BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0758 (htpX) DE:heat shock protein (htpX)
(289 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75094 heat shock protein (htpx) PAB0758 - Pyrococcus abyss... 571 e-162
sp|O58997|HTPX_PYRHO PROBABLE PROTEASE HTPX HOMOLOG >gi|7441958|... 545 e-154
sp|O67798|HTPX_AQUAE PROBABLE PROTEASE HTPX HOMOLOG >gi|7441961|... 308 5e-83
sp|Q59076|HTPX_METJA PROBABLE PROTEASE HTPX HOMOLOG >gi|2127959|... 293 2e-78
emb|CAC08262.1| (AL392146) putative peptidase [Streptomyces coel... 244 1e-63
sp|O06429|HTPX_MYCTU PROBABLE PROTEASE HTPX HOMOLOG >gi|7441963|... 220 2e-56
sp|O30795|HTPX_STRGC PROBABLE PROTEASE HTPX HOMOLOG >gi|11277180... 218 7e-56
emb|CAB58284.1| (AL121850) protease HtpX homolog (EC 3.4.24.-) [... 182 3e-45
sp|O26669|HTPX_METTH PROBABLE PROTEASE HTPX HOMOLOG >gi|7428778|... 160 2e-38
sp|Q9YD67|HTPX_AERPE PROBABLE PROTEASE HTPX HOMOLOG >gi|7521111|... 129 3e-29
gb|AAG18751.1| (AE004980) heat shock protein; Hsp4 [Halobacteriu... 129 4e-29
pir||D83293 heat shock protein HtpX PA2830 [imported] - Pseudomo... 117 2e-25
emb|CAC11990.1| (AL445065) heat shock protein (htpx) related pro... 114 1e-24
sp|P44840|HTPX_HAEIN PROBABLE PROTEASE HTPX >gi|1074178|pir||H64... 114 1e-24
sp|P23894|HTPX_ECOLI PROBABLE PROTEASE HTPX (HEAT SHOCK PROTEIN ... 112 4e-24
sp|Q9ZKS4|HTPX_HELPJ PROBABLE PROTEASE HTPX HOMOLOG >gi|7441959|... 109 3e-23
pir||G64635 heat shock protein - Helicobacter pylori (strain 266... 108 7e-23
sp|O25582|HTPX_HELPY PROBABLE PROTEASE HTPX HOMOLOG 108 7e-23
pir||E82239 heat shock protein HtpX VC1117 [imported] - Vibrio c... 106 3e-22
gi|11497851 heat shock protein (htpX) [Archaeoglobus fulgidus] >... 106 4e-22
pir||E81154 heat shock protein HtpX NMB0822 [imported] - Neisser... 102 4e-21
pir||E81951 probable membrane-bound zinc metallopeptidase (EC 3.... 102 4e-21
pir||B82534 heat shock protein XF2625 [imported] - Xylella fasti... 101 1e-20
emb|CAA71000.1| (Y09872) small heat shock protein [Plasmodium vi... 98 2e-19
sp|O31657|HTPX_BACSU PROBABLE PROTEASE HTPX HOMOLOG >gi|7428777|... 97 2e-19
dbj|BAB06421.1| (AP001516) heat-shock protein [Bacillus halodurans] 94 1e-18
gb|AAK43325.1| Heat shock protein (htpX-2) [Sulfolobus solfatari... 90 4e-17
sp|P57406|HTPX_BUCAI PROBABLE PROTEASE HTPX HOMOLOG >gi|10038995... 89 8e-17
gb|AAK42047.1| Heat shock protein (htpX-1) [Sulfolobus solfatari... 87 2e-16
pir||H69109 heat shock protein X related protein - Methanobacter... 82 6e-15
pir||D71037 hypothetical protein PH1588 - Pyrococcus horikoshii ... 76 6e-13
pir||A75177 heat shock protein (htpx) PAB1974 - Pyrococcus abyss... 73 5e-12
pir||S76474 hypothetical protein - Synechocystis sp. (strain PCC... 71 2e-11
>pir||A75094 heat shock protein (htpx) PAB0758 - Pyrococcus abyssi (strain
Orsay) >gi|5458566|emb|CAB50054.1| (AJ248286) heat shock
protein (htpX) [Pyrococcus abyssi]
Length = 289
Score = 571 bits (1456), Expect = e-162
Identities = 289/289 (100%), Positives = 289/289 (100%)
Query: 1 MGLGLWIRTGVLMAFLTALLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYN 60
MGLGLWIRTGVLMAFLTALLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYN
Sbjct: 1 MGLGLWIRTGVLMAFLTALLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYN 60
Query: 61 ARIVSEEEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLH 120
ARIVSEEEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLH
Sbjct: 61 ARIVSEEEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLH 120
Query: 121 LLNRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSGS 180
LLNRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSGS
Sbjct: 121 LLNRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSGS 180
Query: 181 VIGLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAIRYRPL 240
VIGLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAIRYRPL
Sbjct: 181 VIGLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAIRYRPL 240
Query: 241 RRGNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRKIALEMGIVF 289
RRGNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRKIALEMGIVF
Sbjct: 241 RRGNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRKIALEMGIVF 289
>sp|O58997|HTPX_PYRHO PROBABLE PROTEASE HTPX HOMOLOG >gi|7441958|pir||C71070 probable
heat shock protein - Pyrococcus horikoshii
>gi|3257674|dbj|BAA30357.1| (AP000005) 292aa long
hypothetical heat shock protein [Pyrococcus horikoshii]
Length = 292
Score = 545 bits (1390), Expect = e-154
Identities = 269/289 (93%), Positives = 282/289 (97%)
Query: 1 MGLGLWIRTGVLMAFLTALLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYN 60
MGLGLWIRTG+LM LT +LVGIGYL+GG GGMIIAFT+ALFMNLISYWFSDSIVL+WYN
Sbjct: 4 MGLGLWIRTGILMTLLTVVLVGIGYLLGGTGGMIIAFTLALFMNLISYWFSDSIVLNWYN 63
Query: 61 ARIVSEEEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLH 120
ARIVSEEEAPELHYIVEKLARQAGIPKP+VAIVPTMVPNAFATGR P NAVVAVTEGLL
Sbjct: 64 ARIVSEEEAPELHYIVEKLARQAGIPKPRVAIVPTMVPNAFATGRSPRNAVVAVTEGLLQ 123
Query: 121 LLNRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSGS 180
LLN+DELEGVIAHEISHIKNRDTLIQT+AAVLAGAIMILVDFARWSLWFGAYDDERDSGS
Sbjct: 124 LLNKDELEGVIAHEISHIKNRDTLIQTIAAVLAGAIMILVDFARWSLWFGAYDDERDSGS 183
Query: 181 VIGLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAIRYRPL 240
VIGLILAI+LAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEA+RYRPL
Sbjct: 184 VIGLILAIILAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAVRYRPL 243
Query: 241 RRGNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRKIALEMGIVF 289
RRGNPATAHMFI+NPFRG+DFAELFSTHPPTEKRIERLRKIALEMGI+F
Sbjct: 244 RRGNPATAHMFIINPFRGIDFAELFSTHPPTEKRIERLRKIALEMGIIF 292
>sp|O67798|HTPX_AQUAE PROBABLE PROTEASE HTPX HOMOLOG >gi|7441961|pir||B70471 heat shock
protein X - Aquifex aeolicus >gi|2984218|gb|AAC07747.1|
(AE000766) heat shock protein X [Aquifex aeolicus]
Length = 302
Score = 308 bits (781), Expect = 5e-83
Identities = 159/273 (58%), Positives = 203/273 (74%), Gaps = 6/273 (2%)
Query: 19 LLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYNARIVSEEEAPELHYIVEK 78
LL+ IG +IGG GM+IA IA FMN +SYWFSD IVLS Y AR + EEAP LH IVE+
Sbjct: 27 LLMAIGGIIGGTAGMLIALIIAGFMNFMSYWFSDKIVLSMYGAREIPYEEAPWLHQIVEE 86
Query: 79 LARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDELEGVIAHEISHI 138
LAR+A +PKPK+ +VP PNAFATGRGPG+A VAVT G+L +L+++EL+GV+AHE++HI
Sbjct: 87 LARRANMPKPKIYLVPMEQPNAFATGRGPGHAAVAVTRGILEILDQEELKGVLAHELAHI 146
Query: 139 KNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAY--DDERDSG---SVIGLILAIVLAPL 193
KNRD L+ T+AA +AGAI L + A+W+L+FG ++E + G +IG IL I++ P+
Sbjct: 147 KNRDVLVATIAATIAGAIGFLANMAQWALFFGGLNRNEEEEGGGFAEMIGAILMIIIVPI 206
Query: 194 AATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAIRYRPLRRGNPATAHMFIV 253
AT++QLAISRSREY ADETGA+I G P ALA AL KIEE + P NP TAH+FI
Sbjct: 207 IATIVQLAISRSREYFADETGAKICGCPVALARALKKIEEYVMQVP-ANVNPGTAHLFIE 265
Query: 254 NPFRGVDFAELFSTHPPTEKRIERLRKIALEMG 286
NP +G EL STHP TEKRI+RL ++A +MG
Sbjct: 266 NPLKGGGIMELLSTHPSTEKRIQRLCELARKMG 298
>sp|Q59076|HTPX_METJA PROBABLE PROTEASE HTPX HOMOLOG >gi|2127959|pir||H64509 heat shock
protein X - Methanococcus jannaschii
>gi|1592249|gb|AAB99703.1| (U67608) heat shock protein
HtpX, possibly protease (htpX) [Methanococcus
jannaschii]
Length = 284
Score = 293 bits (742), Expect = 2e-78
Identities = 158/285 (55%), Positives = 207/285 (72%), Gaps = 11/285 (3%)
Query: 7 IRTGVLMAFLTALLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYNARIVSE 66
I+T +LMA L L+ I ++ +IA +AL N+I+Y+ SD +VL YNARI+ E
Sbjct: 5 IKTYLLMALLVGLIYAICMMLHIHP--LIAIILALIPNVIAYYMSDKLVLMSYNARILEE 62
Query: 67 EEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDE 126
E P LH +VE++AR+AG+PKPKVAIVPT PNAFATGR P NAVVAVTEG+L LL+ +E
Sbjct: 63 HEMPWLHQMVERVARKAGLPKPKVAIVPTETPNAFATGRNPENAVVAVTEGILKLLSPEE 122
Query: 127 LEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFG-----AYDDERDSGSV 181
LEGVI HEISHIK+RD LI T+ A LAGAI+++ A W L++G + ++E + +
Sbjct: 123 LEGVIGHEISHIKHRDILISTIVATLAGAIVMI---AEWMLYWGGIFFVSEEEESNPLEL 179
Query: 182 IGLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAIRYRPLR 241
IG IL ++LAP+AAT+IQ AISR RE+ ADE GA+++ P LA+AL K+E + PL
Sbjct: 180 IGTILLLILAPIAATIIQFAISRQREFYADEEGAKLT-HPLWLANALAKLERGVELYPLE 238
Query: 242 RGNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRKIALEMG 286
RGNPATAHMFI+NPFR A+LFSTHPPTE+RIERL ++ +G
Sbjct: 239 RGNPATAHMFIINPFRKDFIAKLFSTHPPTEERIERLLEMCKRIG 283
>emb|CAC08262.1| (AL392146) putative peptidase [Streptomyces coelicolor]
Length = 287
Score = 244 bits (616), Expect = 1e-63
Identities = 137/279 (49%), Positives = 184/279 (65%), Gaps = 6/279 (2%)
Query: 7 IRTGVLMAFLTALLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYNARIVSE 66
+RT VL+ L+AL++ IG G R G+++A +AL N +YW SD + L AR VSE
Sbjct: 8 LRTAVLLGGLSALIIVIGSFFG-RAGLVVAVLVALGTNAYAYWNSDKLALRAMRARPVSE 66
Query: 67 EEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDE 126
EAP L+ +V +L+ QA P P++ I PT PNAFATGR P NA V TEG++ LL+ E
Sbjct: 67 FEAPALYRMVRELSTQARQPMPRLYISPTDAPNAFATGRNPRNAAVCCTEGIMRLLDERE 126
Query: 127 LEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSGSVIGLIL 186
L GVI HE+SH+ NRD LI ++A LA IM LV+FA W + G +D+ D ++G++L
Sbjct: 127 LRGVIGHELSHVYNRDILISSVAGALASVIMFLVNFA-WLIPVGRSNDD-DGPGLLGMLL 184
Query: 187 AIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAIRYRPL--RRGN 244
++L PLAAT+IQLAISRSREY AD +GA+++G P ALA AL K+E + PL
Sbjct: 185 IMLLGPLAATVIQLAISRSREYEADASGAQLTGDPLALAGALRKLELGTKQLPLPPEPRL 244
Query: 245 PATAHMFIVNPFR-GVDFAELFSTHPPTEKRIERLRKIA 282
+HM I NPFR G +++FSTHPP +RI RL K+A
Sbjct: 245 ETASHMMIANPFRPGQGISKMFSTHPPMAERIARLEKMA 283
>sp|O06429|HTPX_MYCTU PROBABLE PROTEASE HTPX HOMOLOG >gi|7441963|pir||F70549 probable
heat shock protein X - Mycobacterium tuberculosis
(strain H37RV) >gi|3261784|emb|CAB08997.1| (Z95558) htpX
[Mycobacterium tuberculosis]
Length = 286
Score = 220 bits (554), Expect = 2e-56
Identities = 125/279 (44%), Positives = 173/279 (61%), Gaps = 7/279 (2%)
Query: 7 IRTGVLMAFLTALLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYNARIVSE 66
++T +L+ ++AL+V +G L G R +++A A+ MN+ Y+ SD + L +A+ VSE
Sbjct: 10 LKTFLLLVGMSALIVAVGALFG-RTALMLAALFAVGMNVYVYFNSDKLALRAMHAQPVSE 68
Query: 67 EEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDE 126
+AP ++ IV +LA A P P++ I T PNAFATGR P NA V T G+L +LN E
Sbjct: 69 LQAPAMYRIVRELATSAHQPMPRLYISDTAAPNAFATGRNPRNAAVCCTTGILRILNERE 128
Query: 127 LEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSGSVIGLIL 186
L V+ HE+SH+ NRD LI +A LA I L + A W+ FG RD+ + L+L
Sbjct: 129 LRAVLGHELSHVYNRDILISCVAGALAAVITALANMAMWAGMFGG---NRDNANPFALLL 185
Query: 187 AIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAIRYRPL--RRGN 244
+L P+AAT+I++A+SRSREY ADE+GA ++G P ALASAL KI ++ PL
Sbjct: 186 VALLGPIAATVIRMAVSRSREYQADESGAVLTGDPLALASALRKISGGVQAAPLPPEPQL 245
Query: 245 PATAHMFIVNPFR-GVDFAELFSTHPPTEKRIERLRKIA 282
+ AH+ I NPFR G LFSTHPP E RI RL +A
Sbjct: 246 ASQAHLMIANPFRAGERIGSLFSTHPPIEDRIRRLEAMA 284
>sp|O30795|HTPX_STRGC PROBABLE PROTEASE HTPX HOMOLOG >gi|11277180|pir||T48855 probable
heat shock protein HtpX [imported] - Streptococcus
gordonii >gi|2407215|gb|AAB70525.1| (AF017421) putative
heat shock protein HtpX [Streptococcus gordonii]
Length = 297
Score = 218 bits (549), Expect = 7e-56
Identities = 130/289 (44%), Positives = 177/289 (60%), Gaps = 18/289 (6%)
Query: 8 RTGVLMAFLTALLVGIGYLIG------GRGGMIIAFTIALFMNLISYWFSDSIVLSWYNA 61
RT L+ ALL IG G GG+IIAF I L + + S +V+S A
Sbjct: 12 RTWFLLVAFFALLALIGAAAGYLWMNSPLGGVIIAFIIGLIYAITMIFQSTEVVMSMNGA 71
Query: 62 RIVSEEEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHL 121
R VSE+EAPEL++IV+ +A A IP P+V IV PNAFATG P NA VA T GLL L
Sbjct: 72 RQVSEQEAPELYHIVQDMAMVAQIPMPRVYIVEDDSPNAFATGSNPENAAVAATTGLLRL 131
Query: 122 LNRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGA--YDDERDSG 179
+NR+ELEGVI HE+SHI+N D I T+A LA AI ++ A +W+G ++RD
Sbjct: 132 MNREELEGVIGHEVSHIRNYDIRISTIAVALASAITMISSVAGRMMWYGGGRRRNDRDDD 191
Query: 180 SVIGL------ILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEE 233
S +GL ++AI+LAPLAATL+QLAISR RE+LAD + ++ P + AL K++
Sbjct: 192 SGLGLLMLVFSLIAIILAPLAATLVQLAISRQREFLADASSVELTRNPQGMIRALQKLDN 251
Query: 234 AIRYRPLRRG-NPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRKI 281
+ P+ R + A+A ++I +P + +LF THPP +R+ERLRK+
Sbjct: 252 S---EPMHRHVDDASAALYISDPKKKGGLQKLFYTHPPISERVERLRKM 297
>emb|CAB58284.1| (AL121850) protease HtpX homolog (EC 3.4.24.-) [Streptomyces
coelicolor A3(2)] >gi|7799225|emb|CAB90849.1| (AL355740)
protease HtpX homologue (heat shock protein)
[Streptomyces coelicolor]
Length = 304
Score = 182 bits (458), Expect = 3e-45
Identities = 112/287 (39%), Positives = 164/287 (57%), Gaps = 6/287 (2%)
Query: 5 LWIRTGVLMAFLTALLVG-IGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYNARI 63
L +R GV + L L VG + LI ++ I + YWFSD I L R+
Sbjct: 11 LTVRMGVTLFLLGLLYVGFVAALIALLKSWVLVVVIVALVFGAQYWFSDRIALFAMRGRV 70
Query: 64 VSEEEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLN 123
V EE PELH +V++LA A +PKP VA+ +PNAFATGR P NAVV VT GLL L
Sbjct: 71 VEREEYPELHGVVDRLAAMADMPKPVVAVSEMEMPNAFATGRNPDNAVVCVTTGLLRRLE 130
Query: 124 RDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSGSVIG 183
ELEGV+AHE+SH+ ++D + T+A+ L ++V FA +S FG D+ ++ +V+
Sbjct: 131 PAELEGVLAHELSHVAHKDVAVITVASFLGVIAGLIVRFAFYSQLFGGRRDQ-NTLAVLA 189
Query: 184 LILAIVLAPLAATLIQL-AISRSREYLADETGARISGKPHALASALMKIEEAIRYRPLRR 242
+++ + A A + + + A+SR RE AD A ++G+P ALA+AL K+ I P +
Sbjct: 190 VVMGVSAAVYALSFLLIRALSRYRELAADRAAALLTGRPSALAAALTKVTGDIARIPTKD 249
Query: 243 GNPATA-HMFIVNPFRGVD--FAELFSTHPPTEKRIERLRKIALEMG 286
A A + F P G D F+THP E+R+++L +I+ E+G
Sbjct: 250 LRTAQAFNAFYFTPAFGSDPGLGRFFATHPSLEQRLDQLGRISTELG 296
>sp|O26669|HTPX_METTH PROBABLE PROTEASE HTPX HOMOLOG >gi|7428778|pir||C69175 heat shock
protein X - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2621646|gb|AAB85075.1| (AE000839)
heat shock protein X [Methanobacterium
thermoautotrophicum]
Length = 258
Score = 160 bits (401), Expect = 2e-38
Identities = 97/245 (39%), Positives = 145/245 (58%), Gaps = 13/245 (5%)
Query: 3 LGLWIRTGVLMAFLTALLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYNAR 62
L +++ T +L + A+L+ +G ++G GG + + + + Y S IV N
Sbjct: 17 LRMFLATVLLFGLIYAILMVVGSILG-LGGPLFYALLGFGVIFLQYLISPKIVELTMNVH 75
Query: 63 IVSEEEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLL 122
VSE EAP LH +V++LAR+AGIPKP V I +PNAFA GR + V VT G+L+LL
Sbjct: 76 YVSEAEAPRLHAMVDELARRAGIPKPMVGIAEIALPNAFAFGRTKADGRVCVTRGILNLL 135
Query: 123 NRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSGSVI 182
+ +EL V+ HEISHIK+ D ++ TL + A+ ++ + WS F + DDE +++
Sbjct: 136 DEEELRAVLGHEISHIKHSDMIVMTLVS----AVPLICYYIFWSTVF-SRDDE---ANLV 187
Query: 183 GLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAIRYRPLRR 242
G +A ++A LI L ISR+REY AD+ I G+PH LASAL K+ +R P+++
Sbjct: 188 G--IAALIAYFIGQLIVLFISRTREYYADQGSVEIGGQPHKLASALYKL--VLRLSPVQQ 243
Query: 243 GNPAT 247
G P T
Sbjct: 244 GRPET 248
>sp|Q9YD67|HTPX_AERPE PROBABLE PROTEASE HTPX HOMOLOG >gi|7521111|pir||F72703 probable
heat shock protein htpX APE1045 - Aeropyrum pernix
(strain K1) >gi|5104715|dbj|BAA80030.1| (AP000060) 366aa
long hypothetical heat shock protein htpX [Aeropyrum
pernix]
Length = 366
Score = 129 bits (322), Expect = 3e-29
Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 34/290 (11%)
Query: 27 IGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYNARIVSEEEAPELHYIV---EKLARQA 83
+ G G + +AL M L+ + FS I+ Y R E P +IV E+LAR++
Sbjct: 76 LSGTGVAFMLSLLALAMVLVQWLFSPYIINMVYRTR----EPLPGEEWIVAEVEQLARRS 131
Query: 84 GIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDELEGVIAHEISHIKNRDT 143
G+ PKV + +PNAFA G + VAVT GLL LL +DE+ V+AHE+ H+K+RD
Sbjct: 132 GLKPPKVVVSEMNMPNAFAYGSPIAGSYVAVTRGLLRLLPKDEVRAVLAHEVGHLKHRDV 191
Query: 144 LIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSG--SVIGLILAIVLAPLAATLIQLA 201
+ +++ A ++ W+ G ER +++ + A++ A + LI
Sbjct: 192 TVILALSLIPIAAFLIGRTLVWAGILGGGGGERRGNPMALVAVGAALLAAGMVFQLIVSH 251
Query: 202 ISRSREYLADETGARISGKPHALASALMKIEEAIRYRP----LRRGNPATAHMFIV---- 253
+R REY AD A ++G P +L AL +I A + P R N + +FIV
Sbjct: 252 FNRLREYYADAHSALVTGSPRSLQRALARIHAAYEHNPHLVEEARSNEMASMLFIVAPLT 311
Query: 254 ----NPFRGVDF-------------AELFSTHPPTEKRIERLRKIALEMG 286
+P VD+ ELFSTHPP KR+ L ++A +G
Sbjct: 312 SLTASPLVDVDYLVERLKEQETNPLVELFSTHPPVSKRLRFLDRLASRIG 361
>gb|AAG18751.1| (AE004980) heat shock protein; Hsp4 [Halobacterium sp. NRC-1]
Length = 289
Score = 129 bits (321), Expect = 4e-29
Identities = 102/293 (34%), Positives = 145/293 (48%), Gaps = 35/293 (11%)
Query: 11 VLMAFLTALLVGIGYLIGGRGGMI-IAFTIALFMNLISYWFSDSIVLSWYNARIVSEEEA 69
+L AF + + + G ++ IA ++ + + Y + L A + E+E
Sbjct: 7 ILFAFYSVAIAAAWFFFGQNQTILAIAIVGSVVLVGVQYKVGKWMALRSVGAEDMDEQEF 66
Query: 70 PELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDELEG 129
P +H VE L+R GI KP + + VPNAFA GR GN V V+ L+ +L +EL+G
Sbjct: 67 PRIHRRVESLSRDMGIKKPTLKVANMGVPNAFAVGR-KGNGTVVVSRELIDILEHEELDG 125
Query: 130 VIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSGSVIGLILAIV 189
V+AHE+SHI NRD + L +A + I+ A++ + F +D D LAIV
Sbjct: 126 VLAHELSHIANRDVVTMQLGQGIASIVGIV---AQYIVLFSGDNDLAD------FFLAIV 176
Query: 190 LAPLA---ATLIQLAISRSREYLADETGARISGKPHALASALMKI----EEAIRYRPLR- 241
+ L TL LAISR REY+AD R G LA AL KI E+A + + R
Sbjct: 177 VGNLVQFLVTLFVLAISRYREYVADADARRAIGTGEPLARALEKISQGNEQAAQQQRQRT 236
Query: 242 -RG--------------NPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLR 279
RG + + + I +P V +L STHPPTEKRI+RLR
Sbjct: 237 SRGRGRRQRGQRNDDGLDQQVSALCISSPDTSV-LQKLVSTHPPTEKRIQRLR 288
>pir||D83293 heat shock protein HtpX PA2830 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9948915|gb|AAG06218.1|AE004709_11
(AE004709) heat shock protein HtpX [Pseudomonas
aeruginosa]
Length = 291
Score = 117 bits (290), Expect = 2e-25
Identities = 92/287 (32%), Positives = 148/287 (51%), Gaps = 26/287 (9%)
Query: 11 VLMAFLTALLVGIGYLIGGRGGMIIAFTIALFM--NLISYWFSDSIVLSWYNARIVSEEE 68
+++A +T L+G+ G G ++ F +L+S + S + ++S+
Sbjct: 15 LVIASITLKLLGVDRFTGQNYGSLLVFCAVFGFAGSLVSLFISKWMAKMSTGTEVISQPR 74
Query: 69 APELHYI---VEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRD 125
++ VE+L+R+AGI P+V I P NAFATG +A+VAV++GLL + D
Sbjct: 75 TRHEQWLLQTVEELSREAGIKMPEVGIFPAYEANAFATGWNKNDALVAVSQGLLERFSPD 134
Query: 126 ELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDD----ERDSGSV 181
E++ V+AHEI H+ N D + TLA + ++ FAR FG + D + + G
Sbjct: 135 EVKAVLAHEIGHVANGDMV--TLALIQGVVNTFVMFFAR---IFGNFVDKAILKNEDGPG 189
Query: 182 IGLILAIVLAPLA----ATLIQLAISRSREYLADETGARISGKPHALASALMKI--EEAI 235
IG +A + A L A++I + SR RE+ AD GA ++G A+ +AL ++ E+ +
Sbjct: 190 IGYFVATIFAELVLGILASIIVMWFSRRREFRADAAGAHLAG-TGAMIAALQRLRSEQGV 248
Query: 236 RYRPLRRGNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRKIA 282
P++ P T + F +N A L +HPP E RIE LR A
Sbjct: 249 ---PVQM--PDTLNAFGINGGLKHGLAGLLMSHPPLEDRIEALRASA 290
>emb|CAC11990.1| (AL445065) heat shock protein (htpx) related protein [Thermoplasma
acidophilum]
Length = 317
Score = 114 bits (283), Expect = 1e-24
Identities = 92/310 (29%), Positives = 149/310 (47%), Gaps = 35/310 (11%)
Query: 1 MGLGLWIRTGVLMAFLTALLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYN 60
MG+ ++ + + A+L IG IG +++ I + M+++ + F ++ + Y
Sbjct: 15 MGIAIF---AIGFGIIYAILYYIGLNIGAIALLMVLLPIFIIMDIVQWLFGPYMIGAVYR 71
Query: 61 ARIV--SEEEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGL 118
+ +E E L IV ++AR I P+V I +PNAFA G +AVT GL
Sbjct: 72 THKLQPTEPEYNMLTSIVSEVARNNNIRMPEVYIAEVDMPNAFAYGSPIAGRRIAVTRGL 131
Query: 119 LHLLNRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDS 178
L +L DE++ VI HE+ H+++RD ++ L A+ G I L+ + ++L F + R++
Sbjct: 132 LRILEPDEIKAVIGHEMGHLRHRD--VEMLLAI--GLIPTLIFYFGYTLLFSG-ERGRNA 186
Query: 179 GSVIGLILAIVLAPLAATLIQLAISRSREYLADETGA-RISGKPHALASALMKIEEAI-- 235
G ++ L + + A + LA +R RE AD A + G L +AL KI A
Sbjct: 187 GGIVLLAIIAMAASFLFRFLILAFNRMRESYADVNSALTVDGGAEKLQTALAKIVAATGR 246
Query: 236 --RYRPLRRGNPA---TAHMFIVNPFRGVD-----------------FAELFSTHPPTEK 273
RY RR P+ T +F NP + + FA+ FS HP K
Sbjct: 247 TGRYTRRRRNTPSSSVTEMLFFSNPNQSANEDYRKLLEEWKTAKVSLFADFFSDHPHPAK 306
Query: 274 RIERLRKIAL 283
RI+RL K+ +
Sbjct: 307 RIQRLEKLKM 316
>sp|P44840|HTPX_HAEIN PROBABLE PROTEASE HTPX >gi|1074178|pir||H64088 heat shock protein
htpX - Haemophilus influenzae (strain Rd KW20)
>gi|1573723|gb|AAC22378.1| (U32755) heat shock protein
(htpX) [Haemophilus influenzae Rd]
Length = 283
Score = 114 bits (282), Expect = 1e-24
Identities = 88/294 (29%), Positives = 151/294 (50%), Gaps = 25/294 (8%)
Query: 1 MGLGLWIRTGVLMAFLTALLVGIGYLIGGRGG--MIIAFTIALFMNLISYWFSDSIVLSW 58
M + L++ T + + + +++ + + G G +I+A +LIS + S ++ L
Sbjct: 2 MRILLFLATNMAVMLVLGIILSVTGIAGNSTGGILIMALLFGFAGSLISLFLSKTMALRS 61
Query: 59 YNARIVSEEEAPELHYIVEKLARQA---GIPKPKVAIVPTMVPNAFATGRGPGNAVVAVT 115
+ ++++ ++++ ++RQA GIP P VAI + NAFATG N++VAV+
Sbjct: 62 VDGEVITQPRNQTERWLIDTVSRQAQKAGIPMPDVAIYHSPDVNAFATGATKSNSLVAVS 121
Query: 116 EGLLHLLNRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDE 175
GLL+ + E E V+AHEISHI N D + A+L G + V F +
Sbjct: 122 TGLLNNMTEAEAEAVLAHEISHISNGDMVTM---ALLQGVLNTFVIFLSRVIATAVASSR 178
Query: 176 RDSG-----SVIGLILAIVLAPL---AATLIQLAISRSREYLADETGARISGKPHALASA 227
++G S I ++++VL L A++I + SR RE+ AD A + GK + A
Sbjct: 179 NNNGEETRSSGIYFLVSMVLEMLFGVLASIIAMWFSRYREFRADAGSASLVGK-EKMIMA 237
Query: 228 LMKIEEAIRYRPLRRGNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRKI 281
L ++++ + L + + F++N R +ELF +HPP EKRIE LR +
Sbjct: 238 LQRLQQLHEPQNLE----GSLNAFMINGKR----SELFMSHPPLEKRIEALRNL 283
>sp|P23894|HTPX_ECOLI PROBABLE PROTEASE HTPX (HEAT SHOCK PROTEIN HTPX)
>gi|280065|pir||A43659 heat shock protein htpX -
Escherichia coli >gi|146412|gb|AAA62779.1| (M58470) htpX
[Escherichia coli] >gi|1736470|dbj|BAA15637.1| (D90826)
Heat shock protein HtpX [Escherichia coli]
>gi|1788133|gb|AAC74899.1| (AE000277) heat shock
protein, integral membrane protein [Escherichia coli
K12]
Length = 293
Score = 112 bits (278), Expect = 4e-24
Identities = 89/294 (30%), Positives = 141/294 (47%), Gaps = 23/294 (7%)
Query: 1 MGLGLWIRTGVLMAFLTALLVGIGYLIGG--RGGMIIAFTIALFMNLISYWFSDSIVLSW 58
M + L++ T + + + L++ + + +G MI+A + +S S + L
Sbjct: 2 MRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGFGGSFVSLLMSKWMALRS 61
Query: 59 YNARIVSEEEAPELHYIVEKLA---RQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVT 115
++ + ++V +A RQAGI P+VAI NAFATG ++VAV+
Sbjct: 62 VGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAPDINAFATGARRDASLVAVS 121
Query: 116 EGLLHLLNRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDE 175
GLL ++ DE E VIAHEISHI N D + TL + +I + L G
Sbjct: 122 TGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVNTFVIFISRILAQLAAGFMGGN 181
Query: 176 RDSGS----------VIGLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALA 225
RD G + +L +V + A++I + SR RE+ AD A++ G+ +A
Sbjct: 182 RDEGEESNGNPLIYFAVATVLELVFG-ILASIITMWFSRHREFHADAGSAKLVGREKMIA 240
Query: 226 SALMKIEEAIRYRPLRRGNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLR 279
AL +++ + Y P AT+ M + + +ELF THPP +KRIE LR
Sbjct: 241 -ALQRLKTS--YEP----QEATSMMALCINGKSKSLSELFMTHPPLDKRIEALR 287
>sp|Q9ZKS4|HTPX_HELPJ PROBABLE PROTEASE HTPX HOMOLOG >gi|7441959|pir||D71878 stress
protein - Helicobacter pylori (strain J99)
>gi|4155439|gb|AAD06444.1| (AE001516) stress protein
[Helicobacter pylori J99]
Length = 310
Score = 109 bits (271), Expect = 3e-23
Identities = 77/258 (29%), Positives = 139/258 (53%), Gaps = 22/258 (8%)
Query: 34 IIAFTIALFMNLISYWFSDSIVLSWYNARIVSEEEA-----PELHYIVEKLARQAGIP-K 87
I+ F +A + L+ SI+LS +++ + ++H ++ +L +A + +
Sbjct: 61 IVMFVVAFVIILVCIQNFSSIMLSGDEYKLIDPSKVLSSKENQIHRLLLELLEEAKLHFE 120
Query: 88 PKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDELEGVIAHEISHIKNRDTLIQT 147
PK+ I+ NAFA+G N+++A+T L+ L+RDEL+ VIAHE+SHI++ D +
Sbjct: 121 PKLYIINAPYMNAFASGWDESNSLIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTM 180
Query: 148 LAAVLAGAIMILVDFARWSLWFGAYDDERDSGSVIGLILAI--VLAPLAATLIQLAISRS 205
+L+ IM+LV A +S++F + + ++ +IL + ++ P L+Q+ +SR+
Sbjct: 181 CVGILSN-IMLLV--ANFSVYFFMGNRKNSGANLARMILWVLQIILPFLTLLLQMYLSRT 237
Query: 206 REYLADETGARISGKPHALASALMKIEEAIR---YRPLRRGNPATAHMFIVNPFRGVDFA 262
REY+AD A + + AL KI Y+ + + + +A ++ N A
Sbjct: 238 REYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNSTRSA-AYLFN-------A 289
Query: 263 ELFSTHPPTEKRIERLRK 280
E+FSTHP + RI+ LRK
Sbjct: 290 EMFSTHPSIKNRIQSLRK 307
>pir||G64635 heat shock protein - Helicobacter pylori (strain 26695)
>gi|2314064|gb|AAD07972.1| (AE000602) heat shock protein
(htpX) [Helicobacter pylori 26695]
Length = 326
Score = 108 bits (268), Expect = 7e-23
Identities = 76/258 (29%), Positives = 139/258 (53%), Gaps = 22/258 (8%)
Query: 34 IIAFTIALFMNLISYWFSDSIVLSWYNARIVSEEEA-----PELHYIVEKLARQAGIP-K 87
+I F +A + ++ SI+LS +++ + ++H ++ +L +A + +
Sbjct: 77 MIMFLVAFVVIVVCIQNFSSIMLSGDGYKLIDTSKVLSSKENQIHRLLLELLEEANLHFE 136
Query: 88 PKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDELEGVIAHEISHIKNRDTLIQT 147
PK+ I+ NAFA+G N+++A+T L+ L+RDEL+ VIAHE+SHI++ D +
Sbjct: 137 PKLYIINAPYMNAFASGWNESNSLIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTM 196
Query: 148 LAAVLAGAIMILVDFARWSLWFGAYDDERDSGSVIGLILAI--VLAPLAATLIQLAISRS 205
+L+ IM+LV A +S++F + + ++ +IL + ++ P L+Q+ +SR+
Sbjct: 197 CVGILSN-IMLLV--ANFSVYFFMGNRKNSGANLARMILWVLQIILPFLTLLLQMYLSRT 253
Query: 206 REYLADETGARISGKPHALASALMKIEEAIR---YRPLRRGNPATAHMFIVNPFRGVDFA 262
REY+AD A + + AL KI Y+ + + + +A ++ N A
Sbjct: 254 REYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNSTRSA-AYLFN-------A 305
Query: 263 ELFSTHPPTEKRIERLRK 280
E+FSTHP + RI+ LRK
Sbjct: 306 EMFSTHPSIKNRIQSLRK 323
>sp|O25582|HTPX_HELPY PROBABLE PROTEASE HTPX HOMOLOG
Length = 310
Score = 108 bits (268), Expect = 7e-23
Identities = 76/258 (29%), Positives = 139/258 (53%), Gaps = 22/258 (8%)
Query: 34 IIAFTIALFMNLISYWFSDSIVLSWYNARIVSEEEA-----PELHYIVEKLARQAGIP-K 87
+I F +A + ++ SI+LS +++ + ++H ++ +L +A + +
Sbjct: 61 MIMFLVAFVVIVVCIQNFSSIMLSGDGYKLIDTSKVLSSKENQIHRLLLELLEEANLHFE 120
Query: 88 PKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDELEGVIAHEISHIKNRDTLIQT 147
PK+ I+ NAFA+G N+++A+T L+ L+RDEL+ VIAHE+SHI++ D +
Sbjct: 121 PKLYIINAPYMNAFASGWNESNSLIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTM 180
Query: 148 LAAVLAGAIMILVDFARWSLWFGAYDDERDSGSVIGLILAI--VLAPLAATLIQLAISRS 205
+L+ IM+LV A +S++F + + ++ +IL + ++ P L+Q+ +SR+
Sbjct: 181 CVGILSN-IMLLV--ANFSVYFFMGNRKNSGANLARMILWVLQIILPFLTLLLQMYLSRT 237
Query: 206 REYLADETGARISGKPHALASALMKIEEAIR---YRPLRRGNPATAHMFIVNPFRGVDFA 262
REY+AD A + + AL KI Y+ + + + +A ++ N A
Sbjct: 238 REYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNSTRSA-AYLFN-------A 289
Query: 263 ELFSTHPPTEKRIERLRK 280
E+FSTHP + RI+ LRK
Sbjct: 290 EMFSTHPSIKNRIQSLRK 307
>pir||E82239 heat shock protein HtpX VC1117 [imported] - Vibrio cholerae (group
O1 strain N16961) >gi|9655588|gb|AAF94276.1| (AE004192)
heat shock protein HtpX [Vibrio cholerae]
Length = 287
Score = 106 bits (262), Expect = 3e-22
Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 25/292 (8%)
Query: 5 LWIRTGVLMAFLTALLVGIGYLIGGR------GGMIIAFTIALFMNLISYWFSDSIVLSW 58
L++ T + + + ++++ I Y + G G +++A IS S S+ L
Sbjct: 6 LFLATNLAVVLVLSVVLNIVYAVTGMQPGSLSGLLVMAAVFGFGGAFISLLMSKSMALRS 65
Query: 59 YNARIVSEEEAPELHYIVEKLARQA---GIPKPKVAIVPTMVPNAFATGRGPGNAVVAVT 115
++ H+++E + RQA GI P VAI NAFATG +++VAV+
Sbjct: 66 VGGVVIDTPRNEMEHWLLETVRRQANQAGIGMPTVAIYDAPDMNAFATGAKRDDSLVAVS 125
Query: 116 EGLLHLLNRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDE 175
GLLH + RDE E V+AHE+SHI N D + TL + +I + ++ + D E
Sbjct: 126 TGLLHNMTRDEAEAVLAHEVSHIANGDMVTMTLMQGVVNTFVIFLSRFIANI-VASRDSE 184
Query: 176 RDSGS------VIGLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALM 229
GS + ++L +V L A+ I + SR RE+ AD A++ GK H + +AL
Sbjct: 185 EGEGSNMMVYFGVSMVLELVFGFL-ASFITMWYSRHREFHADAGAAQLVGK-HKMIAALE 242
Query: 230 KIEEAIRYRPLRRGNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRKI 281
+++ + + + M +EL THPP EKRI LR +
Sbjct: 243 RLK-------MGQESHLEGSMMAFGITGKRSLSELMMTHPPLEKRIAALRNM 287
>gi|11497851 heat shock protein (htpX) [Archaeoglobus fulgidus]
>gi|6016276|sp|O30004|HTPX_ARCFU PROBABLE PROTEASE HTPX
HOMOLOG >gi|7441960|pir||C69279 heat shock protein
(htpX) homolog - Archaeoglobus fulgidus
>gi|2650407|gb|AAB90998.1| (AE001090) heat shock protein
(htpX) [Archaeoglobus fulgidus]
Length = 335
Score = 106 bits (261), Expect = 4e-22
Identities = 89/296 (30%), Positives = 132/296 (44%), Gaps = 36/296 (12%)
Query: 11 VLMAFLTALLVGIGYLIGGRGGMIIAF----TIALFMNLISYWFSDSIVLSWYNARIVSE 66
+L + A+ I YLI G+ I+F L +NL+ Y S I+ Y A
Sbjct: 48 LLAGMILAISAAIIYLILAYAGVYISFYGLIIFLLIINLLMYLLSPYIINLSYGA----- 102
Query: 67 EEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDE 126
+ L +V +AR+ + PK A+V PNAFA G VAV+E L+ +L+++E
Sbjct: 103 QRDERLQMVVNSVARRLNVKPPK-AVVVRSPPNAFAYGNFLTGKFVAVSESLMRMLSQEE 161
Query: 127 LEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSGSVIGLIL 186
LE VI HEI H K+RD + L +L I L ++L + D+R + + +
Sbjct: 162 LEAVIGHEIGHHKHRDNAVMLLFGLLPSVIFYL----GYALLHSSMRDDRRGAQLAAIGI 217
Query: 187 AIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAI-RY----RPLR 241
A V+ ++ LA SR REY AD G R + K A+ +L KI RY P++
Sbjct: 218 AAVIVSFIVQILVLAFSRLREYYADFEGVRATNK-DAMQRSLAKIHLFYHRYPDYLAPIQ 276
Query: 242 RGNPATAHMF-----IVNPFRGVD-----------FAELFSTHPPTEKRIERLRKI 281
T ++ + P D E STHPP KR+ + I
Sbjct: 277 DSKFRTLFIYAFTNAVAEPITRADIEALKNMKVSPIQEFLSTHPPLPKRLRFIESI 332
>pir||E81154 heat shock protein HtpX NMB0822 [imported] - Neisseria meningitidis
(group B strain MD58) >gi|7226057|gb|AAF41235.1|
(AE002435) heat shock protein HtpX [Neisseria
meningitidis MC58]
Length = 347
Score = 102 bits (253), Expect = 4e-21
Identities = 85/287 (29%), Positives = 142/287 (48%), Gaps = 23/287 (8%)
Query: 5 LWIRTGV-LMAFLTALLVGIGYLIGGRGGMIIAFT--IALFMNLISYWFSDSIVLSWYNA 61
L++ T + ++ + +L +G G G ++A++ + ++IS S I A
Sbjct: 74 LFLATNIAVLVVINIVLAVLGINSRGGTGSLLAYSAVVGFTGSIISLLMSKFIAKQSVGA 133
Query: 62 RIV----SEEEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEG 117
++ +EEEA L+ VE ARQ + P+VAI + PNAFATG ++++AV+ G
Sbjct: 134 EVIDTPRTEEEAWLLN-TVEAQARQWNLKTPEVAIYHSPEPNAFATGASRNSSLIAVSTG 192
Query: 118 LLHLLNRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERD 177
LL + RDE+E V+AHE++H+ N D + TL + ++ + +L D +
Sbjct: 193 LLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVVNTFVVFLSRIIANLIARNNDGSQS 252
Query: 178 SGS--VIGLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAI 235
G+ ++ ++ I+ L A+LI + SR REY AD A++ G P + SAL ++
Sbjct: 253 QGTYFLVSMVFQILFGFL-ASLIVMWFSRQREYRADAGAAKLVGAP-KMISALQRL---- 306
Query: 236 RYRPLRRGNPA-TAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRKI 281
+GNP G L STHP + RI RL+ +
Sbjct: 307 ------KGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARLKSL 347
>pir||E81951 probable membrane-bound zinc metallopeptidase (EC 3.4.24.-) NMA1031
[imported] - Neisseria meningitidis (group A strain
Z2491) >gi|7379733|emb|CAB84300.1| (AL162754) putative
membrane-bound zinc metallopeptidase [Neisseria
meningitidis Z2491]
Length = 279
Score = 102 bits (253), Expect = 4e-21
Identities = 85/287 (29%), Positives = 142/287 (48%), Gaps = 23/287 (8%)
Query: 5 LWIRTGV-LMAFLTALLVGIGYLIGGRGGMIIAFT--IALFMNLISYWFSDSIVLSWYNA 61
L++ T + ++ + +L +G G G ++A++ + ++IS S I A
Sbjct: 6 LFLATNIAVLVVINIVLAVLGINSQGGTGSLLAYSAVVGFTGSIISLLMSKFIAKQSVGA 65
Query: 62 RIV----SEEEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEG 117
++ +EEEA L+ VE ARQ + P+VAI + PNAFATG ++++AV+ G
Sbjct: 66 EVIDTPRTEEEAWLLN-TVEAQARQWNLKTPEVAIYHSPEPNAFATGASRNSSLIAVSTG 124
Query: 118 LLHLLNRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERD 177
LL + RDE+E V+AHE++H+ N D + TL + ++ + +L D +
Sbjct: 125 LLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVVNTFVVFLSRIIANLIARNNDGSQS 184
Query: 178 SGS--VIGLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAI 235
G+ ++ ++ I+ L A+LI + SR REY AD A++ G P + SAL ++
Sbjct: 185 QGTYFLVSMVFQILFGFL-ASLIVMWFSRQREYRADAGAAKLVGAP-KMISALQRL---- 238
Query: 236 RYRPLRRGNPA-TAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRKI 281
+GNP G L STHP + RI RL+ +
Sbjct: 239 ------KGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARLKSL 279
>pir||B82534 heat shock protein XF2625 [imported] - Xylella fastidiosa (strain
9a5c) >gi|9107852|gb|AAF85422.1|AE004069_3 (AE004069)
heat shock protein [Xylella fastidiosa]
Length = 289
Score = 101 bits (248), Expect = 1e-20
Identities = 77/260 (29%), Positives = 126/260 (47%), Gaps = 20/260 (7%)
Query: 31 GGMIIAFTIALFMNLISYWFSDSIVLSWYNARIVSEEEAPELHYIVEKLARQA---GIPK 87
G +++A + IS S +I A ++ + ++++ ++RQA GI +
Sbjct: 35 GLLVMALIFGFAGSFISLLMSKAIAKRTTGAYVIDQPRNLSERWLLDTVSRQAEIVGIGR 94
Query: 88 PKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDELEGVIAHEISHIKNRDT---- 143
P++AI + NAFATG NA+VAV+ GLL +++DE+E V+ HEI+H+ N D
Sbjct: 95 PEIAIYEGVEINAFATGADRNNALVAVSTGLLQNMSQDEVEAVLGHEIAHVANGDMVTMA 154
Query: 144 ----LIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSGSVIGLILAIVLAPLAATLIQ 199
++ T VLA + +D SL G R +++ +L L AT+I
Sbjct: 155 LLQGVLNTFVIVLARVVGGFID----SLLSGNRGGARGVAYYAIVLVLELLFGLFATMIT 210
Query: 200 LAISRSREYLADETGARISGKPHALASALMKIEEAIRYRPLRRGNPATAHMFIVNPFRGV 259
+ SR RE+ ADE GA ++G+ +A+ E + + P F + G
Sbjct: 211 MWFSRRREFRADEGGAYLAGRNKMIAAL-----ERLGINHGQSTLPTQVQAFGIYGGIGE 265
Query: 260 DFAELFSTHPPTEKRIERLR 279
+LF +HPP +RI LR
Sbjct: 266 GLRKLFLSHPPLSERIAALR 285
>emb|CAA71000.1| (Y09872) small heat shock protein [Plasmodium vivax]
Length = 482
Score = 97.5 bits (239), Expect = 2e-19
Identities = 73/223 (32%), Positives = 114/223 (50%), Gaps = 19/223 (8%)
Query: 8 RTGVLMAFLTALLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYNARIVSEE 67
+T +L+ L + G L+ G G+ +A LI + ++ L Y AR + +
Sbjct: 32 QTALLVLTLVGIAAAAGSLLFGEIGLWLALATCALTLLIEPVAASAMTLRLYGARPLRPD 91
Query: 68 EAPELHYIVEKLARQAGIPK-PKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDE 126
EAP + ++ +LAR+AG+P P VP+ + NAFATG A +A+T+GLL L+ E
Sbjct: 92 EAPAIWSLLRRLARRAGLPNTPVPYYVPSDIVNAFATG-SRRLASIALTDGLLRSLSMRE 150
Query: 127 LEGVIAHEISHIKNRDTLIQTLA---------AVLAGAIMILVDFARWSLWFGAYDDERD 177
L+ V+AHE++HI D + LA L G + +L+ +L GA +
Sbjct: 151 LQAVLAHEVAHIAQEDLRVMGLADSISRLTNLLALLGQVALLISMP--ALLVGAAEI--- 205
Query: 178 SGSVIGLILAIVLAPLAATLIQLAISRSREYLADETGARISGK 220
+ IGL+L + +P A L QL +SR RE+ AD R G+
Sbjct: 206 --NWIGLLL-LAASPQLALLAQLGLSRVREFDADRMADRADGR 245
>sp|O31657|HTPX_BACSU PROBABLE PROTEASE HTPX HOMOLOG >gi|7428777|pir||G69862 heat-shock
protein homolog ykrL - Bacillus subtilis
>gi|2633720|emb|CAB13222.1| (Z99111) similar to
heat-shock protein [Bacillus subtilis]
Length = 298
Score = 97.1 bits (238), Expect = 2e-19
Identities = 78/289 (26%), Positives = 143/289 (48%), Gaps = 33/289 (11%)
Query: 10 GVLMAFLTALLVGIGYLIGGRGG----------MIIAFTIALFMNLISYWFSDSIVLSWY 59
G++++ L+++ G+G GG +++ F + IS W + +++
Sbjct: 20 GIVLSVLSSV-TGVGTYFTADGGIDPMALLVFSLVVGFVGSFTSLAISRWMAKTMM---- 74
Query: 60 NARIVSEE------EAPELHYIVEKLARQAGIPK-PKVAIVPTMVPNAFATGRGPGNAVV 112
R+++ + E +L V +L+R AG+ K P+V I + NAFATG ++V
Sbjct: 75 GVRVLNPKKHSLSYEEQQLVDRVHRLSRSAGLTKMPEVGIYRSPEVNAFATGPSKRRSLV 134
Query: 113 AVTEGLLHLLNRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAY 172
AV+ GLL ++ +EGV+AHE++HI N D + TL + ++ + +R + W +
Sbjct: 135 AVSSGLLEQMDDAAVEGVLAHEVAHITNGDMVTMTLLQGIVNTFVVFL--SRIAAWIASR 192
Query: 173 DDERDSGSV---IGLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALM 229
+ D + I +I+ ++ + +L+ A SR RE+ AD GA ++GK + + +
Sbjct: 193 FVKEDLAPIVHFIAMIIFQIVFSILGSLVVFAYSRHREFHADRGGADLAGKDKMIHA--L 250
Query: 230 KIEEAIRYRPLRRGNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERL 278
+ ++ R L A + I G + LFSTHP ++RI RL
Sbjct: 251 RTLKSYSSRILEDDQTAVQTLKI----NGKKRSSLFSTHPDLDERIRRL 295
>dbj|BAB06421.1| (AP001516) heat-shock protein [Bacillus halodurans]
Length = 304
Score = 94.4 bits (231), Expect = 1e-18
Identities = 83/279 (29%), Positives = 132/279 (46%), Gaps = 37/279 (13%)
Query: 21 VGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYNARIVSEEE--APELHYIVEK 78
+GI Y +++ FT A +S W + ++ N +++ ++VEK
Sbjct: 43 LGIDYASLMVFSLLVGFTGAFISLAMSRWMAKKMM----NVKVLDPNGPLTERERFVVEK 98
Query: 79 ---LARQAGIPK-PKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDELEGVIAHE 134
L+R AG+ P+V I + NAFATG ++VAV+ GLL ++ D +EGVIAHE
Sbjct: 99 VHRLSRAAGLMHMPEVGIYQSAEVNAFATGPSKKRSLVAVSSGLLDAMDDDAVEGVIAHE 158
Query: 135 ISHIKNRDTLIQTLAAVLAG---------AIMILVDFAR----WSLWFGAYDDERDSGSV 181
++HI N D + TL + A +I+ F R W + F A
Sbjct: 159 VAHISNGDMVTMTLLQGVVNTFVVFLSRVAAIIVSRFVRSELQWIVQFAA---------- 208
Query: 182 IGLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAIRYRPLR 241
+I+ +L + +++ A SR REY AD GA ++G+ +A AL ++ + L
Sbjct: 209 --IIVFQILFSILGSIVVSAFSRYREYHADRGGADLAGR-DKMAHALRSLKAYLDRTKLN 265
Query: 242 RGNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRK 280
G +A + RG +LFSTHP + RI RL +
Sbjct: 266 DGTDDSAVQTMKISGRG-GVMKLFSTHPDLDDRIARLEQ 303
>gb|AAK43325.1| Heat shock protein (htpX-2) [Sulfolobus solfataricus]
Length = 325
Score = 89.7 bits (219), Expect = 4e-17
Identities = 86/308 (27%), Positives = 137/308 (43%), Gaps = 42/308 (13%)
Query: 12 LMAFLTALLVGIGYLIGGRGG--MIIAFTIALFMNLISYWFSDSIVLSWYNARIVSEEEA 69
L+ F AL V Y G + G +I++ I +F I W +++W +
Sbjct: 21 LLGFALALAVA-DYAFGAQFGVGLILSILIFIFFLNIIQWLFGPYMINWAYRTVEVTPTD 79
Query: 70 PE---LHYIVEKLARQAGIPK-PKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRD 125
P L+ V ++A+ G + PKV I PNAFA G +A T +L LLNRD
Sbjct: 80 PVYGWLYSTVAEVAKYNGFREVPKVYIADVPFPNAFAYGSPIAGKRIAFTLPILKLLNRD 139
Query: 126 ELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAY-----DDERDSGS 180
E+ V HE+ H+K+RD ++ L AV G I L+ + W L++G + ++G
Sbjct: 140 EIMAVAGHELGHLKHRD--VELLMAV--GLIPALIYYLGWWLFWGGLFSGGGNGRGNNGG 195
Query: 181 VIGLILAIVLA-PLAATLIQLAISRSREYLADETGA-RISGKPHALASALMKI------E 232
++ L+ I++A L+ L+++R RE AD A + G L AL K+ E
Sbjct: 196 LVFLLGIIMMAVSFVFQLLVLSLNRMREAYADVNSALTVPGGKENLQLALAKLTLSMDPE 255
Query: 233 EAIRYRPLRRGNPATAHMFIVNPFRGVD------------------FAELFSTHPPTEKR 274
R++ N + +F N V +A++F HP KR
Sbjct: 256 ALERFKKKSTTNQMASMLFFTNAIEEVPTWNAKELVEIWKTTKVPWYADIFMDHPHPAKR 315
Query: 275 IERLRKIA 282
I+ L K++
Sbjct: 316 IQLLDKVS 323
>sp|P57406|HTPX_BUCAI PROBABLE PROTEASE HTPX HOMOLOG >gi|10038995|dbj|BAB13029.1|
(AP001119) heat shock protein htpX [Buchnera sp. APS]
Length = 292
Score = 88.5 bits (216), Expect = 8e-17
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 26/280 (9%)
Query: 12 LMAFLTALLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYNARIVSEEEAPE 71
L+ FLT + Y G +I++ +++S S I L N I++
Sbjct: 20 LILFLTGIQSNTIY-----GLLIMSGLFGFSGSILSLILSKWIALRSVNGEIITHPRNEV 74
Query: 72 LHYIVEKLARQA---GIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDELE 128
+++ + +Q+ GI P++A+ NAFATG +A++AV+ GLL + E E
Sbjct: 75 ESWLINTVRQQSIQKGIIMPQIAVYHATDINAFATGARRNSALIAVSTGLLENMTHHEAE 134
Query: 129 GVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSGS-------- 180
VIAHEISHI N D + TL + +I + + R+ +
Sbjct: 135 AVIAHEISHIANGDMITMTLVQGVVNTFVIFISRFLSQIISNVMSSNRNENNTEEKNSFV 194
Query: 181 --VIGLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKIEEAIRYR 238
++ L ++ + A++I + SR RE+ AD + A++ G+ +A AL +++ + +
Sbjct: 195 YFLVSTFLELIFG-ILASIITMWFSRHREFYADASSAKMVGREKMIA-ALNRLKTS--HE 250
Query: 239 PLRRGNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERL 278
P + F +N + F +LF++HP E RIE L
Sbjct: 251 PQESDSMIA---FCING-KSKSFLKLFASHPSLENRIEAL 286
>gb|AAK42047.1| Heat shock protein (htpX-1) [Sulfolobus solfataricus]
Length = 311
Score = 87.4 bits (213), Expect = 2e-16
Identities = 85/308 (27%), Positives = 144/308 (46%), Gaps = 42/308 (13%)
Query: 11 VLMAFLTALLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYNARIVSE---- 66
V ++++++ +G I G I+ IA +++ ++ ++V+ W I+S
Sbjct: 3 VRQRLISSMVISLGLTIISEG--IVLIGIASLLHISLFFIFPALVIFWLFQWIISPYVVG 60
Query: 67 ----EEAPE------LHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTE 116
E +P L+ +V ++A ++ I P+V ++ PNAFA G G V +T
Sbjct: 61 RGGYEVSPNDPQYGWLYNLVRRIAEESKIKPPRVFVIDAPYPNAFAYGNRLGGMRVGITL 120
Query: 117 GLLHLLNRDELEGVIAHEISHIKNRDT----LIQTLAAVLAGAIMILVDFARWSLWFGAY 172
LL++L+ DEL VIAHE+ HIK+RD I + VL +L++F +L+ A
Sbjct: 121 PLLNILDVDELTAVIAHEVGHIKHRDVEIGMTIGLIPTVLGYISTLLMNFGYLALFLAAD 180
Query: 173 DDE---RDSGSVIGLILAIVLAPLAATLIQLAISRSREYLADETGARISGK-PHALASAL 228
+ E + IG ++ +V L + L +R RE AD + G+ ALA+AL
Sbjct: 181 EIELLFAIAALAIGFVIFVVTFIL--QIFVLWFNRLRESYADYNSFLVLGEGSKALATAL 238
Query: 229 MKIE---EAIRYRPLRRGNPATA----------HMFIVNPFRG--VDFAELFSTHPPTEK 273
KIE + IR P G TA H+ + R F ++ STHP +
Sbjct: 239 AKIEIYMQNIRIDPF-TGIIVTAPPVKVEEKDPHLLVEQWLRTKVSAFKDILSTHPYPAR 297
Query: 274 RIERLRKI 281
R + + ++
Sbjct: 298 RAQMIYRL 305
>pir||H69109 heat shock protein X related protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622950|gb|AAB86283.1| (AE000935) heat shock protein
X related protein [Methanobacterium thermoautotrophicum]
Length = 467
Score = 82.3 bits (200), Expect = 6e-15
Identities = 65/217 (29%), Positives = 99/217 (44%), Gaps = 46/217 (21%)
Query: 72 LHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDELEGVI 131
L+ IVE+ A GIP PKV + TM+ NA ATG GPG +V VT GL+ L DE+ VI
Sbjct: 260 LYRIVERAASAFGIPVPKVVLANTMIANAAATGPGPGRGLVLVTTGLVVQLTDDEILAVI 319
Query: 132 AHEISHIKNRDTLIQTLAAVLAGAIMILVDFARWSLWFGAYDDERDSGSVIGLILAIVLA 191
HE+ H+ RD +I L ++++ ++ + L+ ++++
Sbjct: 320 GHEMGHLVGRDPII--LFSIVSAEFILRLTV---------------------LLPVVIIS 356
Query: 192 PLAATLIQLA----ISRSREYLADETGARISGKPHALASALMKI---EEAIRYRPLRRGN 244
P+ ++ + +++ E AD A GKP LA AL KI + A+ R +R
Sbjct: 357 PILYIIVAMGVIFFVAKFFEARADLLSAMTLGKPEVLARALRKIGYQKLALEKRGSQRIT 416
Query: 245 PATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRKI 281
TA + HPP RI RL +
Sbjct: 417 GWTA----------------WDPHPPIYFRINRLENL 437
>pir||D71037 hypothetical protein PH1588 - Pyrococcus horikoshii
>gi|3258017|dbj|BAA30700.1| (AP000006) 264aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 264
Score = 75.7 bits (183), Expect = 6e-13
Identities = 66/224 (29%), Positives = 108/224 (47%), Gaps = 34/224 (15%)
Query: 64 VSEEEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLN 123
V+ E+ P L+ V ++A +A I P + I +P A++ + ++ GLL +LN
Sbjct: 52 VTWEDMPWLYDGVARMANKARISTPNIYIEDNPIPTAYSFQNS-----IVLSAGLLEILN 106
Query: 124 RDELEGVIAHEISHIKNRDTLIQTLAA----VLAGAIMILVDFARWSLWFGAYDDERDSG 179
+E+ V AHEI HIKN DT++ L ++ I+V FA +G
Sbjct: 107 EEEVLAVAAHEIGHIKNGDTVLFPLLRYGKYIMGIITAIIVIFA--------------TG 152
Query: 180 SVIGLILAIVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKI---EEAIR 236
+ ++ +V A +L++ R RE+LAD +I+ P+AL SAL ++ EEA++
Sbjct: 153 FITKVVSFLVFVIYAFSLLKFL--RKREFLADRVALQIAEVPYALKSALEELKFYEEALK 210
Query: 237 YR--PLRRGNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERL 278
+ PL P+ R L STHP ++RI R+
Sbjct: 211 TKEMPLPTIQPSIRR----EEKREPQIFPLPSTHPSYDERIARI 250
>pir||A75177 heat shock protein (htpx) PAB1974 - Pyrococcus abyssi (strain
Orsay) >gi|5458006|emb|CAB49496.1| (AJ248284) heat shock
protein (htpX) [Pyrococcus abyssi]
Length = 265
Score = 72.6 bits (175), Expect = 5e-12
Identities = 75/279 (26%), Positives = 126/279 (44%), Gaps = 37/279 (13%)
Query: 11 VLMAFLTALLVGIGYLIGGRGGMIIAFTIALFMNLISYWFSDSIVLSWYNARIVSEEEAP 70
+L+ +T L+ +G L G ++ TI L ++ FS + L ++ E+ P
Sbjct: 5 LLLIQITILMKTLGVLNG-----LVVTTILLIGLILLCRFSLKMKLPKSRYSRITWEDMP 59
Query: 71 ELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLHLLNRDELEGV 130
L+ + ++A +A I P + I +P A++ + ++ GL +L+RDE+ V
Sbjct: 60 WLYDGIARMANRARIQTPTIYIEDNPIPIAYSFQNS-----IVLSAGLFEILDRDEILAV 114
Query: 131 IAHEISHIKNRDTLIQTL---AAVLAGAIMILVDFARWSLWFGAYDDERDSGSVIGLILA 187
AHEI HIKN DT + L + G + ++ F S+ LI
Sbjct: 115 AAHEIGHIKNGDTFLFPLLRYGKYVMGIMTLITVFIA-------------KNSLTSLISV 161
Query: 188 IVLAPLAATLIQLAISRSREYLADETGARISGKPHALASALMKI---EEAI--RYRPLRR 242
V TL++ R RE+ AD +I+ P+AL +AL ++ EE++ + PL
Sbjct: 162 GVFLTYMVTLLRFL--RKREFKADRIALQIAEVPYALKTALEELKFYEESMLGKDTPLPT 219
Query: 243 GNPATAHMFIVNPFRGVDFAELFSTHPPTEKRIERLRKI 281
P+ N + LFSTHP E+RI ++ I
Sbjct: 220 IQPSLDRK--ENNYNQQTI--LFSTHPTYEERIAKIMSI 254
>pir||S76474 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1653691|dbj|BAA18603.1| (D90915) hypothetical
protein [Synechocystis sp.]
Length = 669
Score = 71.0 bits (171), Expect = 2e-11
Identities = 63/256 (24%), Positives = 112/256 (43%), Gaps = 36/256 (14%)
Query: 3 LGLWIRTGVLMAFLTALLVGIGYLIGGRGGMIIAFTIALFMN--LISYWFSDSIVLSWYN 60
L W+ G L A+ +G+G I+ +ALF N +I W N
Sbjct: 153 LAWWLAQGQWQKLL-AISLGLG---------IVVNFLALFYNVPIIDLINRRIYGTQWVN 202
Query: 61 ARIVSEEEAPELHYIVEKLARQAGIPKPKVAIVPTMVPNAFATGRGPGNAVVAVTEGLLH 120
V ++ +PE ++ ++AR P PK+ I+P P F G N+ V +++G+
Sbjct: 203 LGAV-QKYSPEAGELMLRVARAKTFPIPKLGIIPDNRPVMFTYGVQQNNSRVVLSQGIFR 261
Query: 121 LLNRDELEGVIAHEISHIKNRDTLIQTLAAVLAGAIMILVDFARW-SLWFGAYDDERDSG 179
L+ +E+ ++ HE++HI RD + T + W +++ Y + + +
Sbjct: 262 YLSAEEIATLLGHELAHIVRRDCALLTC-------------MSGWGQVFYWLYCELQMAR 308
Query: 180 SVIGLILAIVLAPLAATLIQL---------AISRSREYLADETGARISGKPHALASALMK 230
+ I I++ PL + + +R+REY AD +G P+AL AL+K
Sbjct: 309 TSQPAIAKILITPLVWICLAMFRINQGSNRYFARTREYYADHFSVNYTGNPNALTRALVK 368
Query: 231 IEEAIRYRPLRRGNPA 246
+ A+ R + PA
Sbjct: 369 MTRALVKRERQAEKPA 384
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.325 0.141 0.415
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105488516
Number of Sequences: 2977
Number of extensions: 4422309
Number of successful extensions: 14936
Number of sequences better than 1.0e-10: 33
Number of HSP's better than 0.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 14864
Number of HSP's gapped (non-prelim): 34
length of query: 289
length of database: 189,106,746
effective HSP length: 53
effective length of query: 236
effective length of database: 157,386,935
effective search space: 37143316660
effective search space used: 37143316660
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.6 bits)
S2: 165 (68.7 bits)