BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0773 (PAB0773) DE:PUTATIVE ACETYLtransferase
(205 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75096 probable acetyltransferase PAB0773 - Pyrococcus abys... 435 e-121
pir||S70673 acetyl transferase homolog - Bordetella pertussis >g... 175 5e-43
pir||F83251 probable acetyltransferase WbpD PA3156 [imported] - ... 173 2e-42
gb|AAC45855.1| (U50396) WbpD [Pseudomonas aeruginosa] 167 9e-41
gb|AAB81631.1| (AF025396) putative acetyl transferase [Vibrio an... 152 3e-36
pir||E72335 hypothetical protein TM0759 - Thermotoga maritima (s... 94 1e-18
pir||D69134 conserved hypothetical protein MTH272 - Methanobacte... 92 4e-18
gb|AAD56747.1|AF125164_20 (AF125164) putative acetyltransferase ... 80 3e-14
pir||H72245 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinylt... 73 4e-12
dbj|BAB03334.1| (AB035451) hypothetical protein [Staphylococcus ... 73 4e-12
pir||C81967 probable acetyltransferase NMA0494 [imported] - Neis... 69 5e-11
>pir||C75096 probable acetyltransferase PAB0773 - Pyrococcus abyssi (strain
Orsay) >gi|5458584|emb|CAB50072.1| (AJ248286) PUTATIVE
ACETYLtransferase [Pyrococcus abyssi]
Length = 205
Score = 435 bits (1107), Expect = e-121
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MPDLKKYFVHPTAVVEEGAEIGEGTRIWHFAHIRSGAKVGKNCNIGKDVYIDVGVEIGNN 60
MPDLKKYFVHPTAVVEEGAEIGEGTRIWHFAHIRSGAKVGKNCNIGKDVYIDVGVEIGNN
Sbjct: 1 MPDLKKYFVHPTAVVEEGAEIGEGTRIWHFAHIRSGAKVGKNCNIGKDVYIDVGVEIGNN 60
Query: 61 VKIQNGVSVYRGVKIEDDVFLGPHMTFTNDLYPRSFNEDWEIVPTLVKKGASIGANATIV 120
VKIQNGVSVYRGVKIEDDVFLGPHMTFTNDLYPRSFNEDWEIVPTLVKKGASIGANATIV
Sbjct: 61 VKIQNGVSVYRGVKIEDDVFLGPHMTFTNDLYPRSFNEDWEIVPTLVKKGASIGANATIV 120
Query: 121 CGVTIGEYAMVGAGSVVTKDVPPFGLVYGNPARLRGFVCYCGRPLKDIVGEDEDHVIFKC 180
CGVTIGEYAMVGAGSVVTKDVPPFGLVYGNPARLRGFVCYCGRPLKDIVGEDEDHVIFKC
Sbjct: 121 CGVTIGEYAMVGAGSVVTKDVPPFGLVYGNPARLRGFVCYCGRPLKDIVGEDEDHVIFKC 180
Query: 181 SHCGREVKIKKKDYERYLKEKDLRC 205
SHCGREVKIKKKDYERYLKEKDLRC
Sbjct: 181 SHCGREVKIKKKDYERYLKEKDLRC 205
>pir||S70673 acetyl transferase homolog - Bordetella pertussis
>gi|992972|emb|CAA62246.1| (X90711) gene referred to as
bplB in Mol. Microbiol. 19:37-52(1996) [Bordetella
pertussis] >gi|3451514|emb|CAA07670.1| (AJ007747)
putative acetyltransferase [Bordetella bronchiseptica]
>gi|1589222|prf||2210367D bplB gene [Bordetella
pertussis]
Length = 191
Score = 175 bits (438), Expect = 5e-43
Identities = 90/178 (50%), Positives = 117/178 (65%), Gaps = 6/178 (3%)
Query: 9 VHPTAVVEEGAEIGEGTRIWHFAHIRSGAKVGKNCNIGKDVYIDVGVEIGNNVKIQNGVS 68
+HPTA+V+EGA IG +RIWH+ HI GA++G C++G++V++ V IG+ VKIQN VS
Sbjct: 4 IHPTAIVDEGARIGANSRIWHWVHICGGAEIGAGCSLGQNVFVGNRVRIGDRVKIQNNVS 63
Query: 69 VYRGVKIEDDVFLGPHMTFTNDLYPR-SFNEDWEIVPTLVKKGASIGANATIVCGVTIGE 127
VY V +EDDVF GP M FTN PR + E TLV++GA++GAN TIVCG T+G
Sbjct: 64 VYDNVFLEDDVFCGPSMVFTNVYNPRAAIERKNEYRDTLVRQGATLGANCTIVCGATVGR 123
Query: 128 YAMVGAGSVVTKDVPPFGLVYGNPARLRGFVCYCGRPLK-DIVGEDEDHVIFKCSHCG 184
YA VGAG+VV KDVP F LV G PAR G++ G L + G + +C H G
Sbjct: 124 YAFVGAGAVVNKDVPDFALVVGVPARQIGWMSRHGEQLDLPLAGNGQ----ARCPHTG 177
>pir||F83251 probable acetyltransferase WbpD PA3156 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949271|gb|AAG06544.1|AE004739_6 (AE004739) probable
acetyltransferase WbpD [Pseudomonas aeruginosa]
Length = 191
Score = 173 bits (433), Expect = 2e-42
Identities = 90/187 (48%), Positives = 124/187 (66%), Gaps = 6/187 (3%)
Query: 7 YFVHPTAVVEEGAEIGEGTRIWHFAHIRSGAKVGKNCNIGKDVYIDVGVEIGNNVKIQNG 66
Y+ HP+A+V++GA+IG +R+WHF HI +GA++G ++G++V++ V IG+ KIQN
Sbjct: 3 YYQHPSAIVDDGAQIGSDSRVWHFVHICAGARIGAGVSLGQNVFVGNKVVIGDRCKIQNN 62
Query: 67 VSVYRGVKIEDDVFLGPHMTFTNDLYPRSFNE-DWEIVPTLVKKGASIGANATIVCGVTI 125
VSVY V +E+ VF GP M FTN PRS E + TLVKKGA++GAN TIVCGVTI
Sbjct: 63 VSVYDNVTLEEGVFCGPSMVFTNVYNPRSLIERKDQYRNTLVKKGATLGANCTIVCGVTI 122
Query: 126 GEYAMVGAGSVVTKDVPPFGLVYGNPARLRGFVCYCGRPLKDIVGEDEDHVIFKCSHCGR 185
GEYA VGAG+V+ K+VP + L+ G PAR G++ G L+ + E + V CSH G
Sbjct: 123 GEYAFVGAGAVINKNVPSYALMVGVPARQIGWMSEFGEQLQ--LNEQGEAV---CSHSGA 177
Query: 186 EVKIKKK 192
+ K
Sbjct: 178 RYVLNGK 184
>gb|AAC45855.1| (U50396) WbpD [Pseudomonas aeruginosa]
Length = 163
Score = 167 bits (419), Expect = 9e-41
Identities = 80/153 (52%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 7 YFVHPTAVVEEGAEIGEGTRIWHFAHIRSGAKVGKNCNIGKDVYIDVGVEIGNNVKIQNG 66
Y+ HP+A+V++GA+IG +R+WHF HI +GA++G ++G++V++ V IG+ KIQN
Sbjct: 3 YYQHPSAIVDDGAQIGSDSRVWHFVHICAGARIGAGVSLGQNVFVGNKVVIGDRCKIQNN 62
Query: 67 VSVYRGVKIEDDVFLGPHMTFTNDLYPRSFNE-DWEIVPTLVKKGASIGANATIVCGVTI 125
VSVY V +E+ VF GP M FTN PRS E + TLVKKGA++GAN TIVCGVTI
Sbjct: 63 VSVYDNVTLEEGVFCGPSMVFTNVYNPRSLIERKDQYRNTLVKKGATLGANCTIVCGVTI 122
Query: 126 GEYAMVGAGSVVTKDVPPFGLVYGNPARLRGFV 158
GEYA +GAG+V+ K+VP + L+ G PAR G++
Sbjct: 123 GEYAFLGAGAVINKNVPSYALMVGVPARQIGWI 155
>gb|AAB81631.1| (AF025396) putative acetyl transferase [Vibrio anguillarum]
Length = 151
Score = 152 bits (380), Expect = 3e-36
Identities = 79/146 (54%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
Query: 8 FVHPTAVVEEGAEIGEGTRIWHFAHIRSGAKVGKNCNIGKDVYIDVGVEIGNNVKIQNGV 67
F+H A V+ + IG T+IW F+ + A +GKNCNI +I+ V IGNNV I+ GV
Sbjct: 3 FIHELADVQS-SNIGINTKIWQFSVVLPNAIIGKNCNICSHTFIENDVTIGNNVTIKCGV 61
Query: 68 SVYRGVKIEDDVFLGPHMTFTNDLYPRSFNEDWEIVPTLVKKGASIGANATIVCGVTIGE 127
++ G+ I ++VF+GP+ TFTND+YPRS E + T+V ASIGAN TI+ GVTIGE
Sbjct: 62 QIWDGILIGNNVFIGPNATFTNDMYPRSKQYPDEFMKTVVCDNASIGANTTILPGVTIGE 121
Query: 128 YAMVGAGSVVTKDVPPFGLVYGNPAR 153
A+VGAGSVVTKDV PF +V GNPAR
Sbjct: 122 GALVGAGSVVTKDVKPFTIVAGNPAR 147
>pir||E72335 hypothetical protein TM0759 - Thermotoga maritima (strain MSB8)
>gi|4981287|gb|AAD35841.1|AE001746_2 (AE001746)
acyltransferase, putative [Thermotoga maritima]
Length = 254
Score = 94.4 bits (231), Expect = 1e-18
Identities = 60/143 (41%), Positives = 80/143 (54%), Gaps = 3/143 (2%)
Query: 14 VVEEGAEIGEGTRIWHFAHIRSGAKVGKNCNIGKDVYIDVGVEIGNNVKIQNGVSVYRGV 73
V+ G+ + + + IR K+G IGK V ++ IG VKI+ +
Sbjct: 92 VIYRGSVLEDFVFVGDLVVIREDVKIGPYTVIGKGVTVENRTTIGRYVKIETNAYITALS 151
Query: 74 KIEDDVFLGPHMTFTNDLYPRSFNEDWEIV--PTLVKKGASIGANATIVCGVTIGEYAMV 131
IED F+ P +TFTND + E + PTL KKGA IGANATI+ GV +GE A+V
Sbjct: 152 TIEDYCFIAPEVTFTNDNFLGRTEERKKFFKGPTL-KKGARIGANATILPGVVVGEDALV 210
Query: 132 GAGSVVTKDVPPFGLVYGNPARL 154
AGSVVT+DVP +V G PAR+
Sbjct: 211 AAGSVVTRDVPDRKIVMGIPARV 233
>pir||D69134 conserved hypothetical protein MTH272 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621323|gb|AAB84778.1| (AE000813) acetyl / acyl
transferase related protein [Methanobacterium
thermoautotrophicum]
Length = 205
Score = 92.4 bits (226), Expect = 4e-18
Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 5 KKYFVHPTAVVEEGAEIGEGTRIWHFAHIRSGAKVGKNCNIGKDVYIDVGVEIGNNVKIQ 64
K + V+ IG+ R H IR +G + IG + I+ +IG+NV IQ
Sbjct: 46 KNPLLRSNTVIYNDVTIGDNLRTGHNVLIREKTTIGDDVLIGTNTVIEGHSKIGSNVSIQ 105
Query: 65 NGVSVYRGVKIEDDVFLGPHMTFTNDLYPRSFNEDWEIVPTLVKKGASIGANATIVCGVT 124
+ V + + IED+VF+GP FTND YP +++ ++++GASIGAN+T + +
Sbjct: 106 SNVYLPKNSYIEDNVFIGPCACFTNDRYP--IRVKYKLRGPIIRQGASIGANSTFLSRIE 163
Query: 125 IGEYAMVGAGSVVTKDV 141
+GE AMV AG+VVT++V
Sbjct: 164 VGEGAMVAAGAVVTRNV 180
>gb|AAD56747.1|AF125164_20 (AF125164) putative acetyltransferase [Bacteroides fragilis]
Length = 194
Score = 79.6 bits (193), Expect = 3e-14
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 32/146 (21%)
Query: 9 VHPTAVVEEGAEIGEGTRIWHFAHIRSGAKVGKNCNIGKDVYIDVGVEIGNNVKIQNGVS 68
+HP ++V E A+IGEG+ + + I+ A+VG++C I G S
Sbjct: 77 IHPLSIVSELADIGEGSVVMQGSIIQVCAQVGRHCIIN------------------TGAS 118
Query: 69 VYRGVKIEDDVFLGPHMTFTNDLYPRSFNEDWEIVPTLVKKGASIGANATIVCGVTIGEY 128
V IED V + PH T ++ LV +G+ IGA TI+ GV IG++
Sbjct: 119 VDHECVIEDYVHISPHSTLCGNV--------------LVGEGSWIGAGTTIIPGVKIGKW 164
Query: 129 AMVGAGSVVTKDVPPFGLVYGNPARL 154
+++GAGSVVTKD+P L GN ++
Sbjct: 165 SVIGAGSVVTKDIPDHVLAVGNKCKI 190
>pir||H72245 2,3,4,5-tetrahydropyridine-2-carboxylate
N-succinyltransferase-related protein - Thermotoga
maritima (strain MSB8)
>gi|4982085|gb|AAD36586.1|AE001799_18 (AE001799)
2,3,4,5-tetrahydropyridine-2-carboxylate
N-succinyltransferase-related protein [Thermotoga
maritima]
Length = 236
Score = 72.6 bits (175), Expect = 4e-12
Identities = 51/156 (32%), Positives = 74/156 (46%), Gaps = 26/156 (16%)
Query: 1 MPDLKKYF--VHPTAVVEEGAEIGEGTRIWHFAHIRSGAKVGKNCNIGKDVYIDVGVEIG 58
+ DL KY + P A++ + EIGEG A I GA + IG+ ID+ +G
Sbjct: 83 LADLTKYKARIEPGAIIRDMVEIGEG------AVIMMGAVINVGAVIGEGTMIDMNAVVG 136
Query: 59 NNVKIQNGVSVYRGVKIEDDVFLGPHMTFTNDLYPRSFNEDWEIVPTLVKKGASIGANAT 118
I + G I + E P +++ +GANA
Sbjct: 137 GRAIIGKKCHIGAGAVIAGVI------------------EPPSAKPVVIEDEVLVGANAV 178
Query: 119 IVCGVTIGEYAMVGAGSVVTKDVPPFGLVYGNPARL 154
I+ GVT+G+ A+V AG+VVTKDVPP+ +V G PAR+
Sbjct: 179 ILEGVTVGKGAVVAAGAVVTKDVPPYTVVAGVPARV 214
>dbj|BAB03334.1| (AB035451) hypothetical protein [Staphylococcus aureus]
Length = 199
Score = 72.6 bits (175), Expect = 4e-12
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 14/119 (11%)
Query: 40 GKNCNIGKDVYIDVGVEIGNNVKIQNGVSVYRGVKIEDDVFLGPHMTFTNDLYPRSF--- 96
G N +GK+VY++ N +G + G D+VF+GP+ F +P +F
Sbjct: 72 GWNVKLGKNVYVNT------NCYFMDGGQITIG----DNVFIGPNCGFYTATHPLNFYHR 121
Query: 97 NEDWEIV-PTLVKKGASIGANATIVCGVTIGEYAMVGAGSVVTKDVPPFGLVYGNPARL 154
NE +E P + G + ++ GVTIGE +++GAGSVVTKD+PP L GNP ++
Sbjct: 122 NEGYEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKV 180
>pir||C81967 probable acetyltransferase NMA0494 [imported] - Neisseria
meningitidis (group A strain Z2491)
>gi|7379238|emb|CAB83787.1| (AL162753) putative
acetyltransferase [Neisseria meningitidis Z2491]
Length = 170
Score = 68.7 bits (165), Expect = 5e-11
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 24 GTRIWHFAHIRSGAKVGKNCNIGKDVYIDVGVEIGNNVKIQNGVSVYRGVKIEDDVFLGP 83
G R+ F R +G+ NI + Y+ +G+ I + RG + +V + P
Sbjct: 28 GRRVRGFLARRVSPHIGRGVNIERGAYVFPDTVLGDGSGIGANCEICRGPVVGKNVMMEP 87
Query: 84 HMTF--TNDLYPRS---FNEDWEIVPTLVKKGASIGANATIVCGVTIGEYAMVGAGSVVT 138
TN + R F EI P ++ G ++ GVT+G ++VGAG+VVT
Sbjct: 88 ECLLYSTNHKFDRENKRFEGYTEIRPITLEDDVWPGRRVIVMAGVTVGRGSVVGAGAVVT 147
Query: 139 KDVPPFGLVYGNPA 152
KD+PP+ L GNPA
Sbjct: 148 KDIPPYSLAAGNPA 161
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.143 0.445
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86077530
Number of Sequences: 2977
Number of extensions: 3966039
Number of successful extensions: 9547
Number of sequences better than 1.0e-10: 11
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9465
Number of HSP's gapped (non-prelim): 23
length of query: 205
length of database: 189,106,746
effective HSP length: 49
effective length of query: 156
effective length of database: 159,780,883
effective search space: 24925817748
effective search space used: 24925817748
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 163 (67.9 bits)