BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0763 (cmk) DE:CYTIDYLATE KINASE (CMK)
(181 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9UZJ6|KCY_PYRAB CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHA... 367 e-101
sp|O58988|KCY_PYRHO CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHA... 332 2e-90
sp|Q58071|KCY_METJA CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHA... 215 3e-55
gi|11499484 cytidylate kinase (cmk) [Archaeoglobus fulgidus] >gi... 162 2e-39
gb|AAG19965.1| (AE005078) cytidydylate kinase; Cmk [Halobacteriu... 151 6e-36
sp|O26138|KCY_METTH CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHA... 137 7e-32
sp|Q9YDD5|KCY_AERPE CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHA... 134 8e-31
sp|O05982|KCY_SULAC CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHA... 133 1e-30
gb|AAK40992.1| Cytidylate kinase (cmK) [Sulfolobus solfataricus] 125 3e-28
sp|Q9UX81|KCY_SULSO CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHA... 125 3e-28
emb|CAC12369.1| (AL445067) probable cytidylate kinase [Thermopla... 116 2e-25
sp|O51759|KCY2_BORBU CYTIDYLATE KINASE 2 (CK 2) (CYTIDINE MONOPH... 104 9e-22
pir||E71335 probable cytidylate kinase (cmk) - syphilis spiroche... 100 2e-20
sp|O83362|KCY_TREPA CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHA... 100 2e-20
>sp|Q9UZJ6|KCY_PYRAB CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHATE KINASE) (CMP KINASE)
>gi|7451035|pir||H75094 cytidylate kinase (cmk) PAB0763
- Pyrococcus abyssi (strain Orsay)
>gi|5458573|emb|CAB50061.1| (AJ248286) CYTIDYLATE KINASE
(CMK) [Pyrococcus abyssi]
Length = 181
Score = 367 bits (933), Expect = e-101
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MPKGCLVITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAEL 60
MPKGCLVITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAEL
Sbjct: 1 MPKGCLVITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAEL 60
Query: 61 HPEIDREVDRRQVEAAKECNVVIEGRLAGWMVKNADLKIWLDAPIRVRAERVAKREGISV 120
HPEIDREVDRRQVEAAKECNVVIEGRLAGWMVKNADLKIWLDAPIRVRAERVAKREGISV
Sbjct: 61 HPEIDREVDRRQVEAAKECNVVIEGRLAGWMVKNADLKIWLDAPIRVRAERVAKREGISV 120
Query: 121 EEAFMKIAEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIVKAAIDHLYEK 180
EEAFMKIAEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIVKAAIDHLYEK
Sbjct: 121 EEAFMKIAEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIVKAAIDHLYEK 180
Query: 181 V 181
V
Sbjct: 181 V 181
>sp|O58988|KCY_PYRHO CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHATE KINASE) (CMP KINASE)
>gi|7451032|pir||F71071 probable cytidylate kinase -
Pyrococcus horikoshii >gi|3257685|dbj|BAA30368.1|
(AP000005) 192aa long hypothetical cytidylate kinase
[Pyrococcus horikoshii]
Length = 192
Score = 332 bits (841), Expect = 2e-90
Identities = 165/177 (93%), Positives = 171/177 (96%)
Query: 1 MPKGCLVITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAEL 60
MPK LVITVSGLAGSGTTTL + +A+HYG KHVYAGLIFRQMAKE+GMSLEEFQKYAEL
Sbjct: 1 MPKDKLVITVSGLAGSGTTTLSKKIAEHYGLKHVYAGLIFRQMAKEKGMSLEEFQKYAEL 60
Query: 61 HPEIDREVDRRQVEAAKECNVVIEGRLAGWMVKNADLKIWLDAPIRVRAERVAKREGISV 120
HPEIDREVDRRQ+EAAKE NVVIEGRLAGWMVKNADLKIWLDAPIRVRAERVAKREGISV
Sbjct: 61 HPEIDREVDRRQIEAAKEGNVVIEGRLAGWMVKNADLKIWLDAPIRVRAERVAKREGISV 120
Query: 121 EEAFMKIAEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIVKAAIDHL 177
EEAFMKIAEREMQNRKRYLNLYGIDINDLSIYDLII+TSKWSPEGVFAIVKAAIDHL
Sbjct: 121 EEAFMKIAEREMQNRKRYLNLYGIDINDLSIYDLIINTSKWSPEGVFAIVKAAIDHL 177
>sp|Q58071|KCY_METJA CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHATE KINASE) (CMP KINASE)
>gi|2127835|pir||H64381 cytidylate kinase (EC 2.7.4.14)
- Methanococcus jannaschii >gi|1591369|gb|AAB98651.1|
(U67513) cytidylate kinase (cmk) [Methanococcus
jannaschii]
Length = 178
Score = 215 bits (541), Expect = 3e-55
Identities = 105/176 (59%), Positives = 132/176 (74%), Gaps = 4/176 (2%)
Query: 6 LVITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAELHPEID 65
++IT+ GL G+GTTT+ + +A+ Y +HV AG IFR+MAKE GM L+EF KYAE H EID
Sbjct: 1 MIITIGGLPGTGTTTIAKMIAEKYNLRHVCAGFIFREMAKEMGMDLQEFSKYAEQHKEID 60
Query: 66 REVDRRQVEAAKECNVVIEGRLAGWM-VKNA---DLKIWLDAPIRVRAERVAKREGISVE 121
E+DRRQVE AK+ NVV+EGRLA WM +KN DL IW AP+ VRAER++KRE I +
Sbjct: 61 EEIDRRQVEIAKQGNVVLEGRLAAWMLLKNGIKPDLTIWFKAPLEVRAERISKRENIDKD 120
Query: 122 EAFMKIAEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIVKAAIDHL 177
A K+ ERE +KRY +Y ID++DLSIYDL+IDTSKW EGVF IV +AID+L
Sbjct: 121 VALKKMIEREASEKKRYKEIYNIDLDDLSIYDLVIDTSKWDVEGVFNIVSSAIDNL 176
>gi|11499484 cytidylate kinase (cmk) [Archaeoglobus fulgidus]
>gi|3913954|sp|O28379|KCY_ARCFU CYTIDYLATE KINASE (CK)
(CYTIDINE MONOPHOSPHATE KINASE) (CMP KINASE)
>gi|7451034|pir||C69487 cytidylate kinase (cmk) homolog
- Archaeoglobus fulgidus >gi|2648639|gb|AAB89349.1|
(AE000971) cytidylate kinase (cmk) [Archaeoglobus
fulgidus]
Length = 180
Score = 162 bits (406), Expect = 2e-39
Identities = 83/169 (49%), Positives = 117/169 (69%), Gaps = 1/169 (0%)
Query: 8 ITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAELHPEIDRE 67
IT+SG GSGTTT+ + +A+ G K + AG +FRQ+A ++GM++EEF +YAE +PEIDR
Sbjct: 3 ITISGPPGSGTTTVAKIVAEKLGLKLISAGDVFRQLAAKKGMTVEEFSQYAEENPEIDRL 62
Query: 68 VDRRQVEAA-KECNVVIEGRLAGWMVKNADLKIWLDAPIRVRAERVAKREGISVEEAFMK 126
+D+ Q E A KE NVV+EGRL+GW VKNADLK+W+ A VR R+AKREG + +
Sbjct: 63 IDQTQKEMAEKEKNVVVEGRLSGWFVKNADLKVWIFADPEVRYSRIAKREGKDLTVVRQE 122
Query: 127 IAEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIVKAAID 175
RE ++RY Y IDI++ +IYDLII++ + EGV I+ A++
Sbjct: 123 TRLREEFEKRRYWKFYSIDIDNWTIYDLIINSGSFDAEGVVEIILKAVE 171
>gb|AAG19965.1| (AE005078) cytidydylate kinase; Cmk [Halobacterium sp. NRC-1]
Length = 192
Score = 151 bits (377), Expect = 6e-36
Identities = 75/172 (43%), Positives = 115/172 (66%), Gaps = 2/172 (1%)
Query: 6 LVITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAELHPEID 65
+++T+SG GSG +T+ LA H ++H+ G IFR +A++R ++L EF + AE P+ID
Sbjct: 1 MLVTISGPPGSGKSTVASTLADHLSYEHISGGDIFRGLAEDRDLTLAEFNELAEEDPQID 60
Query: 66 REVDRRQVEAAK-ECNVVIEGRLAGWMV-KNADLKIWLDAPIRVRAERVAKREGISVEEA 123
+++DRR E A+ ++V+E RLAGWM + AD+KIWLDAP+ VRA R+A+RE + A
Sbjct: 61 KDLDRRLRETARGRDDIVLESRLAGWMAGEYADIKIWLDAPMSVRARRIAEREDKTPAAA 120
Query: 124 FMKIAEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIVKAAID 175
+ RE +RY Y ID +D++IYDL ++T++W P+ V IV A+D
Sbjct: 121 RAETEAREESETQRYEEYYAIDFDDITIYDLSVNTARWGPDAVTDIVLDAVD 172
>sp|O26138|KCY_METTH CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHATE KINASE) (CMP KINASE)
>gi|7451033|pir||C69138 cytidylate kinase -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621067|gb|AAB84539.1| (AE000796) cytidylate kinase
[Methanobacterium thermoautotrophicum]
Length = 161
Score = 137 bits (342), Expect = 7e-32
Identities = 71/160 (44%), Positives = 108/160 (67%), Gaps = 2/160 (1%)
Query: 6 LVITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAELHPEID 65
++IT+ GLAG+GTTT+ R L++ G V AG +FRQMA ER + + EF + AE +PEID
Sbjct: 1 MIITIGGLAGTGTTTVARILSERMGIPCVSAGDVFRQMAAERELDILEFSRIAEENPEID 60
Query: 66 REVDRRQVEAAKEC-NVVIEGRLAGWMVKNADLKIWLDAPIRVRAERVAKREGISVEEAF 124
E+DRRQ A E ++++EGRL+ + ADLK+ L AP VRA+R++ RE +E
Sbjct: 61 IEIDRRQARLADEHEDLILEGRLSAHFAR-ADLKVLLIAPFDVRAQRISVRESKDIETVR 119
Query: 125 MKIAEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPE 164
+I RE +RY ++GID++DL +YD++I+T+++ E
Sbjct: 120 EEIRIRERSEAQRYREIHGIDVDDLEVYDIVINTNRFDAE 159
>sp|Q9YDD5|KCY_AERPE CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHATE KINASE) (CMP KINASE)
>gi|7451036|pir||B72695 hypothetical protein APE0978 -
Aeropyrum pernix (strain K1) >gi|5104647|dbj|BAA79962.1|
(AP000060) 186aa long hypothetical protein [Aeropyrum
pernix]
Length = 186
Score = 134 bits (333), Expect = 8e-31
Identities = 64/165 (38%), Positives = 101/165 (60%), Gaps = 1/165 (0%)
Query: 7 VITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAELHPEIDR 66
V+ +SG GSG +T + LA+ G + G IFR +A+ERG+SL E + AE P ID
Sbjct: 13 VVVISGPPGSGKSTYAKRLAEDLGLSYYSTGTIFRSIARERGLSLAEMSRLAEEDPRIDL 72
Query: 67 EVDRRQVEAAKECNVVIEGRLAGWMVKN-ADLKIWLDAPIRVRAERVAKREGISVEEAFM 125
E+DRR ++ A VVI+ LA W++++ A + + AP+ VR R+A+R+G+ + A
Sbjct: 73 EIDRRTLDVASRGGVVIDSHLAAWLLRDKAQYLVLVKAPVWVRVRRIARRDGVPLRRALA 132
Query: 126 KIAEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIV 170
+ ERE R R+ YGID++D +I+ L +DTS +S E + ++
Sbjct: 133 ETVEREWSQRLRFKRYYGIDVSDTTIFHLTVDTSMYSVEDTYRLI 177
>sp|O05982|KCY_SULAC CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHATE KINASE) (CMP KINASE)
>gi|2076708|emb|CAA73486.1| (Y13049) cytidylate kinase
[Sulfolobus acidocaldarius]
Length = 190
Score = 133 bits (332), Expect = 1e-30
Identities = 72/169 (42%), Positives = 109/169 (63%), Gaps = 2/169 (1%)
Query: 8 ITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAELHPEIDRE 67
I +SG GSG +++ + L+ K+V AGLIFR +AK + + + K AE EID++
Sbjct: 3 IIISGPPGSGKSSVAKILSSKLSIKYVSAGLIFRDLAKRMNIDIVKLNKLAEDDFEIDKK 62
Query: 68 VDRRQVEAAK-ECNVVIEGRLAGWMVKN-ADLKIWLDAPIRVRAERVAKREGISVEEAFM 125
+D + K + NV+IE + GW+ N +DL I+L AP+ VRA+R+A R+ IS +EA +
Sbjct: 63 IDLEMFKLIKSQDNVIIESHIGGWLFHNLSDLSIYLRAPLDVRAKRIASRDHISEDEAII 122
Query: 126 KIAEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIVKAAI 174
+I +RE +R+R+L YGIDI DLS++DL+I+TS PE V I+ I
Sbjct: 123 QIIKRERSHRERFLRYYGIDILDLSVFDLVINTSYLLPEDVADIILGVI 171
>gb|AAK40992.1| Cytidylate kinase (cmK) [Sulfolobus solfataricus]
Length = 189
Score = 125 bits (311), Expect = 3e-28
Identities = 68/174 (39%), Positives = 109/174 (62%), Gaps = 5/174 (2%)
Query: 6 LVITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAELHPEID 65
++I +SG GSG T++ LA +K + AG IFR +A+ G+ + + AE + +ID
Sbjct: 1 MIIIISGPPGSGKTSVAIKLANELSYKFISAGKIFRDIAQSMGLDIINLNRVAESNFDID 60
Query: 66 REVDRRQVE-AAKECNVVIEGRLAGWMVKN-ADLKIWLDAPIRVRAERVAKREGISVEEA 123
+ VD++ E +E N+++E +AGW+ + D+ I+L AP+++RA R+A R+ IS EA
Sbjct: 61 KMVDKKIHEYVLRERNLIVESHIAGWIFREYTDVAIYLWAPLKIRANRIAIRDKISYVEA 120
Query: 124 FMKIAEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIVKAAIDHL 177
+I RE + KR+ YGIDINDLS++DL+I+TS + IVK +D+L
Sbjct: 121 VSQIIRREYMHYKRFNKFYGIDINDLSVFDLVINTSNID---INNIVKLILDYL 171
>sp|Q9UX81|KCY_SULSO CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHATE KINASE) (CMP KINASE)
>gi|6015784|emb|CAB57611.1| (Y18930) cytidylate kinase
[Sulfolobus solfataricus]
Length = 189
Score = 125 bits (311), Expect = 3e-28
Identities = 68/174 (39%), Positives = 109/174 (62%), Gaps = 5/174 (2%)
Query: 6 LVITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAELHPEID 65
++I +SG GSG T++ LA +K + AG IFR +A+ G+ + + AE + +ID
Sbjct: 1 MIIIISGPPGSGKTSVAIKLANELSYKFISAGKIFRDIAQSMGLDIINLNRVAESNFDID 60
Query: 66 REVDRRQVE-AAKECNVVIEGRLAGWMVKN-ADLKIWLDAPIRVRAERVAKREGISVEEA 123
+ VD++ E +E N+++E +AGW+ + D+ I+L AP+++RA R+A R+ IS EA
Sbjct: 61 KMVDKKIHEYVLRERNLIVESHIAGWIFREYTDVAIYLWAPLKIRANRIAIRDKISYVEA 120
Query: 124 FMKIAEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIVKAAIDHL 177
+I RE + KR+ YGIDINDLS++DL+I+TS + IVK +D+L
Sbjct: 121 VSQIIRREYMHYKRFNKFYGIDINDLSVFDLVINTSNID---INNIVKLILDYL 171
>emb|CAC12369.1| (AL445067) probable cytidylate kinase [Thermoplasma acidophilum]
Length = 188
Score = 116 bits (288), Expect = 2e-25
Identities = 65/178 (36%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
Query: 8 ITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAELHPEIDRE 67
IT++G GSG +T+ L++ G+ +G FR+ A++ MS+E+F Y+E HPE D
Sbjct: 3 ITIAGKIGSGKSTVSSELSRITGYTVYSSGTFFRETARKMNMSIEDFNVYSESHPEADYY 62
Query: 68 VDRRQVEAAK-ECNVVIEGRLAGWMVK----NADLKIWLDAPIRVRAERVAKREGISVEE 122
D Q + N+++EGRLAGW+ NA +I+L A R R A RE I ++
Sbjct: 63 TDETQKAFMQANDNIIVEGRLAGWISYLNGINA-FRIFLYATYYTRLVRFAGRENIDIDS 121
Query: 123 AFMKIAEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIVKAAIDHLYEK 180
A + +RE ++RY LYGID++DLSIYD++++T P + + ID + K
Sbjct: 122 ARDLMEKREKSEKERYRKLYGIDVDDLSIYDIVVNTEFMKPPEIAVYIANRIDEMSRK 179
>sp|O51759|KCY2_BORBU CYTIDYLATE KINASE 2 (CK 2) (CYTIDINE MONOPHOSPHATE KINASE 2) (CMP
KINASE 2) >gi|7451038|pir||B70202 cytidylate kinase
(cmk-2) homolog - Lyme disease spirochete
>gi|2688759|gb|AAC67164.1| (AE001180) cytidylate kinase
(cmk-2) [Borrelia burgdorferi]
Length = 180
Score = 104 bits (256), Expect = 9e-22
Identities = 62/172 (36%), Positives = 96/172 (55%), Gaps = 6/172 (3%)
Query: 8 ITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAELHPEI--- 64
I +SG +G G TT+ +AKHYG + + F +A+E + EF + +
Sbjct: 3 IALSGKSGCGNTTVSGMIAKHYGLEFI--NYTFHDIAREHNIPFSEFYEKEIIGRNDYYW 60
Query: 65 DREVDRRQVEAAKECNVVIEGRLAGWMVKNADLKIWLDAPIRVRAERVAKREGISVEEAF 124
D+ +D R +++ N V+ RLA W+ K+ADLKI+L A + VRAER+ REG +
Sbjct: 61 DKYLDNRLSVLSRKNNTVLASRLAIWISKSADLKIYLYAKMEVRAERIMTREGGMYSDVL 120
Query: 125 MKIAEREMQNRKRYLNLYGIDIND-LSIYDLIIDTSKWSPEGVFAIVKAAID 175
R+ ++KRYL +Y IDI+D S DL+ID + +P VF +++ ID
Sbjct: 121 SSTFIRDENDKKRYLAIYNIDIDDYFSETDLVIDVTNINPNEVFELIRDEID 172
>pir||E71335 probable cytidylate kinase (cmk) - syphilis spirochete
>gi|3322621|gb|AAC65330.1| (AE001214) cytidylate kinase
(cmk) [Treponema pallidum]
Length = 186
Score = 99.8 bits (245), Expect = 2e-20
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 2/163 (1%)
Query: 8 ITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAELHPEIDRE 67
I VSG +G G TT+ LA+ G V FR +A+E G+SL E + A D+
Sbjct: 15 IAVSGASGCGNTTVSALLAERLGLPLV--NYTFRNIARELGISLSEVLERARTDNHFDKA 72
Query: 68 VDRRQVEAAKECNVVIEGRLAGWMVKNADLKIWLDAPIRVRAERVAKREGISVEEAFMKI 127
VD RQ+ A + V+ RLA W+VK+A LK++L A ++ R +RV +REG V++
Sbjct: 73 VDARQLCLAMRSSCVVGSRLAIWLVKDAALKVYLLASLKERVKRVLQREGGDVQDVERFT 132
Query: 128 AEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIV 170
+ R+ ++ RY LY ID + S DL+++T E V +I+
Sbjct: 133 SMRDAEDMSRYKKLYRIDNTNYSFADLVLNTEGCDQETVVSII 175
>sp|O83362|KCY_TREPA CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHATE KINASE) (CMP KINASE)
Length = 174
Score = 99.8 bits (245), Expect = 2e-20
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 2/163 (1%)
Query: 8 ITVSGLAGSGTTTLCRNLAKHYGFKHVYAGLIFRQMAKERGMSLEEFQKYAELHPEIDRE 67
I VSG +G G TT+ LA+ G V FR +A+E G+SL E + A D+
Sbjct: 3 IAVSGASGCGNTTVSALLAERLGLPLV--NYTFRNIARELGISLSEVLERARTDNHFDKA 60
Query: 68 VDRRQVEAAKECNVVIEGRLAGWMVKNADLKIWLDAPIRVRAERVAKREGISVEEAFMKI 127
VD RQ+ A + V+ RLA W+VK+A LK++L A ++ R +RV +REG V++
Sbjct: 61 VDARQLCLAMRSSCVVGSRLAIWLVKDAALKVYLLASLKERVKRVLQREGGDVQDVERFT 120
Query: 128 AEREMQNRKRYLNLYGIDINDLSIYDLIIDTSKWSPEGVFAIV 170
+ R+ ++ RY LY ID + S DL+++T E V +I+
Sbjct: 121 SMRDAEDMSRYKKLYRIDNTNYSFADLVLNTEGCDQETVVSII 163
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.138 0.404
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63326560
Number of Sequences: 2977
Number of extensions: 2381530
Number of successful extensions: 9479
Number of sequences better than 1.0e-10: 14
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9449
Number of HSP's gapped (non-prelim): 14
length of query: 181
length of database: 189,106,746
effective HSP length: 53
effective length of query: 128
effective length of database: 157,386,935
effective search space: 20145527680
effective search space used: 20145527680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 162 (67.5 bits)