 97.9 bits (240), Expect = 5e-19
Identities = 56/116 (48%), Positives = 70/116 (60%), Gaps = 20/116 (17%)
Query: 416 TLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDTP 474
+LLD IR T VA+ EAGGITQHIGA V E G++ F+DTP
Sbjct: 1 SLLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDTP 41
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDR 530
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 42 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK 97
>emb|CAA12749.1| (AJ227978) translational initiation factor IF2 [Hafnia alvei]
Length = 158
Score = 97.9 bits (240), Expect = 5e-19
Identities = 55/117 (47%), Positives = 71/117 (60%), Gaps = 20/117 (17%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDT 473
T+LLD +R T VA+ EAGGITQHIGA V + G++ F+DT
Sbjct: 1 TSLLDYMRSTKVASGEAGGITQHIGAYHVQTD-------------------NGMITFLDT 41
Query: 474 PGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDR 530
PGH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 42 PGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAKVPVVVAVNKIDK 98
>emb|CAA12758.1| (AJ227987) translational initiation factor IF2 [Salmonella
enteritidis]
Length = 155
Score = 97.9 bits (240), Expect = 5e-19
Identities = 56/116 (48%), Positives = 68/116 (58%), Gaps = 18/116 (15%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 1 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 42
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDR 530
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 43 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK 98
>emb|CAA12747.1| (AJ227976) translational initiation factor IF2 [Salmonella
typhimurium]
Length = 161
Score = 97.9 bits (240), Expect = 5e-19
Identities = 56/116 (48%), Positives = 68/116 (58%), Gaps = 18/116 (15%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T VA+ EAGGITQHIGA V E + F+DTP
Sbjct: 2 TSLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 43
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDR 530
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + P VVA NKID+
Sbjct: 44 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDK 99
>emb|CAA05387.1| (AJ002403) translational initiation factor IF2 [Escherichia coli]
Length = 158
Score = 97.5 bits (239), Expect = 6e-19
Identities = 56/115 (48%), Positives = 69/115 (59%), Gaps = 20/115 (17%)
Query: 417 LLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLL-FIDTPG 475
LLD IR T VA+ EAGGITQHIGA V E G++ F+DTPG
Sbjct: 1 LLDYIRSTKVASGEAGGITQHIGAYHVETE-------------------NGMITFLDTPG 41
Query: 476 HEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDR 530
H AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 42 HAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK 96
>emb|CAA12761.1| (AJ227990) translational initiation factor IF2 [Klebsiella
pneumoniae]
Length = 161
Score = 97.5 bits (239), Expect = 6e-19
Identities = 55/116 (47%), Positives = 68/116 (58%), Gaps = 18/116 (15%)
Query: 415 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTP 474
T+LLD IR T V + EAGGITQHIGA V E + F+DTP
Sbjct: 1 TSLLDYIRSTKVVSGEAGGITQHIGAYHV------------------ETDNGMITFLDTP 42
Query: 475 GHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDR 530
GH AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 43 GHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK 98
>emb|CAA12763.1| (AJ227992) translational initiation factor IF2 [Klebsiella
pneumoniae]
Length = 161
Score = 97.1 bits (238), Expect = 8e-19
Identities = 55/115 (47%), Positives = 68/115 (58%), Gaps = 18/115 (15%)
Query: 416 TLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPG 475
+LLD IR T VA+ EAGGITQHIGA V E + F+DTPG
Sbjct: 2 SLLDYIRSTKVASGEAGGITQHIGAYHV------------------ETDNGMITFLDTPG 43
Query: 476 HEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDR 530
H AFTS+RARG D+ VLVV ++G PQTIE+I+ + + P VVA NKID+
Sbjct: 44 HAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK 98
>emb|CAA12742.1| (AJ227971) translational initiation factor IF2 [Listeria
monocytogenes]
Length = 161
Score = 92.1 bits (225), Expect = 3e-17
Identities = 66/192 (34%), Positives = 90/192 (46%), Gaps = 50/192 (26%)
Query: 422 RKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTS 481
R T V EAGGITQHIGA ++ I K + F+DTPGH AFT+
Sbjct: 8 RNTKVTLGEAGGITQHIGAYQLEIHDKK------------------ITFLDTPGHAAFTA 49
Query: 482 LRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEP 541
+RARG + D+ +LVV ++G PQTIE+I + P +VA NKID+ +
Sbjct: 50 MRARGAQITDITILVVAADDGVMPQTIEAINHAKAAGMPIIVAVNKIDKPQA-------- 101
Query: 542 FLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGI 601
R +QEL YE +A D + PISAK+G G+
Sbjct: 102 -------NPDRVMQELTE---------YELVPEAWGGDTI--------FAPISAKFGEGL 137
Query: 602 AELLVLIAGLSQ 613
LL +I +S+
Sbjct: 138 ENLLDMILLVSE 149
>emb|CAA12759.1| (AJ227988) translational initiation factor IF2 [Listeria
monocytogenes]
Length = 157
Score = 92.1 bits (225), Expect = 3e-17
Identities = 66/192 (34%), Positives = 90/192 (46%), Gaps = 50/192 (26%)
Query: 422 RKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTS 481
R T V EAGGITQHIGA ++ I K + F+DTPGH AFT+
Sbjct: 4 RNTKVTLGEAGGITQHIGAYQLEIHDKK------------------ITFLDTPGHAAFTA 45
Query: 482 LRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEP 541
+RARG + D+ +LVV ++G PQTIE+I + P +VA NKID+ +
Sbjct: 46 MRARGAQITDITILVVAADDGVMPQTIEAINHAKAAGMPIIVAVNKIDKPQA-------- 97
Query: 542 FLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGI 601
R +QEL YE +A D + PISAK+G G+
Sbjct: 98 -------NPDRVMQELTE---------YELVPEAWGGDTI--------FAPISAKFGEGL 133
Query: 602 AELLVLIAGLSQ 613
LL +I +S+
Sbjct: 134 ENLLDMILLVSE 145
>emb|CAA12760.1| (AJ227989) translational initiation factor IF2 [Listeria
monocytogenes]
Length = 158
Score = 92.1 bits (225), Expect = 3e-17
Identities = 66/192 (34%), Positives = 90/192 (46%), Gaps = 50/192 (26%)
Query: 422 RKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTS 481
R T V EAGGITQHIGA ++ I K + F+DTPGH AFT+
Sbjct: 5 RNTKVTLGEAGGITQHIGAYQLEIHDKK------------------ITFLDTPGHAAFTA 46
Query: 482 LRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEP 541
+RARG + D+ +LVV ++G PQTIE+I + P +VA NKID+ +
Sbjct: 47 MRARGAQITDITILVVAADDGVMPQTIEAINHAKAAGMPIIVAVNKIDKPQA-------- 98
Query: 542 FLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIGI 601
R +QEL YE +A D + PISAK+G G+
Sbjct: 99 -------NPDRVMQELTE---------YELVPEAWGGDTI--------FAPISAKFGEGL 134
Query: 602 AELLVLIAGLSQ 613
LL +I +S+
Sbjct: 135 ENLLDMILLVSE 146
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.139 0.389
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 367534636
Number of Sequences: 2977
Number of extensions: 16521158
Number of successful extensions: 56255
Number of sequences better than 1.0e-10: 145
Number of HSP's better than 0.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 55412
Number of HSP's gapped (non-prelim): 460
length of query: 992
length of database: 189,106,746
effective HSP length: 60
effective length of query: 932
effective length of database: 153,197,526
effective search space: 142780094232
effective search space used: 142780094232
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 170 (70.6 bits)