BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0759 (PAB0759) DE:Hypothetical protein
(226 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75094 hypothetical protein PAB0759 - Pyrococcus abyssi (st... 455 e-127
pir||E71070 hypothetical protein PH1257 - Pyrococcus horikoshii ... 385 e-106
sp|Q57990|Y570_METJA HYPOTHETICAL PROTEIN MJ0570 >gi|2128383|pir... 252 3e-66
pir||D69156 conserved hypothetical protein MTH432 - Methanobacte... 230 9e-60
gi|11499256 conserved hypothetical protein [Archaeoglobus fulgid... 206 2e-52
gb|AAK40980.1| Conserved hypothetical protein [Sulfolobus solfat... 166 2e-40
emb|CAB57625.1| (Y18930) hypothetical protein [Sulfolobus solfat... 166 2e-40
gb|AAG18948.1| (AE004996) Vng0391c [Halobacterium sp. NRC-1] 157 8e-38
pir||G72735 hypothetical protein APE0421 - Aeropyrum pernix (str... 142 3e-33
emb|CAC11665.1| (AL445064) conserved hypothetical protein [Therm... 130 1e-29
gb|AAF48097.2| (AE003487) CG1578 gene product [Drosophila melano... 115 5e-25
emb|CAA62663.1| (X91258) L3177 [Saccharomyces cerevisiae] 109 3e-23
gi|6323172 Ylr143wp [Saccharomyces cerevisiae] >gi|2131787|pir||... 109 3e-23
gb|AAF63779.1| (AC022287) unknown protein [Arabidopsis thaliana] 104 1e-21
pir||T40556 hypothetical protein SPAC577.12 - fission yeast (Sc... 103 2e-21
gi|11498327 conserved hypothetical protein [Archaeoglobus fulgid... 100 1e-20
pir||G75180 hypothetical protein PAB0415 - Pyrococcus abyssi (st... 75 1e-12
pir||D71145 hypothetical protein PH0375 - Pyrococcus horikoshii ... 70 3e-11
>pir||B75094 hypothetical protein PAB0759 - Pyrococcus abyssi (strain Orsay)
>gi|5458567|emb|CAB50055.1| (AJ248286) hypothetical
protein [Pyrococcus abyssi]
Length = 226
Score = 455 bits (1158), Expect = e-127
Identities = 226/226 (100%), Positives = 226/226 (100%)
Query: 1 MVGLADVAVLYSGGKDSNYALYWALKRFKVRYLVSMVSENEESYMYHTPNVELTDLQARA 60
MVGLADVAVLYSGGKDSNYALYWALKRFKVRYLVSMVSENEESYMYHTPNVELTDLQARA
Sbjct: 1 MVGLADVAVLYSGGKDSNYALYWALKRFKVRYLVSMVSENEESYMYHTPNVELTDLQARA 60
Query: 61 VGIPLVKGFTKGEKEREVEDLKKVLEGLKIEGVVAGALASRYQRERIERIAKELGLKVYA 120
VGIPLVKGFTKGEKEREVEDLKKVLEGLKIEGVVAGALASRYQRERIERIAKELGLKVYA
Sbjct: 61 VGIPLVKGFTKGEKEREVEDLKKVLEGLKIEGVVAGALASRYQRERIERIAKELGLKVYA 120
Query: 121 PAWGRNPYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKKLNEMYGIHIA 180
PAWGRNPYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKKLNEMYGIHIA
Sbjct: 121 PAWGRNPYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKKLNEMYGIHIA 180
Query: 181 GEGGEFETFVLDAPFFRRRIVIDEAEKLWDGLSGKLIIKRAHLEEK 226
GEGGEFETFVLDAPFFRRRIVIDEAEKLWDGLSGKLIIKRAHLEEK
Sbjct: 181 GEGGEFETFVLDAPFFRRRIVIDEAEKLWDGLSGKLIIKRAHLEEK 226
>pir||E71070 hypothetical protein PH1257 - Pyrococcus horikoshii
>gi|3257676|dbj|BAA30359.1| (AP000005) 227aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 227
Score = 385 bits (979), Expect = e-106
Identities = 186/227 (81%), Positives = 209/227 (91%), Gaps = 1/227 (0%)
Query: 1 MVGLADVAVLYSGGKDSNYALYWALKR-FKVRYLVSMVSENEESYMYHTPNVELTDLQAR 59
MVGLADVAVLYSGGKDSNYALYWALK +VRYLVSMVSENEESYMYHTPNVELT LQAR
Sbjct: 1 MVGLADVAVLYSGGKDSNYALYWALKSGLRVRYLVSMVSENEESYMYHTPNVELTSLQAR 60
Query: 60 AVGIPLVKGFTKGEKEREVEDLKKVLEGLKIEGVVAGALASRYQRERIERIAKELGLKVY 119
A+GIP++KGFTKGEKE+EVEDLK VLEGLK++G+VAGALASRYQ+ERIE +A+ELGLKVY
Sbjct: 61 ALGIPIIKGFTKGEKEKEVEDLKNVLEGLKVDGIVAGALASRYQKERIENVARELGLKVY 120
Query: 120 APAWGRNPYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKKLNEMYGIHI 179
PAW ++PY+YM EII+LGF+V+FV VSAYGL+ESWLGR L+YK LEELKKL+E YGIHI
Sbjct: 121 TPAWEKDPYQYMLEIIKLGFKVVFVAVSAYGLNESWLGRELNYKNLEELKKLSEKYGIHI 180
Query: 180 AGEGGEFETFVLDAPFFRRRIVIDEAEKLWDGLSGKLIIKRAHLEEK 226
AGEGGEFETFVLD PFF+ +IVID+AEK WDGLSGK IIKRAHLE K
Sbjct: 181 AGEGGEFETFVLDMPFFKAKIVIDDAEKFWDGLSGKFIIKRAHLEWK 227
>sp|Q57990|Y570_METJA HYPOTHETICAL PROTEIN MJ0570 >gi|2128383|pir||B64371 hypothetical
protein MJ0570 - Methanococcus jannaschii
>gi|1591277|gb|AAB98564.1| (U67506) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 223
Score = 252 bits (636), Expect = 3e-66
Identities = 130/221 (58%), Positives = 164/221 (73%), Gaps = 2/221 (0%)
Query: 7 VAVLYSGGKDSNYALYWALKR-FKVRYLVSMVSENEESYMYHTPNVELTDLQARAVGIPL 65
VAVLYSGGKDSNYALYWALK F V+YLV++ SEN+ESYM+H PNV LT+L A AVGIPL
Sbjct: 3 VAVLYSGGKDSNYALYWALKEGFDVKYLVNVESENKESYMFHIPNVHLTELSAEAVGIPL 62
Query: 66 VKGFTKGEKEREVEDLKKVLEGLKIEGVVAGALASRYQRERIERIAKELGLKVYAPAWGR 125
+K +TKGEKE+EVEDLKK LE L +EG+V GA+AS YQ+ RI+R+ +ELGLK +AP W +
Sbjct: 63 IKLYTKGEKEKEVEDLKKGLEKLDVEGIVTGAVASIYQKSRIDRVCEELGLKSFAPLWHK 122
Query: 126 NPYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKKLNEMYGIHIAGEGGE 185
+P +R + EL F V VGV AYGL + WLG+ + + +++L + E YGIH A EGGE
Sbjct: 123 DPEWILRTVSEL-FNVRIVGVYAYGLGKEWLGKRITKENIDKLLNICEKYGIHKAFEGGE 181
Query: 186 FETFVLDAPFFRRRIVIDEAEKLWDGLSGKLIIKRAHLEEK 226
ETFV DAP F++RI + EAE W G IK+A L +K
Sbjct: 182 AETFVFDAPMFKKRIEVVEAEIEWHETWGIYHIKKAKLVDK 222
>pir||D69156 conserved hypothetical protein MTH432 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621497|gb|AAB84938.1| (AE000827) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 226
Score = 230 bits (581), Expect = 9e-60
Identities = 121/222 (54%), Positives = 157/222 (70%), Gaps = 3/222 (1%)
Query: 8 AVLYSGGKDSNYALYWALKRFKVRYLVSMVSENEESYMYHTPNVELTDLQARAVGIPLVK 67
AVLYSGGKDS ALY AL+ +V +LVS++S+N ES+MYH PN+ LT L A AVGIPL++
Sbjct: 4 AVLYSGGKDSTMALYHALQESEVEFLVSVISDNPESHMYHVPNIHLTALLAEAVGIPLIE 63
Query: 68 GFTKGEKEREVEDLKKVLEGLK---IEGVVAGALASRYQRERIERIAKELGLKVYAPAWG 124
T G +E EVEDL L+ L+ +E V +GAL S YQ+ RI+ I + LGL+ AP W
Sbjct: 64 SRTAGVEEEEVEDLAGTLKTLRERGVEAVYSGALYSEYQKSRIDSICRRLGLRSVAPLWH 123
Query: 125 RNPYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKKLNEMYGIHIAGEGG 184
R+P +YM EI++LGFRV+ V+A GLDESWLGR +D K ++EL L+E YGI+ A EGG
Sbjct: 124 RDPLDYMEEIVDLGFRVMVTAVAAEGLDESWLGRIVDRKMIDELADLSERYGINPAFEGG 183
Query: 185 EFETFVLDAPFFRRRIVIDEAEKLWDGLSGKLIIKRAHLEEK 226
E E+ VLD P F++R+ I E EK W +G L IKRA L +K
Sbjct: 184 EAESLVLDGPIFKKRLEILEYEKKWFFDNGFLDIKRAVLVDK 225
>gi|11499256 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7450312|pir||A69458 conserved hypothetical protein
AF1666 - Archaeoglobus fulgidus
>gi|2648889|gb|AAB89582.1| (AE000988) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 222
Score = 206 bits (519), Expect = 2e-52
Identities = 99/214 (46%), Positives = 146/214 (67%), Gaps = 1/214 (0%)
Query: 7 VAVLYSGGKDSNYALYWALKRFKVRYLVSMVSENEESYMYHTPNVELTDLQARAVGIPLV 66
VA L SGGKDS AL+ ++ +V LV + ENE+SYM+H+ N+ + D+ A ++G+PL
Sbjct: 3 VAALISGGKDSILALHKVAEKHEVISLVGIFPENEDSYMFHSVNLHMLDVVAESLGLPLK 62
Query: 67 KGFTKGEKEREVEDLKKVLEGLKIEGVVAGALASRYQRERIERIAKELGLKVYAPAWGRN 126
K + GE+E+EV++L + + + + G + S YQ++R E++ +E+G+K+ AP W N
Sbjct: 63 KLYVSGEEEKEVDELAGQIGEVDADALCIGGIESNYQKKRFEKVCREVGMKLIAPLWKAN 122
Query: 127 PYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKKLNEMYGIHIAGEGGEF 186
P + M E+ E F I V VSA GLDES+LGR +D + +E+LK+LNE Y +H+AGEGGEF
Sbjct: 123 PEKLMYEVAE-KFEAIIVSVSAMGLDESFLGRRIDKECIEDLKRLNEKYSVHLAGEGGEF 181
Query: 187 ETFVLDAPFFRRRIVIDEAEKLWDGLSGKLIIKR 220
ET VLDAP +R RI +D K WDG+ G +I+R
Sbjct: 182 ETLVLDAPLYRFRIKVDSIRKFWDGVRGYCLIER 215
>gb|AAK40980.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 222
Score = 166 bits (416), Expect = 2e-40
Identities = 89/201 (44%), Positives = 129/201 (63%), Gaps = 4/201 (1%)
Query: 7 VAVLYSGGKDSNYALYWAL-KRFKVRYLVSMVSENEESYMYHTPNVELTDLQARAVGIPL 65
+ VLYSGGKDS YAL+WA+ K F+V L++++ + E+S+M+ PNV T QA A+ L
Sbjct: 3 ICVLYSGGKDSTYALHWAVFKGFEVVCLITLIPKREDSWMFQYPNVIYTKYQAEAMDFKL 62
Query: 66 VKGFTKGEKEREVEDLKKVLEGLKIEG---VVAGALASRYQRERIERIAKELGLKVYAPA 122
+ T GEK++E+EDLKK L K EG +V+GAL S YQR I IA+ELGLK Y P
Sbjct: 63 ITFGTSGEKDKELEDLKKALLQAKNEGADGIVSGALLSDYQRLNISIIAEELGLKTYTPL 122
Query: 123 WGRNPYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKKLNEMYGIHIAGE 182
W ++ EYMR +++ GF+ I SAYG +G+ + + +E++ + YG + A E
Sbjct: 123 WRKSQEEYMRWLVKEGFKFIITSASAYGFPFDLVGKEITTEDVEKIIERARRYGFNPAFE 182
Query: 183 GGEFETFVLDAPFFRRRIVID 203
GGE ETFV AP F+ ++ ++
Sbjct: 183 GGEAETFVTYAPLFKTQLRVN 203
>emb|CAB57625.1| (Y18930) hypothetical protein [Sulfolobus solfataricus]
Length = 222
Score = 166 bits (416), Expect = 2e-40
Identities = 89/201 (44%), Positives = 129/201 (63%), Gaps = 4/201 (1%)
Query: 7 VAVLYSGGKDSNYALYWAL-KRFKVRYLVSMVSENEESYMYHTPNVELTDLQARAVGIPL 65
+ VLYSGGKDS YAL+WA+ K F+V L++++ + E+S+M+ PNV T QA A+ L
Sbjct: 3 ICVLYSGGKDSTYALHWAVFKGFEVVCLITLIPKREDSWMFQYPNVIYTKYQAEAMDFKL 62
Query: 66 VKGFTKGEKEREVEDLKKVLEGLKIEG---VVAGALASRYQRERIERIAKELGLKVYAPA 122
+ T GEK++E+EDLKK L K EG +V+GAL S YQR I IA+ELGLK Y P
Sbjct: 63 ITFGTSGEKDKELEDLKKALLQAKNEGADGIVSGALLSDYQRLNISIIAEELGLKTYTPL 122
Query: 123 WGRNPYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKKLNEMYGIHIAGE 182
W ++ EYMR +++ GF+ I SAYG +G+ + + +E++ + YG + A E
Sbjct: 123 WRKSQEEYMRWLVKEGFKFIITSASAYGFPFDLVGKEITTEDVEKIIERARRYGFNPAFE 182
Query: 183 GGEFETFVLDAPFFRRRIVID 203
GGE ETFV AP F+ ++ ++
Sbjct: 183 GGEAETFVTYAPLFKTQLRVN 203
>gb|AAG18948.1| (AE004996) Vng0391c [Halobacterium sp. NRC-1]
Length = 240
Score = 157 bits (394), Expect = 8e-38
Identities = 97/233 (41%), Positives = 134/233 (56%), Gaps = 22/233 (9%)
Query: 10 LYSGGKDSNYALYWALKR-FKVRYLVSMVSENEESYMYHTPNVELTDLQARAVGIPLVK- 67
L+SGGKDS++ALY AL+ V LV++ E++ SYMYH P L +L A ++GIP+V
Sbjct: 9 LFSGGKDSSWALYRALEAGLDVGRLVTVHPESD-SYMYHVPATRLAELAAESIGIPVVNV 67
Query: 68 ------------GFTKGEKERE-----VEDLKKVLEGLKIEGVVAGALASRYQRERIERI 110
+G+ E E V D+ L+ + GV+AGA+ S +Q R+E +
Sbjct: 68 TPDAFETADVADAGAQGDTELEPLEDAVTDVADTLDD-GLAGVIAGAVESDFQTSRMEGM 126
Query: 111 AKELGLKVYAPAWGRNPYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKK 170
LG ++YAP W + P E ++ GF + + V+AYGLD+SWLGR LD AL L
Sbjct: 127 CDRLGCELYAPLWQQPPRELADAMLTAGFEIRIIQVAAYGLDKSWLGRRLDRDALAALAA 186
Query: 171 LNEMYGIHIAGEGGEFETFVLDAPFFRRRIVIDEAEKLWDGLSGKLIIKRAHL 223
LN+ YG+H+ GEGGEFET V DAP R I +D E +W G G + I A L
Sbjct: 187 LNDEYGVHMLGEGGEFETLVTDAPHMDRPIRLD-YETVWAGDRGHIEITEACL 238
>pir||G72735 hypothetical protein APE0421 - Aeropyrum pernix (strain K1)
>gi|5104063|dbj|BAA79379.1| (AP000059) 238aa long
hypothetical protein [Aeropyrum pernix]
Length = 238
Score = 142 bits (355), Expect = 3e-33
Identities = 82/206 (39%), Positives = 119/206 (56%), Gaps = 7/206 (3%)
Query: 4 LADVAVLYSGGKDSNYALYWALKRF-KVRYLVSMVSENEESYMYHTPNVELTDLQARAVG 62
+A V L SGGKDSNYALY +L R +V ++++ +S+M+HT +E LQA A+G
Sbjct: 1 MARVCALLSGGKDSNYALYLSLARGDEVVCILAVKPRRRDSWMFHTAALEAPRLQAEAMG 60
Query: 63 IPLV--KGFTKGEKEREVEDLKKVLEGLKIEG----VVAGALASRYQRERIERIAKELGL 116
+ + G +EREVE+LK VL L+ E +V G +ASRYQ ER +A+ +
Sbjct: 61 LSHAYREAVVSGVREREVEELKAVLTRLRSETGFDTIVLGGIASRYQLERARMLARHVAA 120
Query: 117 KVYAPAWGRNPYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKKLNEMYG 176
VYAP WG +P E++ ++ GF+ + S GL ++GR D E+ L+ YG
Sbjct: 121 GVYAPIWGVDPEEHLLNLVRNGFKFVISRASTMGLGAEYVGRVFDEDLAREVIALSRRYG 180
Query: 177 IHIAGEGGEFETFVLDAPFFRRRIVI 202
+ A EGGE ET VLDAP +R + +
Sbjct: 181 FNPAFEGGEAETLVLDAPHYRMGLCV 206
>emb|CAC11665.1| (AL445064) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 216
Score = 130 bits (324), Expect = 1e-29
Identities = 79/209 (37%), Positives = 113/209 (53%), Gaps = 16/209 (7%)
Query: 10 LYSGGKDSNYALYWALKRFKVRYLVSMVSENEESYMYHTPNVELTDLQARAVGIP----L 65
L SGGKDS + Y A+++ +V E SYM+H PNV+ A +GI L
Sbjct: 6 LISGGKDSFLSAYIAMQQGFDIVRAMIVRPQEYSYMFHFPNVDKAGYVAGMLGIEPEFVL 65
Query: 66 VKGFTKGEKEREVEDLKKVLEGLKIEGVVAGALASRYQRERIERIAKELGLKVYAPAWGR 125
GF + KE + +K +V+GA+AS +Q+ R+ERIA E + Y P W
Sbjct: 66 EDGFQQRVKEYASDGVK---------AIVSGAIASEFQKTRLERIATEFSIISYTPLWKV 116
Query: 126 NPYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKKLNEMYGIHIAGEGGE 185
+ + MR+I++ G R + V VSA G E+ LGR +D K LE L L + YGI+I GEGGE
Sbjct: 117 DQHRVMRDILDAGIRAMIVSVSAEGFSENDLGREIDDKYLERLYHLEKRYGINITGEGGE 176
Query: 186 FETFVLDAPFFRRRIVIDEAEKLWDGLSG 214
+ETFV F + + + ++W G G
Sbjct: 177 YETFVFG---FGNKYISVKGHRIWKGSGG 202
>gb|AAF48097.2| (AE003487) CG1578 gene product [Drosophila melanogaster]
Length = 729
Score = 115 bits (285), Expect = 5e-25
Identities = 74/222 (33%), Positives = 121/222 (54%), Gaps = 21/222 (9%)
Query: 7 VAVLYSGGKDSNYALYWALKR-FKVRYLVSMVSENEE---SYMYHTPNVELTDLQARAVG 62
V + SGGKDS Y + + ++ L ++ ++ + S+MY T ++ A A+G
Sbjct: 3 VVAMVSGGKDSCYNMMQCVAEGHEIVALANLHPKDRDELDSFMYQTVGHMGIEILASAMG 62
Query: 63 IPLVKGFTKGEKER-----------EVEDLKKVLEG----LKIEGVVAGALASRYQRERI 107
+PL + TKG+ + EVEDL +LE L+++ V GA+ S YQR R+
Sbjct: 63 LPLYRRETKGKSTQTGKQYVPTDDDEVEDLYSLLETCKHELQVDAVAVGAILSDYQRVRV 122
Query: 108 ERIAKELGLKVYAPAWGRNPYEYMREIIELGFRVIFVGVSAYGL-DESWLGRGLDYKALE 166
E + L L A W R+ E ++E+I+ I + V+A GL + LG+ L +
Sbjct: 123 ENVCSRLNLISLAYLWRRDQTELLQEMIDCQVHAIIIKVAALGLVPDRHLGKSLR-EMQP 181
Query: 167 ELKKLNEMYGIHIAGEGGEFETFVLDAPFFRRRIVIDEAEKL 208
L K+ + YG+++ GEGGE+ETF LD P FR+RIV+++ + +
Sbjct: 182 HLLKMRDKYGLNVCGEGGEYETFTLDCPLFRQRIVVEDIQTI 223
>emb|CAA62663.1| (X91258) L3177 [Saccharomyces cerevisiae]
Length = 694
Score = 109 bits (270), Expect = 3e-23
Identities = 77/227 (33%), Positives = 114/227 (49%), Gaps = 41/227 (18%)
Query: 10 LYSGGKDSNYALYWALKR----FKVRYLVSMVSENEE--SYMYHTPNVELTDLQARAVGI 63
L SGGKDS Y ++ LK + + SE +E S+M+ T +L D ++ +G+
Sbjct: 6 LISGGKDSFYNIFHCLKNNHELIALGNIYPKESEEQELDSFMFQTVGHDLIDYYSKCIGV 65
Query: 64 PLVK-------------GFTKGEKEREVEDLKKVLEGLK-----IEGVVAGALASRYQRE 105
PL + +T + + E+E+L ++L +K +E V GA+ S YQR
Sbjct: 66 PLFRRSILRNTSNNVELNYTATQDD-EIEELFELLRTVKDKIPDLEAVSVGAILSSYQRT 124
Query: 106 RIERIAKELGLKVYAPAWGRNPYEYMREIIELG---------------FRVIFVGVSAYG 150
R+E + LGL V + W R+ E M E+ + F + V+A G
Sbjct: 125 RVENVCSRLGLVVLSYLWQRDQAELMGEMCLMSKDVNNVENDTNSGNKFDARIIKVAAIG 184
Query: 151 LDESWLGRGLDYKALEELKKLNEMYGIHIAGEGGEFETFVLDAPFFR 197
L+E LG L L+KLN++Y +HI GEGGEFET VLDAPFF+
Sbjct: 185 LNEKHLGMSLPMMQ-PVLQKLNQLYQVHICGEGGEFETMVLDAPFFQ 230
>gi|6323172 Ylr143wp [Saccharomyces cerevisiae] >gi|2131787|pir||S64985
hypothetical protein YLR143w - yeast (Saccharomyces
cerevisiae) >gi|1256896|gb|AAB82389.1| (U53881) Ylr143wp
[Saccharomyces cerevisiae] >gi|1360566|emb|CAA97715.1|
(Z73315) ORF YLR143w [Saccharomyces cerevisiae]
Length = 685
Score = 109 bits (270), Expect = 3e-23
Identities = 77/227 (33%), Positives = 114/227 (49%), Gaps = 41/227 (18%)
Query: 10 LYSGGKDSNYALYWALKR----FKVRYLVSMVSENEE--SYMYHTPNVELTDLQARAVGI 63
L SGGKDS Y ++ LK + + SE +E S+M+ T +L D ++ +G+
Sbjct: 6 LISGGKDSFYNIFHCLKNNHELIALGNIYPKESEEQELDSFMFQTVGHDLIDYYSKCIGV 65
Query: 64 PLVK-------------GFTKGEKEREVEDLKKVLEGLK-----IEGVVAGALASRYQRE 105
PL + +T + + E+E+L ++L +K +E V GA+ S YQR
Sbjct: 66 PLFRRSILRNTSNNVELNYTATQDD-EIEELFELLRTVKDKIPDLEAVSVGAILSSYQRT 124
Query: 106 RIERIAKELGLKVYAPAWGRNPYEYMREIIELG---------------FRVIFVGVSAYG 150
R+E + LGL V + W R+ E M E+ + F + V+A G
Sbjct: 125 RVENVCSRLGLVVLSYLWQRDQAELMGEMCLMSKDVNNVENDTNSGNKFDARIIKVAAIG 184
Query: 151 LDESWLGRGLDYKALEELKKLNEMYGIHIAGEGGEFETFVLDAPFFR 197
L+E LG L L+KLN++Y +HI GEGGEFET VLDAPFF+
Sbjct: 185 LNEKHLGMSLPMMQ-PVLQKLNQLYQVHICGEGGEFETMVLDAPFFQ 230
>gb|AAF63779.1| (AC022287) unknown protein [Arabidopsis thaliana]
Length = 715
Score = 104 bits (256), Expect = 1e-21
Identities = 85/249 (34%), Positives = 131/249 (52%), Gaps = 30/249 (12%)
Query: 7 VAVLYSGGKDSNYALYWALKR-FKVRYLVSMVSENE-----ESYMYHTPNVELTDLQARA 60
V L SGGKDS YA+ ++ ++ L +++ ++ +SYMY T ++ A
Sbjct: 3 VVALVSGGKDSCYAMMKCIQYGHEIVALANLLPVDDSVDELDSYMYQTVGHQILVGYAEC 62
Query: 61 VGIPL----VKGFTKGEK-------EREVEDLKKVLEGLK-----IEGVVAGALASRYQR 104
+ +PL ++G ++ +K + EVED+ +L +K I V +GA+AS YQR
Sbjct: 63 MNVPLFRRRIRGSSRHQKLSYQMTPDDEVEDMFVLLSEVKRQIPSITAVSSGAIASDYQR 122
Query: 105 ERIERIAKELGLKVYAPAWGRNPYEYMREIIELGFRVIFVGVSAYGLDES-WLGRGLDYK 163
R+E I LGL A W ++ ++++I G + I V V+A GLD S LG+ L +
Sbjct: 123 LRVESICSRLGLVSLAFLWKQDQTLLLQDMIANGIKAILVKVAAIGLDPSKHLGKDLAFM 182
Query: 164 ALEELKKLNEMYGIHIAGEGGEFETFVLDAPFF-RRRIVIDEAEKLW---DGLS--GKLI 217
L KL E YG ++ GEGGE+ET LD P F IV+DE + + D ++ G L
Sbjct: 183 E-PYLLKLKEKYGSNVCGEGGEYETLTLDCPLFTNASIVLDEYQVVLHSPDSIAPVGVLH 241
Query: 218 IKRAHLEEK 226
HLE+K
Sbjct: 242 PSTFHLEKK 250
>pir||T40556 hypothetical protein SPAC577.12 - fission yeast
(Schizosaccharomyces pombe) >gi|5830512|emb|CAB54820.1|
(AL110506) conserved hypothetical protein
[Schizosaccharomyces pombe]
Length = 606
Score = 103 bits (255), Expect = 2e-21
Identities = 68/218 (31%), Positives = 115/218 (52%), Gaps = 22/218 (10%)
Query: 10 LYSGGKDSNYALYWALKR-FKVRYLVSMVSENE----ESYMYHTPNVELTDLQARAVGIP 64
L SGGKDS + L + +V L ++ E+ +S+MY + ++ L A +P
Sbjct: 6 LISGGKDSCFNLMHCVSLGHEVVALANLHPEDGKDEIDSFMYQSVGHDVIPLYAECFDLP 65
Query: 65 LVKGFTKGE-----------KEREVEDLKKVLEGL-----KIEGVVAGALASRYQRERIE 108
L + G+ ++ E EDL ++++ + +E V GA+ S YQR R+E
Sbjct: 66 LYREKIGGQSINQNLDYQFTEKDETEDLYRLIKRVLTNHPDLEAVSTGAILSTYQRTRVE 125
Query: 109 RIAKELGLKVYAPAWGRNPYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEEL 168
+ K LGLK + W ++ + + +++ G I + V+A GL LG+ L + ++L
Sbjct: 126 NVCKRLGLKSLSFLWQKDQEKLLNDMVVSGLNAILIKVAAIGLTRKDLGKSL-AEMQDKL 184
Query: 169 KKLNEMYGIHIAGEGGEFETFVLDAPFFRRRIVIDEAE 206
LN+ + +H GEGGE+ET VLD P F++RIV+ + E
Sbjct: 185 LTLNKKFELHPCGEGGEYETLVLDCPLFKKRIVLTDKE 222
>gi|11498327 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7450315|pir||H69339 conserved hypothetical protein
AF0720 - Archaeoglobus fulgidus
>gi|2649895|gb|AAB90521.1| (AE001055) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 214
Score = 100 bits (247), Expect = 1e-20
Identities = 71/209 (33%), Positives = 101/209 (47%), Gaps = 23/209 (11%)
Query: 10 LYSGGKDSNYALYWALKRFKVRYLVSMVSENEESYMYHTPNVELTDLQARAVGIPLVKGF 69
++SGGKDS AL+ A+K +V LV M+ + H N E+ QA ++GI +V
Sbjct: 11 MWSGGKDSCLALWRAMKEMEVDSLVCMMQHGKARA--HGINAEIVKAQAESIGIDIVV-- 66
Query: 70 TKGEKEREVED----LKKVLEGLKIEGVVAGALASRYQRERIERIAKELGLKVYAPAWGR 125
+E ED LK + L +E V G + R IER+ +E G+K + P WG
Sbjct: 67 ----EEATWEDYGRRLKGIFHRLGVERAVFGDIYLEEHRTWIERVCRESGVKPFFPLWGE 122
Query: 126 NPYEYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKKLNEMYGIHIAGEGGE 185
+ + E IE GF + D LGR D K ++E+KK GI GE GE
Sbjct: 123 STEKLAEEFIEAGFEAYVIATKKEFRD--LLGRRFDRKFVDEVKK----RGIDPCGEDGE 176
Query: 186 FETFVLDAPFFRRRIVID-----EAEKLW 209
F T V+D P F +R+ + E E+ W
Sbjct: 177 FHTLVVDGPIFEKRLEVKLLDAYEGERYW 205
>pir||G75180 hypothetical protein PAB0415 - Pyrococcus abyssi (strain Orsay)
>gi|5458036|emb|CAB49526.1| (AJ248284) hypothetical
protein [Pyrococcus abyssi]
Length = 210
Score = 74.5 bits (180), Expect = 1e-12
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 9/190 (4%)
Query: 10 LYSGGKDSNYALYWALKR-FKVRYLVSMVSENEESYMYHTPNVELTDLQARAVGIPLVKG 68
L+SGGKD YA+Y A K V YL+ + ++ + +P+ E L R + + K
Sbjct: 6 LFSGGKDGLYAVYLAEKEGIDVPYLLLL-----KTTIGLSPHWE-NRLSLRKLANSMGKA 59
Query: 69 FTKGEKEREVEDLKKVLEGLKIEGVVAGALASRYQRERIERIAKELGLKVYAPAWGRNPY 128
+ + L ++L L ++ ++AG + + +E + ++ G+KV+ P WGR+
Sbjct: 60 ILTFDMAEGSDSLVELLSSLSVDVLIAGDVYLEDHKSWLESLGEKAGIKVFEPLWGRDSR 119
Query: 129 EYMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKKLNEMYGIHIAGEGGEFET 188
+ E+++ GF+ + V L S + G + + +L + Y + GE GEF T
Sbjct: 120 KLAEEMLKNGFKWAIIAVDKSKLPRSVI--GYKFSSSRDLDRFLANYDVDPLGEYGEFHT 177
Query: 189 FVLDAPFFRR 198
VL +P F R
Sbjct: 178 VVLSSPLFDR 187
>pir||D71145 hypothetical protein PH0375 - Pyrococcus horikoshii
>gi|3256766|dbj|BAA29449.1| (AP000002) 221aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 221
Score = 69.9 bits (168), Expect = 3e-11
Identities = 55/206 (26%), Positives = 95/206 (45%), Gaps = 15/206 (7%)
Query: 11 YSGGKDSNYALYWALKR-FKVRYLVSMVSENEESYMYHTPNVELTDLQARAVGIPLVKGF 69
+SGGKD YALY A + +V YL +V + H N++ A+ + +
Sbjct: 8 FSGGKDGLYALYLAEEMGIEVPYL--LVLKTSIGLSPHWENLDALKTLAKV----MEREI 61
Query: 70 TKGEKEREVEDLKKVLEGLKIEGVVAGALASRYQRERIERIAKELGLKVYAPAWGRNPYE 129
+ R + L + + L ++ ++AG + ++ +A+E +K P WGRN +
Sbjct: 62 LTFDMRRGSKALAEFISSLDVDYLIAGDVYLEDHILWVKSLAEEANVKPLEPLWGRNTRK 121
Query: 130 YMREIIELGFRVIFVGVSAYGLDESWLGRGLDYKALEELKK-LNEMYGIHIAGEGGEFET 188
E++ GF + V L + WL G ++++E+L+ L + GE GEF T
Sbjct: 122 LAEEMLREGFNWAIIAVDKRKLGKEWL--GYTFRSIEDLENFLRANPNVDPLGEVGEFHT 179
Query: 189 FVLDAPFFRRRI-----VIDEAEKLW 209
VL++P F I+E E+ W
Sbjct: 180 VVLNSPLFALNFELKVESIEEDERYW 205
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.141 0.406
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85340115
Number of Sequences: 2977
Number of extensions: 3605215
Number of successful extensions: 14207
Number of sequences better than 1.0e-10: 18
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 14162
Number of HSP's gapped (non-prelim): 18
length of query: 226
length of database: 189,106,746
effective HSP length: 54
effective length of query: 172
effective length of database: 156,788,448
effective search space: 26967613056
effective search space used: 26967613056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 163 (67.9 bits)