BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0774 (aspB-like1) DE:aspartate aminotransferase (aspB-like1)
(366 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75096 aspartate aminotransferase (aspb-like1) PAB0774 - Py... 738 0.0
pir||D69025 pleiotropic regulatory protein DegT - Methanobacteri... 414 e-114
sp|P15263|DEGT_BACST PLEIOTROPIC REGULATORY PROTEIN >gi|2126851|... 307 1e-82
sp|Q58466|YA66_METJA HYPOTHETICAL PROTEIN MJ1066 >gi|2129289|pir... 299 4e-80
sp|P39623|SPSC_BACSU SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROT... 293 3e-78
pir||S75490 probable hydro-lyase (EC 4.2.1.-) slr2114 - Synechoc... 277 2e-73
pir||A72350 pleiotropic regulatory protein - Thermotoga maritima... 271 8e-72
gb|AAC68680.1| (AF079762) transaminase [Streptomyces venezuelae] 266 4e-70
pir||H69142 perosamine synthetase - Methanobacterium thermoautot... 264 1e-69
sp|P14290|ERBS_SACER ERYTHROMYCIN BIOSYNTHESIS SENSORY TRANSDUCT... 261 7e-69
pir||S76874 probable hydro-lyase (EC 4.2.1.-) - Synechocystis sp... 260 2e-68
pir||T51111 aminotransferase [imported] - Streptomyces antibioti... 258 6e-68
gb|AAC38670.2| (AF062345) putative perosamine synthetase; LpsC [... 257 1e-67
gb|AAF59939.1| (AF237895) aminotransferase-like protein [Strepto... 256 2e-67
pir||S28471 probable hydro-lyase (EC 4.2.1.-) perosamine synthet... 256 3e-67
emb|CAA68523.1| (Y00459) aminotransferase [Streptomyces griseus] 255 5e-67
pir||C82346 perosamine synthase VC0244 [imported] - Vibrio chole... 255 5e-67
gb|AAB50842.1| (S83460) perosamine synthetase homolog=rfbE(EcO15... 255 7e-67
gb|AAC32343.1| (AF061251) perosamine synthetase Per [Escherichia... 255 7e-67
dbj|BAA31964.1| (D64132) A porR mutant of Pophyromonas gingivali... 252 5e-66
gb|AAD52182.1|AF144879_21 (AF144879) unknown [Leptospira interro... 250 2e-65
emb|CAA07383.1| (AJ006985) StrS [Streptomyces glaucescens] 247 2e-64
gb|AAD45657.1|AF126256_2 (AF126256) FlmB [Aeromonas caviae] 244 1e-63
gb|AAD12965.1| (AF078135) unknown [Leptospira borgpetersenii] 242 5e-63
pir||B81396 probable aminotransferase (degT family) Cj0505c [imp... 240 2e-62
pir||H81983 pilin glycosylation protein NMA0638 [imported] - Nei... 240 2e-62
emb|CAA07666.1| (AJ007747) putative amino-sugar biosynthesis pro... 239 3e-62
pir||F81039 pilin glycosylation protein PglC NMB1821 [imported] ... 239 4e-62
gb|AAD28515.1|AF126354_1 (AF126354) BlmS [Streptomyces bluensis] 239 4e-62
sp|P77690|YFBE_ECOLI HYPOTHETICAL 42.9 KD PROTEIN IN AIS-PMRD IN... 236 2e-61
emb|CAB62151.1| (AJ245666) putative polysaccharide biosynthesis ... 236 2e-61
pir||S70677 probable hydro-lyase (EC 4.2.1.-) bplF protein - Bor... 236 4e-61
gb|AAB81632.1| (AF025396) putative amino transferase [Vibrio ang... 235 5e-61
gb|AAG17414.1|AF285970_8 (AF285970) WbgX [Plesiomonas shigelloides] 235 7e-61
gb|AAC98613.1| (AF047478) perosamine synthetase; Per [Brucella m... 235 9e-61
dbj|BAA85067.1| (AB028134) ORF7S [Shigella sonnei] >gi|10442672|... 234 1e-60
pir||T44515 hydro-lyase bplF protein homolog [imported] - Plesio... 233 3e-60
pir||G72359 hypothetical protein TM0572 - Thermotoga maritima (s... 231 1e-59
pir||E83251 probable aminotransferase WbpE PA3155 [imported] - P... 231 1e-59
pir||T30592 conserved hypothetical protein PCZA361.5 - Amycolato... 228 6e-59
pir||C83201 conserved hypothetical protein PA3552 [imported] - P... 228 1e-58
emb|CAA07669.1| (AJ007747) putative amino-sugar biosynthesis pro... 226 3e-58
pir||S70674 probable hydro-lyase (EC 4.2.1.-) bplC protein - Bor... 226 4e-58
pir||G70448 transcription regulator DegT/DnrJ/Eryc1 family - Aqu... 225 7e-58
gb|AAG13910.1|AF263245_6 (AF263245) TDP-3-keto-6-deoxyhexose 3-a... 225 7e-58
pir||S44965 probable hydro-lyase (EC 4.2.1.-) lmbS - Streptomyce... 223 3e-57
sp|P25048|DNRJ_STRPE DAUNORUBICIN BIOSYNTHESIS SENSORY TRANSDUCT... 222 4e-57
pir||B43306 probable hydro-lyase (EC 4.2.1.-) dnrJ - Streptomyce... 222 4e-57
pir||S49052 probable hydro-lyase (EC 4.2.1.-) tylB - Streptomyce... 222 6e-57
pir||T44839 probable amino-transferase [imported] - Acinetobacte... 221 8e-57
gb|AAF73462.1|AF264025_13 (AF264025) putative aminotransferase; ... 218 7e-56
gb|AAB81626.1| (AF025396) probable perosamine synthetase [Vibrio... 218 9e-56
gb|AAC62518.1| (U27301) FLAA2 protein [Caulobacter crescentus] 217 1e-55
gb|AAC04770.1| (AF036677) unknown [Salmonella typhimurium] 217 1e-55
gb|AAF01821.1|AF187532_17 (AF187532) putative aminotransferase [... 217 2e-55
gb|AAD56740.1|AF125164_13 (AF125164) putative aminotransferase [... 208 8e-53
pir||C81272 probable aminotransferase (degT family) Cj1294 [impo... 200 2e-50
sp|P26398|RFBH_SALTY LIPOPOLYSACCHARIDE BIOSYNTHESIS PROTEIN RFB... 198 7e-50
emb|CAA90935.1| (Z54208) aminohydroxybenzoate synthase [Streptom... 198 1e-49
pir||I39657 3-amino-5-hydroxybenzoic acid synthase (EC 4.2.1.-) ... 196 3e-49
gb|AAF71772.1|AF263912_11 (AF263912) NysDII [Streptomyces noursei] 196 3e-49
gb|AAD27811.1|AF115779_1 (AF115779) 3-amino-5-hydroxybenzoic aci... 196 5e-49
gb|AAD45549.1|U70376_14 (U70376) SpcE [Streptomyces flavopersicus] 194 2e-48
gb|AAF72550.1|AF269227_2 (AF269227) NDP-hexose 3,4-dehydratase U... 193 2e-48
pir||E47070 CDP-4-keto-6-deoxy-D-glucose-3-dehydrase - Yersinia ... 193 3e-48
emb|CAB63273.1| (AJ251713) CDP-4-keto-6-deoxy-D-glucose-3-dehydr... 192 5e-48
gb|AAA88701.1| (L33181) CDP-6-deoxy-L-threo-D-glycero-4-hexulose... 191 1e-47
gb|AAC45856.1| (U50396) WbpE [Pseudomonas aeruginosa] 190 3e-47
gb|AAB81623.1| (AF025396) DdhC [Vibrio anguillarum] 190 3e-47
pdb|1B9H|A Chain A, Crystal Structure Of 3-Amino-5-Hydroxybenzoi... 189 5e-47
pdb|1B9I|A Chain A, Crystal Structure Of 3-Amino-5-Hydroxybenzoi... 189 5e-47
gb|AAC01720.1| (AF040570) 3-amino-5-hydroxybenzoic acid synthase... 188 8e-47
emb|CAA75797.1| (Y15812) L-Lysine 2-aminotransferase [Streptomyc... 188 1e-46
pir||I39599 3-amino-5-hydroxybenzoic acid synthase (EC 4.2.1.-) ... 187 2e-46
pir||E71369 probable spore coat polysaccharide biosynthesis prot... 186 4e-46
gb|AAD31828.1| (AF131877) aminohydroxybenzoic acid synthase [Str... 185 5e-46
pir||C71861 probable sugar nucleotide biosynthesis - Helicobacte... 184 2e-45
gb|AAF73452.1|AF264025_3 (AF264025) putative 3-dehydratase; AknP... 183 2e-45
pir||C69834 sensory transduction pleiotropic regulator homolog y... 183 3e-45
gb|AAB84075.1| (U77459) EryCIV [Saccharopolyspora erythraea] >gi... 182 4e-45
pir||S74758 probable hydro-lyase (EC 4.2.1.-) slr1615 - Synechoc... 181 1e-44
gb|AAD28492.1|AF145039_4 (AF145039) aminotransferase spcS2 [Stre... 181 1e-44
pir||T46528 probable CDP-4-keto-6-deoxyglucose-3-dehydratase (E1... 180 3e-44
pir||F64565 spore coat polysaccharide biosynthesis protein C - H... 178 7e-44
gb|AAD13547.1| (AF080235) NDP-hexose 3,4-dehydratase homolog [St... 177 1e-43
gb|AAF18954.1|AF164515_3 (AF164515) Cps7G [Streptococcus suis] 173 2e-42
gb|AAD56748.1|AF125164_21 (AF125164) putative aminotransferase [... 172 7e-42
gb|AAC01730.1| (AF040570) dNTP-hexose dehydratase [Amycolatopsis... 169 3e-41
pir||F70037 spore coat polysaccharide biosynthesis homolog yvfE ... 169 4e-41
gb|AAF33462.1| (AF233324) 92% identity with E. coli lipopolysacc... 168 1e-40
gb|AAC68684.1| (AF079762) 4-dehydrase [Streptomyces venezuelae] 167 2e-40
pir||T51108 dehydratase [imported] - Streptomyces antibioticus (... 165 6e-40
emb|CAA70012.1| (Y08763) L-glutamine:scyllo-inosose aminotransfe... 163 3e-39
gb|AAF59937.1| (AF237895) 3,4-dehydratase-like protein [Streptom... 163 3e-39
sp|P27833|RFFA_ECOLI LIPOPOLYSACCHARIDE BIOSYNTHESIS PROTEIN RFF... 160 2e-38
emb|CAA72359.1| (Y11648) wlaK [Campylobacter jejuni] 157 1e-37
gb|AAD09298.1| (AF001497) aminotransferase homolog [Campylobacte... 157 1e-37
gb|AAD51387.1|AF108897_5 (AF108897) PglE [Campylobacter jejuni] 157 1e-37
emb|CAA69113.1| (Y07786) ORF43x9 [Vibrio cholerae] >gi|3724308|d... 157 2e-37
gb|AAD09304.1| (AF001498) aminotransferase homolog [Campylobacte... 156 3e-37
pir||D81316 probable aminotransferase (degT family) Cj1121c [imp... 156 3e-37
pir||T44324 hypothetical protein wbfI [imported] - Vibrio choler... 154 1e-36
pir||S30685 hypothetical protein o299 - Escherichia coli >gi|148... 153 4e-36
emb|CAA70010.1| (Y08763) L-alanine:N-amidino-3-keto-scyllo- inos... 153 4e-36
gb|AAC44885.1| (AF078736) WbdK [Escherichia coli] >gi|1584632|pr... 149 4e-35
gb|AAD44154.1|AF125322_5 (AF125322) VioA [Escherichia coli] 149 5e-35
pir||S77445 3-amino-5-hydroxybenzoic acid synthase - Synechocyst... 147 2e-34
pir||E81275 probable aminotransferase (degT family) Cj1320 [impo... 147 2e-34
gb|AAG35231.1| (AF176369) putative pyridoxamine 5-phosphate-depe... 144 1e-33
sp|Q07608|MOSB_RHIME MOSB PROTEIN >gi|1073155|pir||C53308 probab... 141 9e-33
gb|AAA91313.1| (U23753) MosB [Sinorhizobium meliloti] 141 9e-33
pir||S69805 lmbS protein - Streptomyces lincolnensis (fragment) 134 1e-30
pir||C70713 hypothetical protein Rv1504c - Mycobacterium tubercu... 133 3e-30
gb|AAF68683.1| (AF216815) unknown [Azospirillum brasilense] 133 3e-30
emb|CAA63162.1| (X92429) Amino-transferase [Streptomyces anulatus] 132 5e-30
pir||S20013 pleiotropic regulatory protein PRG1 - Streptomyces a... 127 2e-28
gb|AAA84877.1| (U34305) ORF9; Method: conceptual translation su... 115 7e-25
gb|AAA84876.1| (U34305) ORF8; Method: conceptual translation su... 113 3e-24
emb|CAB65209.1| (AJ007311) hypothetical protein [Legionella pneu... 113 4e-24
sp|Q50723|YY02_MYCTU HYPOTHETICAL 44.9 KDA PROTEIN RV3402C >gi|7... 109 5e-23
pir||T35679 hypothetical protein SC7C7.01 SC7C7.01 - Streptomyce... 81 2e-14
>pir||D75096 aspartate aminotransferase (aspb-like1) PAB0774 - Pyrococcus abyssi
(strain Orsay) >gi|5458585|emb|CAB50073.1| (AJ248286)
aspartate aminotransferase (aspB-like1) [Pyrococcus
abyssi]
Length = 366
Score = 738 bits (1885), Expect = 0.0
Identities = 366/366 (100%), Positives = 366/366 (100%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
MIPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV
Sbjct: 1 MIPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK
Sbjct: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
Query: 121 AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTK 180
AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTK
Sbjct: 121 AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTK 180
Query: 181 NMTTGEGGMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLD 240
NMTTGEGGMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLD
Sbjct: 181 NMTTGEGGMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLD 240
Query: 241 KWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRN 300
KWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRN
Sbjct: 241 KWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRN 300
Query: 301 RGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTL 360
RGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTL
Sbjct: 301 RGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTL 360
Query: 361 EELGGE 366
EELGGE
Sbjct: 361 EELGGE 366
>pir||D69025 pleiotropic regulatory protein DegT - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622296|gb|AAB85677.1| (AE000887) pleiotropic
regulatory protein DegT [Methanobacterium
thermoautotrophicum]
Length = 360
Score = 414 bits (1052), Expect = e-114
Identities = 198/362 (54%), Positives = 272/362 (74%), Gaps = 5/362 (1%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
MIP+A PII++EEI V+ VLKSG +AQG V FE++F+ Y+G +HA+A ++GT AL +
Sbjct: 1 MIPVATPIIDEEEIQEVIKVLKSGFIAQGPRVAEFEEKFAAYVGTEHAVATSSGTTALHL 60
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
AL A +G+GDEVITTPF+F A+AN+ L+ GA PVFADIDP T+N+DP + E IT T+
Sbjct: 61 ALLAAGVGKGDEVITTPFSFAATANAALYVGATPVFADIDPLTYNIDPERIEELITPSTR 120
Query: 121 AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTK 180
AI+ VHLYGQPADM ++A DH++ +IED AQAHGAE+ G+KVG+ GD A FSFYPTK
Sbjct: 121 AIIPVHLYGQPADMDPIMDLAADHDILVIEDAAQAHGAEYHGRKVGSMGDAACFSFYPTK 180
Query: 181 NMTTGEGGMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLD 240
N+TTGEGG++ TD+DE+AE AR++R HG+ E+Y H LGYN+RMT+I+AAIG AQL KL+
Sbjct: 181 NITTGEGGIITTDDDEIAEMARILRAHGETERYRHTYLGYNFRMTDISAAIGIAQLGKLE 240
Query: 241 KWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRN 300
++N RI+NA L+ + ++G++ P + V+HVFHQY +RV P SRDEL L
Sbjct: 241 EFNSRRIENAAYLTSQLGDLEGVSTPHIAAGVRHVFHQYTLRV----PGSRDELMGFLNE 296
Query: 301 RGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTL 360
RG+GT +HYP P++ Q LYQ+LG+ CP + A+ +VLS+PVHPA++ E+L+ + T+
Sbjct: 297 RGVGTGIHYPRPIYRQELYQRLGFDAR-CPVSEAAAAEVLSIPVHPALTGEELERVAGTV 355
Query: 361 EE 362
E
Sbjct: 356 RE 357
>sp|P15263|DEGT_BACST PLEIOTROPIC REGULATORY PROTEIN >gi|2126851|pir||I39836 probable
hydro-lyase (EC 4.2.1.-) degT - Bacillus
stearothermophilus >gi|142840|gb|AAA22387.1| (M29002)
degT protein [Bacillus stearothermophilus]
Length = 372
Score = 307 bits (779), Expect = 1e-82
Identities = 165/358 (46%), Positives = 222/358 (61%), Gaps = 10/358 (2%)
Query: 9 IEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIG 68
++ E + + V++S G V+ E + + Y KH I NG+ A+ +AL+A +G
Sbjct: 15 LKPEIMRVLDEVMRSSRFILGDYVKKLEADIAAYSRAKHGIGCGNGSDAIHIALQAAGVG 74
Query: 69 QGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLY 128
GDEVITT FTF A+A SI GAKPVF DIDP TFN+DP V +T KTKAI+ VHLY
Sbjct: 75 PGDEVITTAFTFFATAGSIARAGAKPVFVDIDPVTFNIDPAQVEAAVTEKTKAIIPVHLY 134
Query: 129 GQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEG 187
GQ ADM+A IA+ H L +IED AQA GA++ GK VG G A +SF+PTKN+ G+G
Sbjct: 135 GQMADMEAIAAIAKRHGLVVIEDAAQAIGAKYNGKCVGELGTAATYSFFPTKNLGAYGDG 194
Query: 188 GMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRI 247
GM++T++DELAE+ R+IR HG KY H LGYN R+ + AAI + LD+W E R
Sbjct: 195 GMIITNDDELAEKCRVIRVHGSKPKYYHHVLGYNSRLDEMQAAILSVKFPHLDRWTEQRR 254
Query: 248 KNAEILSRGIERIKG---LTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIG 304
K+A +R +E G +TP VD R HVFHQY IR RDEL L+ +GI
Sbjct: 255 KHAATYTRLLEEAVGDLVVTPKEVDGRY-HVFHQYTIRAP-----KRDELQAFLKEQGIA 308
Query: 305 TAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEE 362
T V+YP+P+H QP++ LGY P A +A+++ LSLP+ P + E Y++ + E
Sbjct: 309 TMVYYPLPLHLQPVFASLGYKEGQLPEAEKAAKEALSLPMFPELKEEQQQYVVEKIAE 366
>sp|Q58466|YA66_METJA HYPOTHETICAL PROTEIN MJ1066 >gi|2129289|pir||A64433 probable
hydro-lyase (EC 4.2.1.-) spsC homolog - Methanococcus
jannaschii >gi|1591718|gb|AAB99069.1| (U67549) spore
coat polysaccharide biosynthesis protein C (spsC)
[Methanococcus jannaschii]
Length = 386
Score = 299 bits (757), Expect = 4e-80
Identities = 156/379 (41%), Positives = 238/379 (62%), Gaps = 15/379 (3%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVA 61
+P +P I +EEIN V++ LKS + G + FE+ F Y+G K AI++ + T L ++
Sbjct: 7 LPPFRPCIGEEEINEVIDTLKSDWITMGPKTLKFEELFRNYIGSKFAISLNSCTAGLHLS 66
Query: 62 LKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKA 121
L AL I DEVITTP+TF A+ N I+ Q AKPVF DID +T+N++ ++ IT +TKA
Sbjct: 67 LVALNIKDKDEVITTPYTFAATGNVIVHQRAKPVFVDIDKETYNINVEEIENAITERTKA 126
Query: 122 ILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKN 181
I+ VH G P +M +IA D++LY+IED A A GAE++GKK+GT GD +FSFY TKN
Sbjct: 127 IIPVHYAGHPCEMDEILKIARDYDLYVIEDAAHALGAEYKGKKIGTIGDTTSFSFYATKN 186
Query: 182 MTTGEGGMVVTDNDELAERARLIRDHGQAEK------------YLHVELGYNYRMTNIAA 229
+TTGEGGMV TDN+E+AE+ +++R HG + Y +E GY Y MT+I A
Sbjct: 187 ITTGEGGMVTTDNEEIAEKIKILRLHGISRDAWKRYSSEGSWYYEIIECGYKYNMTDIQA 246
Query: 230 AIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVE-DDYP 288
+IG QLKK + + R + A+I + E ++GL P + VKH +H Y + + D
Sbjct: 247 SIGIHQLKKAEIMRKRREEIAKIYNEEFENLEGLITPTIKKHVKHAWHLYPLLINIDRLK 306
Query: 289 LSRDELAKELRNRGIGTAVHYPVPVHHQPLYQK-LGYPRDICPNAIEASRKVLSLPVHPA 347
++R + +EL+ + IGT+VH+ +P+H P Y+K GY + PNA + +SLP++P
Sbjct: 307 INRTKFIEELKKQNIGTSVHF-IPLHLHPFYRKTFGYKKGDFPNAEWVYEREISLPIYPK 365
Query: 348 VSREDLDYIIRTLEELGGE 366
++ +D+ ++ ++++ E
Sbjct: 366 MTDDDVIDVVNAVKKIVSE 384
>sp|P39623|SPSC_BACSU SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN SPSC
>gi|629072|pir||S39720 probable hydro-lyase (EC 4.2.1.-)
spsC - Bacillus subtilis >gi|413989|emb|CAA51621.1|
(X73124) ipa-65d [Bacillus subtilis]
>gi|2636324|emb|CAB15815.1| (Z99123) alternate gene
name: ipa-65d [Bacillus subtilis]
Length = 389
Score = 293 bits (741), Expect = 3e-78
Identities = 157/377 (41%), Positives = 238/377 (62%), Gaps = 16/377 (4%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVA 61
+P + P+I EEI V L+SG L++G +V+ FEKEF+ ++G KHA+AV + T AL +A
Sbjct: 9 LPYSLPLIGKEEIQEVTETLESGWLSKGPKVQQFEKEFAAFVGAKHAVAVNSCTAALFLA 68
Query: 62 LKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKA 121
LKA IG GDEVIT+P TF ++AN+I+ GA PVFADID T N+DP + +T +TKA
Sbjct: 69 LKAKGIGPGDEVITSPLTFSSTANTIIHTGATPVFADIDENTLNIDPVKLEAAVTPRTKA 128
Query: 122 ILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKN 181
++ VH GQ DM A +A++H L+++ED A A ++ + +G+ GD AFSFY TKN
Sbjct: 129 VVPVHFGGQSCDMDAILAVAQNHGLFVLEDAAHAVYTTYKQRMIGSIGDATAFSFYATKN 188
Query: 182 MTTGEGGMVVTDNDELAERARLIRDHGQAEK-----------YLHVEL-GYNYRMTNIAA 229
+ TGEGGM+ TD++ELA++ R++ HG ++ Y VE GY M ++ A
Sbjct: 189 LATGEGGMLTTDDEELADKIRVLSLHGMSKAAWNRYSSNGSWYYEVESPGYKMNMFDLQA 248
Query: 230 AIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYP- 288
A+G QLK+LD + R + A ++I GL PFV +H +H YV++V++
Sbjct: 249 ALGLHQLKRLDDMQKRREEIAGRYQTAFQQIPGLITPFVHDDGRHAWHLYVLQVDEKKAG 308
Query: 289 LSRDELAKELRNR-GIGTAVHYPVPVHHQPLYQK-LGYPRDICPNAIEASRKVLSLPVHP 346
++R E+ L++ IGT+VH+ +PVH P YQK GY PNA+ ++ LSLP++P
Sbjct: 309 VTRSEMITALKDEYNIGTSVHF-IPVHIHPYYQKQFGYKEADFPNAMNYYKRTLSLPLYP 367
Query: 347 AVSREDLDYIIRTLEEL 363
++S +D+D +I + ++
Sbjct: 368 SMSDDDVDDVIEAVRDI 384
>pir||S75490 probable hydro-lyase (EC 4.2.1.-) slr2114 - Synechocystis sp.
(strain PCC 6803) >gi|1653135|dbj|BAA18051.1| (D90911)
spore coat polysaccharide biosynthesis protein SpsC
[Synechocystis sp.]
Length = 345
Score = 277 bits (700), Expect = 2e-73
Identities = 145/328 (44%), Positives = 222/328 (67%), Gaps = 8/328 (2%)
Query: 39 FSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFAD 98
F+E+ G K+A+AV++GT AL +AL AL IG GDEVI +FIA+AN++ + GAKP+F D
Sbjct: 21 FAEFCGTKYAVAVSSGTAALHLALLALNIGAGDEVIVPTLSFIATANAVTYTGAKPIFVD 80
Query: 99 IDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGA 158
+ +T+N++P+ + IT +TKAI+ VHLYG PA M +IA+ ++L +IED A+AHGA
Sbjct: 81 SEWETWNINPDLIEAAITPRTKAIMPVHLYGHPAKMDKILDIAQRYHLAVIEDAAEAHGA 140
Query: 159 EFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQAEK--YLHV 216
++GK VG+ GD+ FSFY K +TTGEGGM+VTD++ELA++ R+++DHG ++K Y H
Sbjct: 141 TYQGKTVGSLGDLGIFSFYGNKIVTTGEGGMIVTDDEELAQKIRILKDHGMSKKQRYWHP 200
Query: 217 ELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVF 276
LGYNYR+TNI AA+G AQ+++++K E + + A++ + + +I+GLT P P + VF
Sbjct: 201 ILGYNYRITNIQAALGVAQMERINKIPEAKRRIAQLYEQELLQIQGLTLPPRQPWAESVF 260
Query: 277 HQYVIRV-EDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEA 335
Y I + +D L+RD+L L+ +GI T + +P+H QP+Y P A
Sbjct: 261 WLYTILINQDKLELNRDQLMSRLQEKGIETRPLF-IPIHRQPIYN----THQSLPVAESL 315
Query: 336 SRKVLSLPVHPAVSREDLDYIIRTLEEL 363
S+ LSLP +S E+L II +++++
Sbjct: 316 SKNGLSLPSFVTLSNENLYQIIDSIKKV 343
>pir||A72350 pleiotropic regulatory protein - Thermotoga maritima (strain MSB8)
>gi|4981189|gb|AAD35750.1|AE001739_13 (AE001739)
pleiotropic regulatory protein [Thermotoga maritima]
Length = 377
Score = 271 bits (686), Expect = 8e-72
Identities = 146/367 (39%), Positives = 233/367 (62%), Gaps = 22/367 (5%)
Query: 9 IEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIG 68
I E +NA+ ++ SG + G+ V E+E + + GVKH + V +G+ AL +AL+A+ +
Sbjct: 14 IRGEILNAIDKLISSGNVILGENVRRLEEEIASFTGVKHGVGVASGSDALLIALRAMGVE 73
Query: 69 QGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPND---VLEKITSKTKAILVV 125
+GD V+TTP+TF A+A++ GA+ +F D+D TFN+D N VL+K K KAI+ V
Sbjct: 74 KGDTVVTTPYTFFATASAPYRLGARVIFVDVDESTFNMDLNQLEHVLKK--EKVKAIIPV 131
Query: 126 HLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEF-----EGKKVGTFGDIAAFSFYPTK 180
HL+G+ D++A + E + + ++EDCAQ+ G+E+ E +K G+ GD A FSF+PTK
Sbjct: 132 HLFGRTVDLEALSFLREKYGVMILEDCAQSMGSEWKFSSGEIRKSGSVGDAAIFSFFPTK 191
Query: 181 NM-TTGEGGMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKL 239
N+ T G+GGM+VT++DE+AE +R++R HG +KY H ++GYN R+ I AAI R +L+ L
Sbjct: 192 NLGTYGDGGMIVTNSDEIAEESRILRVHGARKKYFHEKVGYNSRLDEIHAAILRVKLRYL 251
Query: 240 DKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVK------HVFHQYVIRVEDDYPLSRDE 293
++W E R + A + E K P V PRV+ HVFHQYV+ E++ R+
Sbjct: 252 ERWTEERTRVARTYQKLFEEKK---LPVVYPRVEEKGFRYHVFHQYVVLFENEE--VRER 306
Query: 294 LAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDL 353
+ + L+ RGI TA++YP+P+H Q ++ LGY P A S++ L+LP+ P + +++
Sbjct: 307 VREGLKERGIQTAIYYPLPLHLQKCFRDLGYQEGDFPVAESLSKRSLALPMFPELRDDEI 366
Query: 354 DYIIRTL 360
++ T+
Sbjct: 367 KEVVDTI 373
>gb|AAC68680.1| (AF079762) transaminase [Streptomyces venezuelae]
Length = 379
Score = 266 bits (672), Expect = 4e-70
Identities = 149/348 (42%), Positives = 198/348 (56%), Gaps = 6/348 (1%)
Query: 16 AVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVIT 75
A+ VL SG G E+E FE EF+ Y HA+ V +G AL +AL+ L IG GDEVI
Sbjct: 29 AIARVLDSGRYLLGPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDEVIV 88
Query: 76 TPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMK 135
T+IAS ++ GA PV + LDP V + IT +T+A+L VHLYG PADM
Sbjct: 89 PSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPRTRALLPVHLYGHPADMD 148
Query: 136 AFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGMVVTDN 194
A RE+A+ H L+++ED AQAHGA + G+++G +AAFSFYP KN+ G+GG VVT +
Sbjct: 149 ALRELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGD 208
Query: 195 DELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILS 254
ELAER R++R++G +KY H G N R+ + AA+ R +L LD WN R A
Sbjct: 209 PELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYL 268
Query: 255 RGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVH 314
G+ + G+ P P V+H + +R E RDEL L RGI T HYPVPVH
Sbjct: 269 SGLAGLPGIGLPVTAPDTDPVWHLFTVRTE-----RRDELRSHLDARGIDTLTHYPVPVH 323
Query: 315 HQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEE 362
P Y P P A +R+VLSLP+ P + R +I + E
Sbjct: 324 LSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVRE 371
>pir||H69142 perosamine synthetase - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2621390|gb|AAB84840.1| (AE000818)
perosamine synthetase [Methanobacterium
thermoautotrophicum]
Length = 363
Score = 264 bits (668), Expect = 1e-69
Identities = 148/368 (40%), Positives = 229/368 (62%), Gaps = 14/368 (3%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLA-QGKEVEAFEKEFSEYLGVKHAIAVTNGTIALD 59
MIPI +P I +EE+ V+ LKSG ++ +G+ + FE++F+ Y G+ I+ +NGT AL
Sbjct: 1 MIPILEPSIGNEELENVLEALKSGWISSRGEFITKFEEKFARYHGMGFGISTSNGTTALH 60
Query: 60 VALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT 119
+ALK++ I +GDEVI TF A+AN++++ AKPV D P + +DP+ + EKI T
Sbjct: 61 LALKSVGIKKGDEVIVPSLTFAATANAVIYCNAKPVLVDSHPDYWCIDPSRIEEKINKNT 120
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
+AI+ VHLYG P DM +IA++H L +IED A+AHGAE+ GKK+GTFGD++ FSFY
Sbjct: 121 RAIIPVHLYGHPCDMGWIGDIADEHGLIIIEDAAEAHGAEYRGKKIGTFGDVSCFSFYGN 180
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQ--AEKYLHVELGYNYRMTNIAAAIGRAQLK 237
K +TTGEGGM +T+++ELAER ++RDHG ++Y H E+G+NYRMTN+ AA+G AQL+
Sbjct: 181 KIITTGEGGMCLTNDEELAERMAVLRDHGMRPEKRYWHEEVGFNYRMTNLQAAVGVAQLE 240
Query: 238 KLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV---KHVFHQYVIRVEDDYPLSRDEL 294
K+D + + + AEI +RG+ + + P + + V+ Y I ++ + +L
Sbjct: 241 KIDGFINRKREIAEIYNRGLAELHENEELMLHPEMLWARSVYWVYSIVLKKRKNM---DL 297
Query: 295 AKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLD 354
+ L + G+ T + P++ P Y+ P A S LSLP + E ++
Sbjct: 298 IRYLNSCGVDTRPFF-YPLNLMPPYK----DDSSYPVAENLSYGGLSLPSSVEIGDEAIE 352
Query: 355 YIIRTLEE 362
Y++ + E
Sbjct: 353 YVVDRVRE 360
>sp|P14290|ERBS_SACER ERYTHROMYCIN BIOSYNTHESIS SENSORY TRANSDUCTION PROTEIN ERYC1
>gi|80670|pir||S06725 probable hydro-lyase (EC 4.2.1.-)
eryC1 - Saccharopolyspora erythraea
>gi|46974|emb|CAA33548.1| (X15541) open reading frame
(AA 1-365) [Saccharopolyspora erythraea]
Length = 365
Score = 261 bits (661), Expect = 7e-69
Identities = 150/343 (43%), Positives = 202/343 (58%), Gaps = 7/343 (2%)
Query: 20 VLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFT 79
VL SG G E EAFE EF+ Y H + V +G AL+++L AL +GQGDEVI T
Sbjct: 26 VLGSGWYLHGPENEAFEAEFAAYCENAHCVTVGSGCDALELSLVALGVGQGDEVIVPSHT 85
Query: 80 FIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFRE 139
FIA+ + GA PV + + + LDP V + IT +T AIL VHLYG PAD+ A R
Sbjct: 86 FIATWLGVPV-GAVPVPVEPEGVSHTLDPALVEQAITPRTAAILPVHLYGHPADLDALRA 144
Query: 140 IAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGMVVTDNDELA 198
IA+ H L L+ED AQA GA G +VG + AAFSFYP KN+ G+GG VVT + LA
Sbjct: 145 IADRHGLALVEDVAQAVGARHRGHRVGAGSNAAAFSFYPGKNLGALGDGGAVVTTDPALA 204
Query: 199 ERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIE 258
ER RL+R++G +KY+H G N R+ + AA+ R +L+ LD WN R A+ ++
Sbjct: 205 ERIRLLRNYGSKQKYVHEVRGTNARLDELQAAVLRVKLRHLDDWNARRTTLAQHYQTELK 264
Query: 259 RIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPL 318
+ G+T P P +H +V+R E +RD L + L + G+ T +HYP PVH P
Sbjct: 265 DVPGITLPETHPWADSAWHLFVLRCE-----NRDHLQRHLTDAGVQTLIHYPTPVHLSPA 319
Query: 319 YQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLE 361
Y LG P P A + +VLSLP+ P +SRE D++I TL+
Sbjct: 320 YADLGLPPGSFPVAESLAGEVLSLPIGPHLSREAADHVIATLK 362
>pir||S76874 probable hydro-lyase (EC 4.2.1.-) - Synechocystis sp. (strain PCC
6803) >gi|1653876|dbj|BAA18786.1| (D90917) pleiotropic
regulatory protein [Synechocystis sp.]
Length = 385
Score = 260 bits (658), Expect = 2e-68
Identities = 148/375 (39%), Positives = 218/375 (57%), Gaps = 28/375 (7%)
Query: 9 IEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIG 68
I+ E AV VL+SG GK V FE+ ++YLGVK+AI V +GT AL + L+AL IG
Sbjct: 15 IKAEIQQAVNGVLESGQFILGKTVADFEQAAADYLGVKYAIGVNSGTDALMIGLRALGIG 74
Query: 69 QGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLY 128
GDEVITTPF+F A+A SI GAKPVF D+ FNLDP+ + IT +TKAI+ VHL+
Sbjct: 75 PGDEVITTPFSFFATAESISNVGAKPVFVDVAITDFNLDPDKIKAAITPRTKAIMPVHLF 134
Query: 129 GQPADMKAFREIAEDHNLYLIEDCAQAHGAEFE-------------------GKKVGTFG 169
GQPA M + +A+ H L +IEDCAQ+ GA + G+ G G
Sbjct: 135 GQPAAMAQIKALADAHGLKIIEDCAQSFGAIYAGDCLGCDQGCDDQVRQALVGQYTGAMG 194
Query: 170 DIAAFSFYPTKNM-TTGEGGMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIA 228
D+ AFSF+PTKN+ G+GG++ T++ +A+ AR +R HG ++Y + LGYN R+ +
Sbjct: 195 DVGAFSFFPTKNLGAYGDGGLITTNDPAIADLARCLRVHGSKQRYQNEMLGYNSRLDALQ 254
Query: 229 AAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYP 288
AAI +L L +W+ R + A+ + + ++G+ P + HVFHQY +R+ +
Sbjct: 255 AAILNVKLSHLKEWSLGRRRVAQTYNDLFQGVEGIITPTI--TAGHVFHQYTLRILNG-- 310
Query: 289 LSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAV 348
RD LA ++ GI T ++YPVP P+Y+ P P + + +VLSLP+ P +
Sbjct: 311 -QRDALANAMQGMGISTMIYYPVPQDQLPVYRGQYAPN---PISDRLATEVLSLPIWPEM 366
Query: 349 SREDLDYIIRTLEEL 363
E + + + ++
Sbjct: 367 ETETVQTVAEKISQV 381
>pir||T51111 aminotransferase [imported] - Streptomyces antibioticus (ATCC
11891) >gi|5902174|gb|AAD55458.1| (AF055579)
aminotransferase [Streptomyces antibioticus]
Length = 368
Score = 258 bits (653), Expect = 6e-68
Identities = 147/346 (42%), Positives = 201/346 (57%), Gaps = 7/346 (2%)
Query: 16 AVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVIT 75
A VL SG G E+ AFE E++ Y G +H +AV +G AL++AL+A+ IG GDEVI
Sbjct: 22 ATGRVLDSGRYLLGPELAAFETEWAAYCGARHCVAVGSGCDALELALRAMDIGPGDEVIV 81
Query: 76 TPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMK 135
TF A+ ++ GA+PV + +P TF LDP V ITS+T+ IL VHLYG PAD+
Sbjct: 82 PAHTFAATWLAVSATGAEPVAVEPEPATFTLDPERVEAAITSRTRVILPVHLYGHPADLA 141
Query: 136 AFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGMVVTDN 194
A E+AE H + ++ED AQAHGA+ G++VG + AFSFYP KN+ G+GG VVTD+
Sbjct: 142 ALSEVAERHGVRILEDAAQAHGAQAYGRRVGAW-STTAFSFYPGKNLGGFGDGGAVVTDD 200
Query: 195 DELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILS 254
ELAER RL+R++G EKY H N+R+ + AA+ R +L LD W E R A
Sbjct: 201 AELAERVRLLRNYGSREKYRHEVRATNFRLDELQAAVLRVKLAHLDAWTERRAAVAARYL 260
Query: 255 RGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVH 314
G+ + G+ P P V+H +VIR D R L + L G+ T +HYPVPVH
Sbjct: 261 DGLAGLDGIVLPRPAPWADPVWHLFVIRSAD-----RSALRERLAAAGVETLIHYPVPVH 315
Query: 315 HQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTL 360
Y P A +R+VLSLP+ P +S + + +I +
Sbjct: 316 RSEAYAGSRQAARAQPVAERLAREVLSLPIGPHLSDDAVKAVIEAV 361
>gb|AAC38670.2| (AF062345) putative perosamine synthetase; LpsC [Caulobacter
crescentus]
Length = 346
Score = 257 bits (651), Expect = 1e-67
Identities = 147/338 (43%), Positives = 204/338 (59%), Gaps = 6/338 (1%)
Query: 29 GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFTFIASANSIL 88
G+ + FEK F++Y GVKHAIA NGT AL +AL A+ IG GDEVI T+IASANS+
Sbjct: 10 GRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVT 69
Query: 89 FQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYL 148
+ GA PV D DP+TFNLD + IT +TKAI+ VHLYGQ DM E+A HNL +
Sbjct: 70 YCGATPVLVDNDPRTFNLDAAKLEALITPRTKAIMPVHLYGQICDMDPILEVARRHNLLV 129
Query: 149 IEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHG 208
IED A+A GA + GKK G+ GD A FSF+ K +TTGEGGM+ T++D+LA + RL+R G
Sbjct: 130 IEDAAEAVGATYRGKKSGSLGDCATFSFFGNKIITTGEGGMITTNDDDLAAKMRLLRGQG 189
Query: 209 Q--AEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERI-KGLTP 265
+Y +G+NYRMTNI AAIG AQL+++D+ R + + + R+ +T
Sbjct: 190 MDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARLGNRVTK 249
Query: 266 PFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYP 325
P V +HVF Y +R+ + +RD++ K+L GI + + P+H P Y L
Sbjct: 250 PHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFH-PMHIMPPYAHLA-- 306
Query: 326 RDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEEL 363
D A L+LP H ++ D+D +I L+++
Sbjct: 307 TDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQV 344
>gb|AAF59939.1| (AF237895) aminotransferase-like protein [Streptomyces
antibioticus]
Length = 368
Score = 256 bits (648), Expect = 2e-67
Identities = 147/346 (42%), Positives = 200/346 (57%), Gaps = 7/346 (2%)
Query: 16 AVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVIT 75
A VL SG G E+ AFE E++ Y G +H +AV +G AL++AL+A+ IG GDEVI
Sbjct: 22 ATGRVLDSGRYLLGPELAAFETEWAAYCGARHCVAVGSGCDALELALRAMDIGPGDEVIV 81
Query: 76 TPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMK 135
TF A+ ++ GA+PV + +P TF LDP V ITS+T+ IL VHLYG PAD+
Sbjct: 82 PAHTFAATWLAVSATGAEPVAVEPEPATFTLDPERVEAAITSRTRVILPVHLYGHPADLA 141
Query: 136 AFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGMVVTDN 194
A E+AE H + ++ED AQAHGA+ G++VG + AFSFYP KN+ G+GG VVTD+
Sbjct: 142 ALSEVAERHGVRILEDAAQAHGAQAYGRRVGAW-STTAFSFYPGKNLGGFGDGGAVVTDD 200
Query: 195 DELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILS 254
ELAER RL+R++G EKY H N R+ + AA+ R +L LD W E R A
Sbjct: 201 AELAERVRLLRNYGSREKYRHEVRATNSRLDELQAAVLRVKLAHLDAWTERRAAVAARYL 260
Query: 255 RGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVH 314
G+ + G+ P P V+H +VIR D R L + L G+ T +HYPVPVH
Sbjct: 261 DGLAGLDGIVLPRPAPWADPVWHLFVIRSAD-----RSALRERLAAAGVETLIHYPVPVH 315
Query: 315 HQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTL 360
Y P A +R+VLSLP+ P +S + + +I +
Sbjct: 316 RSEAYAGSRLAARAQPVAERLAREVLSLPIGPHLSDDAVKAVIEAV 361
>pir||S28471 probable hydro-lyase (EC 4.2.1.-) perosamine synthetase - Vibrio
cholerae >gi|48386|emb|CAA42137.1| (X59554) putative
perosamine synthetase [Vibrio cholerae]
>gi|1586120|prf||2203285D perosamine synthetase [Vibrio
cholerae]
Length = 367
Score = 256 bits (647), Expect = 3e-67
Identities = 143/367 (38%), Positives = 224/367 (60%), Gaps = 12/367 (3%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLA-QGKEVEAFEKEFSEYLGVKHAIAVTNGTIALD 59
MIP+ +P ++ E + + + SG ++ +GK ++ FE EF+E+L VKHA V+NGT+AL
Sbjct: 1 MIPVYEPSLDGNERKYLNDCIDSGWVSSRGKYIDRFETEFAEFLKVKHATTVSNGTVALH 60
Query: 60 VALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT 119
+A+ AL I QGDEVI FT++AS N+I+ GA PVFA+I+ ++ + DV KI KT
Sbjct: 61 LAMSALGITQGDEVIVPTFTYVASVNTIVQCGALPVFAEIEGESLQVSVEDVKRKINKKT 120
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
KA++ VH+YGQ D+++ R++ ++H LYLIEDCA+A G GKKVGTFGD++ FSF+
Sbjct: 121 KAVMAVHIYGQACDIQSLRDLCDEHGLYLIEDCAEAIGTAVNGKKVGTFGDVSTFSFFGN 180
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHG--QAEKYLHVELGYNYRMTNIAAAIGRAQLK 237
K +T+GEGGMVV+++D + ++ +++ G ++Y H + YNYRMTN+ AAIG AQL+
Sbjct: 181 KTITSGEGGMVVSNSDIIIDKCLRLKNQGVVAGKRYWHDLVAYNYRMTNLCAAIGVAQLE 240
Query: 238 KLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQY---VIRVEDDYPLSRDEL 294
++DK + + AEI + GL P V FH Y I ++ ++ + RD L
Sbjct: 241 RVDKIIKAKRDIAEIYR---SELAGL-PMQVHKESNGTFHSYWLTSIILDQEFEVHRDGL 296
Query: 295 AKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLD 354
L N I + + P H P+Y+ L + P + S + ++LP P + + +
Sbjct: 297 MTFLENNDIESRPFF-YPAHTLPMYEHLA-EKTAFPLSNSYSHRGINLPSWPGLCDDQVK 354
Query: 355 YIIRTLE 361
I ++
Sbjct: 355 EICNCIK 361
>emb|CAA68523.1| (Y00459) aminotransferase [Streptomyces griseus]
Length = 378
Score = 255 bits (645), Expect = 5e-67
Identities = 150/361 (41%), Positives = 212/361 (58%), Gaps = 14/361 (3%)
Query: 7 PIIEDEEINAVVNVLKSGMLA-QGKE-VEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA 64
P + D++I A V L+S L QG VE FE + GV+HA+AV+ GT A+ +AL A
Sbjct: 11 PQLTDDDIEAAVAALRSNRLVGQGNSTVEEFEAALAAGQGVEHAVAVSTGTAAVHLALHA 70
Query: 65 LKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILV 124
L +G GDEVI TFI SA+ + + GA+PVFAD+ P T LDP+ V I +TKAI+V
Sbjct: 71 LDVGPGDEVIVPTHTFIGSASPVTYLGARPVFADVTPDTHCLDPDSVKSLIGERTKAIVV 130
Query: 125 VHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTT 184
VH+ G ADM A +A + + +IED AQA G E G+ +G FGD+A S + K +T+
Sbjct: 131 VHINGIAADMAALTAVAAEAGVPVIEDAAQALGTEIGGRPIGGFGDLACVSLFEQKVITS 190
Query: 185 -GEGGMVVTDNDELAERARLIRDHGQAEK-------YLHVELGYNYRMTNIAAAIGRAQL 236
GEGG V+TDN AER R +R HG+ + H E+GYNYR+T++ AA+G AQ
Sbjct: 191 GGEGGAVLTDNPVYAERVRRLRSHGEGPVSGSPGMIWAH-EVGYNYRLTSVQAAVGLAQH 249
Query: 237 KKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIR-VEDDYPLSRDELA 295
K+L E R +NA LS + ++GL P P H + +Y +R V D S ++A
Sbjct: 250 KRLGDLVEARRRNAAYLSERLAGVEGLELPVEPPGTTHAYWKYAVRVVPGDGRRSAADIA 309
Query: 296 KELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDY 355
LR+RG+ + YP P+H QP + + Y P A S+++L+LP HP + LD+
Sbjct: 310 AHLRSRGVPVLLRYPYPLHKQPAFAE--YHGVSLPVAERLSQELLALPSHPGLVEGHLDH 367
Query: 356 I 356
+
Sbjct: 368 V 368
>pir||C82346 perosamine synthase VC0244 [imported] - Vibrio cholerae (group O1
strain N16961) >gi|9654653|gb|AAF93420.1| (AE004113)
perosamine synthase [Vibrio cholerae]
Length = 367
Score = 255 bits (645), Expect = 5e-67
Identities = 143/367 (38%), Positives = 224/367 (60%), Gaps = 12/367 (3%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLA-QGKEVEAFEKEFSEYLGVKHAIAVTNGTIALD 59
MIP+ +P ++ E + + + SG ++ +GK ++ FE EF+E+L VKHA V+NGT+AL
Sbjct: 1 MIPVYEPSLDGNERKYLNDCIDSGWVSSRGKYIDRFETEFAEFLKVKHATTVSNGTVALH 60
Query: 60 VALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT 119
+A+ AL I QGDEVI FT++AS N+I+ GA PVFA+I+ ++ + DV KI KT
Sbjct: 61 LAMSALGITQGDEVIVPTFTYVASVNTIVQCGALPVFAEIEGESLQVSVEDVKRKINKKT 120
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
KA++ VH+YGQ D+++ R++ ++H LYLIEDCA+A G GKKVGTFGD++ FSF+
Sbjct: 121 KAVMAVHIYGQACDIQSLRDLCDEHGLYLIEDCAEAIGTAVNGKKVGTFGDVSTFSFFGN 180
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHG--QAEKYLHVELGYNYRMTNIAAAIGRAQLK 237
K +T+GEGGMVV+++D + ++ +++ G ++Y H + YNYRMTN+ AAIG AQL+
Sbjct: 181 KTITSGEGGMVVSNSDIIIDKCLRLKNQGVVAGKRYWHDLVAYNYRMTNLCAAIGVAQLE 240
Query: 238 KLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQY---VIRVEDDYPLSRDEL 294
++DK + + AEI + GL P V FH Y I ++ ++ + RD L
Sbjct: 241 RVDKIIKRKRDIAEIYR---SELAGL-PMQVHKESNGTFHSYWLTSIILDQEFEVHRDGL 296
Query: 295 AKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLD 354
L N I + + P H P+Y+ L + P + S + ++LP P + + +
Sbjct: 297 MTFLENNDIESRPFF-YPAHTLPMYEHLA-EKTAFPLSNSYSHRGINLPSWPGLCDDQVK 354
Query: 355 YIIRTLE 361
I ++
Sbjct: 355 EICNCIK 361
>gb|AAB50842.1| (S83460) perosamine synthetase homolog=rfbE(EcO157:H7) [Escherichia
coli, O157:H7 strain 86-24, Peptide, 364 aa]
>gi|4867919|dbj|BAA77728.1| (AB008676) perosamine
synthetase [Escherichia coli]
Length = 364
Score = 255 bits (644), Expect = 7e-67
Identities = 148/365 (40%), Positives = 223/365 (60%), Gaps = 13/365 (3%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLA-QGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
IP+ +P + +E V L S ++ +G ++ FE +F+E V++A V+NGT+AL +
Sbjct: 4 IPVYQPSLTGKEKEYVNECLDSTWISSKGNYIQKFENKFAEQNHVQYATTVSNGTVALHL 63
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
AL AL I +GDEVI T+IAS N+I + GA P+F D D +T+ + +D+ +KIT+KTK
Sbjct: 64 ALLALGISEGDEVIVPTLTYIASVNAIKYTGATPIFVDSDNETWQMSVSDIEQKITNKTK 123
Query: 121 AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTK 180
AI+ VHLYG P DM+ E+A+ NL++IEDCA+A G++++GK VGTFGDI+ FSF+ K
Sbjct: 124 AIMCVHLYGHPCDMEQIVELAKSRNLFVIEDCAEAFGSKYKGKYVGTFGDISTFSFFGNK 183
Query: 181 NMTTGEGGMVVTDNDELAERARLIRDHGQA--EKYLHVELGYNYRMTNIAAAIGRAQLKK 238
+TTGEGGMVVT++ L +R + G A +Y H +GYNYRMTNI AAIG AQL++
Sbjct: 184 TITTGEGGMVVTNDKTLYDRCLHFKGQGLAVHRQYWHDVIGYNYRMTNICAAIGLAQLEQ 243
Query: 239 LDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQY-VIRVEDDYPLSRDELAKE 297
D + + + A+I + I + V K VFH Y ++ + R+EL
Sbjct: 244 ADDFISRKREIADIYKKNINSLVQ-----VHKESKDVFHTYWMVSILTRTAEEREELRNH 298
Query: 298 LRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYII 357
L ++ I T + PVH P+Y + Y + P A + + ++LP P++S E + YI
Sbjct: 299 LADKLIETRPVF-YPVHTMPMYSE-KYQKH--PIAEDLGWRGINLPSFPSLSNEQVIYIC 354
Query: 358 RTLEE 362
++ E
Sbjct: 355 ESINE 359
>gb|AAC32343.1| (AF061251) perosamine synthetase Per [Escherichia coli]
Length = 366
Score = 255 bits (644), Expect = 7e-67
Identities = 148/365 (40%), Positives = 223/365 (60%), Gaps = 13/365 (3%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLA-QGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
IP+ +P + +E V L S ++ +G ++ FE +F+E V++A V+NGT+AL +
Sbjct: 6 IPVYQPSLTGKEKEYVNECLDSTWISSKGNYIQKFENKFAEQNHVQYATTVSNGTVALHL 65
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
AL AL I +GDEVI T+IAS N+I + GA P+F D D +T+ + +D+ +KIT+KTK
Sbjct: 66 ALLALGISEGDEVIVPTLTYIASVNAIKYTGATPIFVDSDNETWQMSVSDIEQKITNKTK 125
Query: 121 AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTK 180
AI+ VHLYG P DM+ E+A+ NL++IEDCA+A G++++GK VGTFGDI+ FSF+ K
Sbjct: 126 AIMCVHLYGHPCDMEQIVELAKSRNLFVIEDCAEAFGSKYKGKYVGTFGDISTFSFFGNK 185
Query: 181 NMTTGEGGMVVTDNDELAERARLIRDHGQA--EKYLHVELGYNYRMTNIAAAIGRAQLKK 238
+TTGEGGMVVT++ L +R + G A +Y H +GYNYRMTNI AAIG AQL++
Sbjct: 186 TITTGEGGMVVTNDKTLYDRCLHFKGQGLAVHRQYWHDVIGYNYRMTNICAAIGLAQLEQ 245
Query: 239 LDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQY-VIRVEDDYPLSRDELAKE 297
D + + + A+I + I + V K VFH Y ++ + R+EL
Sbjct: 246 ADDFISRKREIADIYKKNINSLVQ-----VHKESKDVFHTYWMVSILTRTAEEREELRNH 300
Query: 298 LRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYII 357
L ++ I T + PVH P+Y + Y + P A + + ++LP P++S E + YI
Sbjct: 301 LADKLIETRPVF-YPVHTMPMYSE-KYQKH--PIAEDLGWRGINLPSFPSLSNEQVIYIC 356
Query: 358 RTLEE 362
++ E
Sbjct: 357 ESINE 361
>dbj|BAA31964.1| (D64132) A porR mutant of Pophyromonas gingivalis shows reduced
expression expression of RGP and KGP, lesspigmentation
of its colonies, and no hemagglutination; regulatory
protein for pigmentation and extracellular proteinase
production [Porphyromonas >
Length = 384
Score = 252 bits (637), Expect = 5e-66
Identities = 140/352 (39%), Positives = 212/352 (59%), Gaps = 8/352 (2%)
Query: 16 AVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVIT 75
A+ V+ S GKEV AF ++ + YLGVKH I NGT AL ++L AL + GDE+I
Sbjct: 28 AIHTVIDSTAFINGKEVHAFAEDLAAYLGVKHVIPCANGTDALQISLMALGLKVGDEIIV 87
Query: 76 TPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMK 135
FT+ ASA +I G PVFAD+DP TFNL + ++ KTKAI+ VHL+GQ DM+
Sbjct: 88 PDFTYAASAEAIGLLGLTPVFADVDPITFNLTSKGCEKVLSDKTKAIIPVHLFGQSCDME 147
Query: 136 AFREIAEDHNLYLIEDCAQAHGAEF---EG--KKVGTFGDIAAFSFYPTKNM-TTGEGGM 189
A+ ++L++IED AQA G + +G +K GT G I SF+P+KN+ G+GG
Sbjct: 148 PLLAFAKRNDLFVIEDNAQAMGGGYTISDGSIRKTGTMGHIGCASFFPSKNLGCYGDGGA 207
Query: 190 VVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKN 249
V T++DELA+R R+I +HGQ KY H +G N R+ I AAI R +L+ LD++N +R +
Sbjct: 208 VTTNDDELAKRVRMIANHGQKIKYKHDIIGCNSRLDTIQAAILRVKLQYLDRFNALRNEV 267
Query: 250 AEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHY 309
A + +E I+ L P + HV+HQY +++ D +RD L + L N I + ++Y
Sbjct: 268 ASHYTSLLEGIEWLQTPTSLQQSSHVYHQYTLKLLDQN--TRDGLREHLTNHKIASMIYY 325
Query: 310 PVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLE 361
P+P+H QP + + + + + SR VLS+P++P + E + ++ ++
Sbjct: 326 PIPLHRQPAFVGIAHWGESLDVSDSLSRTVLSIPIYPEMEIEQIHAVVSAIK 377
>gb|AAD52182.1|AF144879_21 (AF144879) unknown [Leptospira interrogans]
Length = 363
Score = 250 bits (631), Expect = 2e-65
Identities = 142/352 (40%), Positives = 205/352 (57%), Gaps = 9/352 (2%)
Query: 11 DEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQG 70
DE ++ ++SG GKEV FE +F+EY G ++ I V NG AL +ALKAL + +
Sbjct: 16 DEYKTKLLETIESGWYILGKEVSNFESQFAEYNGNRYCIGVGNGLDALILALKALGLEKN 75
Query: 71 DEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQ 130
E+I T+IAS +IL G KPV + D +T+N+DP + EKI KTK IL+VHLYG+
Sbjct: 76 SEIIVPSNTYIASILAILHAGLKPVLVEPDIRTYNIDPQKIEEKINFKTKGILIVHLYGK 135
Query: 131 PADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGM 189
P +M + +I E +NL+L+EDCAQ+HGA ++ KK GTFG+++ FSFYPTKN+ G+ G
Sbjct: 136 PCEMDSILKIKEKNNLFLVEDCAQSHGALYKNKKTGTFGEMSGFSFYPTKNLGALGDAGA 195
Query: 190 VVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKN 249
VVTDND + R +R++G + KY + +GYN R+ + A I +LK LD NE +
Sbjct: 196 VVTDNDLYHDEIRKLRNYGSSIKYKNDLVGYNSRLDELQATILSIKLKHLDVMNEHKRSL 255
Query: 250 AEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHY 309
A+I ++ + P VD V V+H + IR RD+L L G+ T VHY
Sbjct: 256 AKIYLENLK--EDFIKPIVDEEVYDVYHIFNIR-----HTKRDDLRDYLLKNGVKTEVHY 308
Query: 310 PVPVHHQ-PLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTL 360
P+P H Q + + Y + E R LSLP+ + ED+ I+ +
Sbjct: 309 PIPPHKQIAMKDVILYAEGEFAISEEIHRTTLSLPISTFHTEEDIYKIVEIM 360
>emb|CAA07383.1| (AJ006985) StrS [Streptomyces glaucescens]
Length = 378
Score = 247 bits (624), Expect = 2e-64
Identities = 145/360 (40%), Positives = 208/360 (57%), Gaps = 12/360 (3%)
Query: 7 PIIEDEEINAVVNVLKSGMLAQ--GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA 64
P + D+++ A V L++ L VE FE +E V+HA+AV+ GT A+ +AL A
Sbjct: 11 PQLSDDDVEAAVAALRANRLVGLGNPVVEQFESALAESQAVEHAVAVSTGTAAVHLALHA 70
Query: 65 LKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILV 124
L +G GDEVI TFI SA+ I + GA+PVFAD+ P T LDP+ V IT +TKAI+V
Sbjct: 71 LDVGPGDEVIVPAHTFIGSASPIAYLGARPVFADVTPDTHCLDPDSVKSLITERTKAIVV 130
Query: 125 VHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTT 184
VH+ G ADM + IA D + L+ED AQA G G+ VG FGD+A S + K +T+
Sbjct: 131 VHINGVAADMASLSAIATDAGVPLVEDMAQALGTSIGGRPVGGFGDLACVSLFEQKVITS 190
Query: 185 -GEGGMVVTDNDELAERARLIRDHGQAE------KYLHVELGYNYRMTNIAAAIGRAQLK 237
GEGG V+T+N AER R +R HG+ E+GYNYR+T + AA+G +Q
Sbjct: 191 GGEGGAVLTNNPGYAERVRRLRSHGEGPIADRPGLIWAYEVGYNYRLTAVQAAVGLSQHG 250
Query: 238 KLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIR-VEDDYPLSRDELAK 296
+L + E R +NA LS + ++GL P H F +YV+R V + E+A
Sbjct: 251 RLGEMVEARRRNAAYLSERLADVEGLELPVEPEGTVHAFWKYVVRAVPAGGRPTAAEIAA 310
Query: 297 ELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYI 356
LR+RG+ + YP P+H QP + + + P A S+++L+LP HPA++ LD++
Sbjct: 311 TLRSRGVPVLLRYPFPLHKQPAFAE--HQSVSLPVAERLSQELLALPSHPALTERHLDHV 368
>gb|AAD45657.1|AF126256_2 (AF126256) FlmB [Aeromonas caviae]
Length = 387
Score = 244 bits (617), Expect = 1e-63
Identities = 142/385 (36%), Positives = 219/385 (56%), Gaps = 24/385 (6%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
MIP K I ++I+ VV VL+S L QG +V FEK + + G +A+AV + T AL +
Sbjct: 1 MIPYGKQEITQQDIDGVVAVLQSDFLTQGPKVPEFEKYLTTHTGAAYALAVNSATSALHI 60
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT- 119
A AL +G GD + T+P TF+ASAN L+ GAK F IDP T+NL P + +K+ +
Sbjct: 61 ACLALGLGPGDFLWTSPVTFVASANCGLYCGAKVDFVHIDPDTYNLCPKQLEKKLIAANA 120
Query: 120 -----KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGT--FGDIA 172
K ++ VHL GQP DM+A +A ++ +IED + A G + + +G + DI
Sbjct: 121 NGTLPKIVVPVHLCGQPCDMEAISRLATEYGFKVIEDASHAIGGSYLNEPIGNCRYSDIT 180
Query: 173 AFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQAEK-------------YLHVELG 219
FSF+P K +TT EGG VVT+ +LA++ L+R HG Y ++LG
Sbjct: 181 VFSFHPVKIITTAEGGAVVTNQKDLADKMALLRSHGITRDIEQMKGESHGGWYYQQIDLG 240
Query: 220 YNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQY 279
+NYRMT + AA+G Q+++LD++ R + A+ +R ++R+ + PF H Y
Sbjct: 241 FNYRMTELQAALGITQIQRLDEFIAARHRLADRYNRLLKRLP-IVLPFQLENTHSGLHLY 299
Query: 280 VIRVE-DDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRK 338
VIR++ ++ L+ E+ + LR GIG VHY +PVH QP Y+ +G+ P A + R+
Sbjct: 300 VIRLQLNNISLTHREVFEALRENGIGVNVHY-IPVHTQPYYEDMGFKSGDFPEAEQYYRE 358
Query: 339 VLSLPVHPAVSREDLDYIIRTLEEL 363
+SLP+ ++ E D ++ L E+
Sbjct: 359 AISLPMFHGMTEEQQDKVVCVLSEI 383
>gb|AAD12965.1| (AF078135) unknown [Leptospira borgpetersenii]
Length = 363
Score = 242 bits (611), Expect = 5e-63
Identities = 136/343 (39%), Positives = 201/343 (57%), Gaps = 11/343 (3%)
Query: 21 LKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFTF 80
++SG GKEV +FE +F++Y G ++ I V NG AL +ALKAL I + E+I T+
Sbjct: 26 IQSGWYILGKEVSSFENQFAQYNGNQYCIGVGNGLDALILALKALNIEKDSEIIVPSNTY 85
Query: 81 IASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREI 140
IAS +IL G +P+ + D +T+N+DP + EKI S+TK IL+VHLYG+P +M + +I
Sbjct: 86 IASILAILHAGLRPILVEPDIRTYNIDPERIEEKINSRTKGILIVHLYGKPCEMDSILKI 145
Query: 141 AEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGMVVTDNDELAE 199
E +NL+L+EDCAQ+HGA ++GKK GTFG+I FSFYPTKN+ G+ G VVTDND +
Sbjct: 146 KEKNNLFLVEDCAQSHGALYKGKKTGTFGEINGFSFYPTKNLGAIGDAGAVVTDNDLYHD 205
Query: 200 RARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIER 259
+ +R++G + KY + LGYN R+ + A I +LK LD NE + A+I +E
Sbjct: 206 EVKKLRNYGSSIKYKNDLLGYNSRLDELQAIILNIKLKYLDAMNEHKRNLAKIY---LEN 262
Query: 260 IK-GLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQ-P 317
+K P +D V+H + +R RD L L G+ T +HYP+P H Q
Sbjct: 263 LKDDFIKPVIDEGTYDVYHIFNVR-----HTRRDGLRDYLLKNGVKTEIHYPIPPHKQVA 317
Query: 318 LYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTL 360
+ Y + E R LSLP+ ++ D+ ++ +
Sbjct: 318 MKDVFTYVEGEFAISEEVHRTTLSLPISTFHTKNDIYKVVEIM 360
>pir||B81396 probable aminotransferase (degT family) Cj0505c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6967974|emb|CAB75142.1| (AL139075) putative
aminotransferase (degT family) [Campylobacter jejuni]
Length = 357
Score = 240 bits (606), Expect = 2e-62
Identities = 136/348 (39%), Positives = 209/348 (59%), Gaps = 12/348 (3%)
Query: 12 EEINAVV-NVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQG 70
+EINA + +VL S G ++ FE+ + +LGVKHAI ++GT AL +AL+ L IG+
Sbjct: 15 DEINAEIESVLSSSSFIGGAKLNEFEQNLAHFLGVKHAIGCSSGTSALYLALRVLDIGKD 74
Query: 71 DEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQ 130
DEVI FTFIA+A + GAKPVFADI+ +NLD V + ITSKTKA++ V ++GQ
Sbjct: 75 DEVIVPSFTFIATAEVVALVGAKPVFADINLSNYNLDFKAVQKAITSKTKAVIAVSMFGQ 134
Query: 131 PADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGM 189
+D++A EI +D N+ LIED AQ+ GA F+G+K + I+ SF+P+K + G+GG
Sbjct: 135 MSDLRALEEILKDKNITLIEDGAQSFGASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGA 194
Query: 190 VVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKN 249
+ +DE+A++ R++ +HGQ ++Y H +G N R+ + AAI +LK L+K + R K
Sbjct: 195 IFCHDDEIAKKIRILLNHGQTQRYKHEFIGINGRLDTLQAAILNVKLKYLEKELDKRQKL 254
Query: 250 AEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHY 309
A+I + +K P ++P + QY + VED R + ++ I A+HY
Sbjct: 255 AQIYN---ANLKNCQIPQINPNAFSAYAQYSVLVED-----RASVLRKFEKANIPYAIHY 306
Query: 310 PVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYII 357
P P+H QP + + + N+ AS +LSLP P +S E+ + +I
Sbjct: 307 PTPLHKQPCFSE--FSNLELKNSEYASEHILSLPFSPFLSEEEQEQVI 352
>pir||H81983 pilin glycosylation protein NMA0638 [imported] - Neisseria
meningitidis (group A strain Z2491)
>gi|7379371|emb|CAB83928.1| (AL162753) pilin
glycosylation protein [Neisseria meningitidis Z2491]
Length = 404
Score = 240 bits (606), Expect = 2e-62
Identities = 139/374 (37%), Positives = 216/374 (57%), Gaps = 19/374 (5%)
Query: 7 PIIEDEEINAVVNVLKSGMLAQ--GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA 64
P EE +AV VL S + G E FEKEF+ + G ++A+A++NGT+ALDVALKA
Sbjct: 23 PCFIQEEADAVSKVLLSNKVNYWTGSECREFEKEFAAFAGTRYAVALSNGTLALDVALKA 82
Query: 65 LKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILV 124
+ IG GD+VI T TF+ASA+ I+ GA PVFAD+D + N+ V +T TKAI+V
Sbjct: 83 MGIGAGDDVIVTSRTFLASASCIVNAGANPVFADVDLNSQNISAETVKAVLTPNTKAIIV 142
Query: 125 VHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTT 184
VHL G PA+M +A++H+L++IEDCAQAHGA+++GK VG+ G + A+SF K MTT
Sbjct: 143 VHLAGMPAEMDGIMALAKEHDLWVIEDCAQAHGAKYKGKSVGSIGHVGAWSFCQDKIMTT 202
Query: 185 -GEGGMVVTDNDELAERARLIRDHGQAE------------KYLHVELGYNYRMTNIAAAI 231
GEGGMV T++ L E+ +DHG++ ++LH G N+RM + A I
Sbjct: 203 GGEGGMVTTNDKTLWEKMWSYKDHGKSYDAVYHREHAPGFRWLHESFGTNWRMMEMQAVI 262
Query: 232 GRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDY---P 288
GR QLK++ +W R +NA L+ + + K + V ++H +++ + V+ ++
Sbjct: 263 GRIQLKRMPEWTARRQENAAKLAESLGKFKSIRLVEVADYIEHAQYKFYVFVKPEHLKEG 322
Query: 289 LSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGY-PRDICPNAIEASRKVLSLPVHPA 347
+RD + EL R + V+ + + + P++ NA+E L VHP
Sbjct: 323 WTRDRIVNELNARKVPCYQGSCSEVYLEKAFDNTPWRPKERLKNAVELGDTSLMFLVHPT 382
Query: 348 VSREDLDYIIRTLE 361
++ ++ + + +E
Sbjct: 383 LTDGEIAFCKKHIE 396
>emb|CAA07666.1| (AJ007747) putative amino-sugar biosynthesis protein [Bordetella
bronchiseptica]
Length = 395
Score = 239 bits (604), Expect = 3e-62
Identities = 144/389 (37%), Positives = 213/389 (54%), Gaps = 28/389 (7%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVK-HAIAVTNGTIALDV 60
+P A P I + EI AV ++SG L G FE+EF+ Y+G A+AV + T L +
Sbjct: 5 LPFALPDIGEAEIQAVTESMRSGWLTTGPNAREFEREFAAYMGADVEAVAVNSATAGLHL 64
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
AL+A+ +G GDEVITT TF ASA + GA+PV DIDP T + P + IT +T+
Sbjct: 65 ALEAIGVGPGDEVITTTHTFTASAEVARYLGAEPVLVDIDPATLCISPAAIERAITPRTR 124
Query: 121 AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTF-GDIAAFSFYPT 179
AI+ VH G DM + EIA H L +IED A A A ++G+++G+ D+ +SFY T
Sbjct: 125 AIVPVHYGGLSCDMDSILEIARKHGLKVIEDAAHALPASWQGRRIGSLESDLTVYSFYAT 184
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHG-------------QAEKYLHVELGYNYRMTN 226
K + TGEGGMVVT + LA+R R++R HG A Y V G+ Y MT+
Sbjct: 185 KTLATGEGGMVVTRDPALAKRCRVMRLHGIDRDAFDRFTSKKPAWYYEIVAPGFKYNMTD 244
Query: 227 IAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFV--DPRV---------KHV 275
AAA+GR QL+++ + + R + A + + PP P V +H
Sbjct: 245 TAAAMGRVQLQRVQQMRDRRAQIAAAYDQAFADLPLTLPPSPGRTPGVERAAHRDDDEHS 304
Query: 276 FHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQ-KLGYPRDICPNAIE 334
+H Y IR+ PL RD+ + GIG +VHY VP+H QP ++ + G D+ P++
Sbjct: 305 WHLYAIRIHPQAPLKRDDFIVRMTENGIGCSVHY-VPLHLQPYWRDRYGLTPDMYPHSQA 363
Query: 335 ASRKVLSLPVHPAVSREDLDYIIRTLEEL 363
A + SLP++ ++ D+ +I ++ +L
Sbjct: 364 AFEGMASLPIYSRMTDADVQRVIASVRQL 392
>pir||F81039 pilin glycosylation protein PglC NMB1821 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|3299890|gb|AAC25980.1| (AF014804) PglC [Neisseria
meningitidis] >gi|7227074|gb|AAF42156.1| (AE002531)
pilin glycosylation protein PglC [Neisseria meningitidis
MC58]
Length = 391
Score = 239 bits (603), Expect = 4e-62
Identities = 139/374 (37%), Positives = 213/374 (56%), Gaps = 19/374 (5%)
Query: 7 PIIEDEEINAVVNVLKSGMLAQ--GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA 64
P EE +AV VL S + G E FEKEF+ + G ++A+A+ NGT+ALDVALKA
Sbjct: 10 PCFTQEEADAVSKVLLSNKVNYWTGNECREFEKEFAAFAGTRYAVALANGTLALDVALKA 69
Query: 65 LKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILV 124
+ IG GD+VI T TF+ASA+ I+ GA PVFAD+D + N+ V +T TKA++V
Sbjct: 70 MGIGAGDDVIVTSRTFLASASCIVNAGANPVFADVDLNSQNISAETVKAALTPTTKAVIV 129
Query: 125 VHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTT 184
VHL G PA+M +A++HNL++IEDCAQAHGA+++GK VG+ G + A+SF K MTT
Sbjct: 130 VHLAGMPAEMDGIMALAKEHNLWVIEDCAQAHGAKYKGKSVGSIGHVGAWSFCQDKIMTT 189
Query: 185 -GEGGMVVTDNDELAERARLIRDHGQAE------------KYLHVELGYNYRMTNIAAAI 231
GEGGMV T++ L E+ +DHG++ ++LH G N+RM + A I
Sbjct: 190 GGEGGMVTTNDKTLWEKMWSYKDHGKSYDAVYNHEHAPGFRWLHESFGTNWRMMEMQAVI 249
Query: 232 GRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDY---P 288
GR QLK+L +W R +NA L+ + + + V + H +++ V+ ++
Sbjct: 250 GRIQLKRLPEWTARRRENAAKLAESLGKFSSIRLVEVADYIGHAQYKFYAFVKPEHLKDG 309
Query: 289 LSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGY-PRDICPNAIEASRKVLSLPVHPA 347
+RD + EL R + V+ + + + P++ NA+E L VHP
Sbjct: 310 WTRDRIVGELNARKVPCYQGSCSEVYLEKAFDNTPWRPKERLTNAVELGDTSLMFLVHPT 369
Query: 348 VSREDLDYIIRTLE 361
++ +++ + + +E
Sbjct: 370 LTDDEIAFCKKHIE 383
>gb|AAD28515.1|AF126354_1 (AF126354) BlmS [Streptomyces bluensis]
Length = 378
Score = 239 bits (603), Expect = 4e-62
Identities = 146/363 (40%), Positives = 207/363 (56%), Gaps = 18/363 (4%)
Query: 7 PIIEDEEINAVVNVLKSGMLAQG--KEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA 64
P + D +I A V L+S LA V+ FE + GV+HA+AV+ GT A+ +AL A
Sbjct: 11 PQLADNDIEAAVAALRSNRLAGSGNSTVQDFESALAAGQGVEHAVAVSTGTAAVHLALHA 70
Query: 65 LKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILV 124
L +G GDEVI TFI SA+ + + GA+PVFAD+ P T LDP+ V +T +TKAI+
Sbjct: 71 LDVGAGDEVIVPTHTFIGSASPVTYLGARPVFADVTPDTHCLDPDSVKALLTERTKAIVA 130
Query: 125 VHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTT 184
VH+ G ADM+A + + +IED AQA G G+ VG FGD+A S + K +T+
Sbjct: 131 VHINGCAADMEALSAVGAAAGVPVIEDMAQALGTRSGGRPVGGFGDLACVSLFEQKVITS 190
Query: 185 -GEGGMVVTDNDELAERARLIRDHGQAE-------KYLHVELGYNYRMTNIAAAIGRAQL 236
GEGG V+T+N AER R +R HG+ + H E+GYNYR+T++ AAIG AQ
Sbjct: 191 GGEGGAVLTNNPGYAERLRRVRSHGEGPIKGRPGLIWAH-EVGYNYRLTSVQAAIGLAQH 249
Query: 237 KKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRV---EDDYPLSRDE 293
+L + E R NA LS + + GL P H F +YV+RV E P + E
Sbjct: 250 ARLQELVEARRHNAARLSERLAGVDGLELPVEPAGTTHAFWKYVVRVVPGEGRPPAA--E 307
Query: 294 LAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDL 353
+A LR+RG+ + YP P+H QP + + + P A S+++L+LP HP + L
Sbjct: 308 IAATLRSRGVPVLLRYPFPLHKQPAFAE--HQGVSLPVAERLSQELLALPSHPGLVEGHL 365
Query: 354 DYI 356
D++
Sbjct: 366 DHV 368
>sp|P77690|YFBE_ECOLI HYPOTHETICAL 42.9 KD PROTEIN IN AIS-PMRD INTERGENIC REGION
>gi|7427875|pir||C64996 probable hydro-lyase (EC
4.2.1.-) b2253 - Escherichia coli (strain K-12)
>gi|1788587|gb|AAC75313.1| (AE000315) putative enzyme
[Escherichia coli K12] >gi|1799605|dbj|BAA16076.1|
(D90856) SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN
SPSC. [Escherichia coli]
Length = 390
Score = 236 bits (597), Expect = 2e-61
Identities = 140/380 (36%), Positives = 218/380 (56%), Gaps = 20/380 (5%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVA 61
+P ++P + EE+ AV VL+SG + G + +A E+ F + G +HAIAV++ T + +
Sbjct: 16 LPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHIT 75
Query: 62 LKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKA 121
L ALKIG+GDEVIT T++++ N I GA PV D+D T + P + IT +TKA
Sbjct: 76 LMALKIGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLMVTPEAIESAITPRTKA 135
Query: 122 ILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKN 181
I+ VH G PAD+ A R I E + + +IED A A G ++G+ +G G A FSF+ KN
Sbjct: 136 IIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKG-TAIFSFHAIKN 194
Query: 182 MTTGEGGMVVTDNDELAERARLIRDH------------GQAEKYLHVELGYNYRMTNIAA 229
+T EGG++VTDN+ LA + R+++ H G+A + + GY Y +T+I A
Sbjct: 195 ITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGYKYNLTDINA 254
Query: 230 AIGRAQLKKLDKWNEIRIKNAEILSRGIERI--KGLTPPFVDPRVKHVFHQYVIRVEDD- 286
AI QL KL+ N R + A+ + + + + L+ P P V H +H ++IRV++
Sbjct: 255 AIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLP-AWPHV-HAWHLFIIRVDEQR 312
Query: 287 YPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHP 346
+SRD L + L+ RGIGT +H+ H Y + +P PN S ++ SLP+ P
Sbjct: 313 CGISRDALMEALKERGIGTGLHFRAA--HTQKYYRERFPTLSLPNTEWNSERICSLPLFP 370
Query: 347 AVSREDLDYIIRTLEELGGE 366
++ D D++I L++L G+
Sbjct: 371 DMTTADADHVITALQQLAGQ 390
>emb|CAB62151.1| (AJ245666) putative polysaccharide biosynthesis protein
[Sinorhizobium meliloti]
Length = 386
Score = 236 bits (597), Expect = 2e-61
Identities = 139/382 (36%), Positives = 206/382 (53%), Gaps = 24/382 (6%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
MIP + I +I+AV VL+S L QG V FE +Y G K A+A + T AL V
Sbjct: 1 MIPYGRQDITQADIDAVAEVLRSDFLTQGPAVPRFENALVDYTGAKFALAANSATSALHV 60
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPND------VLEK 114
A AL +G GD + T+P TF+ASAN L+ GAK F D+DP+T+NL P V E+
Sbjct: 61 ACLALGLGPGDWLWTSPLTFVASANCALYCGAKVDFVDVDPRTYNLCPAKLERKLIVAER 120
Query: 115 ITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGT--FGDIA 172
+ K +++VH GQP + F E+ + + +IED + A G + G+ +G + D+
Sbjct: 121 DGTLPKIVVLVHFAGQPCAIAEFHELGKRYGFRIIEDASHAVGGRYRGEPIGNCRYSDVT 180
Query: 173 AFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQAEK-------------YLHVELG 219
FSF+P K +TT EGG +T++ ELAER L R HG Y VELG
Sbjct: 181 VFSFHPVKIVTTAEGGAALTNSKELAERIALFRSHGITRDPAVMTHEPDGPWYYQQVELG 240
Query: 220 YNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQY 279
YNYR+T++ AA+G +Q+ +LD++ R A + + + +T P+ P H Y
Sbjct: 241 YNYRLTDMQAALGLSQMVRLDEYVARRHTLARRYDKSLVELPVVT-PWQHPDSYSGLHLY 299
Query: 280 VIRVE-DDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRK 338
V+R+E S + LR RGIG +HY +PVH QP Y K+G+ + P A +
Sbjct: 300 VVRLERTKISKSHRAFFEGLRARGIGVNLHY-IPVHTQPYYSKMGFRKGDYPEAERYYEE 358
Query: 339 VLSLPVHPAVSREDLDYIIRTL 360
++LP++P ++ D ++ L
Sbjct: 359 AITLPLYPTMTEAQQDQVVAAL 380
>pir||S70677 probable hydro-lyase (EC 4.2.1.-) bplF protein - Bordetella
pertussis >gi|992976|emb|CAA62250.1| (X90711) gene
referred to as bplF in Mol. Microbiol. 19:37-52(1996)
[Bordetella pertussis] >gi|1589226|prf||2210367H bplF
gene [Bordetella pertussis]
Length = 395
Score = 236 bits (595), Expect = 4e-61
Identities = 143/389 (36%), Positives = 212/389 (53%), Gaps = 28/389 (7%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVK-HAIAVTNGTIALDV 60
+P A P I + EI AV ++SG L G FE+EF+ Y+G A+AV + T L +
Sbjct: 5 LPFALPDIGEAEIQAVTESMRSGWLTTGPNAREFEREFAAYIGADVEAVAVNSATAGLHL 64
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
AL+A+ +G GDEVITT TF ASA + GA+PV DIDP T + P + IT +T+
Sbjct: 65 ALEAIGVGPGDEVITTTHTFTASAEVARYLGAEPVLVDIDPATLCISPAAIERAITPRTR 124
Query: 121 AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTF-GDIAAFSFYPT 179
AI+ VH G DM + EIA H L +IED A A A ++G+++G+ D+ +SFY T
Sbjct: 125 AIVPVHYGGLSCDMDSILEIARKHGLKVIEDAAHALPASWQGRRIGSLESDLTVYSFYAT 184
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHG-------------QAEKYLHVELGYNYRMTN 226
K + TGEGGMVVT + LA+R R++R HG A Y V G+ Y MT+
Sbjct: 185 KTLATGEGGMVVTRDPALAKRCRVMRLHGIDRDAFDRFTSKKPAWYYEIVAPGFKYNMTD 244
Query: 227 IAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFV--DPRV---------KHV 275
AAA+GR QL+++ + + R + A + + PP P V +H
Sbjct: 245 TAAAMGRVQLQRVQQMRDRRAQIAAAYDQAFADLPLTLPPGPGRTPGVERVAHRDDDEHS 304
Query: 276 FHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQ-KLGYPRDICPNAIE 334
+H Y IR+ PL D+ + GIG +VHY VP+H QP ++ + G D+ P++
Sbjct: 305 WHLYAIRIHPQAPLKCDDFIVRMTENGIGCSVHY-VPLHLQPYWRDRYGLTPDMYPHSQA 363
Query: 335 ASRKVLSLPVHPAVSREDLDYIIRTLEEL 363
A + SLP++ ++ D+ +I ++ +L
Sbjct: 364 AFEGMASLPIYSRMTDADVQRVIASVRQL 392
>gb|AAB81632.1| (AF025396) putative amino transferase [Vibrio anguillarum]
Length = 371
Score = 235 bits (594), Expect = 5e-61
Identities = 144/367 (39%), Positives = 212/367 (57%), Gaps = 21/367 (5%)
Query: 10 EDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA-LKIG 68
E E +A V+ SG G EV FEKEF+ Y V+H + V NG AL + L+A +++G
Sbjct: 15 EQELKDACTRVIDSGWYILGNEVSEFEKEFAAYCNVEHCLGVANGLDALILILRAYIELG 74
Query: 69 ---QGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVV 125
+GDEVI T+IAS +I G PV + TFNLDPN + +T++TKAIL V
Sbjct: 75 VMSKGDEVIVPSNTYIASILAISEAGLVPVLVEPCEVTFNLDPNLIELAVTTRTKAILTV 134
Query: 126 HLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEG----KKVGTFGDIAAFSFYPTKN 181
HLYGQ + M ++IA HNL +IEDCAQAHGA ++ KKVG+ GD A FSFYP KN
Sbjct: 135 HLYGQVSGMDQIQKIARKHNLKVIEDCAQAHGALYDSKEGIKKVGSIGDAAGFSFYPGKN 194
Query: 182 M-TTGEGGMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLD 240
+ G+ G V T++ ELA +R++G EKY ++ G N R+ I AA+ R +L+ LD
Sbjct: 195 LGALGDAGAVTTNDPELASTISALRNYGSHEKYRNIFKGLNSRLDEIQAAMLRVKLRYLD 254
Query: 241 KWNEIRIKNAEILSRGIERIKG--LTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKEL 298
+EI ++ ++ SR + ++ + P V+ HV+H +V+ VED RD+L + L
Sbjct: 255 --DEISLRR-KVASRYLNEVRNPLIKVPLVEDDNAHVWHLFVVVVED-----RDKLVEHL 306
Query: 299 RNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIR 358
I + +HYP+P H Q Y + + P + + ++VLSLP+ + + ++D +I
Sbjct: 307 SENQIQSLIHYPIPPHKQEAYME--WNNSAFPLSEKMHKQVLSLPLSSVLDKSEIDKVID 364
Query: 359 TLEELGG 365
L G
Sbjct: 365 VLNSFLG 371
>gb|AAG17414.1|AF285970_8 (AF285970) WbgX [Plesiomonas shigelloides]
Length = 384
Score = 235 bits (593), Expect = 7e-61
Identities = 135/379 (35%), Positives = 219/379 (57%), Gaps = 18/379 (4%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVK-HAIAVTNGTIALDV 60
IP A P I +EEI V++ L+SG + G + + FE+EFS YLG ++AV + T L +
Sbjct: 5 IPFALPEIGEEEIAEVIDSLRSGWITTGPKAKQFEQEFSNYLGANVQSLAVNSATSGLHL 64
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
AL+A+ + GD+VI +TF A+A + + GA PV D+D KTFN+ + + + IT+KTK
Sbjct: 65 ALEAVGVKPGDQVIVPSYTFTATAEIVRYLGADPVIVDVDRKTFNISVDAIEKAITNKTK 124
Query: 121 AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTF-GDIAAFSFYPT 179
AI+ VH G DM + IA+ ++L ++ED A A ++G K+GT D FSFY
Sbjct: 125 AIIPVHFAGLACDMDSILSIAKKYDLKVVEDAAHAFPTTYKGSKIGTLDSDATVFSFYAN 184
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQAEK-------------YLHVELGYNYRMTN 226
K MTTGEGGMVV+ N ++ ER +++R HG + Y V G+ Y M +
Sbjct: 185 KTMTTGEGGMVVSKNKDIIERCKVMRLHGISRDAFDRYQSKTPSWFYEVVAPGFKYNMPD 244
Query: 227 IAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPF-VDPRVKHVFHQYVIRVED 285
I AAIG QL+K+D + + R + A+I ++ + P + + H +H Y IR++
Sbjct: 245 ICAAIGIHQLRKIDDFQKKRQRMAKIYDDALKELPLELPEWPTNASDIHAWHLYPIRLKT 304
Query: 286 DYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQ-KLGYPRDICPNAIEASRKVLSLPV 344
D ++RD+ K+L + GIG +VH+ +P+H QP+++ P + E +S+P+
Sbjct: 305 DSAINRDDFIKKLSDLGIGCSVHF-IPLHKQPVWRDTYNLNASDFPVSEECYLNEISIPL 363
Query: 345 HPAVSREDLDYIIRTLEEL 363
+ ++ +D ++I ++ +L
Sbjct: 364 YTKMTDQDQLFVIESIRQL 382
>gb|AAC98613.1| (AF047478) perosamine synthetase; Per [Brucella melitensis]
Length = 367
Score = 235 bits (592), Expect = 9e-61
Identities = 140/359 (38%), Positives = 202/359 (55%), Gaps = 13/359 (3%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLA-QGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
IP+ P + V L +G ++ +G+ + FE F++Y+ V A +V NGT+AL +
Sbjct: 3 IPVYSPYLCGNFKKYVNECLDTGWISSRGEFISRFEDAFAQYVDVPSAASVANGTVALHL 62
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
AL AL IG GDEVI FT+IAS N+IL GA PV+ D T +DP V IT +TK
Sbjct: 63 ALDALGIGAGDEVIVPTFTYIASVNTILQTGATPVYVDSLENTLQIDPEGVRLAITERTK 122
Query: 121 AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTK 180
A++VVHLYG P DM + REI ++ +L L+EDCA+ G +++ VGTFGD+A FSF+ K
Sbjct: 123 AVMVVHLYGHPCDMDSIREICDEKSLLLVEDCAEGFGTKWKNSHVGTFGDVATFSFFGNK 182
Query: 181 NMTTGEGGMVVTDNDELAERARLIRDHGQA--EKYLHVELGYNYRMTNIAAAIGRAQLKK 238
+TTGEGGMV+ N ++ E+ R ++ G + +Y H L YNYRMTNI AAIG +Q++
Sbjct: 183 TITTGEGGMVLARNPQVMEKCRHLKSQGTSPTREYWHDALAYNYRMTNIQAAIGLSQIEM 242
Query: 239 LDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQY-VIRVEDDYPLSRDELAKE 297
D EI A + ++ GL P + V V H Y + + D R+ L +
Sbjct: 243 AD---EILSLKARTAASYASKLAGL-PLRMHTPVGDVKHSYWMCSIVLDNSEHREPLRQH 298
Query: 298 LRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYI 356
LR G+ T +P P H P G P A S + L+LP P ++ ++ ++
Sbjct: 299 LRENGVDTRPFFP-PAHRMPHSASTG----SYPVADSLSARGLNLPSFPHITDVEISFV 352
>dbj|BAA85067.1| (AB028134) ORF7S [Shigella sonnei]
>gi|10442672|gb|AAG17424.1|AF285971_8 (AF285971) WbgX
[Shigella sonnei]
Length = 384
Score = 234 bits (591), Expect = 1e-60
Identities = 134/379 (35%), Positives = 220/379 (57%), Gaps = 18/379 (4%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVK-HAIAVTNGTIALDV 60
IP A P I +EEI V++ L+SG + G + + FE+EFS YLG ++AV + T L +
Sbjct: 5 IPFALPEIGEEEIAEVIDSLRSGWITTGPKAKQFEQEFSNYLGANVQSLAVNSATSGLHL 64
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
AL+A+ + GD+VI +TF A+A + + GA PV D+D KTFN+ + + + IT++TK
Sbjct: 65 ALEAVGVKPGDQVIVPSYTFTATAEIVRYLGADPVIVDVDRKTFNISVDAIEKAITNETK 124
Query: 121 AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTF-GDIAAFSFYPT 179
AI+ VH G DM + IA+ ++L ++ED A A ++G K+GT D FSFY
Sbjct: 125 AIIPVHFAGLACDMDSILSIAKKYDLKVVEDAAHAFPTTYKGSKIGTLDSDATVFSFYAN 184
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQAEK-------------YLHVELGYNYRMTN 226
K MTTGEGGMVV+ N ++ ER +++R HG + Y V G+ Y M +
Sbjct: 185 KTMTTGEGGMVVSKNKDIIERCKVMRLHGISRDAFDRYQSKTPSWFYEVVAPGFKYNMPD 244
Query: 227 IAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPF-VDPRVKHVFHQYVIRVED 285
I AAIG QL+K+D + + R + A+I ++ + P + + H +H Y IR++
Sbjct: 245 ICAAIGIHQLRKIDDFQKKRQRMAKIYDDALKELPLELPEWPTNASDIHAWHLYPIRLKT 304
Query: 286 DYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQ-KLGYPRDICPNAIEASRKVLSLPV 344
D ++RD+ K+L + GIG +VH+ +P+H QP+++ P + E +S+P+
Sbjct: 305 DSAINRDDFIKKLSDLGIGCSVHF-IPLHKQPVWRDTYNLNASDFPVSEECYLNEISIPL 363
Query: 345 HPAVSREDLDYIIRTLEEL 363
+ ++ +D ++I+++ +L
Sbjct: 364 YTKMTDQDQLFVIKSIRQL 382
>pir||T44515 hydro-lyase bplF protein homolog [imported] - Plesiomonas
shigelloides >gi|6009654|dbj|BAA85012.1| (AB025970)
ORF7P [Plesiomonas shigelloides]
Length = 384
Score = 233 bits (587), Expect = 3e-60
Identities = 134/379 (35%), Positives = 218/379 (57%), Gaps = 18/379 (4%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVK-HAIAVTNGTIALDV 60
IP A P I +EEI V++ L+SG + G + + FE+EFS YLG ++AV + T L +
Sbjct: 5 IPFALPEIGEEEIAEVIDSLRSGWITTGPKAKQFEQEFSNYLGANVQSLAVNSATSGLHL 64
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
AL+A+ + GD+VI +TF A+A + + GA PV D+D KTFN+ + + + IT+KTK
Sbjct: 65 ALEAVGVKPGDQVIVPSYTFTATAEIVRYLGADPVIVDVDRKTFNISVDAIEKAITNKTK 124
Query: 121 AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTF-GDIAAFSFYPT 179
AI+ VH G DM + IA+ ++L ++ED A A ++G K+GT D FSFY
Sbjct: 125 AIIPVHFAGLACDMDSILSIAKKYDLKVVEDAAHAFPTTYKGSKIGTLDSDATVFSFYAN 184
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQAEK-------------YLHVELGYNYRMTN 226
K MTTGEGGMVV+ N ++ ER +++R HG + Y V G+ Y M +
Sbjct: 185 KTMTTGEGGMVVSKNKDIIERCKVMRLHGISRDAFDRYQSKTPSWFYEVVAPGFKYNMPD 244
Query: 227 IAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPF-VDPRVKHVFHQYVIRVED 285
I AAIG QL+K+D + + R + A+I ++ + P + + H +H Y IR++
Sbjct: 245 ICAAIGIHQLRKIDDFQKKRQRMAKIYDDALKELPLELPEWPTNASDIHAWHLYPIRLKT 304
Query: 286 DYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQ-KLGYPRDICPNAIEASRKVLSLPV 344
D ++RD+ K+L + GIG +VH+ +P+H QP+++ P + +S+P+
Sbjct: 305 DSAINRDDFIKKLSDLGIGCSVHF-IPLHKQPVWRDTYNLNASDFPVSEACYLNEISIPL 363
Query: 345 HPAVSREDLDYIIRTLEEL 363
+ ++ +D ++I ++ +L
Sbjct: 364 YTKMTDQDQLFVIESIRQL 382
>pir||G72359 hypothetical protein TM0572 - Thermotoga maritima (strain MSB8)
>gi|4981089|gb|AAD35657.1|AE001732_2 (AE001732)
lipopolysaccharide biosynthesis protein, putative
[Thermotoga maritima]
Length = 383
Score = 231 bits (583), Expect = 1e-59
Identities = 128/381 (33%), Positives = 219/381 (56%), Gaps = 23/381 (6%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
MIP+++P I +++I VV VLKSG L+ G+ + F + +EY G + AV++GT AL +
Sbjct: 1 MIPLSRPDINEQDIERVVEVLKSGRLSLGEYTKRFGEMVAEYTGARFGWAVSSGTAALHL 60
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLE------- 113
L++L I +GD ++ FTFIAS N IL + A PVF D+D +T N+ P + E
Sbjct: 61 ILESLDIDEGDLILVPSFTFIASVNVILMKRAIPVFVDVDERTLNVSPETLEEAVKRCLK 120
Query: 114 -------KITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVG 166
+I K + + V ++G P D ++ + + + ++ED +A G+E++G+KVG
Sbjct: 121 GFKQGNIEIKGKPRLFMAVDVFGHPLDWDGILDVCQRYGIAVVEDSCEALGSEYKGRKVG 180
Query: 167 TFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQAEK---YLHVELGYNYR 223
TFG AF+FYP K +TTGEGG+VVT+++++ + + + G+ E HV GYNYR
Sbjct: 181 TFGVAGAFAFYPNKQITTGEGGVVVTNDEKIHTAVKSMSNQGRGEGDEWLYHVRFGYNYR 240
Query: 224 MTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV-KHVFHQYVIR 282
+ ++AA+G +Q++++D+ E R + AE S+ ++ + P V+ V K + YV+R
Sbjct: 241 IDEMSAALGCSQMERIDEIVEKRAEAAERYSKMLKEFSWVKVPVVEDYVTKMSWFVYVVR 300
Query: 283 VEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKL-GYPRDICPNAIEASRKVLS 341
+E R+ + + + +G+ +Y PVH QP Y+KL G + + P S K L+
Sbjct: 301 LEGP---DRNRVMRYMEEKGVQVR-NYFYPVHFQPFYEKLFGSMKGLLPVTERESEKTLA 356
Query: 342 LPVHPAVSREDLDYIIRTLEE 362
+P +++ + ++ L E
Sbjct: 357 IPFFTSITESEQKTVVEILRE 377
>pir||E83251 probable aminotransferase WbpE PA3155 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949270|gb|AAG06543.1|AE004739_5 (AE004739) probable
aminotransferase WbpE [Pseudomonas aeruginosa]
Length = 359
Score = 231 bits (582), Expect = 1e-59
Identities = 128/353 (36%), Positives = 204/353 (57%), Gaps = 10/353 (2%)
Query: 9 IEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIG 68
I+D+ + VL+ G G EV E ++++G K+ I+ NGT AL + AL +G
Sbjct: 14 IKDKIDAGIQRVLRHGQYILGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVG 73
Query: 69 QGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLY 128
GDEVIT FT++A+A ++ GAKPV+ DIDP+T+NLDP + IT +TKAI+ V LY
Sbjct: 74 PGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAIIPVSLY 133
Query: 129 GQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEG 187
GQ AD A IA + + +IED AQ+ GA ++GK+ +A SF+P+K + G+G
Sbjct: 134 GQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSKPLGCYGDG 193
Query: 188 GMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRI 247
G + T++DELA R I HGQ +Y H+ +G N R+ + AAI +L+ ++ +R
Sbjct: 194 GAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQ 253
Query: 248 KNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAV 307
K A ++++ G+ PF++ V+ QY +R++ +R+ + L+ G+ TAV
Sbjct: 254 KVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD-----NRESVQASLKAAGVPTAV 307
Query: 308 HYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTL 360
HYP+P++ QP + + P +A+ +V+SLP+HP + + I L
Sbjct: 308 HYPIPLNKQP---AVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAAL 357
>pir||T30592 conserved hypothetical protein PCZA361.5 - Amycolatopsis orientalis
>gi|2894175|emb|CAA11782.1| (AJ223998) PCZA361.5
[Amycolatopsis orientalis]
Length = 369
Score = 228 bits (576), Expect = 6e-59
Identities = 134/352 (38%), Positives = 198/352 (56%), Gaps = 8/352 (2%)
Query: 14 INAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEV 73
++AV V SG L G V FE EF+ Y GV+H +++ NGT A+ + L+AL +G GDEV
Sbjct: 20 LDAVETVFNSGQLVLGASVRGFEAEFAAYHGVEHCVSLDNGTNAIKLGLQALGVGPGDEV 79
Query: 74 ITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPAD 133
IT T + +I GA PVF D+ F +D + V IT +TK +L VHLYGQ +
Sbjct: 80 ITVSNTAAPTVVAIDGTGATPVFVDVREDDFLMDTSQVAAAITDRTKCLLPVHLYGQCVN 139
Query: 134 MKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGMVVT 192
M +E+A H L ++EDCAQAHGA G G+ GD AAFSFYPTK + G+GG +T
Sbjct: 140 MAPLKELATKHGLSILEDCAQAHGARQNGTIAGSTGDAAAFSFYPTKVLGAYGDGGATIT 199
Query: 193 DNDELAERARLIRDHGQAEKYLHVEL-GYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAE 251
+ + +R R +R +G + Y VE +N R+ + A I R +LK+LD + R A+
Sbjct: 200 SDQSVEQRLRRLRYYGMEKTYYTVETPAHNSRLDEVQAEILRRKLKRLDTYTAGRRAIAQ 259
Query: 252 ILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPV 311
G+ + L P P +HV++ YV+R +P RD++ + L+ I + YP
Sbjct: 260 RYVDGLGDTE-LKLPQTVPGNEHVYYVYVVR----HP-RRDDIIERLKAYDIHLNISYPW 313
Query: 312 PVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEEL 363
PVH + KLGY P ++++ SLP++PA+S + D +I + E+
Sbjct: 314 PVHTMTGFAKLGYAEGSLPVTERLAKEIFSLPMYPALSADLQDKVIHAVREV 365
>pir||C83201 conserved hypothetical protein PA3552 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949704|gb|AAG06940.1|AE004776_3 (AE004776)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 382
Score = 228 bits (574), Expect = 1e-58
Identities = 138/379 (36%), Positives = 216/379 (56%), Gaps = 24/379 (6%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVA 61
+P ++P I ++EI AV VL+SG + G + + E+ F+E LG +HA+A+++ T AL V
Sbjct: 6 LPFSRPSIGEDEIAAVEQVLRSGWITTGPKNQELEQRFAERLGCRHAVALSSATGALHVT 65
Query: 62 LKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKA 121
L AL IG GDEVIT T++++AN I GA PVF D+D T V I +T+A
Sbjct: 66 LLALGIGPGDEVITPSLTWVSTANVITLLGATPVFVDVDRDTLMCSAQAVEAAIGPRTRA 125
Query: 122 ILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKN 181
I+ VH G D++ R +A H + L+ED A A G+E+ G+ VG+ G A FSF+ KN
Sbjct: 126 IVPVHYAGSTLDLEGLRTVAGRHGIALVEDAAHAVGSEYRGRPVGSRG-TAIFSFHAIKN 184
Query: 182 MTTGEGGMVVTDNDELAERARLIRDHGQA----EKYLH--------VELGYNYRMTNIAA 229
+T EG M V+D+ LAER R ++ HG ++ H +E G+ Y + ++ A
Sbjct: 185 LTCAEGAMFVSDDSALAERVRRLKFHGLGVDAYDRLSHGRKPQAEVIEPGFKYNLADLNA 244
Query: 230 AIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGL-TPPFVDP--RVKHVFHQYVIRVEDD 286
A+ QLK+LD N R AE R +ER+ GL P P + +H +H +++R++ +
Sbjct: 245 ALALVQLKRLDALNARRQALAE---RYLERLAGLPLAPLGLPAHKQRHAWHLFILRIDAE 301
Query: 287 Y-PLSRDELAKELRNRGIGTAVHYPVP-VHHQPLYQKLGYPRDICPNAIEASRKVLSLPV 344
L RD + L+ RGIG+ +H+ +HH Y + PR PN+ S ++ S+P+
Sbjct: 302 VCGLGRDAFMEALKARGIGSGIHFIASHLHH---YYRQRQPRLSLPNSEWNSARLCSIPL 358
Query: 345 HPAVSREDLDYIIRTLEEL 363
P + +D++ + R +EE+
Sbjct: 359 FPDMRDDDIERVARAIEEI 377
>emb|CAA07669.1| (AJ007747) putative amino-sugar biosynthesis protein [Bordetella
bronchiseptica]
Length = 366
Score = 226 bits (570), Expect = 3e-58
Identities = 131/345 (37%), Positives = 189/345 (53%), Gaps = 7/345 (2%)
Query: 20 VLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFT 79
VL G G EV+ E Y G KH I V +GT AL ++L AL + GDEVITT FT
Sbjct: 24 VLDHGQFIMGPEVKELEAALCAYTGAKHCITVASGTEALLISLMALGVKAGDEVITTSFT 83
Query: 80 FIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFRE 139
F+A+A I GAKPVF D++P T N+ +++ KIT +TKAI+ V LYGQ DM
Sbjct: 84 FVATAEVIALLGAKPVFVDVEPDTCNIKVSEIEAKITPRTKAIIPVSLYGQCGDMDEVNA 143
Query: 140 IAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGMVVTDNDELA 198
+A H L +IED AQ+ GA ++G+K I SF+P+K + G+GG + T++DELA
Sbjct: 144 VAAKHGLPVIEDAAQSFGATYKGRKSCNLSTIGCTSFFPSKPLGCYGDGGALFTNDDELA 203
Query: 199 ERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIK-NAEILSRGI 257
+ R IR HGQ+ +Y H +G RM + A+ +L++ D RIK A
Sbjct: 204 QAMREIRVHGQSGRYYHTRIGVGGRMDTLQCAVVLGKLERFDWEIAQRIKIGARYQQLLA 263
Query: 258 ERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQP 317
+ G V P V+ Q+ + V +R+ + +L+ GI TAVHYP P+H QP
Sbjct: 264 DLPGGACTVTVRPDRDSVWAQFTVMVP-----NREAVIAQLKEAGIPTAVHYPRPIHAQP 318
Query: 318 LYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEE 362
Y++ P + + + +V+SLP+HP + D I+ L +
Sbjct: 319 AYEQYAEGAGATPVSDDLAARVMSLPMHPDLDEATQDKIVAALRQ 363
>pir||S70674 probable hydro-lyase (EC 4.2.1.-) bplC protein - Bordetella
pertussis >gi|992973|emb|CAA62247.1| (X90711) gene
referred to as bplC in Mol. Microbiol. 19:37-52(1996)
[Bordetella pertussis] >gi|1589223|prf||2210367E bplC
gene [Bordetella pertussis]
Length = 366
Score = 226 bits (569), Expect = 4e-58
Identities = 131/345 (37%), Positives = 189/345 (53%), Gaps = 7/345 (2%)
Query: 20 VLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFT 79
VL G G EV+ E Y G KH I V +GT AL ++L AL + GDEVITT FT
Sbjct: 24 VLDHGQFIMGPEVKELEAALCAYTGAKHCITVASGTEALLISLMALGVKAGDEVITTSFT 83
Query: 80 FIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFRE 139
F+A+A I GAKPVF D++P T N+ +++ KIT +TKAI+ V LYGQ DM
Sbjct: 84 FVATAEVIALLGAKPVFVDVEPDTCNIKVSEIEAKITPRTKAIIPVSLYGQCGDMDEVNA 143
Query: 140 IAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGMVVTDNDELA 198
+A H L +IED AQ+ GA ++G+K I SF+P+K + G+GG + T++DELA
Sbjct: 144 VAARHGLPVIEDAAQSFGATYKGRKSCNLSTIGCTSFFPSKPLGCYGDGGALFTNDDELA 203
Query: 199 ERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIK-NAEILSRGI 257
+ R IR HGQ+ +Y H +G RM + A+ +L++ D RIK A
Sbjct: 204 QAMREIRVHGQSGRYYHARIGVGGRMDTLQCAVVLGKLERFDWEIAQRIKIGARYQQLLA 263
Query: 258 ERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQP 317
+ G V P V+ Q+ + V +R+ + +L+ GI TAVHYP P+H QP
Sbjct: 264 DLPGGACTVTVRPDRDSVWAQFTVMVP-----NREAVIAQLKEAGIPTAVHYPRPIHAQP 318
Query: 318 LYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEE 362
Y++ P + + + +V+SLP+HP + D I+ L +
Sbjct: 319 AYEQYAEGAGATPVSDDLAARVMSLPMHPDLDEATQDKIVAALRQ 363
>pir||G70448 transcription regulator DegT/DnrJ/Eryc1 family - Aquifex aeolicus
>gi|2984039|gb|AAC07581.1| (AE000753) transcriptional
regulator (DegT/DnrJ/Eryc1 family) [Aquifex aeolicus]
Length = 346
Score = 225 bits (567), Expect = 7e-58
Identities = 130/364 (35%), Positives = 211/364 (57%), Gaps = 23/364 (6%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVA 61
IPI +EE A+ +L+S + + + F++ F+E+L VK+ V +GT+AL +
Sbjct: 3 IPIIGLEFSEEEKKALTEILESKRITRDGWTDTFQEAFAEFLNVKYCATVCSGTVALFIG 62
Query: 62 LKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITS-KTK 120
LKAL I G++V+ +F+A+ +++L G PV D+D + + +D N + + + + +
Sbjct: 63 LKALGIRNGEKVVIPAMSFMATIDAVLLAGGIPVVVDVD-EYYTMDVNQLEDAVKKYRPR 121
Query: 121 AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTK 180
++ VHLYGQPADM+ +A+ + +++EDCAQAHGAEF+GKKVG +G ++AFSFY +K
Sbjct: 122 VVIPVHLYGQPADMENIMFLADRYGFFVLEDCAQAHGAEFKGKKVGAWGHLSAFSFYASK 181
Query: 181 NMTTGEGGMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLD 240
N+ GEGG + T+++ L + + D G+ +N ++T AAIG QL+KL
Sbjct: 182 NVPMGEGGALTTNDESLFKEVKKWIDFGE-------HPAFNVKITEFQAAIGTLQLRKLK 234
Query: 241 KWNEIRIKNAEILSRGIERIKGLTP-PFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELR 299
+ NE R A I + E +KGL P HV+H Y +R ++ RD L + LR
Sbjct: 235 ERNERRRNIARIYT---ENLKGLCEVPEEREGAYHVYHLYTLRHKE-----RDRLVEHLR 286
Query: 300 NRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRT 359
++GI V+Y +H + L P+ A R+V S+PVHP + E++ YII +
Sbjct: 287 SKGIDARVYYTYLLHELRNAEALPTPK-----AERFKREVFSIPVHPFLKEEEVLYIIES 341
Query: 360 LEEL 363
L+E+
Sbjct: 342 LKEV 345
>gb|AAG13910.1|AF263245_6 (AF263245) TDP-3-keto-6-deoxyhexose 3-aminotransaminase
[Micromonospora megalomicea subsp. nigra]
Length = 374
Score = 225 bits (567), Expect = 7e-58
Identities = 137/356 (38%), Positives = 203/356 (56%), Gaps = 11/356 (3%)
Query: 14 INAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEV 73
++AV V SG L G+ VE FE E++ Y G+ H + V NGT A+ +AL+++ +G+ DEV
Sbjct: 20 LDAVQKVFASGSLILGQSVENFETEYARYHGIAHCVGVDNGTNAVKLALESVGVGRDDEV 79
Query: 74 ITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPAD 133
+T T + +I GA+PVF D+ + + +D + V +T +TKAI+ VHLYGQ D
Sbjct: 80 VTVSNTAAPTVLAIDEIGARPVFVDVRDEDYLMDTDLVEAAVTPRTKAIVPVHLYGQCVD 139
Query: 134 MKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGMVVT 192
M A RE+A+ L L+EDCAQAHGA +G+ GT D AAFSFYPTK + G+GG VVT
Sbjct: 140 MTALRELADRRGLKLVEDCAQAHGARRDGRLAGTMSDAAAFSFYPTKVLGAYGDGGAVVT 199
Query: 193 DNDELAERARLIRDHGQAEKYLHVEL-GYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAE 251
++DE A R +R +G E Y G+N R+ + A I R +L +LD + R A+
Sbjct: 200 NDDETARALRRLRYYGMEEVYYVTRTPGHNSRLDEVQAEILRRKLTRLDAYVAGRRAVAQ 259
Query: 252 ILSRGIERIK---GLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRN-RGIGTAV 307
G+ ++ GL P V +HVF+ YV+R +P RDE+ K LR+ I +
Sbjct: 260 RYVDGLADLQDSHGLELPVVTDGNEHVFYVYVVR----HP-RRDEIIKRLRDGYDISLNI 314
Query: 308 HYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEEL 363
YP PVH + LG P + ++ SLP++P++ + D +I + E+
Sbjct: 315 SYPWPVHTMTGFAHLGVASGSLPVTERLAGEIFSLPMYPSLPHDLQDRVIEAVREV 370
>pir||S44965 probable hydro-lyase (EC 4.2.1.-) lmbS - Streptomyces lincolnensis
>gi|581695|emb|CAA55764.1| (X79146) lmbS [Streptomyces
lincolnensis]
Length = 382
Score = 223 bits (562), Expect = 3e-57
Identities = 138/379 (36%), Positives = 205/379 (53%), Gaps = 18/379 (4%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVA 61
IP A P + E AV+ V++SG ++ G E ++FE+EF+ Y+GV HA+A+T+ T AL VA
Sbjct: 5 IPFAAPCFDTAEEEAVLRVVRSGWVSTGAEAQSFEEEFAAYIGVAHAVALTSCTAALHVA 64
Query: 62 LKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKA 121
LKA IG GDEVI TF+A+A S++ GA PV AD+ P+ DP+ V IT +TKA
Sbjct: 65 LKAYGIGPGDEVIVPTMTFVATATSVVHAGAAPVLADVGPEHLTFDPDQVKSLITERTKA 124
Query: 122 ILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKN 181
++ VHL+G+ A M+ RE+ + H L L+ED A A G GD +AFSF+ TK
Sbjct: 125 VVPVHLFGRMAAMEPLRELCDSHGLTLLEDAAHTLPARDGDAVAGRAGDASAFSFFATKP 184
Query: 182 MTTGEGGMVVTDNDELAERARLIRDH------------GQAEKYLHVELGYNYRMTNIAA 229
+TT EGGM+ TD+ +A+ AR H G + Y G+ Y M+++AA
Sbjct: 185 ITTAEGGMLCTDDARVADEARRWSLHGLSRGAVNRYRPGHSAAYDVDRPGHKYNMSDLAA 244
Query: 230 AIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV-KHVFHQYVIRVEDDYP 288
A+GRAQL K + + R AE+ R + + L P D + ++ + +RV
Sbjct: 245 ALGRAQLAKAGRLHARRTAIAEVYLRELAGLDRLELPAADTATNRSSWYLFPVRVHGH-- 302
Query: 289 LSRDELAKELRNRGIGTAVHYPVPVHHQP-LYQKLGYPRDICPNAIEASRKVLSLPVHPA 347
RD + L G+GT+VH+ P+H L + P A A+ ++SLPV PA
Sbjct: 303 -RRDAFRQRLHALGVGTSVHFE-PLHRFTWLRDHVVRTGQGFPVADAAADTLVSLPVFPA 360
Query: 348 VSREDLDYIIRTLEELGGE 366
+ + ++ + E
Sbjct: 361 MDDAAVSRVVAAVRRAHDE 379
>sp|P25048|DNRJ_STRPE DAUNORUBICIN BIOSYNTHESIS SENSORY TRANSDUCTION PROTEIN DNRJ
>gi|153244|gb|AAA26737.1| (M80237) dnrJ [Streptomyces
peucetius]
Length = 370
Score = 222 bits (561), Expect = 4e-57
Identities = 133/354 (37%), Positives = 198/354 (55%), Gaps = 7/354 (1%)
Query: 14 INAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEV 73
++AV V +SG L G V +FE+EF+ Y G+ + V NGT AL + L+AL IG GDEV
Sbjct: 20 LDAVETVFESGQLILGTSVRSFEEEFAAYHGLPYCTGVDNGTNALVLGLRALGIGPGDEV 79
Query: 74 ITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPAD 133
+T T + +I GA PVF D+ + + +D + I +T+ +L VHLYGQ D
Sbjct: 80 VTVSNTAAPTVVAIDAVGATPVFVDVHEENYLMDTGRLRSVIGPRTRCLLPVHLYGQSVD 139
Query: 134 MKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGMVVT 192
M E+A +H+L ++EDCAQAHGA G+ VGT G AAFSFYPTK + G+GG VVT
Sbjct: 140 MTPVLELAAEHDLKVLEDCAQAHGARRHGRLVGTQGHAAAFSFYPTKVLGAYGDGGAVVT 199
Query: 193 DNDELAERARLIRDHGQAEKYLHVEL-GYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAE 251
+ E+ R R +R +G E+Y V+ G+N R+ + A I R +L++LD + E R A
Sbjct: 200 PDAEVDRRLRRLRYYGMGERYYVVDTPGHNSRLDEVQAEILRRKLRRLDAYVEGRRAVAR 259
Query: 252 ILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPV 311
G+ + GL P + HV++ YV+R +P RD + + L I + YP
Sbjct: 260 RYEEGLGDLDGLVLPTIAEGNDHVYYVYVVR----HP-ERDRILEALTAYDIHLNISYPW 314
Query: 312 PVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEELGG 365
PVH + LGY P + ++ SLP++P++ + + +I + E+ G
Sbjct: 315 PVHTMSGFAHLGYGPGDLPVTERLAGEIFSLPMYPSLRPDAQEKVIDAVREVVG 368
>pir||B43306 probable hydro-lyase (EC 4.2.1.-) dnrJ - Streptomyces peucetius
Length = 370
Score = 222 bits (561), Expect = 4e-57
Identities = 133/354 (37%), Positives = 198/354 (55%), Gaps = 7/354 (1%)
Query: 14 INAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEV 73
++AV V +SG L G V +FE+EF+ Y G+ + V NGT AL + L+AL IG GDEV
Sbjct: 20 LDAVETVFESGQLILGTSVRSFEEEFAAYHGLPYCTGVDNGTNALVLGLRALGIGPGDEV 79
Query: 74 ITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPAD 133
+T T + +I GA PVF D+ + + +D + I +T+ +L VHLYGQ D
Sbjct: 80 VTVSNTAAPTVVAIDAVGATPVFVDVHEENYLMDTGRLRSVIGPRTRCLLPVHLYGQSVD 139
Query: 134 MKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGMVVT 192
M E+A +H+L ++EDCAQAHGA G+ VGT G AAFSFYPTK + G+GG VVT
Sbjct: 140 MTPVLELAAEHDLKVLEDCAQAHGARRHGRLVGTQGHAAAFSFYPTKVLGAYGDGGAVVT 199
Query: 193 DNDELAERARLIRDHGQAEKYLHVEL-GYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAE 251
+ E+ R R +R +G E+Y V+ G+N R+ + A I R +L++LD + E R A
Sbjct: 200 PDAEVDRRLRRLRYYGMGERYYVVDTPGHNSRLDEVQAEILRRKLRRLDAYVEGRRAVAR 259
Query: 252 ILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPV 311
G+ + GL P + HV++ YV+R +P RD + + L I + YP
Sbjct: 260 RYEEGLGDLDGLVLPTIAEGNDHVYYVYVVR----HP-ERDRILEALTAYDIHLNISYPW 314
Query: 312 PVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEELGG 365
PVH + LGY P + ++ SLP++P++ + + +I + E+ G
Sbjct: 315 PVHTMSGFAHLGYGPGDLPVTERLAGEIFSLPMYPSLRPDAQEKVIDAVREVVG 368
>pir||S49052 probable hydro-lyase (EC 4.2.1.-) tylB - Streptomyces fradiae
(strain T59235) >gi|473598|gb|AAA21342.1| (U08223)
unknown [Streptomyces fradiae]
Length = 388
Score = 222 bits (559), Expect = 6e-57
Identities = 141/362 (38%), Positives = 200/362 (54%), Gaps = 18/362 (4%)
Query: 9 IEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIG 68
+E E A++ V G G E+ AFE+ F+EY G H +AV +G +AL AL +G
Sbjct: 25 VESEIGGALLRVAARGRYLLGAELAAFEERFAEYCGNAHCVAVGSGLDDARLALWALGVG 84
Query: 69 QGDEVITTPFTFIASANSILFQGAKPVFADID------PKTFNLDPNDVLEKITSKTKAI 122
+GDEVI TFIAS ++ GA PV + P F LDP+ + +T +T+A+
Sbjct: 85 EGDEVIVPSHTFIASWLAVSATGATPVPVEPGDPGEPGPGAFLLDPDRLEAALTPRTRAV 144
Query: 123 LVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM 182
+ VHLYG P D+ AE H L ++ED AQA A + G+++G+ G AFSFYP KN+
Sbjct: 145 MPVHLYGHPVDLDPVGAFAEPHGLAVVEDAAQAT-ARYRGRRIGS-GHRTAFSFYPGKNL 202
Query: 183 -TTGEGGMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDK 241
G+GG VVT + ELA+R RL+R++G EKY H E G N R+ + AA+ +L LD
Sbjct: 203 GALGDGGAVVTSDPELADRLRLLRNYGAREKYRHEERGTNSRLDELQAAVLSVKLPYLDA 262
Query: 242 WNEIRIKNAEILSRGIERIKGLTPPFVDPRV-KHVFHQYVIRVEDDYPLSRDELAKELRN 300
WN R + A + + G+T P + RV + V+HQYV+R RD L + L
Sbjct: 263 WNTRRREIAARYGEALAGLPGVTVP--EGRVAEPVWHQYVLRSP-----YRDRLRRRLAE 315
Query: 301 RGIGTAVHYPVPVHHQPLYQKLG-YPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRT 359
G+ T VHYPV VH Y G P P A + +VLSLP+ P + E ++ +I
Sbjct: 316 AGVETLVHYPVAVHASGAYAGAGPCPAGGLPRAERLAGEVLSLPIGPHLPDEAVEVVIAA 375
Query: 360 LE 361
++
Sbjct: 376 VQ 377
>pir||T44839 probable amino-transferase [imported] - Acinetobacter lwoffii
>gi|6010000|emb|CAB57207.1| (AJ243431) putative
amino-transferase [Acinetobacter lwoffii]
Length = 391
Score = 221 bits (558), Expect = 8e-57
Identities = 133/376 (35%), Positives = 207/376 (54%), Gaps = 19/376 (5%)
Query: 7 PIIEDEEINAVVNVLKSGMLAQ--GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA 64
P EE +AV +VL S + G+E FEKEF+ + G ++A+A+TNGT+ALDVALKA
Sbjct: 10 PSFTQEEADAVKDVLLSNKVNYWTGQECREFEKEFATFAGTQYAVALTNGTVALDVALKA 69
Query: 65 LKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILV 124
L IG GD+VI T TF+ASA+SI+ GA P+FAD++ + N+ + +T +TKAI+
Sbjct: 70 LGIGAGDDVIVTSRTFLASASSIVTAGANPIFADVELDSQNISRATIEAVLTPRTKAIIC 129
Query: 125 VHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTT 184
VHL G DM ++AE+ LY+IEDCAQAHGA+++GK G+ G I+A+SF K MTT
Sbjct: 130 VHLAGWMCDMNPIMQLAEEKGLYVIEDCAQAHGAQYKGKPAGSIGHISAWSFCQDKIMTT 189
Query: 185 -GEGGMVVTDNDELAERARLIRDHGQ------------AEKYLHVELGYNYRMTNIAAAI 231
GEGGMV T+++ L ++ +DHG+ ++LH G N+RM + A I
Sbjct: 190 GGEGGMVTTNDESLWKKMWSYKDHGKNFDSIYNKQHPPGFRWLHDSFGTNWRMMEMQAVI 249
Query: 232 GRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVE---DDYP 288
GR QL ++ +W + R +NAE + + T H ++ ++V
Sbjct: 250 GRIQLTRMAEWTQKRTENAEKILKAFADSPYFTVHLPSNDYVHAHYKCYVQVNLAALPEG 309
Query: 289 LSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGY-PRDICPNAIEASRKVLSLPVHPA 347
SRD + +E+ ++ + V+ + + + P NA + L VHP
Sbjct: 310 WSRDRIMQEINSQNVPCFSGSCSEVYLEHAFDNTPWRPEQRLENAQQLGETSLMFLVHPT 369
Query: 348 VSREDLDYIIRTLEEL 363
+S + + + ++ +
Sbjct: 370 LSEDSITKTVVAIQNV 385
>gb|AAF73462.1|AF264025_13 (AF264025) putative aminotransferase; AknZ [Streptomyces galilaeus]
Length = 341
Score = 218 bits (550), Expect = 7e-56
Identities = 127/319 (39%), Positives = 179/319 (55%), Gaps = 8/319 (2%)
Query: 14 INAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEV 73
++AV V SG L G V FE+EF+ Y G H + V NGT A+ +AL+AL +G GDEV
Sbjct: 20 LDAVETVFSSGRLVLGDSVRGFEEEFAAYHGAAHCVGVDNGTNAIKLALQALGVGPGDEV 79
Query: 74 ITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPAD 133
+T T + +I GA PVF D+ P ++ +D V +T +T+ +L VHLYGQ D
Sbjct: 80 VTVSNTAAPTVVAIDSVGATPVFVDVHPDSYLMDTEQVEAALTPRTRCLLPVHLYGQCVD 139
Query: 134 MKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEGGMVVT 192
+ +A +H+L+L+EDCAQAHGA G+ GT GD AAFSFYPTK + G+GG VVT
Sbjct: 140 LAPLERLAAEHDLFLVEDCAQAHGARRAGRLAGTTGDAAAFSFYPTKVLGAYGDGGAVVT 199
Query: 193 DNDELAERARLIRDHGQAEKYLHVEL-GYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAE 251
D+ R +R +G E+Y V G+N R+ + A I R +L++LD + E R A
Sbjct: 200 SRDDTHRALRRLRYYGMEERYYVVGTPGHNARLDEVQAEILRRKLRRLDTYIEGRRAVAR 259
Query: 252 ILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPV 311
G+ GL P P +HV++ Y +R +P RD++ K L+ I + YP
Sbjct: 260 RYEDGLGD-TGLVLPHTVPGNEHVYYVYTVR----HP-RRDDIIKALKAYDIELNISYPW 313
Query: 312 PVHHQPLYQKLGYPRDICP 330
PVH + LGY + P
Sbjct: 314 PVHTMSGFAHLGYGKGSLP 332
>gb|AAB81626.1| (AF025396) probable perosamine synthetase [Vibrio anguillarum]
Length = 369
Score = 218 bits (549), Expect = 9e-56
Identities = 134/369 (36%), Positives = 215/369 (57%), Gaps = 16/369 (4%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLAQGKE-VEAFEKEFSEYLGVKHAIAVTNGTIALD 59
MI A P I ++EI+ V + +K+G + FEK ++Y+GVKH+++ ++ T AL
Sbjct: 5 MILTAGPSITEKEISYVTDAVKNGWNNNWNNYLLKFEKSLADYVGVKHSLSTSSATGALH 64
Query: 60 VALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT 119
+++ A IG GDEVI +++ASA+++ + GA PVF DIDP ++ LD +T KT
Sbjct: 65 LSMLACGIGPGDEVIVPEISWVASASAVAYVGATPVFCDIDPVSWCLDIESAARLLTPKT 124
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
KAIL VH+YG PA+M A E A +N+ +IED A + GAE +GKK G+FGD AAFSF
Sbjct: 125 KAILPVHIYGHPANMPAIMEFARANNILIIEDAAPSIGAEVDGKKTGSFGDAAAFSFQGA 184
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQ--AEKYLHVELGYNYRMTNIAAAIGRAQLK 237
K ++TGEGGM V++NDE+ R + + DHG+ ++ + VE+GY Y+M+N+ AA+G AQ++
Sbjct: 185 KILSTGEGGMFVSNNDEIFNRVKSLNDHGRDPSQPFASVEVGYKYKMSNLQAAMGLAQIE 244
Query: 238 KLDKWNEIRIKNAEILSRGIERIKGLTPPFVD---PRVKHVFHQYVIRVED-DYPLSRDE 293
+++ E+ K EI S E +K T V P K + + + DY R
Sbjct: 245 RVE---ELVNKKREINSIYQELLKDCTAVKVTTELPDCKSIHWMTSVELLGFDYD-KRQR 300
Query: 294 LAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDL 353
+LR + + + P+ P+++ PR P A+ + ++LP + E L
Sbjct: 301 FMGKLRENLVDSRPVFS-PLSSLPMFE----PRVKNPVALRIGQSAINLPSGHNLILEQL 355
Query: 354 DYIIRTLEE 362
+++ T+++
Sbjct: 356 EHVATTIKK 364
>gb|AAC62518.1| (U27301) FLAA2 protein [Caulobacter crescentus]
Length = 386
Score = 217 bits (548), Expect = 1e-55
Identities = 134/385 (34%), Positives = 210/385 (53%), Gaps = 25/385 (6%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVA 61
+P + IE+++I AV L+ L G VEAFE F+ +G HAIAV+NGT L +A
Sbjct: 6 LPYGRQTIEEDDIAAVAEALRGDFLTTGPTVEAFETAFAAKVGADHAIAVSNGTATLHLA 65
Query: 62 LKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKIT----S 117
+ AL IG+GD + TF+A+AN + GA+ VFAD+DP + + P+ + +
Sbjct: 66 MMALGIGEGDVCVAPSVTFLATANCARYVGAEVVFADVDPDSGLMTPDTLARALAGARDK 125
Query: 118 KTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHG--AEFEGKK----VGTFGDI 171
+ KA+L VHL G D+ A + +A L+ED A G A F+G G +
Sbjct: 126 RVKAVLPVHLRGDVCDLPALKAMASASGAVLVEDAPHALGSIATFDGVAHPVGDGAYSSF 185
Query: 172 AAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQAEK-------YLHVELGYNYRM 224
A+FSF+P K + TGEGGM+ T++ LA +ARL+R HG + Y ELG+NYR+
Sbjct: 186 ASFSFHPVKTLATGEGGMLTTNDPALAAKARLLRSHGMVRQPGGDPWWYEMPELGFNYRI 245
Query: 225 TNIAAAIGRAQLKKLDKW----NEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYV 280
++ A+G +QL KLD++ ++ A +L+ R + T P H+ +
Sbjct: 246 PDVLCALGLSQLAKLDRFVARRRDLTALYARLLAERAPRARLATSPDHSDAALHLL-TVL 304
Query: 281 IRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVL 340
I E + +SR + + L+ +G+GT VHY +PVH QP Y + D+ P A + L
Sbjct: 305 IDFEAE-GISRRTVVESLKTQGVGTQVHY-IPVHRQPYYAQRYGVADL-PGADAWYARCL 361
Query: 341 SLPVHPAVSREDLDYIIRTLEELGG 365
+LP++PA++ D++ ++ L + G
Sbjct: 362 TLPLYPAMTNGDVERVVGALATVLG 386
>gb|AAC04770.1| (AF036677) unknown [Salmonella typhimurium]
Length = 385
Score = 217 bits (548), Expect = 1e-55
Identities = 127/378 (33%), Positives = 203/378 (53%), Gaps = 16/378 (4%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVA 61
+P ++P + EE+ AV VL SG + G + + E F G ++A+AV++ T + +A
Sbjct: 11 LPFSRPAMGAEELAAVKTVLDSGWITTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIA 70
Query: 62 LKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKA 121
L AL IG+GDEVIT T++++ N I+ GA PV D+D T + P + IT +TKA
Sbjct: 71 LMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKA 130
Query: 122 ILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKN 181
I+ VH G PAD+ A + E + + +IED A A G ++G+ +G G A FSF+ KN
Sbjct: 131 IIPVHYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARG-TAIFSFHAIKN 189
Query: 182 MTTGEGGMVVTDNDELAERARLIRDH------------GQAEKYLHVELGYNYRMTNIAA 229
+T EGG+VVTDN + A++ R ++ H G+A + + GY Y + ++ A
Sbjct: 190 ITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNA 249
Query: 230 AIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVED-DYP 288
AI AQL+KLD N R A + + + H +H ++IRV++
Sbjct: 250 AIALAQLQKLDALNARRAAIAAQYHQAMADLPFQPVSLPSWEHIHAWHLFIIRVDEARCG 309
Query: 289 LSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAV 348
++RD L L+ +GIGT +H+ H Y + +P P+ S ++ SLP+ P +
Sbjct: 310 ITRDALMASLKTKGIGTGLHFRAA--HTQKYYRERFPTLTLPDTEWNSERICSLPLFPDM 367
Query: 349 SREDLDYIIRTLEELGGE 366
+ D D +I L ++ G+
Sbjct: 368 TESDFDRVITALHQIAGQ 385
>gb|AAF01821.1|AF187532_17 (AF187532) putative aminotransferase [Streptomyces nogalater]
Length = 342
Score = 217 bits (546), Expect = 2e-55
Identities = 130/326 (39%), Positives = 188/326 (56%), Gaps = 10/326 (3%)
Query: 9 IEDEEIN-AVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKI 67
+E E+I+ AV V +SG L G+ V FE EF+ + GV HA+ V NGT A+ + L+AL +
Sbjct: 14 LEREDIHDAVETVFRSGRLVLGESVRGFESEFASFQGVGHAVGVDNGTNAVKLGLQALGV 73
Query: 68 GQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHL 127
G GDEV+T T + +I GA PVF D+ + + +D + V +T +T+ +L VHL
Sbjct: 74 GPGDEVVTVSNTAAPTVVAIDSAGATPVFVDVREEDYLMDTSQVEAVLTPRTRCLLPVHL 133
Query: 128 YGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGE 186
YGQ DM R++A HNL ++EDCAQAHGA G+ G+ GD AAFSFYPTK + G+
Sbjct: 134 YGQCVDMAPLRDLAARHNLVILEDCAQAHGARRHGRLAGSTGDAAAFSFYPTKVLGAYGD 193
Query: 187 GGMVVTDNDELAERARLIRDHGQAEKYLHVEL-GYNYRMTNIAAAIGRAQLKKLDKWNEI 245
GG V+TD++ +A+R R +R +G +Y VE G+N R+ + A I R +L +L + E
Sbjct: 194 GGAVLTDDERVADRLRRLRYYGMESRYYVVETPGHNSRLDEVQAEILRRKLSRLPSYIEA 253
Query: 246 RIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELR-NRGIG 304
R A G+ GL P +HV++ YV+R +P RD + + LR + I
Sbjct: 254 RRAVARRYEEGLAD-TGLLLPRTAQGNEHVYYVYVVR----HP-RRDAVLEALRASYDIA 307
Query: 305 TAVHYPVPVHHQPLYQKLGYPRDICP 330
+ YP PVH + LGY + P
Sbjct: 308 LNISYPWPVHTMTGFSHLGYAKGSLP 333
>gb|AAD56740.1|AF125164_13 (AF125164) putative aminotransferase [Bacteroides fragilis]
Length = 366
Score = 208 bits (524), Expect = 8e-53
Identities = 131/357 (36%), Positives = 193/357 (53%), Gaps = 13/357 (3%)
Query: 11 DEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA-LKIG- 68
DE N+V V+ SG QG E +FE+++S+Y+G K+ I NG AL +A +++G
Sbjct: 16 DEIQNSVARVVNSGWYLQGVENSSFEQKYSQYIGAKYTIGCANGLDALIWIFRAYIELGL 75
Query: 69 --QGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVH 126
GDE+I T+IAS SI G PV + D T+ +D + IT++TKAIL+VH
Sbjct: 76 MQPGDEIIVPSNTYIASILSITENGLIPVLVEPDINTYQIDDKKIEAAITNRTKAILIVH 135
Query: 127 LYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTG 185
LYGQ A + I + +L L+ED AQAHG + +K G+ G+ AA SFYP KN+ G
Sbjct: 136 LYGQCAYTEKISTICKKFDLKLVEDNAQAHGCIWGNQKTGSLGNAAAHSFYPGKNLGALG 195
Query: 186 EGGMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEI 245
+GG V TD++ELA R + ++G +KY+ G N R+ I AA+ +LK LDK N
Sbjct: 196 DGGAVTTDDEELANVVRALANYGSTKKYVFQYTGRNSRLDEIQAAVLNVKLKYLDKDNGY 255
Query: 246 RIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGT 305
R K A I + + P D HVFH + +R + R+EL L GI T
Sbjct: 256 RKKIARYYIDNITNSQIILPKVSDWNA-HVFHIFPVRCK-----KRNELQSYLAENGIQT 309
Query: 306 AVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEE 362
+HYP+P H Q Y+ + P + ++ LSLP+ P ++ + I+ + +
Sbjct: 310 IIHYPIPPHKQECYK--AWNNLSFPVSEIIHKEELSLPISPVLTDVEAKKIVSVINQ 364
>pir||C81272 probable aminotransferase (degT family) Cj1294 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968728|emb|CAB73721.1| (AL139078) putative
aminotransferase (degT family) [Campylobacter jejuni]
Length = 376
Score = 200 bits (503), Expect = 2e-50
Identities = 129/367 (35%), Positives = 200/367 (54%), Gaps = 11/367 (2%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
M+ + I+ +I+ + LK +L GK+V FE+ EY+GVKHA + + T AL +
Sbjct: 1 MLTYSHQNIDQSDIDTLTKALKDEILTGGKKVNEFEEALCEYMGVKHACVLNSATSALHL 60
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
A AL + Q V+TTP TF A+AN+ L GAK F DI N+D + ++ +++
Sbjct: 61 AYTALGV-QEKIVLTTPLTFAATANAALMAGAKVEFIDIK-NDGNIDEKKLEARLLKESE 118
Query: 121 ---AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFY 177
AI VV G +M + + +N+ LI+D + A GA ++ +KVG D++ FSF+
Sbjct: 119 NIGAISVVDFAGNSVEMDEISNLTKKYNIPLIDDASHALGALYKSEKVGKKADLSIFSFH 178
Query: 178 PTKNMTTGEGGMVVTDNDELAERARLIRDHGQAEKYL----HVELGYNYRMTNIAAAIGR 233
P K +TT EGG VV+DN+EL ++ +L+R HG +K L VELGYNYR++++A A+G
Sbjct: 179 PVKPITTFEGGAVVSDNEELIDKIKLLRSHGIVKKRLWDSDMVELGYNYRLSDVACALGI 238
Query: 234 AQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDE 293
QLKKLD E R + A + E+ + + K H Y I + ++ ++E
Sbjct: 239 NQLKKLDHNLEKREEIANFYDKEFEKNPYFSTIKIKDYKKSSRHLYPILLFPEFYCQKEE 298
Query: 294 LAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDL 353
L + L + GIG VHY P + Y+KL NA + LS+P H ++ +D
Sbjct: 299 LFESLLHAGIGVQVHYK-PTYEFSFYKKL-LGEIKLQNADNFYKAELSIPCHQEMNLKDA 356
Query: 354 DYIIRTL 360
++ TL
Sbjct: 357 KFVKDTL 363
>sp|P26398|RFBH_SALTY LIPOPOLYSACCHARIDE BIOSYNTHESIS PROTEIN RFBH >gi|96776|pir||S15306
CDP-4-keto-6-deoxyglucose-3-dehydrase (EC 4.2.1.-)
[similarity] - Salmonella typhimurium
>gi|47896|emb|CAA40122.1| (X56793)
CDP-4-keto-6-deoxy-D-glucose-3-dehydrase [Salmonella
enterica]
Length = 437
Score = 198 bits (499), Expect = 7e-50
Identities = 127/403 (31%), Positives = 204/403 (50%), Gaps = 39/403 (9%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
++P + +I +E+ +V G L G+ +AFEK+ E++GV H + T+G+ A +
Sbjct: 33 VVPPSGKVIGAKELQLMVEASLDGWLTTGRFNDAFEKKLGEFIGVPHVLTTTSGSSANLL 92
Query: 61 ALKAL---KIGQ-----GDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVL 112
AL AL K+G+ GDEVIT F + N + G PVF D+D T+N+D + +
Sbjct: 93 ALTALTSPKLGERALKPGDEVITVAAGFPTTVNPAIQNGLIPVFVDVDIPTYNIDASLIE 152
Query: 113 EKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIA 172
+T K+KAI++ H G ++ R IA+ +NL+LIEDC A G +EG+ VGTFGDI
Sbjct: 153 AAVTEKSKAIMIAHTLGNAFNLSEVRRIADKYNLWLIEDCCDALGTTYEGQMVGTFGDIG 212
Query: 173 AFSFYPTKNMTTGEGGMVVTDNDELAERARLIRD-------------------------- 206
SFYP ++T GEGG V T + EL + RD
Sbjct: 213 TVSFYPAHHITMGEGGAVFTKSGELKKIIESFRDWGRDCYCAPGCDNTCGKRFGQQLGSL 272
Query: 207 -HGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIER-IKGLT 264
G KY + LGYN ++T++ AA G AQL++++++ E R N L +G++ + L
Sbjct: 273 PQGYDHKYTYSHLGYNLKITDMQAACGLAQLERVEEFVEQRKANFSYLKQGLQSCTEFLE 332
Query: 265 PPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGY 324
P + + + I +++ ++R EL K L IGT + + + QP + + Y
Sbjct: 333 LPEATEKSDPSWFGFPITLKETSGVNRVELVKFLDEAKIGTRLLFAGNLIRQPYFANVKY 392
Query: 325 PRDI--CPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEELGG 365
R + N + + ++P ++ E LDY++ EE G
Sbjct: 393 -RVVGELTNTDRIMNQTFWIGIYPGLTTEHLDYVVSKFEEFFG 434
>emb|CAA90935.1| (Z54208) aminohydroxybenzoate synthase [Streptomyces collinus]
>gi|4884845|gb|AAD31835.1| (AF131879)
aminohydroxybenzoic acid synthase [Streptomyces
collinus]
Length = 386
Score = 198 bits (497), Expect = 1e-49
Identities = 120/312 (38%), Positives = 177/312 (56%), Gaps = 14/312 (4%)
Query: 7 PIIEDEEINAVVNVLKSGMLAQ--GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA 64
P +D E ++ L+ G + G EVE FE+EF+EY G +HA+AVTNGT AL++AL+
Sbjct: 15 PQYDDAERTGLIRALEQGQWWRMGGGEVERFEREFAEYHGGEHALAVTNGTHALELALEV 74
Query: 65 LKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILV 124
+ +G G EVI FTFI+S+ + GA V D+DP+T+ +DP + + IT +T+AI+
Sbjct: 75 MGVGPGTEVIVPAFTFISSSQAAQRLGAVVVPVDVDPETYCIDPAEAAKAITPRTRAIMP 134
Query: 125 VHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTT 184
VH+ GQ ADM A ++A D + LI+D A A GA + G+++G G +AAFSF K MT
Sbjct: 135 VHMAGQLADMDALEKVAADSGVPLIQDAAHAQGATWNGRRLGELGSVAAFSFQNGKLMTA 194
Query: 185 GEGGMVVTDNDELAERARLIRDHGQAEK---YLHVELGYNYRMTNIAAAIGRAQLKKLDK 241
GEGG V+ E+AE A L G+ Y H G N+R+ +A++ RAQL +LD
Sbjct: 195 GEGGAVLFPTAEMAEHAFLRHSCGRPRNDRGYFHRTSGSNFRLNEFSASVLRAQLARLDG 254
Query: 242 WNEIRIKNAEILSRGIERIKGLTPPFVDPRV-KHVFHQYVIRVEDDYPLSRDELAKELRN 300
R + +LS + I G+ P +D R ++ + + RV + +E R
Sbjct: 255 QIRTREERWPLLSSLLAEIPGVVPQRLDRRPDRNPHYMAMFRV--------PRITEERRA 306
Query: 301 RGIGTAVHYPVP 312
R + T V VP
Sbjct: 307 RVVDTLVERGVP 318
>pir||I39657 3-amino-5-hydroxybenzoic acid synthase (EC 4.2.1.-) - Actinosynnema
pretiosum subsp. auranticum >gi|974609|gb|AAC13997.1|
(U33059) 3-amino-5-hydroxybenzoic acid synthase
[Actinosynnema pretiosum subsp. auranticum]
Length = 388
Score = 196 bits (494), Expect = 3e-49
Identities = 128/353 (36%), Positives = 192/353 (54%), Gaps = 13/353 (3%)
Query: 5 AKPIIEDEEINAVVNVLKSGMLAQ--GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVAL 62
A P +D E A++ L G + G EV+ FE+EF+EY G HA+AVTNGT AL++AL
Sbjct: 13 AWPQHDDAERAALLRALDQGQWWRVGGSEVDEFEREFAEYHGAGHALAVTNGTHALELAL 72
Query: 63 KALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAI 122
+ L +G G EVI FTFI+S+ ++ GA V D+DP T+ LD + +TS+T AI
Sbjct: 73 QVLDVGPGTEVIVPAFTFISSSQAVQRLGAVAVPVDVDPDTYCLDVAAAEDAVTSRTSAI 132
Query: 123 LVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM 182
+ VH+ GQ ADM +++ + +++D A AHGA + GK+VG G IA FSF K M
Sbjct: 133 MPVHMAGQFADMDRLDKLSASTGVPVVQDAAHAHGAHWRGKRVGELGSIATFSFQNGKLM 192
Query: 183 TTGEGGMVVTDNDELAERARLIRDHGQAE---KYLHVELGYNYRMTNIAAAIGRAQLKKL 239
T GEGG V+ + E+A ++ G+ + Y H+ G N+RM +AA+ RAQL +L
Sbjct: 193 TAGEGGAVLFADQAQWEKAFVLHSCGRPKGDRGYFHLTSGSNFRMNEFSAAVLRAQLGRL 252
Query: 240 DKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV-KHVFHQYVIRVEDDYPLSRDELAKEL 298
D R +LS + I G+ P VDPR ++ + + R+ R+ + EL
Sbjct: 253 DSQIATRQARWPVLSALLAGIDGVVPQTVDPRSDRNPSYMAMFRMPGVTEERRNAVVDEL 312
Query: 299 RNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSRE 351
RGI + + V+ + + G P D+ P + A PV ++R+
Sbjct: 313 VRRGIPAFMAFRA-VYRTQAFWETGAP-DLTPEELAA-----RCPVSEEITRD 358
>gb|AAF71772.1|AF263912_11 (AF263912) NysDII [Streptomyces noursei]
Length = 352
Score = 196 bits (494), Expect = 3e-49
Identities = 128/359 (35%), Positives = 192/359 (52%), Gaps = 28/359 (7%)
Query: 3 PIAKPIIEDEEINAVVNVLKSGMLA-QGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVA 61
P++ P ++ E++ V + G ++ QG V FE+ F+ Y V +A ++GT AL +A
Sbjct: 6 PVSMPWLQGRELDYVTEAVGGGWISSQGPYVRRFEEAFAAYNDVPFGVACSSGTTALTLA 65
Query: 62 LKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKA 121
L+AL +G GDEVI FT IASA ++ + GA PVF D N+D + + EKIT +TK
Sbjct: 66 LRALGVGPGDEVIVPEFTMIASAWAVTYTGATPVFVDCG-DDLNIDVSRIEEKITPRTKV 124
Query: 122 ILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKN 181
I+ VH+YG+ DM A +A ++NL ++ED A+AHG V GDIA FS + K
Sbjct: 125 IMPVHIYGRQCDMDAVLNLAYEYNLRVVEDSAEAHG-------VRPRGDIACFSLFANKI 177
Query: 182 MTTGEGGMVVTDNDELAERARLIRDHG--QAEKYLHVELGYNYRMTNIAAAIGRAQLKKL 239
++ GEGG+ +T + LAE+ +R + +LH +L YN+RMTN+ AA+ AQ ++L
Sbjct: 178 ISAGEGGVCLTHDPHLAEQMAHLRAMAFTKDHSFLHKKLAYNFRMTNMQAAVALAQTEQL 237
Query: 240 DKWNEIRIKNAEILSRGIERIKGLT--PPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKE 297
D +R + + I G+T PP + V Y +R E RDEL
Sbjct: 238 DTILALRRDIEKRYDEALRDIPGITLMPP------RDVLWMYDLRAE-----RRDELCAY 286
Query: 298 LRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYI 356
L GI T V + P+ QP Y +P NA S LP H ++ ++ ++I
Sbjct: 287 LAGEGIETRVFFK-PMSRQPGYFSADWP---ALNAARLSADGFYLPTHTGLTAQEQEFI 341
>gb|AAD27811.1|AF115779_1 (AF115779) 3-amino-5-hydroxybenzoic acid synthase [Streptomyces
lavendulae] >gi|4895116|gb|AAD32723.1| (AF127374) MitA
[Streptomyces lavendulae]
Length = 388
Score = 196 bits (492), Expect = 5e-49
Identities = 124/329 (37%), Positives = 180/329 (54%), Gaps = 12/329 (3%)
Query: 29 GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFTFIASANSIL 88
G+EV+ FE+EF+++ G HAIA TNGT AL++AL + IG GDEVI FTFI+S+ ++
Sbjct: 40 GQEVDLFEREFADHHGAPHAIATTNGTHALELALGVMGIGPGDEVIVPAFTFISSSLAVQ 99
Query: 89 FQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYL 148
GA PV AD+ P T+ LD + +T +TKAI+ VH+ GQ ADM A +++ + +
Sbjct: 100 RMGAVPVPADVRPDTYCLDADAAAALVTPRTKAIMPVHMAGQFADMDALEKLSVATGVPV 159
Query: 149 IEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHG 208
++D A AHGA+++G++VG G IAAFSF K MT GEGG ++ +DE A L G
Sbjct: 160 LQDAAHAHGAQWQGRRVGELGSIAAFSFQNGKLMTAGEGGALLLPDDESFHEAFLQHCCG 219
Query: 209 QA---EKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTP 265
+ Y H+ G NYRM +A++ RAQLK+L IR + L + I G+ P
Sbjct: 220 RPPGDRVYRHLTQGSNYRMNEFSASVLRAQLKRLKDQLRIREERWAQLRTALAAIDGVVP 279
Query: 266 PFVDPRVK-HVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGY 324
D R H + ++R+ R L L RG+ V +P P+Y+ G+
Sbjct: 280 QGRDERGDLHSHYMAMVRLPGISARRRLALVDALVERGVPAFVGFP------PVYRTEGF 333
Query: 325 PRDICPNAIEASRKVLSLPVHPAVSREDL 353
R P +A S PV + + L
Sbjct: 334 ARG--PAPADAEELAKSCPVAEEIGSDCL 360
>gb|AAD45549.1|U70376_14 (U70376) SpcE [Streptomyces flavopersicus]
Length = 427
Score = 194 bits (487), Expect = 2e-48
Identities = 128/356 (35%), Positives = 192/356 (52%), Gaps = 28/356 (7%)
Query: 35 FEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFTFIASANSILFQGAKP 94
F F+ Y V +A+ TNG+ AL +A++AL G G EVI T++A A+S GA P
Sbjct: 61 FADAFAAYHQVPYAVPTTNGSAALTIAMEALGAGPGTEVIVPGLTWVACASSAAALGATP 120
Query: 95 VFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQ 154
V D+DP+T ++ + +T +T AILVVH Y AD+ AF E++ + LIEDC+Q
Sbjct: 121 VLVDVDPETLSISADAAKAAVTDRTVAILVVHAYCSSADIDAFLELSRSTGIPLIEDCSQ 180
Query: 155 AHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQ---AE 211
AHGAE+ G+KVGT+G I FS TK +T+GEGG+ +T +D+L +R + R +G+ A
Sbjct: 181 AHGAEWNGRKVGTYGTIGVFSLQQTKVLTSGEGGIAITSDDDLYDRLQQYRANGRRWGAR 240
Query: 212 KYLH-VEL-------GYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGL 263
LH +EL G+N+ M+ AA+ +QL LD + +R NAE+L+ +ERI G+
Sbjct: 241 PVLHQLELEDVGTYEGHNHAMSEFHAAVALSQLDHLDAQSALRSTNAEVLNGLLERIPGV 300
Query: 264 -TPPFVDPRVKHVFHQYVIRVEDD----YPLSR--DELAKELRNRGIGTAVHYPVPVHHQ 316
T P + ++ YVIR++ D P+ R D +A EL G+ P++
Sbjct: 301 STVPAPAGLTRRTYYDYVIRLDPDLLGAVPIDRVVDAMAAEL---GMFFET-LDAPLNAN 356
Query: 317 PLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDY------IIRTLEELGGE 366
LY L PR A+ P+ A + + ++ T EE GG+
Sbjct: 357 KLYGPLKSPRTPPSEAVREKLDPARFPLPAATAAFHTCFAFLHQALLATPEERGGD 412
>gb|AAF72550.1|AF269227_2 (AF269227) NDP-hexose 3,4-dehydratase UrdQ [Streptomyces fradiae]
Length = 434
Score = 193 bits (486), Expect = 2e-48
Identities = 126/393 (32%), Positives = 193/393 (49%), Gaps = 40/393 (10%)
Query: 8 IIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKAL-- 65
++++ + A+V +A G FE F+ L + A +G+ A +A+ AL
Sbjct: 38 VLDESDRVALVEAALDMRIAAGTSSRKFESAFARRLKRRKAHLTNSGSSANLLAVSALTS 97
Query: 66 ------KIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT 119
++ GDEVIT F + N IL G PVF D+D T+N V + I KT
Sbjct: 98 HVLEDRRLRPGDEVITVAAGFPTTVNPILQNGLVPVFVDVDLPTYNATAERVAQAIGPKT 157
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
+AI++ H G P ++ ++AE+H+L+LIED A G+ ++G+ GTFGD+ SFYP
Sbjct: 158 RAIIIAHALGNPFEVAEMAQLAEEHDLFLIEDNCDAVGSTYDGQLTGTFGDLTTVSFYPA 217
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQA---------------------------EK 212
++T GEGG V+T N LA +RD G+ K
Sbjct: 218 HHLTMGEGGCVLTSNLSLARIVESLRDWGRDCWCEPGENDRCLKRFKYQMGTLPAGYDHK 277
Query: 213 YLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV 272
Y+ +GYN + T+I AA+G QL KLD + E R +N L G++ + GL P PR
Sbjct: 278 YIFSHVGYNLKATDIQAALGLTQLAKLDDFIEARQRNWRRLREGLDGVPGLLLPEPTPRS 337
Query: 273 KHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDI---C 329
+ + +VI V D P SR EL L +R IGT + + P Y + P I
Sbjct: 338 QPSWFGFVITVAPDAPFSRAELVDFLEDRKIGTRRLFAGNLTRHPAY--IDQPHRIVGEL 395
Query: 330 PNAIEASRKVLSLPVHPAVSREDLDYIIRTLEE 362
N+ + + + V+PA++ E LDY+ +++E
Sbjct: 396 TNSDLVTEQTFWIGVYPALTDEMLDYVTASIKE 428
>pir||E47070 CDP-4-keto-6-deoxy-D-glucose-3-dehydrase - Yersinia
pseudotuberculosis >gi|155498|gb|AAB49401.1| (L01777)
CDP-4-keto-6-deoxy-D-glucose 3-dehydrase [Yersinia
pseudotuberculosis] >gi|6580716|emb|CAB63292.1|
(AJ251712) CDP-4-keto-6-deoxy-D-glucose-3-dehydrase
[Yersinia pseudotuberculosis]
Length = 437
Score = 193 bits (485), Expect = 3e-48
Identities = 124/403 (30%), Positives = 201/403 (49%), Gaps = 39/403 (9%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
++P + +I +E+ +V G L G+ +AFEK+ EYLGV + + T+G+ A +
Sbjct: 33 VVPPSGKVIGTKELQLMVEASLDGWLTTGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLL 92
Query: 61 ALKAL---KIG-----QGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVL 112
AL AL K+G GDEVIT F + N + G PVF D+D T+N++ + +
Sbjct: 93 ALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIE 152
Query: 113 EKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIA 172
++ KTKAI++ H G D+ R +A+ +NL+LIEDC A G+ ++GK GTFGDI
Sbjct: 153 AAVSDKTKAIMIAHTLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFGDIG 212
Query: 173 AFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQ----------------------- 209
SFYP ++T GEGG V T + EL RD G+
Sbjct: 213 TVSFYPAHHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSL 272
Query: 210 ----AEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKG-LT 264
KY + LGYN ++T++ AA G AQL++++++ E R N + L ++ L
Sbjct: 273 PFGYDHKYTYSHLGYNLKITDMQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADFLE 332
Query: 265 PPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGY 324
P + + I +++D +SR +L K L +GT + + + QP + + Y
Sbjct: 333 LPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKY 392
Query: 325 PRDI--CPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEELGG 365
R + N + + ++P ++ + LDY++ EE G
Sbjct: 393 -RVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434
>emb|CAB63273.1| (AJ251713) CDP-4-keto-6-deoxy-D-glucose-3-dehydratase [Yersinia
pestis]
Length = 437
Score = 192 bits (483), Expect = 5e-48
Identities = 123/403 (30%), Positives = 201/403 (49%), Gaps = 39/403 (9%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
++P + +I +E+ +V G L G+ +AFEK+ EYLGV + + T+G+ A +
Sbjct: 33 VVPPSGKVIGTKELQLMVEASLDGWLTTGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLL 92
Query: 61 ALKAL---KIG-----QGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVL 112
AL AL K+G GDEVIT F + N + G PVF D+D T+N++ + +
Sbjct: 93 ALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIE 152
Query: 113 EKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIA 172
++ KTKAI++ H G D+ R +A+ +NL+LIEDC A G+ ++GK GTFGDI
Sbjct: 153 AAVSDKTKAIMIAHTLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFGDIG 212
Query: 173 AFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQ----------------------- 209
SFYP ++T GEGG V T + EL RD G+
Sbjct: 213 TVSFYPAHHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSL 272
Query: 210 ----AEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKG-LT 264
KY + LGYN ++T++ AA G AQL++++++ E R N + L ++ +
Sbjct: 273 PFGYDHKYTYSHLGYNLKITDMQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADFIE 332
Query: 265 PPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGY 324
P + + I +++D +SR +L K L +GT + + + QP + + Y
Sbjct: 333 LPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKY 392
Query: 325 PRDI--CPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEELGG 365
R + N + + ++P ++ + LDY++ EE G
Sbjct: 393 -RVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434
>gb|AAA88701.1| (L33181) CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehyd rase
[Yersinia pseudotuberculosis] >gi|633876|gb|AAB31757.1|
(S72887) CDP-6-deoxy-L-threo-D-glycero-4-
hexulose-3-dehydrase; E1 [Yersinia pseudotuberculosis]
Length = 437
Score = 191 bits (480), Expect = 1e-47
Identities = 123/403 (30%), Positives = 200/403 (49%), Gaps = 39/403 (9%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
++P + +I +E+ +V G L G+ +AFEK+ EYLGV + + T+G+ A +
Sbjct: 33 VVPPSGKVIGTKELQLMVEASLDGWLTTGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLL 92
Query: 61 ALKAL---KIG-----QGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVL 112
AL AL K+G GDEVIT F + N + G PVF D+D T+N++ + +
Sbjct: 93 ALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIE 152
Query: 113 EKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIA 172
++ KTKAI++ H G D+ R +A+ +NL+LIEDC A G+ ++GK GTFGDI
Sbjct: 153 AAVSDKTKAIMIAHTLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFGDIG 212
Query: 173 AFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQ----------------------- 209
SFYP ++T GEGG V T + EL RD G+
Sbjct: 213 TVSFYPAHHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSL 272
Query: 210 ----AEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKG-LT 264
KY + LGYN ++T++ AA G AQL+ ++++ E R N + L ++ +
Sbjct: 273 PFGYDHKYTYSHLGYNLKITDMQAACGLAQLEPIEEFVEKRKANFKYLKDALQSCADFIE 332
Query: 265 PPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGY 324
P + + I +++D +SR +L K L +GT + + + QP + + Y
Sbjct: 333 LPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKY 392
Query: 325 PRDI--CPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEELGG 365
R + N + + ++P ++ + LDY++ EE G
Sbjct: 393 -RVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434
>gb|AAC45856.1| (U50396) WbpE [Pseudomonas aeruginosa]
Length = 276
Score = 190 bits (477), Expect = 3e-47
Identities = 102/261 (39%), Positives = 156/261 (59%), Gaps = 2/261 (0%)
Query: 9 IEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIG 68
I+D+ + VL+ G G EV E ++++G K+ I+ NGT AL + AL +G
Sbjct: 14 IKDKIDAGIQRVLRHGQYILGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVG 73
Query: 69 QGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLY 128
GDEVIT FT++A+A ++ GAKPV+ DIDP+T+NLDP + IT +TKAI+ V LY
Sbjct: 74 PGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAIIPVSLY 133
Query: 129 GQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM-TTGEG 187
GQ AD A IA + + +IED AQ+ GA ++GK+ +A SF+P+K + G+G
Sbjct: 134 GQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSKPLGCYGDG 193
Query: 188 GMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRI 247
G + T++DELA R I HGQ +Y H+ +G N R+ + AAI +L+ ++ +R
Sbjct: 194 GAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQ 253
Query: 248 KNAEILSRGIERIKGLTPPFV 268
K A ++++ G+ PF+
Sbjct: 254 KVAAEYDLSLKQV-GIGTPFI 273
>gb|AAB81623.1| (AF025396) DdhC [Vibrio anguillarum]
Length = 437
Score = 190 bits (477), Expect = 3e-47
Identities = 123/403 (30%), Positives = 197/403 (48%), Gaps = 39/403 (9%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
++P + ++ +E+ +V+ G L G+ +AFEK EYLGV + T+G+ A +
Sbjct: 33 VVPPSGKVLGAKELQLMVDASLDGWLTTGRFNDAFEKRLGEYLGVPFVLTTTSGSSANLL 92
Query: 61 ALKAL---KIGQ-----GDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVL 112
AL L K+G GDEVIT F + N + G PVF D+D T+ + P +
Sbjct: 93 ALTTLTSPKLGDRQLKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYQIKPEMIE 152
Query: 113 EKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIA 172
++ KTKAI+V H G D+ R +A+ +NL+LIEDC A G+ + GK VGT GDIA
Sbjct: 153 AAVSEKTKAIMVAHTLGNTFDLTEARRVADKYNLWLIEDCCDALGSTYNGKMVGTIGDIA 212
Query: 173 AFSFYPTKNMTTGEGGMVVTDNDELAERARLIRD-------------------------- 206
SFYP ++T GEGG V T + EL + RD
Sbjct: 213 TVSFYPAHHITMGEGGAVFTKDKELRKLIESFRDWGRDCYCAPGCDNTCGKRFDQQLGSL 272
Query: 207 -HGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKG-LT 264
G KY + LGYN ++T++ AA G AQ+ +++++ + R +N L G+ + +
Sbjct: 273 PQGYDHKYTYSHLGYNLKITDMQAACGLAQMDRVEEFVQARKENFAYLKNGLASCEEFII 332
Query: 265 PPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGY 324
P + + + I ++DD +SR +L K + IGT + + + QP ++ + Y
Sbjct: 333 LPEATENSEPSWFGFPITIKDDSGISRVDLLKFMDQHKIGTRLLFAGNLTRQPYFEHVKY 392
Query: 325 PRDI--CPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEELGG 365
R + N + V+P ++ LD+++ EE G
Sbjct: 393 -RVVGELTNTDLIMNNTFWIGVYPGLTLAHLDFVLEKFEEFFG 434
>pdb|1B9H|A Chain A, Crystal Structure Of 3-Amino-5-Hydroxybenzoic Acid (Ahba)
Synthase
Length = 388
Score = 189 bits (475), Expect = 5e-47
Identities = 121/342 (35%), Positives = 179/342 (51%), Gaps = 16/342 (4%)
Query: 5 AKPIIEDEEINAVVNVLKSGMLAQ--GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVAL 62
A P +D E N +V L+ G + G EV +FE+EF+ + G HA+AVTNGT AL++AL
Sbjct: 11 AWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELAL 70
Query: 63 KALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAI 122
+ + +G G EVI FTFI+S+ + GA V D+D T+NLDP V +T +TK I
Sbjct: 71 QVMGVGPGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVI 130
Query: 123 LVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM 182
+ VH+ G ADM A +I+ D + L++D A AHGA ++GK+VG IA FSF K M
Sbjct: 131 MPVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLM 190
Query: 183 TTGEGGMVVTDNDELAERARLIRDHG-----QAEKYLHVELGYNYRMTNIAAAIGRAQLK 237
T GEGG VV + E + H +Y H G N R+ +A++ RAQL
Sbjct: 191 TAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLA 250
Query: 238 KLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV-KHVFHQYVIRVEDDYPLSRDELAK 296
+LD+ +R + +LSR + I G+ P D R ++ + + R+ R+ L
Sbjct: 251 RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVD 310
Query: 297 ELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDI-------CPN 331
L G+ + ++ + +LG P + CPN
Sbjct: 311 RLVEAGLPAFAAFRA-IYRTDAFWELGAPDESVDAIARRCPN 351
>pdb|1B9I|A Chain A, Crystal Structure Of 3-Amino-5-Hydroxybenzoic Acid (Ahba)
Synthase
Length = 388
Score = 189 bits (475), Expect = 5e-47
Identities = 121/342 (35%), Positives = 179/342 (51%), Gaps = 16/342 (4%)
Query: 5 AKPIIEDEEINAVVNVLKSGMLAQ--GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVAL 62
A P +D E N +V L+ G + G EV +FE+EF+ + G HA+AVTNGT AL++AL
Sbjct: 11 AWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELAL 70
Query: 63 KALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAI 122
+ + +G G EVI FTFI+S+ + GA V D+D T+NLDP V +T +TK I
Sbjct: 71 QVMGVGPGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVI 130
Query: 123 LVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM 182
+ VH+ G ADM A +I+ D + L++D A AHGA ++GK+VG IA FSF K M
Sbjct: 131 MPVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLM 190
Query: 183 TTGEGGMVVTDNDELAERARLIRDHG-----QAEKYLHVELGYNYRMTNIAAAIGRAQLK 237
T GEGG VV + E + H +Y H G N R+ +A++ RAQL
Sbjct: 191 TAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLA 250
Query: 238 KLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV-KHVFHQYVIRVEDDYPLSRDELAK 296
+LD+ +R + +LSR + I G+ P D R ++ + + R+ R+ L
Sbjct: 251 RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVD 310
Query: 297 ELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDI-------CPN 331
L G+ + ++ + +LG P + CPN
Sbjct: 311 RLVEAGLPAFAAFRA-IYRTDAFWELGAPDESVDAIARRCPN 351
>gb|AAC01720.1| (AF040570) 3-amino-5-hydroxybenzoic acid synthase [Amycolatopsis
mediterranei]
Length = 388
Score = 188 bits (473), Expect = 8e-47
Identities = 121/342 (35%), Positives = 179/342 (51%), Gaps = 16/342 (4%)
Query: 5 AKPIIEDEEINAVVNVLKSGMLAQ--GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVAL 62
A P +D E N +V L+ G + G EV +FE+EF+ + G HA+AVTNGT AL++AL
Sbjct: 11 AWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELAL 70
Query: 63 KALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAI 122
+ + +G G EVI FTFI+S+ + GA V D+D T+NLDP V +T +TK I
Sbjct: 71 QVMGVGPGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVI 130
Query: 123 LVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM 182
+ VH+ G ADM A +I+ D + L++D A AHGA ++GK+VG IA FSF K M
Sbjct: 131 MPVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLM 190
Query: 183 TTGEGGMVVTDNDELAERARLIRDHG-----QAEKYLHVELGYNYRMTNIAAAIGRAQLK 237
T GEGG VV + E + H +Y H G N R+ +A++ RAQL
Sbjct: 191 TAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLA 250
Query: 238 KLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV-KHVFHQYVIRVEDDYPLSRDELAK 296
+LD+ +R + +LSR + I G+ P D R ++ + + R+ R+ L
Sbjct: 251 RLDEQIAVRDEPWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVD 310
Query: 297 ELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDI-------CPN 331
L G+ + ++ + +LG P + CPN
Sbjct: 311 RLVEAGLPAFAAFRA-IYRTDAFWELGAPDESVDAIARRCPN 351
>emb|CAA75797.1| (Y15812) L-Lysine 2-aminotransferase [Streptomyces tendae]
>gi|5420040|emb|CAB46533.1| (Y18574) L-lysine
2-aminotransferase [Streptomyces tendae]
Length = 426
Score = 188 bits (472), Expect = 1e-46
Identities = 122/391 (31%), Positives = 202/391 (51%), Gaps = 33/391 (8%)
Query: 3 PIAKPIIEDEEINAVVNVLKSG-MLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVA 61
P I+ E+ A+ V++SG L+QG+ +AFE+ E++G ++A+ VT+GT+A+ +A
Sbjct: 15 PAVGSILGGAELAALGEVVRSGESLSQGRWRDAFEQAMREHVGSRYAMTVTSGTVAVALA 74
Query: 62 LKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKA 121
+ L + GDEVI TP TF A+ + +L F D++P T N+D + IT +T+A
Sbjct: 75 VHLLDLAPGDEVIVTPQTFKATVDPLLAHDVTVRFCDVEPDTLNVDVDSFESLITPRTRA 134
Query: 122 ILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKN 181
+++VH G+PA M +A H + +IEDCA A GA + G++ G GDI FSF+ +KN
Sbjct: 135 LILVHYGGRPARMDEIMRVARRHGVRVIEDCAHALGALYRGRRPGALGDIGCFSFHSSKN 194
Query: 182 MTT-GEGGMVVTDNDELAERARLIRDHG----------QAEKYLHVE------------- 217
+TT GEGGM+ D+ E AER IR + A Y H E
Sbjct: 195 ITTLGEGGMLTFDDPEWAERLDRIRSNAADGVLIPSPLSAGPYQHSEPWMMWAGDSYEKE 254
Query: 218 ------LGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPR 271
G N ++ AA+G QL++L + R A L+R + + + V
Sbjct: 255 CLRIRHPGSNATLSEAGAAVGLVQLERLGELAGRRRWIAGRLARTLAELPQVRLADVPED 314
Query: 272 VKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPN 331
+ H +H + V +SRDE+ L + G+ V Y P+H +P ++ G+ CP
Sbjct: 315 IHHPYHLFTFFVRPGQGVSRDEVIHALEDAGVQVQVRY-FPLHLRPEWRGRGHRLGECPV 373
Query: 332 AIEA-SRKVLSLPVHPAVSREDLDYIIRTLE 361
+ ++LP +P+++ +++++ L+
Sbjct: 374 TERLWFHEQVNLPCYPSMTDGQVEHLVLALK 404
>pir||I39599 3-amino-5-hydroxybenzoic acid synthase (EC 4.2.1.-) - Amycolatopsis
mediterranei >gi|974607|gb|AAA75105.1| (U33061)
3-amino-5-hydroxy benzoic acid synthase [Amycolatopsis
mediterranei]
Length = 388
Score = 187 bits (469), Expect = 2e-46
Identities = 120/342 (35%), Positives = 178/342 (51%), Gaps = 16/342 (4%)
Query: 5 AKPIIEDEEINAVVNVLKSGMLAQ--GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVAL 62
A P +D E N +V L+ G + G EV +FE+EF+ + G H +AVTNGT AL++AL
Sbjct: 11 AWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAAHGLAVTNGTHALELAL 70
Query: 63 KALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAI 122
+ + +G G EVI FTFI+S+ + GA V D+D T+NLDP V +T +TK I
Sbjct: 71 QVMGVGPGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVI 130
Query: 123 LVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM 182
+ VH+ G ADM A +I+ D + L++D A AHGA ++GK+VG IA FSF K M
Sbjct: 131 MPVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLM 190
Query: 183 TTGEGGMVVTDNDELAERARLIRDHG-----QAEKYLHVELGYNYRMTNIAAAIGRAQLK 237
T GEGG VV + E + H +Y H G N R+ +A++ RAQL
Sbjct: 191 TAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLA 250
Query: 238 KLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV-KHVFHQYVIRVEDDYPLSRDELAK 296
+LD+ +R + +LSR + I G+ P D R ++ + + R+ R+ L
Sbjct: 251 RLDEQIAVRDEPWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVD 310
Query: 297 ELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDI-------CPN 331
L G+ + ++ + +LG P + CPN
Sbjct: 311 RLVEAGLPAFAAFRA-IYRTDAFWELGAPDESVDAIARRCPN 351
>pir||E71369 probable spore coat polysaccharide biosynthesis protein (spsC) -
syphilis spirochete >gi|3322337|gb|AAC65073.1|
(AE001192) spore coat polysaccharide biosynthesis
protein (spsC) [Treponema pallidum]
Length = 412
Score = 186 bits (467), Expect = 4e-46
Identities = 118/377 (31%), Positives = 196/377 (51%), Gaps = 22/377 (5%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVA 61
+P P + E AV +VL+SG + G + AFEKEF+ Y+G +A AV + T L +
Sbjct: 26 VPFFVPSFSEAEERAVCDVLRSGWITTGTQALAFEKEFAAYVGAPYACAVNSATSGLLLT 85
Query: 62 LKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPN--DVLEKITSKT 119
A+ IG +++T+P+TF+++A+S L GA+ V+ADI+ ++N+ + K ++
Sbjct: 86 FDAMGIGPDSKILTSPYTFVSTASSALHLGAQVVYADIERDSYNISAECVEACLKKDARI 145
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
+AI+ +H+ G +M+ +A + + ++ED A A ++ GT FSFY T
Sbjct: 146 RAIVPIHIAGNVCNMRDLNALARKYQVAVVEDAAHAFPSKTACGYAGTLSHAGVFSFYAT 205
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHG-------------QAEKYLHVELGYNYRMTN 226
K +TTGEGGMV T++ +LA R +R HG +Y LG+ + +
Sbjct: 206 KPLTTGEGGMVCTNDAKLAARIACLRSHGIDRAIWDRYTNGTAPWRYDVTSLGWKCNLPD 265
Query: 227 IAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGL-TPPFVDPRVKHVFHQYVIR-VE 284
I AAIGR QL+K R + A +R R + TPP D + +H Y++R V
Sbjct: 266 ILAAIGRVQLQKAAHLFAQRARIAAAFTRAFSRYEFFCTPPDGD---GNAWHLYLLRLVP 322
Query: 285 DDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQK-LGYPRDICPNAIEASRKVLSLP 343
+SRDE + L+ RG+G ++H+ +P ++K L + P + L+LP
Sbjct: 323 GTLSVSRDEFVRLLQERGLGVSMHF-IPHFEMTFFKKSLCVRAEDFPECAHKYQHTLTLP 381
Query: 344 VHPAVSREDLDYIIRTL 360
+ P + + Y+I T+
Sbjct: 382 LWPGMDDSCVAYVIETV 398
>gb|AAD31828.1| (AF131877) aminohydroxybenzoic acid synthase [Streptomyces
collinus]
Length = 388
Score = 185 bits (466), Expect = 5e-46
Identities = 109/303 (35%), Positives = 168/303 (54%), Gaps = 6/303 (1%)
Query: 7 PIIEDEEINAVVNVLKSGMLAQ--GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA 64
P +DEE ++ L+ G + G+EV +FE+EF+++ G HA AVTNGT A ++AL+
Sbjct: 13 PQYDDEERTGLIRALEQGQWWRMGGEEVSSFEQEFADFHGAPHAFAVTNGTHAFELALQV 72
Query: 65 LKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILV 124
+ G G EVI FTFI+S+ + GA V D+DP T+N+D +T +T+ I+
Sbjct: 73 MGAGPGTEVIVPAFTFISSSQAAQRIGAVAVPVDVDPDTYNIDVAAAAAAVTPRTRVIMP 132
Query: 125 VHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTT 184
VH+ G ADM A +++ D + +++D A A GA ++GK+VG G +AAFSF K MT
Sbjct: 133 VHMAGLMADMDALGKLSADTGVAILQDAAHAQGARWQGKRVGELGTVAAFSFQNGKLMTA 192
Query: 185 GEGGMVVTDNDELAERARLIRDHGQA---EKYLHVELGYNYRMTNIAAAIGRAQLKKLDK 241
GEGG V+ ++L E A L G+ Y H G N R+ +AA+ RAQL++L
Sbjct: 193 GEGGAVLFPENDLYEAAFLRHSCGRPRTDRHYKHQVAGTNMRLNEFSAAVLRAQLRRLPA 252
Query: 242 WNEIRIKNAEILSRGIERIKGLTPPFVDPRV-KHVFHQYVIRVEDDYPLSRDELAKELRN 300
E+R + +LSR + + G+ P D R ++ + + R+ R+ L L
Sbjct: 253 QTELRDRRWALLSRLLGAVDGVVPQGGDVRADQNTHYMAMFRIPGITEADRNTLVDRLVE 312
Query: 301 RGI 303
G+
Sbjct: 313 AGL 315
>pir||C71861 probable sugar nucleotide biosynthesis - Helicobacter pylori
(strain J99) >gi|4155598|gb|AAD06590.1| (AE001529)
putative SUGAR NUCLEOTIDE BIOSYNTHESIS [Helicobacter
pylori J99]
Length = 378
Score = 184 bits (462), Expect = 2e-45
Identities = 122/360 (33%), Positives = 192/360 (52%), Gaps = 13/360 (3%)
Query: 5 AKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA 64
++P +++E+ AV+ VL S L QGK FE+ E+LGVKHA+A + T AL +
Sbjct: 7 SEPCLDEEDKKAVLEVLNSKQLTQGKYSLLFEEALCEFLGVKHALAFNSATSALLTLYRN 66
Query: 65 LKIGQGD--EVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAI 122
D E+ITTP +F+A+AN +L G PVFA++ N+D + + IT KTKAI
Sbjct: 67 FSDFNADRNEIITTPISFVATANMLLESGYTPVFAEVK-NDGNIDELALEKLITKKTKAI 125
Query: 123 LVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM 182
+ V G+ ++++ + + + ++L + D + A G+E++ KKVG F + FSF+ K +
Sbjct: 126 VSVDYAGKSVEIESIQRLCKKYSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPI 185
Query: 183 TTGEGGMVVTDNDELAERARLIRDHGQAEKYLH----VELGYNYRMTNIAAAIGRAQLKK 238
TT EGG VVT+N EL E+ +L R HG +K +GYN+R+ I +A+G +QLKK
Sbjct: 186 TTAEGGAVVTNNSELYEKMKLFRSHGMLKKDFFEGEVKSVGYNFRLNEIQSALGLSQLKK 245
Query: 239 LDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVF--HQYVIRVEDDYPLSRDELAK 296
+ R + A I + TP + P +KH H Y I + + + + +
Sbjct: 246 APLLRQKREEVALIYDEIFKDNPYFTP--LHPLLKHQSSNHLYPILMHQKFFTCKKLILE 303
Query: 297 ELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYI 356
L GI VHY P++ LYQ+L + +A + +SLP H + E + I
Sbjct: 304 SLHKLGILVQVHYK-PIYQYQLYQQL-FNTAPLKSAEDFYSAEISLPCHANLDLESVQNI 361
>gb|AAF73452.1|AF264025_3 (AF264025) putative 3-dehydratase; AknP [Streptomyces galilaeus]
Length = 434
Score = 183 bits (461), Expect = 2e-45
Identities = 120/393 (30%), Positives = 191/393 (48%), Gaps = 40/393 (10%)
Query: 8 IIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKAL-- 65
++++E+ A+V +A G FE +F+ ++GV+ A V +G+ A +AL AL
Sbjct: 38 VLDEEDRVALVEAALDLRIAAGAHSRRFESKFARHIGVRKAHLVNSGSSANLLALSALTS 97
Query: 66 ------KIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT 119
++ GDEVIT F + N IL G PVF D++ T+N V I+ +T
Sbjct: 98 PRLGEQRLRPGDEVITVAGGFPTTVNPILQNGLTPVFVDLELGTYNTTVEHVRAAISDRT 157
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
+AI++ H G P + +++A +H L+LIED A G+ ++G+ GTFGD+A SFYP
Sbjct: 158 RAIMIAHTLGNPYQVAEIQQLATEHELFLIEDNCDAVGSTYQGRMTGTFGDLATVSFYPA 217
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQ---------------------------AEK 212
++TTGEGG V+T N ELA RD G+ K
Sbjct: 218 HHITTGEGGCVLTRNLELARIVESFRDWGRDCWCEPGEDNTCLKRFDYQLGNLPKGYDHK 277
Query: 213 YLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV 272
Y+ +GYN + T++ A+ +QL KL ++ R +N + L G+ + GL P P
Sbjct: 278 YIFSHIGYNLKATDLQGALALSQLNKLPEFGAARRRNWQRLRDGLADVPGLLLPVATPGS 337
Query: 273 KHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDIC--- 329
+ +VI V D +R +L L R IGT + + P Y LG P +
Sbjct: 338 DPSWFGFVITVLPDATYTRRDLVAFLEERRIGTRRLFGGNLTRHPAY--LGTPHRVAGDL 395
Query: 330 PNAIEASRKVLSLPVHPAVSREDLDYIIRTLEE 362
N+ + + + V+P ++ E DY+ ++ E
Sbjct: 396 RNSDIITEQSFWIGVYPGITEEMTDYMRESIVE 428
>pir||C69834 sensory transduction pleiotropic regulator homolog yhjL - Bacillus
subtilis >gi|2226184|emb|CAA74474.1| (Y14081)
hypothetical protein [Bacillus subtilis]
>gi|2633391|emb|CAB12895.1| (Z99109) similar to sensory
transduction pleiotropic regulatory protein [Bacillus
subtilis]
Length = 441
Score = 183 bits (459), Expect = 3e-45
Identities = 126/376 (33%), Positives = 197/376 (51%), Gaps = 31/376 (8%)
Query: 2 IPIAKPIIEDEE---INAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIAL 58
+P+ + I DE +N + VL +G G +E FEK S YL ++ IA ++GT A+
Sbjct: 70 LPVDRLITNDEVEDILNTLTEVLPTGKFTSGPYLEQFEKVLSTYLHKRYVIATSSGTDAI 129
Query: 59 DVALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSK 118
+ L AL + GDEVI +F A+ N++L G P++ DI+P+TF +DP+ + E IT
Sbjct: 130 MIGLLALGLNPGDEVIMPANSFSATENAVLASGGVPIYVDINPQTFCIDPDKIEEAITPY 189
Query: 119 TKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYP 178
TK IL VHLYG+ +DM+ R+IA + L +IED Q G +G + DI SF P
Sbjct: 190 TKFILPVHLYGKHSDMQHIRQIANRYKLKVIEDACQGIGL----TDLGKYADITTLSFNP 245
Query: 179 TKNM-TTGEGGMVVTDNDELAERARLIRDHG---QAEKYLHVELGYNYRMTNIAAAIGRA 234
KN G+ G + TDN+ELA++ HG + + G+N +M N+ AAIG
Sbjct: 246 YKNFGVCGKAGAIATDNEELAKKCIQFSYHGFEVNVKNKKVINFGFNSKMDNLQAAIGLE 305
Query: 235 QLKKLDKWNEIRI--------KNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDD 286
++K L N R+ + AE+ ++G + L+ HV+H + I+V +
Sbjct: 306 RMKYLSLNNFKRLFLADRYITQLAELQNKGYIELPELSE-------DHVWHLFPIKVRTE 358
Query: 287 YPLSRDELAKELRNRGIGTAVHYPVPVHHQ--PLYQKLGYPRDICPNAIEASRKVLSLPV 344
D + K + G+ T V+YP+ H Q PL Q Y + +A +VL LP+
Sbjct: 359 D--RADIMTKLNEDFGVQTDVYYPILSHMQKTPLVQD-KYAGLQLVHTEKAHSQVLHLPL 415
Query: 345 HPAVSREDLDYIIRTL 360
+P+ + E+ D ++ L
Sbjct: 416 YPSFTLEEQDRVMEGL 431
>gb|AAB84075.1| (U77459) EryCIV [Saccharopolyspora erythraea]
>gi|2665339|emb|CAA72084.1| (Y11199) putative
aminotransferase-dehydrase [Saccharopolyspora erythraea]
Length = 401
Score = 182 bits (458), Expect = 4e-45
Identities = 114/329 (34%), Positives = 178/329 (53%), Gaps = 11/329 (3%)
Query: 29 GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFTFIASANSIL 88
G V FE ++ GV+H +A N T+AL + L+A + EV+ TF A+A++
Sbjct: 51 GPLVREFEGRVADLAGVRHCVATCNATVALQLVLRASDVS--GEVVMPSMTFAATAHAAS 108
Query: 89 FQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYL 148
+ G +PVF D+DP+T LDP V +T +T AI+ VHL+G+PA ++A +IA +H + L
Sbjct: 109 WLGLEPVFCDVDPETGLLDPEHVASLVTPRTGAIIGVHLWGRPAPVEALEKIAAEHQVKL 168
Query: 149 IEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHG 208
D A A G G+ VG FG+ FSF+ TK +T+ EGG +VTD+ LA+R R + + G
Sbjct: 169 FFDAAHALGCTAGGRPVGAFGNAEVFSFHATKAVTSFEGGAIVTDDGLLADRIRAMHNFG 228
Query: 209 QAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNA---EILSRGIERIKGLTP 265
A L ++G N +M+ AAA+G L LD + E R+ N + S + ++G++
Sbjct: 229 IAPDKLVTDVGTNGKMSECAAAMG---LTSLDAFAETRVHNRLNHALYSDELRDVRGISV 285
Query: 266 PFVDPRVKHVFHQYVIRVEDDYP-LSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGY 324
DP ++ + +I V+ + RD+L LR + ++ H Y+
Sbjct: 286 HAFDPGEQNNYQYVIISVDSAATGIDRDQLQAILRAEKVVAQPYFSPGCHQMQPYRT--E 343
Query: 325 PRDICPNAIEASRKVLSLPVHPAVSREDL 353
P N + S +VL+LP PAVS ED+
Sbjct: 344 PPLRLENTEQLSDRVLALPTGPAVSSEDI 372
>pir||S74758 probable hydro-lyase (EC 4.2.1.-) slr1615 - Synechocystis sp.
(strain PCC 6803) >gi|1651983|dbj|BAA16909.1| (D90901)
perosamine synthetase [Synechocystis sp.]
Length = 378
Score = 181 bits (455), Expect = 1e-44
Identities = 104/273 (38%), Positives = 165/273 (60%), Gaps = 8/273 (2%)
Query: 6 KPIIEDEEINAVVNVLKSGMLAQGKE-VEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA 64
KP I + E+ + ++G + E + FE+ F +YLGV+++IA ++ T AL + + A
Sbjct: 10 KPSITELEVEYATDAARNGWGDRCYEYIVRFEEVFKKYLGVEYSIATSSCTGALHMGMAA 69
Query: 65 LKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILV 124
L IG GDEVI +IA+ I+ GAKPVF DI P ++ +DP + IT +TKAI+
Sbjct: 70 LGIGPGDEVILADTNWIATVAPIVHLGAKPVFVDILPDSWCIDPVLAEQAITPRTKAIVA 129
Query: 125 VHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTT 184
H+YG DM+A I + H + +IED A+A G+ + GK+ G+ G +FSF+ TK +TT
Sbjct: 130 THIYGNLCDMEALLAIEQRHGIPIIEDAAEAIGSVYHGKRAGSMGKFGSFSFHGTKTLTT 189
Query: 185 GEGGMVVTDNDELAERARLIRDH----GQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLD 240
GEGGM VT++ +L E + +H GQ +++ +G+ Y+M+NI AAIG AQ+++++
Sbjct: 190 GEGGMFVTNDPDLYETVLTLSNHGRARGQTKQFWADMVGFKYKMSNIQAAIGCAQMERIE 249
Query: 241 KWNEIRIKNAEILSRGIERIKGLTPPFVDPRVK 273
E+ + EILS E ++ L ++P K
Sbjct: 250 ---ELVSRKREILSYYKENLESLPGITMNPEPK 279
>gb|AAD28492.1|AF145039_4 (AF145039) aminotransferase spcS2 [Streptomyces spectabilis]
Length = 439
Score = 181 bits (454), Expect = 1e-44
Identities = 119/331 (35%), Positives = 183/331 (54%), Gaps = 34/331 (10%)
Query: 34 AFEKEFSEYLGVKHA--------IAVTNGTIALDVALKALKIGQGDEVITTPFTFIASAN 85
+FE+ FS+ HA + TNG+ AL +A++AL +G G EVI T++A A+
Sbjct: 56 SFERRFSDAFAAYHAAPGVTPYAVPTTNGSAALTIAMEALGVGPGTEVIVPGLTWVACAS 115
Query: 86 SILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHN 145
+ GA PV D+DP T ++ + +T +T+AILVVH Y AD+ AF+E+++
Sbjct: 116 AAHALGATPVLVDVDPHTLSISADAAKAAVTDRTRAILVVHAYCSGADVDAFQELSQSTG 175
Query: 146 LYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIR 205
+ +IEDC+QAHGAE+ G+KVGTFG I FS TK +T GEGG+V+T + EL +R + R
Sbjct: 176 IPVIEDCSQAHGAEWRGRKVGTFGTIGVFSLQQTKVLTCGEGGVVLTSSPELHDRLQQYR 235
Query: 206 DHG------------QAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEIL 253
+G + E VE G+N+ M+ AA+ +QL+ L++ + +R +NA +L
Sbjct: 236 ANGRRYTARPVAGRLELEDVGAVE-GHNHSMSEFHAAVALSQLEFLEEQSALRERNAAVL 294
Query: 254 SRGIERIKGL-TPPFVDPRVKHVFHQYVIRVE----DDYPLSR--DELAKELRNRGIGTA 306
+ + I G+ T P + ++ YVIR++ P+ R D ++ EL N T
Sbjct: 295 TDLLAGIPGVSTLPAPAGLTRRTYYDYVIRLDAQLLGPVPVDRVVDAMSAEL-NMFFET- 352
Query: 307 VHYPVPVHHQPLYQKLGYPRDICPNAIEASR 337
P++ PLY L PR P + EA R
Sbjct: 353 --LDTPLNANPLYVPLKSPR--TPGSDEARR 379
>pir||T46528 probable CDP-4-keto-6-deoxyglucose-3-dehydratase (E1) [imported] -
Streptomyces violaceoruber >gi|4218555|emb|CAA09644.1|
(AJ011500) putative
CDP-4-keto-6-deoxyglucose-3-dehydratase (E1)
[Streptomyces violaceoruber]
Length = 433
Score = 180 bits (451), Expect = 3e-44
Identities = 119/384 (30%), Positives = 184/384 (46%), Gaps = 38/384 (9%)
Query: 16 AVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKAL--------KI 67
A+V +A G + FE++F+ Y G++ A +G+ A +AL +L ++
Sbjct: 45 ALVEAALDLRIAAGPSTQRFERDFARYFGLRKAHMTNSGSSANLLALTSLTSHTLGDRRL 104
Query: 68 GQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHL 127
GDEVIT F + N I+ G PVF D++ T+N VL + +TKAI++ H
Sbjct: 105 RPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELGTYNTTAERVLAAVGPRTKAIMIAHA 164
Query: 128 YGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEG 187
G P + IA +H LYL+ED A G+ +G+ GTFGD+ SFYP ++TTGEG
Sbjct: 165 LGNPFPVADVAAIAAEHGLYLVEDNCDAVGSYHQGRLTGTFGDLTTTSFYPAHHITTGEG 224
Query: 188 GMVVTDNDELAERARLIRD---------------------------HGQAEKYLHVELGY 220
G V+T N LA +RD HG KY+ LGY
Sbjct: 225 GCVLTRNLALARIVEQLRDWGRDCWCEPGKDNTCFKRFDYQLGTLPHGYDHKYIFTHLGY 284
Query: 221 NYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYV 280
N + T+I AA+G +QL +LD + + R N + + G+ + GL P + +V
Sbjct: 285 NLKATDIQAALGVSQLSRLDSFGKARRANWQRMYEGLAGVPGLLLPRATEHSDPSWFGFV 344
Query: 281 IRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDI--CPNAIEASRK 338
+ V D +R L L +R IGT + + P YQ Y R + N+ +
Sbjct: 345 LTVLPDASFTRRGLEDFLGSRKIGTRRLFGGNLTRHPAYQDRDY-RVVGELTNSDVITEH 403
Query: 339 VLSLPVHPAVSREDLDYIIRTLEE 362
L + VHP+++ E +D++ ++ E
Sbjct: 404 TLWVGVHPSMTDEMVDHVAGSIRE 427
>pir||F64565 spore coat polysaccharide biosynthesis protein C - Helicobacter
pylori (strain 26695) >gi|2313467|gb|AAD07433.1|
(AE000553) spore coat polysaccharide biosynthesis
protein C [Helicobacter pylori 26695]
Length = 375
Score = 178 bits (448), Expect = 7e-44
Identities = 118/362 (32%), Positives = 190/362 (51%), Gaps = 9/362 (2%)
Query: 5 AKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA 64
++P ++ E+ AV+ VL S L QGK FE+ E+LGVKHA+ + T AL +
Sbjct: 7 SEPCLDKEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRN 66
Query: 65 LKIGQGD--EVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAI 122
D E+ITTP +F+A+AN +L G PVFA I N+D + + I +TKAI
Sbjct: 67 FSEFSADRNEIITTPISFVATANMLLESGYTPVFAGIK-NDGNIDELALEKLINERTKAI 125
Query: 123 LVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM 182
+ V G+ ++++ +++ + H+L + D + A G+E++ KKVG F + FSF+ K +
Sbjct: 126 VSVDYAGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPI 185
Query: 183 TTGEGGMVVTDNDELAERARLIRDHGQAEKYLH----VELGYNYRMTNIAAAIGRAQLKK 238
TT EGG VVT++ EL E+ +L R HG +K +G+N+R+ I +A+G +QLKK
Sbjct: 186 TTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKK 245
Query: 239 LDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKEL 298
+ R + A R + TP + K H Y I + + + + + L
Sbjct: 246 APFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESL 305
Query: 299 RNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIR 358
RGI VHY P++ LYQ+L + +A + +SLP H ++ E + I
Sbjct: 306 HKRGILAQVHYK-PIYQYQLYQQL-FNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAH 363
Query: 359 TL 360
++
Sbjct: 364 SV 365
>gb|AAD13547.1| (AF080235) NDP-hexose 3,4-dehydratase homolog [Streptomyces
cyanogenus]
Length = 434
Score = 177 bits (445), Expect = 1e-43
Identities = 117/393 (29%), Positives = 189/393 (47%), Gaps = 40/393 (10%)
Query: 8 IIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKAL-- 65
++++++ A+V +A G+ FE F+ + + A +G+ A +A AL
Sbjct: 38 VLDEDDRIALVEAALEMRIAAGRSSRKFESSFARKMKRRKAHLTNSGSSANLLATTALTS 97
Query: 66 ------KIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT 119
++ GDEVIT F + N IL G PVF D++ T+ + V + I KT
Sbjct: 98 HLLEDRRLRPGDEVITVAAGFPTTVNPILQNGLIPVFVDVELGTYKTTADRVAQAIGPKT 157
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
+AI++ H G P ++ ++A DH+L+LIED A G+ ++GK GTFG++ SFYP
Sbjct: 158 RAIIIAHTLGNPFEVAEIAQLAVDHDLFLIEDNCDAVGSTYDGKLTGTFGELTTVSFYPA 217
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQ---------------------------AEK 212
++T GEGG V+T + LA +RD G+ K
Sbjct: 218 HHLTMGEGGCVLTADLALARIVESLRDWGRDCWCEPGESDKCLKRFKYQMGTLPAGYDHK 277
Query: 213 YLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV 272
Y+ +GYN + T++ AA+G QL KLD + E R +N L G++ + L P PR
Sbjct: 278 YIFSHVGYNLKATDLQAALGLTQLAKLDDFVEARKRNWRRLRDGLDGVPHLLLPEATPRR 337
Query: 273 KHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNA 332
+ +V+ V D P R EL L R IGT + + P Y + P + N
Sbjct: 338 HPSWFGFVLTVSPDAPFKRAELVDFLEGRKIGTRRLFAGNLTRHPAY--IDQPHRVVGNL 395
Query: 333 IEA---SRKVLSLPVHPAVSREDLDYIIRTLEE 362
+ + + + V+P ++ E LDY+I +++E
Sbjct: 396 DNSDIITEQTFWVGVYPGLTDEMLDYVISSVKE 428
>gb|AAF18954.1|AF164515_3 (AF164515) Cps7G [Streptococcus suis]
Length = 404
Score = 173 bits (435), Expect = 2e-42
Identities = 120/392 (30%), Positives = 189/392 (47%), Gaps = 40/392 (10%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVA 61
IP + P I EI+ V++ LKSG + G + + E+ S + G + + + T L++
Sbjct: 7 IPFSPPDITQAEIDEVIDTLKSGWITTGPKTKELERRLSVFTGTNKTVCLNSATAGLELV 66
Query: 62 LKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKA 121
L+ L +G GDEVI T+ AS + I GA PV DI +F ++ + + + IT KTK
Sbjct: 67 LRILGVGPGDEVIVPAMTYTASCSVITHVGATPVMVDIQKNSFEMEYDALEKAITPKTKV 126
Query: 122 ILVVHLYGQPADMKAFREIAED-HNLY---------------LIEDCAQAHGAEFEGKKV 165
I+ V L G P D I E+ +LY ++ D A + GA ++GK
Sbjct: 127 IIPVDLAGIPCDYDKIYTIVENKRSLYVASDNKWQKLFGRVIILSDSAHSLGASYKGKPA 186
Query: 166 GTFGDIAAFSFYPTKNMTTGEGGMVV------TDNDELAERARLIRDHGQAE-------- 211
G+ D +FSF+ KN TT EGG V D++E+ + ++ HGQ +
Sbjct: 187 GSLADFTSFSFHAVKNFTTAEGGSVTWRSHPDLDDEEMYKEFQIYSLHGQTKDALAKTQL 246
Query: 212 ---KYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIE--RIKGLTPP 266
+Y V GY MT+I A IG QL++ R + E + G E IK L
Sbjct: 247 GSWEYDIVIPGYKCNMTDIMAGIGLVQLERYPSLLNRRREIIEKYNAGFEGTSIKPLVHL 306
Query: 267 FVDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHY-PVPVHHQPLYQKLGYP 325
D + H Y+ ++ R+E+ +++ GI VHY P+P+ Y+ LG+
Sbjct: 307 TEDKQSS--MHLYITHLQGYTLEQRNEVIQKMAEAGIACNVHYKPLPL--LTAYKNLGFE 362
Query: 326 RDICPNAIEASRKVLSLPVHPAVSREDLDYII 357
PNA + ++LP+H +S ED++Y+I
Sbjct: 363 MKDFPNAYQYFENEVTLPLHTNLSDEDVEYVI 394
>gb|AAD56748.1|AF125164_21 (AF125164) putative aminotransferase [Bacteroides fragilis]
Length = 376
Score = 172 bits (431), Expect = 7e-42
Identities = 119/348 (34%), Positives = 178/348 (50%), Gaps = 17/348 (4%)
Query: 29 GKEVEAFEKEFSEYLGV-KHAIAVTNGTIALDVALKALKIGQGDEVITTPFTFIASANSI 87
G V+AFE+ EYL ++ +A++ GT AL + L L + GDEVI FTF ASAN I
Sbjct: 33 GPNVDAFEQSLVEYLHEDRYVVALSAGTAALHLGLILLDVKPGDEVICQSFTFAASANPI 92
Query: 88 LFQGAKPVFADIDPKTFNLDP-------NDVLEKITSKTKAILVVHLYGQPADMKAFREI 140
+ AKPVF D + T+N+DP D L K KAI+ VHLYG PA M +I
Sbjct: 93 SYLEAKPVFVDSEKDTWNMDPVLLEEAIKDRLRKTGKLPKAIIPVHLYGMPAKMDEIMDI 152
Query: 141 AEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAER 200
A + + ++ED A+A G+E G+K GTFG++AA SF K +TT GG ++ +E A++
Sbjct: 153 AGRYGISVLEDAAEALGSELNGRKCGTFGELAALSFNGNKMITTSGGGALICRTEEEAKQ 212
Query: 201 ARLIRDHGQ--AEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIE 258
+ + A Y H +GYNYRM+NI A IGR Q+ L+ R + ++
Sbjct: 213 TKFYATQARDAAPHYQHTHIGYNYRMSNICAGIGRGQMYVLEDHIARRRAIHSLYVDLLK 272
Query: 259 RIKGLT-PPFVDPRVKHVFHQYVIRVEDDYP-LSRDELAKELRNRGIGTAVHYPVPVHHQ 316
+ G+T D R F I V+ SR+++ L + I T + P+H Q
Sbjct: 273 DVAGITVMENPDSRFASNFWLTCILVDPKLAGKSREDIRLRLDSENIETRPLWK-PMHLQ 331
Query: 317 PLYQKLG-YPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEEL 363
P++ Y + L LP P ++ ED+ ++ T+ ++
Sbjct: 332 PVFTDAPFYGNGTSERLFDIG---LCLPSGPTLTDEDIRRVVDTIRKM 376
>gb|AAC01730.1| (AF040570) dNTP-hexose dehydratase [Amycolatopsis mediterranei]
Length = 435
Score = 169 bits (425), Expect = 3e-41
Identities = 115/393 (29%), Positives = 189/393 (47%), Gaps = 40/393 (10%)
Query: 8 IIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKAL-- 65
+++ + A+V +A G FE F+ L + A+ +G+ A +AL L
Sbjct: 40 VLDAADREALVAAALDLRIASGTIATKFESSFARKLKRRKAVLTNSGSSANLLALSTLTS 99
Query: 66 ------KIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT 119
++ GDEV+T F + N IL G PVF DI+ T+N V I+ +T
Sbjct: 100 PTLGDEQLKPGDEVVTVAAGFPTTVNPILQNGMIPVFVDIELGTYNTTAERVEAAISPRT 159
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
+AI++ H G P + EIA+ H +LIED A G+ ++G+ GTFG + SFYP
Sbjct: 160 RAIMIAHTLGNPFPVAEIAEIAQRHGCHLIEDNCDAVGSTYQGQLTGTFGRFSTVSFYPA 219
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQ---------------------------AEK 212
++T GEGGM+++ + +LA+ A+ RD G+ K
Sbjct: 220 HHLTMGEGGMLLSSDIKLAKLAKSFRDWGRDCWCEPGEDDRCLKRFDLHLGTLPEAYDHK 279
Query: 213 YLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV 272
Y+ E+GYN + T+I AA+G +QL KL + + R +N L G++ + GL P P
Sbjct: 280 YVFSEVGYNLKSTDIHAALGLSQLAKLPDFVDARKRNWRQLREGLDGLPGLILPEATPGS 339
Query: 273 KHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDIC--- 329
+ ++I V+ D E+ + L R I T + + P Y +G P+ I
Sbjct: 340 DPSWFGFIITVKPDAGFDVPEVVEYLEARNIRTRRLFAGNLTRHPAY--IGKPQRIAGPL 397
Query: 330 PNAIEASRKVLSLPVHPAVSREDLDYIIRTLEE 362
N+ + + + V+P ++ E ++Y+I TL+E
Sbjct: 398 TNSDIVTERTFWIGVYPGITTEMIEYVIGTLKE 430
>pir||F70037 spore coat polysaccharide biosynthesis homolog yvfE - Bacillus
subtilis >gi|1495293|emb|CAA96482.1| (Z71928)
hypothetical protein [Bacillus subtilis]
>gi|1945704|emb|CAB07998.1| (Z94043) hypothetical
protein [Bacillus subtilis] >gi|2635936|emb|CAB15428.1|
(Z99121) similar to spore coat polysaccharide
biosynthesis [Bacillus subtilis]
Length = 301
Score = 169 bits (424), Expect = 4e-41
Identities = 96/255 (37%), Positives = 153/255 (59%), Gaps = 11/255 (4%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQ-GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
I ++ P + E + + +S +A G V +FE++ +E +GVK A AV +GT A+ +
Sbjct: 5 IYLSPPHMSGREQHYISEAFRSNWIAPLGPLVNSFEEQLAERVGVKAAAAVGSGTAAIHL 64
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT- 119
AL+ L++ +GD V FTF+A+AN IL++ A PVF D +P T+N+ P LE+ +
Sbjct: 65 ALRLLEVKEGDSVFCQSFTFVATANPILYEKAVPVFIDSEPDTWNMSPT-ALERALEEAK 123
Query: 120 ------KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAA 173
KA++ V+LYGQ A M + + + + +IED A++ G ++GK+ GTFG
Sbjct: 124 RNGTLPKAVIAVNLYGQSAKMDEIVSLCDAYGVPVIEDAAESLGTVYKGKQSGTFGRFGI 183
Query: 174 FSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQ--AEKYLHVELGYNYRMTNIAAAI 231
FSF K +TT GGM+V++++ E+AR + + A Y H E+G+NYR++NI A +
Sbjct: 184 FSFNGNKIITTSGGGMLVSNDEAAIEKARFLASQAREPAVHYQHSEIGHNYRLSNILAGV 243
Query: 232 GRAQLKKLDKWNEIR 246
G AQL+ LD+ E R
Sbjct: 244 GIAQLEVLDERVEKR 258
>gb|AAF33462.1| (AF233324) 92% identity with E. coli lipopolysaccharide
biosynthesis protein (WECE) (SP:P27833); contains
similarity to Pfam family PF01041 (DegT/DnrJ/EryC1/StrS
family), score=295.0, E=9.2e-85, N=1 [Salmonella
typhimurium LT2]
Length = 376
Score = 168 bits (421), Expect = 1e-40
Identities = 115/374 (30%), Positives = 184/374 (48%), Gaps = 17/374 (4%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLA-QGKEVEAFEKEFSEYLGVKHAIAVTNGTIALD 59
MIP P + E+ + + + SG L G ++ ++ G + + T +L+
Sbjct: 1 MIPFNAPPVVGTELEYMQSAMSSGKLCGDGGFTRRCQQWLEQHFGSAKVLLTPSCTASLE 60
Query: 60 VALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT 119
+A L I GDEVI FTF+++AN+ + +GAK VF DI P T N+D + IT KT
Sbjct: 61 MAALLLDIQPGDEVIMPSFTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITDKT 120
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
+AI+ VH G +M +A+ +NL+++ED AQ + ++G+ +GT G I FSF+ T
Sbjct: 121 RAIVPVHYAGVACEMDVIMALADKYNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHET 180
Query: 180 KNMTT-GEGGMVVTDNDELAERARLIRD---------HGQAEKYLHVELGYNYRMTNIAA 229
KN T GEGG + ++ L ERA +IR+ GQ +KY ++G +Y M+++ A
Sbjct: 181 KNYTAGGEGGATLINDRTLIERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQA 240
Query: 230 AIGRAQLKKLDKWNEIRIKNAEILSRG---IERIKGLTPPFVDPRVKHVFHQYVIRVEDD 286
A AQL+ D+ N+ R+ + + R P + H H + I++ D
Sbjct: 241 AYLWAQLEAADRINQQRLSLWQTYYDALTPLARAGRFELPSIPENCGHNAHMFYIKLRD- 299
Query: 287 YPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHP 346
R L L+ I HY +P+H P K G + S ++L LP+
Sbjct: 300 -IADRSALINFLKEAEIMAVFHY-IPLHDCPAGDKFGEFIGDDVYTTKESERLLRLPLFY 357
Query: 347 AVSREDLDYIIRTL 360
++ D +I TL
Sbjct: 358 NLAPVDQRTVITTL 371
>gb|AAC68684.1| (AF079762) 4-dehydrase [Streptomyces venezuelae]
Length = 415
Score = 167 bits (418), Expect = 2e-40
Identities = 112/329 (34%), Positives = 166/329 (50%), Gaps = 11/329 (3%)
Query: 29 GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFTFIASANSIL 88
G V FE+ + GV+HA+A N T L + A G EVI TF A+ +++
Sbjct: 51 GPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAA--GLTGEVIMPSMTFAATPHALR 108
Query: 89 FQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYL 148
+ G PVFADIDP T NLDP+ V +T +T A++ VHL+G+P R++A++H L L
Sbjct: 109 WIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGVHLWGRPCAADQLRKVADEHGLRL 168
Query: 149 IEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHG 208
D A A G +G+ G+ GD FSF+ TK + EGG VVTD+ +LA R R + + G
Sbjct: 169 YFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFG 228
Query: 209 QAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFV 268
G N +M+ AAA+G L LD + E+ +N + E + L V
Sbjct: 229 FDLPGGSPAGGTNAKMSEAAAAMG---LTSLDAFPEVIDRNRRNHAAYREHLADLPGVLV 285
Query: 269 DPRVKHVF--HQYVIRVEDDYP--LSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGY 324
+H HQYVI D+ + RD + + L+ G+ T ++ H Y+ G
Sbjct: 286 ADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYR--GQ 343
Query: 325 PRDICPNAIEASRKVLSLPVHPAVSREDL 353
P P+ + +VLSLP A+ +D+
Sbjct: 344 PHAPLPHTERLAARVLSLPTGTAIGDDDI 372
>pir||T51108 dehydratase [imported] - Streptomyces antibioticus (ATCC 11891)
>gi|5902172|gb|AAD55456.1| (AF055579) dehydratase
[Streptomyces antibioticus]
Length = 393
Score = 165 bits (414), Expect = 6e-40
Identities = 113/327 (34%), Positives = 171/327 (51%), Gaps = 9/327 (2%)
Query: 29 GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFTFIASANSIL 88
G V FE+ ++ GV++ +A N T L + L+ ++ EVI TF+A+A+++
Sbjct: 51 GPLVREFEQRIADLAGVRNCVATCNATAGLQLLLREAEVT--GEVIMPSMTFVATAHAVR 108
Query: 89 FQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYL 148
+ G +PVF DIDP T LDP V +T +T AIL VHL+G+P+ + IA +H L L
Sbjct: 109 WLGLRPVFCDIDPDTGCLDPKLVEAAVTPRTGAILGVHLWGRPSRVDELAAIAAEHGLKL 168
Query: 149 IEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHG 208
D A A G +++G+FGD FSF+ TK + + EGG +VTD+D AER R + + G
Sbjct: 169 FYDAAHALGCTSRQRRLGSFGDAEVFSFHATKVVNSFEGGGIVTDDDTRAERLRALHNFG 228
Query: 209 QAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFV 268
V G N +M+ AAA+G L+ N E+ + + + G+
Sbjct: 229 LGHD--GVGAGINAKMSEAAAAMGLTSLEAFADAVASNRANYELYRQELSGLPGVRLIDY 286
Query: 269 DPRVKHVFHQYVIRVEDD--YPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPR 326
DP ++ +H YVI + D L RD L LR + A Y P HQ + +P
Sbjct: 287 DPAERNNYH-YVIALIDAGVTGLHRDLLLTLLRAENV-VAQPYFSPGCHQREPYRTEHPV 344
Query: 327 DICPNAIEASRKVLSLPVHPAVSREDL 353
+ P+ + +V++LP PAVSRED+
Sbjct: 345 SL-PHTEHLAEQVIALPTGPAVSREDI 370
>emb|CAA70012.1| (Y08763) L-glutamine:scyllo-inosose aminotransferase [Streptomyces
griseus]
Length = 424
Score = 163 bits (408), Expect = 3e-39
Identities = 103/296 (34%), Positives = 158/296 (52%), Gaps = 21/296 (7%)
Query: 11 DEEINAVVNVLKSGMLA-----QGKEV--EAFEKEFSEYLGVKHAIAVTNGTIALDVALK 63
D + ++ +VL SG QG++ F F++Y G + ++ GT +L +AL+
Sbjct: 26 DRALKSLEDVLTSGRWTISCAYQGRDSYERQFASAFADYCGSAMCVPISTGTASLAIALE 85
Query: 64 ALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAIL 123
A +G GDEVI +++ASA+++L A PV D+DP T+ LDP IT +T+AI
Sbjct: 86 ACGVGAGDEVIVPGLSWVASASAVLGINAVPVLVDVDPATYCLDPAATEAAITERTRAIT 145
Query: 124 VVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMT 183
VVH Y AD+ A +IA H L LIEDCA AHGA F G+ VG G FS +K +T
Sbjct: 146 VVHAYSAVADLDALLDIARRHGLPLIEDCAHAHGAGFRGRPVGAHGAAGVFSMQGSKLLT 205
Query: 184 TGEGGMVVTDNDELAERARLIRDHGQAEKYLHV------------ELGYNYRMTNIAAAI 231
GEGG +VTD+ ++A RA +R G+ + V +G N ++ AA+
Sbjct: 206 CGEGGALVTDDADVALRAEHLRADGRVVRREPVGVGEMELEETGRMMGSNACLSEFHAAV 265
Query: 232 GRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDP-RVKHVFHQYVIRVEDD 286
QL+ LD N R + A+ L+ + + G+T P +++Y++R+ D+
Sbjct: 266 LLDQLELLDGQNARRTRAADHLTDRLSEL-GMTAQATAPGTTARAYYRYLVRLPDE 320
>gb|AAF59937.1| (AF237895) 3,4-dehydratase-like protein [Streptomyces antibioticus]
Length = 393
Score = 163 bits (408), Expect = 3e-39
Identities = 111/327 (33%), Positives = 170/327 (51%), Gaps = 9/327 (2%)
Query: 29 GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFTFIASANSIL 88
G V FE+ ++ GV++ +A N T L + L+ ++ EVI TF+A+A+++
Sbjct: 51 GPLVREFEQRIADLAGVRNCVATCNATAGLQLLLREAEVT--GEVIMPSMTFVATAHAVR 108
Query: 89 FQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYL 148
+ G +PVF DIDP T LDP V +T +T AIL VHL+G+P+ + IA +H L L
Sbjct: 109 WLGLRPVFCDIDPDTGCLDPKLVEAAVTPRTGAILGVHLWGRPSPVDELAAIAAEHGLKL 168
Query: 149 IEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHG 208
D A A G +++G+FGD FSF+ TK + + EGG +VTD+D A+ R + + G
Sbjct: 169 FYDAAHALGCTSRQRRLGSFGDAEVFSFHATKVVNSFEGGGIVTDDDTPADALRALHNFG 228
Query: 209 QAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFV 268
V G N +M+ AAA+G L+ N E+ + + + G+
Sbjct: 229 LGHD--GVGAGINAKMSEAAAAMGLTSLEAFADAVASNRANYELYRQELSGLPGVRLSSY 286
Query: 269 DPRVKHVFHQYVIRVEDD--YPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPR 326
DP ++ +H YVI + D L RD L LR + A Y P HQ + +P
Sbjct: 287 DPAERNNYH-YVIALIDAGVTGLHRDLLLTLLRAENV-VAQPYFSPGCHQREPYRTEHPV 344
Query: 327 DICPNAIEASRKVLSLPVHPAVSREDL 353
+ P+ + +V++LP PAVSRED+
Sbjct: 345 SL-PHTEHLAEQVIALPTGPAVSREDI 370
>sp|P27833|RFFA_ECOLI LIPOPOLYSACCHARIDE BIOSYNTHESIS PROTEIN RFFA
>gi|7427874|pir||B65183 probable hydro-lyase (EC
4.2.1.-) - Escherichia coli (strain K-12)
>gi|2367285|gb|AAC76796.1| (AE000455) putative regulator
[Escherichia coli K12]
Length = 376
Score = 160 bits (401), Expect = 2e-38
Identities = 111/374 (29%), Positives = 184/374 (48%), Gaps = 17/374 (4%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLA-QGKEVEAFEKEFSEYLGVKHAIAVTNGTIALD 59
MIP P + E++ + + + SG L G ++ + G + + T +L+
Sbjct: 1 MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTASLE 60
Query: 60 VALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT 119
+A L I GDEVI +TF+++AN+ + +GAK VF D+ P T N+D + IT KT
Sbjct: 61 MAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRPDTMNIDETLIEAAITDKT 120
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
+ I+ VH G +M +A+ HNL+++ED AQ + ++G+ +GT G I FSF+ T
Sbjct: 121 RVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHET 180
Query: 180 KNMTT-GEGGMVVTDNDELAERARLIRD---------HGQAEKYLHVELGYNYRMTNIAA 229
KN T GEGG + ++ L ERA +IR+ GQ +KY ++G +Y M+++ A
Sbjct: 181 KNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQA 240
Query: 230 AIGRAQLKKLDKWNEIRI---KNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDD 286
A AQL+ D+ N+ R+ +N + + + P + H + I++ D
Sbjct: 241 AYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGRIELPSIPDGCVQNAHMFYIKLRDI 300
Query: 287 YPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICPNAIEASRKVLSLPVHP 346
R L L+ I HY +P+H P + G + S ++L LP+
Sbjct: 301 D--DRSALINFLKEAEIMAVFHY-IPLHGCPAGEHFGEFHGEDRYTTKESERLLRLPLFY 357
Query: 347 AVSREDLDYIIRTL 360
+S + +I TL
Sbjct: 358 NLSPVNQRTVIATL 371
>emb|CAA72359.1| (Y11648) wlaK [Campylobacter jejuni]
Length = 386
Score = 157 bits (394), Expect = 1e-37
Identities = 88/244 (36%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 4 IAKPIIEDEEINAVVNVLKSGMLAQ-GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVAL 62
++ P + E+ + V KS +A G+ V FE+ +Y ++A+A+ + T AL +AL
Sbjct: 5 LSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKSENALALNSATAALHLAL 64
Query: 63 KALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDV---LEKITSKT 119
+ + Q D V+ + FTFIAS I + AKPVF D D +T+N+D + + +++ K
Sbjct: 65 RVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCD-ETYNIDVDLLKLAIKECEKKP 123
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
KA+++ HLYG A M EI +++ + LIED A+A G+ ++ K +GTFG+ A+S+
Sbjct: 124 KALILTHLYGNAAKMDEIVEICKENEIVLIEDAAEALGSFYKNKALGTFGEFGAYSYNGN 183
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQAE--KYLHVELGYNYRMTNIAAAIGRAQLK 237
K +TT GGM++ N E E+AR + Y H++ GYNYR++N+ AIG AQ++
Sbjct: 184 KIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQME 243
Query: 238 KLDK 241
L++
Sbjct: 244 VLEQ 247
>gb|AAD09298.1| (AF001497) aminotransferase homolog [Campylobacter jejuni]
Length = 386
Score = 157 bits (394), Expect = 1e-37
Identities = 88/244 (36%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 4 IAKPIIEDEEINAVVNVLKSGMLAQ-GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVAL 62
++ P + E+ + V KS +A G+ V FE+ Y ++A+A+ + T AL +AL
Sbjct: 5 LSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKAYSKSENALALNSATAALHLAL 64
Query: 63 KALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDV---LEKITSKT 119
+ + Q D V+ + FTFIAS I + AKPVF D D +T+N+D + + +++ K
Sbjct: 65 RVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCD-ETYNIDVDLLKLAIKECEKKP 123
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
KA+++ HLYG A M EI +++ + LIED A+A G+ ++ K +GTFG+ A+S+
Sbjct: 124 KALILTHLYGNAAKMDEIVEICKENEIVLIEDAAEALGSFYKNKALGTFGEFGAYSYNGN 183
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQAE--KYLHVELGYNYRMTNIAAAIGRAQLK 237
K +TT GGM++ +N E E+AR + Y H++ GYNYR++N+ AIG AQ++
Sbjct: 184 KIITTSGGGMLIGENKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQME 243
Query: 238 KLDK 241
L++
Sbjct: 244 VLEQ 247
>gb|AAD51387.1|AF108897_5 (AF108897) PglE [Campylobacter jejuni]
Length = 386
Score = 157 bits (394), Expect = 1e-37
Identities = 88/244 (36%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 4 IAKPIIEDEEINAVVNVLKSGMLAQ-GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVAL 62
++ P + E+ + V KS +A G+ V FE+ +Y ++A+A+ + T AL +AL
Sbjct: 5 LSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKSENALALNSATAALHLAL 64
Query: 63 KALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDV---LEKITSKT 119
+ + Q D V+ + FTFIAS I + AKPVF D D +T+N+D + + +++ K
Sbjct: 65 RVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCD-ETYNIDVDLLKLAIKECEKKP 123
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
KA+++ HLYG A M EI +++ + LIED A+A G+ ++ K +GTFG+ A+S+
Sbjct: 124 KALILTHLYGNAAKMDEIVEICKENEIVLIEDAAEALGSFYKNKALGTFGEFGAYSYNGN 183
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQAE--KYLHVELGYNYRMTNIAAAIGRAQLK 237
K +TT GGM++ N E E+AR + Y H++ GYNYR++N+ AIG AQ++
Sbjct: 184 KIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQME 243
Query: 238 KLDK 241
L++
Sbjct: 244 VLEQ 247
>emb|CAA69113.1| (Y07786) ORF43x9 [Vibrio cholerae] >gi|3724308|dbj|BAA33597.1|
(AB012956) probable
CDP-4-keto-6-deoxy-D-glucose-3-dehydrogena se [Vibrio
cholerae]
Length = 390
Score = 157 bits (392), Expect = 2e-37
Identities = 104/330 (31%), Positives = 168/330 (50%), Gaps = 35/330 (10%)
Query: 4 IAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALK 63
+A + E A+ V++S M GKEV +EK+F+ + G ++A+ V++G+ A + +
Sbjct: 6 LASSTWDQNEYAAIQRVIESDMFTMGKEVAQYEKDFATFFGAQYALMVSSGSTANLLMIA 65
Query: 64 AL--------KIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKI 115
AL K+ +GDEVI ++ + + G K F DID +T N+D + + I
Sbjct: 66 ALFFTKNAKYKLERGDEVIVPAVSWSTTYFPLQQYGLKVKFVDIDRQTLNMDLDKLEAAI 125
Query: 116 TSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFS 175
T T+AIL V+L G P D ++I D +++++ED ++ GA GK+ GTFG + FS
Sbjct: 126 TDNTRAILSVNLLGNPNDFARMKDIIADRDIFILEDNCESMGATINGKQAGTFGVMGTFS 185
Query: 176 FYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQA-------------------EKYLHV 216
+ + ++ T EGG VVTD++EL IR HG E + V
Sbjct: 186 SFFSHHIATMEGGCVVTDDEELYHILLCIRAHGWTRNLPKFNKVTGEKSDDAFEESFKFV 245
Query: 217 ELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV---K 273
GYN R ++ A+G QLKKL + E R KNAE+ PF++ + +
Sbjct: 246 LPGYNVRPLEMSGALGIEQLKKLPNFIETRRKNAELFQSLF-----ADHPFIEIQKETGE 300
Query: 274 HVFHQYVIRVEDDYPLSRDELAKELRNRGI 303
+ + + ++++ P SR EL K+L GI
Sbjct: 301 SSWFGFSLILKENAPYSRAELVKKLVENGI 330
>gb|AAD09304.1| (AF001498) aminotransferase homolog [Campylobacter jejuni]
Length = 386
Score = 156 bits (391), Expect = 3e-37
Identities = 87/244 (35%), Positives = 145/244 (58%), Gaps = 7/244 (2%)
Query: 4 IAKPIIEDEEINAVVNVLKSGMLAQ-GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVAL 62
++ P + E+ + V KS +A G+ V FE+ +Y ++A+A+ + T AL +AL
Sbjct: 5 LSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKSENALALNSATAALHLAL 64
Query: 63 KALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDV---LEKITSKT 119
+ + Q D V+ + FTFIAS I + AKPVF D D +T+N+D + + +++ K
Sbjct: 65 RVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCD-ETYNIDVDLLKLAIKECEKKP 123
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
KA+++ HLYG A M EI +++++ LIED A+A G+ ++ K +GTFG+ +S+
Sbjct: 124 KALILTHLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGN 183
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQAE--KYLHVELGYNYRMTNIAAAIGRAQLK 237
K +TT GGM++ N E E+AR + Y H++ GYNYR++N+ AIG AQ++
Sbjct: 184 KIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQME 243
Query: 238 KLDK 241
L++
Sbjct: 244 VLEQ 247
>pir||D81316 probable aminotransferase (degT family) Cj1121c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968555|emb|CAB73376.1| (AL139077) putative
aminotransferase (degT family) [Campylobacter jejuni]
Length = 386
Score = 156 bits (391), Expect = 3e-37
Identities = 88/244 (36%), Positives = 144/244 (58%), Gaps = 7/244 (2%)
Query: 4 IAKPIIEDEEINAVVNVLKSGMLAQ-GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVAL 62
++ P + E+ + V KS +A G+ V FE+ Y ++A+A+ + T AL +AL
Sbjct: 5 LSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKAYSKSENALALNSATAALHLAL 64
Query: 63 KALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDV---LEKITSKT 119
+ + Q D V+ + FTFIAS I + AKPVF D D +T+N+D + + +++ K
Sbjct: 65 RVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCD-ETYNIDVDLLKLAIKECEKKP 123
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
KA+++ HLYG A M EI +++ + LIED A+A G+ ++ K +GTFG+ A+S+
Sbjct: 124 KALILTHLYGNAAKMDEIVEICKENEIVLIEDAAEALGSFYKNKALGTFGEFGAYSYNGN 183
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQAE--KYLHVELGYNYRMTNIAAAIGRAQLK 237
K +TT GGM++ N E E+AR + Y H++ GYNYR++N+ AIG AQ++
Sbjct: 184 KIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQME 243
Query: 238 KLDK 241
L++
Sbjct: 244 VLEQ 247
>pir||T44324 hypothetical protein wbfI [imported] - Vibrio cholerae
>gi|3721678|dbj|BAA33628.1| (AB012957) probable
CDP-4-keto-6-deoxy-D-glucose-3-dehydrogena se [Vibrio
cholerae]
Length = 390
Score = 154 bits (386), Expect = 1e-36
Identities = 104/330 (31%), Positives = 166/330 (49%), Gaps = 35/330 (10%)
Query: 4 IAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALK 63
+A + E A+ V++S M GKEV +EK+F+ + G ++A+ V++G+ A + +
Sbjct: 6 LASSTWDQHEYAAIQRVIESDMFTMGKEVAQYEKDFATFFGAQYALMVSSGSTANLLMIA 65
Query: 64 AL--------KIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKI 115
AL K+ +GDEVI ++ + + G K F DID +T N+D + + I
Sbjct: 66 ALFFTKNAKYKLKRGDEVIVPAVSWSTTYFPLQQYGLKVKFVDIDRQTLNMDLDKLEAAI 125
Query: 116 TSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFS 175
T T+AIL V+L G P D EI +++++ED ++ GA GK+ GTFG + FS
Sbjct: 126 TDNTRAILSVNLLGNPNDFARMNEIIAGRDIFILEDNCESMGATLNGKQAGTFGVMGTFS 185
Query: 176 FYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQA-------------------EKYLHV 216
+ + ++ T EGG VVTD++EL IR HG E + V
Sbjct: 186 SFFSHHIATMEGGCVVTDDEELYHILLCIRAHGWTRNLPKFNKVTGEKSDDAFEESFKFV 245
Query: 217 ELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV---K 273
GYN R ++ A+G QLKKL + E R KNAE+ PF++ + +
Sbjct: 246 LPGYNVRPLEMSGALGIEQLKKLPNFIETRRKNAELFQSLF-----ADHPFIEIQKETGE 300
Query: 274 HVFHQYVIRVEDDYPLSRDELAKELRNRGI 303
+ + + ++++ P SR EL K+L GI
Sbjct: 301 SSWFGFSLILKENAPYSRAELVKKLVENGI 330
>pir||S30685 hypothetical protein o299 - Escherichia coli
>gi|148194|gb|AAA67591.1| (M87049) possibly rffA or rffC
[Escherichia coli]
Length = 299
Score = 153 bits (382), Expect = 4e-36
Identities = 88/258 (34%), Positives = 142/258 (54%), Gaps = 11/258 (4%)
Query: 1 MIPIAKPIIEDEEINAVVNVLKSGMLA-QGKEVEAFEKEFSEYLGVKHAIAVTNGTIALD 59
MIP P + E++ + + + SG L G ++ + G + + T +L+
Sbjct: 1 MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTASLE 60
Query: 60 VALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT 119
+A L I GDEVI +TF+++AN+ + +GAK VF D+ P T N+D + IT KT
Sbjct: 61 MAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRPDTMNIDETLIEAAITDKT 120
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
+ I+ VH G +M +A+ HNL+++ED AQ + ++G+ +GT G I FSF+ T
Sbjct: 121 RVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHET 180
Query: 180 KNMTT-GEGGMVVTDNDELAERARLIRD---------HGQAEKYLHVELGYNYRMTNIAA 229
KN T GEGG + ++ L ERA +IR+ GQ +KY ++G +Y M+++ A
Sbjct: 181 KNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQA 240
Query: 230 AIGRAQLKKLDKWNEIRI 247
A AQL+ D+ N+ R+
Sbjct: 241 AYLWAQLEAADRINQQRL 258
>emb|CAA70010.1| (Y08763) L-alanine:N-amidino-3-keto-scyllo- inosamine
aminotransferase [Streptomyces griseus]
Length = 410
Score = 153 bits (382), Expect = 4e-36
Identities = 86/218 (39%), Positives = 125/218 (56%), Gaps = 6/218 (2%)
Query: 28 QGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFTFIASANSI 87
+G+ V FE+ ++ G H + V +GT AL AL L IG GDEVI + F+AS ++
Sbjct: 36 EGEWVRRFEQAAADRFGAAHCLGVNSGTSALVAALVGLGIGPGDEVIVPGYMFVASIAAV 95
Query: 88 LFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHNLY 147
L GA V A++D + LDP DV +IT +T+A++ VH+ G PADM A R +A++H L+
Sbjct: 96 LHCGADVVLAEVDD-SLTLDPADVRARITPRTRAVMPVHMLGAPADMTALRAVADEHGLH 154
Query: 148 LIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDH 207
L+EDCAQ+ G + G+ +GT G FS K +T+ +GG V+ D+ + +RA D
Sbjct: 155 LLEDCAQSAGGSYRGRPLGTLGSAGTFSLNHYKMITSLQGGFVLMDDPLVFQRAYSFHDQ 214
Query: 208 G-----QAEKYLHVELGYNYRMTNIAAAIGRAQLKKLD 240
G Q LG N + + AA+ AQL KLD
Sbjct: 215 GWFPYRQDRGEGDPLLGMNLGLGELNAAVALAQLGKLD 252
>gb|AAC44885.1| (AF078736) WbdK [Escherichia coli] >gi|1584632|prf||2123305E ORF
7.7 [Escherichia coli]
Length = 388
Score = 149 bits (373), Expect = 4e-35
Identities = 96/292 (32%), Positives = 152/292 (51%), Gaps = 30/292 (10%)
Query: 3 PIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVAL 62
P+A ++ E A+ +V+ S M GK+VE +EK F++ G K+A+ V++G+ A + +
Sbjct: 5 PLASNTWDEYEYAAIQSVIDSKMFTMGKKVELYEKNFADLFGSKYAVMVSSGSTANLLMI 64
Query: 63 KAL------KIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKIT 116
AL K+ +GDE+I ++ + + G K F DI+ +T N+D + + I+
Sbjct: 65 AALFFTNKPKLKRGDEIIVPAVSWSTTYYPLQQYGLKVKFVDINKETLNIDIDSLKNAIS 124
Query: 117 SKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSF 176
KTKAIL V+L G P D EI + ++ L+ED ++ GA F+ K+ GTFG + FS
Sbjct: 125 DKTKAILTVNLLGNPNDFAKINEIINNRDIILLEDNCESMGAVFQNKQAGTFGVMGTFSS 184
Query: 177 YPTKNMTTGEGGMVVTDNDELAERARLIRDHGQA-------------------EKYLHVE 217
+ + ++ T EGG VVTD++EL +R HG E + V
Sbjct: 185 FYSHHIATMEGGCVVTDDEELYHVLLCLRAHGWTRNLPKENMVTGTKSDDIFEESFKFVL 244
Query: 218 LGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVD 269
GYN R ++ AIG QLKKL + R NA+ +++ K PF+D
Sbjct: 245 PGYNVRPLEMSGAIGIEQLKKLPGFISTRRSNAQYF---VDKFK--DHPFLD 291
>gb|AAD44154.1|AF125322_5 (AF125322) VioA [Escherichia coli]
Length = 371
Score = 149 bits (372), Expect = 5e-35
Identities = 110/369 (29%), Positives = 194/369 (51%), Gaps = 17/369 (4%)
Query: 2 IPIAKPIIED--EEINAVVNVLKSGMLAQ-GKEVEAFEKEFSEYLGVKHAIAVTNGTIAL 58
IP+ +P + + E + + + K+ L G + E++ E+LGV+H N TIAL
Sbjct: 6 IPVTQPSLPELAEFMPYLEKIWKNKWLTNNGPFHQELEEKLCEFLGVQHISLFNNATIAL 65
Query: 59 DVALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSK 118
AL+AL+I EVITTP++F+A++++IL+ G PVF DI+ +N+D + + IT K
Sbjct: 66 ITALQALRIT--GEVITTPYSFVATSHAILWNGLTPVFVDIENDGYNIDYRKIEQAITPK 123
Query: 119 TKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYP 178
T AIL VH Y P +++ ++IA+++ L +I D A A G F+G KV + + + F
Sbjct: 124 TSAILPVHCYSTPCEVEEIQKIADNYGLKVIYDAAHAFGVNFKGGKV--YLTMVIYQFLV 181
Query: 179 T---KNMTTGEGGMVVTDNDELAERARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQ 235
+ K+ EGG +++ + + R +++ G A++ G N +M+ I AA G Q
Sbjct: 182 SMRRKSSINFEGGAIISPDAKTKLRIDRLKNFGIADELTVTAPGINGKMSEINAAFGLVQ 241
Query: 236 LKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDP---RVKHVFHQYVIRVEDDYPLSRD 292
LK ++ R K + L R + +KG + P + + I ++D + +SRD
Sbjct: 242 LKHIEGSISKR-KIIDSLYRNL--LKGTPGITIFPGNINTNSNYSYFPILIDDGFHMSRD 298
Query: 293 ELAKELRNRGIGTAVHYPVPVHHQPLYQKL-GYPRDICPNAIEASRKVLSLPVHPAVSRE 351
+ + L+ I + ++ + + P+Y+ L D P A + KVL LP++ ++ E
Sbjct: 299 QAYELLKKNNILSRKYFYPLISNMPMYRGLISASVDNLPIANSVADKVLCLPIYTDLNEE 358
Query: 352 DLDYIIRTL 360
+ I + L
Sbjct: 359 IVVKITKLL 367
>pir||S77445 3-amino-5-hydroxybenzoic acid synthase - Synechocystis sp. (strain
PCC 6803) >gi|1652370|dbj|BAA17292.1| (D90905)
3-amino-5-hydroxybenzoic acid synthase [Synechocystis
sp.]
Length = 378
Score = 147 bits (368), Expect = 2e-34
Identities = 114/339 (33%), Positives = 174/339 (50%), Gaps = 30/339 (8%)
Query: 9 IEDEEINAVVN----VLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVALKA 64
I D+EI ++ +LKSG L G + FE+ F+E++G K+AI+V +GT L++ L+
Sbjct: 12 ISDDEIEFFLDEARQILKSGTLILGNHTQEFERGFAEFVGTKNAISVNSGTSGLEILLR- 70
Query: 65 LKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT----- 119
LK + V+ T A+ S+L + + D+DPKTF V E + K+
Sbjct: 71 LKQAENTTVLVPTNTNFATVASVLRVNSDVQYLDMDPKTFAPSLAMVKEAVEGKSYPKPL 130
Query: 120 KAILVVHLYGQPA-DMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYP 178
+ VH+ G + + A + LY+ ED A AHG++ +GK+ G D A+FSF+P
Sbjct: 131 SGVFWVHIGGVISPEFPAVVDYCHGKGLYVWEDTAHAHGSQLQGKQAGNLADGASFSFFP 190
Query: 179 TKNMTTGEGGMVVTDNDELAERARLIRDHGQAEKY---LHVELGYNYRMTNIAAAIGRAQ 235
TK MTT EGGMV ++DE AR +R+ G+ LH + G + RMT I A +G+
Sbjct: 191 TKVMTTFEGGMVTLNDDEEDTIARSLRNQGKRGMNFGGLHTDFGNSTRMTEIHALLGQIH 250
Query: 236 LKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRV---EDDYPLS-R 291
L KL++ R K E+++ + R G+ FV QY + V E P +
Sbjct: 251 LAKLERMLATRQKAYELITTPL-REAGI--EFVSTDHMDRASQYKLMVLLPEGKTPAQMK 307
Query: 292 DELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDICP 330
+ LA E G GT Y +P H QP++ +D+CP
Sbjct: 308 EALAAEEIYLG-GTV--YEIPCHLQPVF------KDVCP 337
>pir||E81275 probable aminotransferase (degT family) Cj1320 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968754|emb|CAB73747.1| (AL139078) putative
aminotransferase (degT family) [Campylobacter jejuni]
Length = 384
Score = 147 bits (368), Expect = 2e-34
Identities = 93/271 (34%), Positives = 147/271 (53%), Gaps = 20/271 (7%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQ-GKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
I + +P E ++ + SG ++ G+ V FE+ E + IA GT AL +
Sbjct: 18 IALHEPCFIGNEKKYLLECIDSGFVSSVGEFVTRFEEALKEKTKARFVIATNTGTAALHI 77
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKT- 119
AL A I + EVIT +F+A+AN+I + GAKPVF DID T +L P + + ++T
Sbjct: 78 ALLANGIDENCEVITQSISFVATANAIAYTGAKPVFLDIDENTLSLSPKALEHFLENQTY 137
Query: 120 ---------------KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKK 164
KA +++H +G A +KA +E+ E +++ LIED A+A G+ +E K
Sbjct: 138 QKDNLSYNKTTHKLIKACVIMHTFGLSAHIKAIKELCEKYHILLIEDAAEALGSTYENKA 197
Query: 165 VGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQAE---KYLHVELGYN 221
+GTFG SF K +T G GG +++D++ LA+ AR + + +Y H + YN
Sbjct: 198 LGTFGKCGILSFNGNKIITGGCGGAILSDDENLAKLARHLSTTAKIPHPYEYDHDRIAYN 257
Query: 222 YRMTNIAAAIGRAQLKKLDKWNEIRIKNAEI 252
YR+ NI AAI A L+ L+ + E + + A+I
Sbjct: 258 YRLCNINAAILFAGLENLELFLENKRELAKI 288
>gb|AAG35231.1| (AF176369) putative pyridoxamine 5-phosphate-dependent dehydrase
[Escherichia coli]
Length = 388
Score = 144 bits (360), Expect = 1e-33
Identities = 98/329 (29%), Positives = 165/329 (49%), Gaps = 33/329 (10%)
Query: 3 PIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVAL 62
P+A +D E A+ +VL S M G+ V+ +E +F++ G K+A+ V++G+ A + +
Sbjct: 5 PLASSTWDDLEYKAIQSVLDSKMFTMGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMI 64
Query: 63 KAL------KIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKIT 116
AL ++ +GDE+I ++ + + G + F DID T N+D + E +T
Sbjct: 65 AALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVT 124
Query: 117 SKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSF 176
TKAIL V+L G P + +I ++ L+ED ++ GA F K GTFG + FS
Sbjct: 125 DSTKAILTVNLLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNKCAGTFGLMGTFSS 184
Query: 177 YPTKNMTTGEGGMVVTDNDELAERARLIRDHGQA-------------------EKYLHVE 217
+ + ++ T EGG +VTD++E+ IR HG E + V
Sbjct: 185 FYSHHIATMEGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVL 244
Query: 218 LGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRV---KH 274
GYN R ++ AIG QLKKL ++ +R KNAE +++ K P++D + +
Sbjct: 245 PGYNVRPLEMSGAIGIEQLKKLPRFISVRRKNAEYF---LDKFK--DHPYLDVQQETGES 299
Query: 275 VFHQYVIRVEDDYPLSRDELAKELRNRGI 303
+ + ++ D + R +L + L + GI
Sbjct: 300 SWFGFSFIIKKDSGVIRKQLVENLNSAGI 328
>sp|Q07608|MOSB_RHIME MOSB PROTEIN >gi|1073155|pir||C53308 probable hydro-lyase (EC
4.2.1.-) mosB - Rhizobium meliloti (strain L5-30)
>gi|310304|gb|AAA26302.1| (L17071) central region has
homology to regulatory genes [Sinorhizobium meliloti]
Length = 507
Score = 141 bits (353), Expect = 9e-33
Identities = 100/305 (32%), Positives = 161/305 (52%), Gaps = 33/305 (10%)
Query: 32 VEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFTFIASANSILFQG 91
+ AFE+ E++G + ++ ++GT AL VAL AL I GD V+ +T+ A+A + L G
Sbjct: 134 INAFERRMEEWIGGGYVVSASSGTAALTVALIALGIQPGDVVLLPSYTWAATALAPLLIG 193
Query: 92 AKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIED 151
A P F DIDP ++N+ P + IT KAI+VVH++G DM A + + +IED
Sbjct: 194 AIPRFVDIDPNSYNISPTALAAAITPDVKAIIVVHMHGISCDMDEIICHAREQGIAVIED 253
Query: 152 CAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERAR--------- 202
CAQAHGA ++G+ VG DI FS +K+++ G+GG +VT + LA++ R
Sbjct: 254 CAQAHGALYKGQHVGLLSDIGCFSMQKSKHLSAGDGGFMVTRDPTLAQKMRDICNFGLPT 313
Query: 203 ---------LIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDK---WNEIRIKNA 250
++RD G A ++G +R+ ++AA+ QL+ L + W + ++
Sbjct: 314 PKANYRFDEVVRD-GYAVFRECEQIGGMFRLQPMSAALVMHQLEHLRQRIAWLQTAMEPL 372
Query: 251 EILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVE----DDYPLSRDELAKELRN----RG 302
S I K +T VD HV+H+ + ++ D + S E+ + LRN RG
Sbjct: 373 VEESAKIPFFK-ITRSHVDR--THVWHKIRVGIDYAAVDYFGRSMAEIRRGLRNSLAERG 429
Query: 303 IGTAV 307
I + +
Sbjct: 430 ISSTL 434
>gb|AAA91313.1| (U23753) MosB [Sinorhizobium meliloti]
Length = 507
Score = 141 bits (353), Expect = 9e-33
Identities = 100/305 (32%), Positives = 161/305 (52%), Gaps = 33/305 (10%)
Query: 32 VEAFEKEFSEYLGVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFTFIASANSILFQG 91
+ AFE+ E++G + ++ ++GT AL VAL AL I GD V+ +T+ A+A + L G
Sbjct: 134 INAFERRMEEWIGGGYVVSASSGTAALTVALIALGIQPGDVVLLPSYTWAATALAPLLIG 193
Query: 92 AKPVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIED 151
A P F DIDP ++N+ P + IT KAI+VVH++G DM A + + +IED
Sbjct: 194 AIPRFVDIDPNSYNISPTALAAAITPDVKAIIVVHMHGISCDMDEIICHAREQGIAVIED 253
Query: 152 CAQAHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERAR--------- 202
CAQAHGA ++G+ VG DI FS +K+++ G+GG +VT + LA++ R
Sbjct: 254 CAQAHGALYKGQHVGLLSDIGCFSMQKSKHLSAGDGGFMVTRDPTLAQKMRDICNFGLPT 313
Query: 203 ---------LIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDK---WNEIRIKNA 250
++RD G A ++G +R+ ++AA+ QL+ L + W + ++
Sbjct: 314 PKANYRFDEVVRD-GYAVFRECEQIGGMFRLQPMSAALVMHQLEHLRQRIAWLQTAMEPL 372
Query: 251 EILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVE----DDYPLSRDELAKELRN----RG 302
S I K +T VD HV+H+ + ++ D + S E+ + LRN RG
Sbjct: 373 VEESAKIPFFK-ITRSHVDR--THVWHKIRVGIDYAAVDYFGRSMAEIRRGLRNSLAERG 429
Query: 303 IGTAV 307
I + +
Sbjct: 430 ISSTL 434
>pir||S69805 lmbS protein - Streptomyces lincolnensis (fragment)
Length = 371
Score = 134 bits (335), Expect = 1e-30
Identities = 108/351 (30%), Positives = 162/351 (45%), Gaps = 9/351 (2%)
Query: 3 PIAKPIIEDEEINAVVNVLKSGM-LAQGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDVA 61
P A P + E AV+ V++SG ++ G E ++FE+EF+ Y+G +HA A+T+ T A A
Sbjct: 6 PFAAPCFDTAEEEAVLRVVRSGWGVSTGAEAQSFEEEFAAYIGRRHAGALTSCTAARHGA 65
Query: 62 LKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKA 121
L+A IG GDEV F+ + G P P T DP+ V IT +TKA
Sbjct: 66 LRANGIGPGDEVSVPQVPFVPRPPAWSTPGGAPCSRTSVPSTSPFDPDQVKSLITERTKA 125
Query: 122 ILVVHLY-GQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTK 180
+ + R + + H L L A G GD +AFSF+ TK
Sbjct: 126 VRARCTFRPHGRHWNPLRFLCDSHGLTLPRTPRTPLPARDGDAVAGRAGDASAFSFFATK 185
Query: 181 NMTTGEGGMVVTDNDELAERARLIRDHGQAEKYL--HVELGYNYRMTNIAAAIGRAQLKK 238
+TT EGGM+ TD +A+ AR HG + + G+ Y M+++ G AQL K
Sbjct: 186 PITTAEGGMLCTDTARVADEARRWSLHGLSRGAVVNRYRPGHKYNMSDLGRRPGPAQLAK 245
Query: 239 LDKWNEIRIKNAEILSRGIERIKGLTPPFVDPRVKHVFHQYVIRVEDDYPLSRDELAKEL 298
+ + R AE+ R + + L P ++ + +RV RD + L
Sbjct: 246 AGRLHARRTAIAEVYLRELAGLDRLELPRGHRHQPSSWYLFPVRVHGH---RRDAFRQRL 302
Query: 299 RNRGIGTAVHYPVPVHHQP-LYQKLGYPRDICPNAIEASRKVLSLPVHPAV 348
G+GT+VH+ P+H L + P A A+ ++SLPV PA+
Sbjct: 303 HALGVGTSVHFE-PLHRFTWLRDHVVRTGQGFPVADAAADTLVSLPVFPAM 352
>pir||C70713 hypothetical protein Rv1504c - Mycobacterium tuberculosis (strain
H37RV) >gi|1524251|emb|CAB02018.1| (Z79701) hypothetical
protein Rv1504c [Mycobacterium tuberculosis]
Length = 199
Score = 133 bits (331), Expect = 3e-30
Identities = 68/194 (35%), Positives = 109/194 (56%), Gaps = 1/194 (0%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLA-QGKEVEAFEKEFSEYLGVKHAIAVTNGTIALDV 60
+P +P + E+ + G LA G + G + A+ + T AL++
Sbjct: 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
L I +GDEVI +TF+++AN+ + +G PVF DI P T N+D +++ IT +TK
Sbjct: 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
Query: 121 AILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTK 180
AI+ VH G +M A +IA HNL ++ED AQ A + G+ +G+ GD+ A SF+ TK
Sbjct: 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
Query: 181 NMTTGEGGMVVTDN 194
N+ +GEGG ++ ++
Sbjct: 186 NVISGEGGALLVNS 199
>gb|AAF68683.1| (AF216815) unknown [Azospirillum brasilense]
Length = 283
Score = 133 bits (331), Expect = 3e-30
Identities = 88/273 (32%), Positives = 141/273 (51%), Gaps = 12/273 (4%)
Query: 98 DIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHG 157
DID ++P +IT +TKAIL ++ G PA R +A D L LIED +A G
Sbjct: 2 DIDYWQHTINPAKAEAQITPRTKAILAGNVNGHPAHWDELRALATDKGLILIEDSTEAIG 61
Query: 158 AEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQAEKYLHV- 216
+ ++GK VG+FGD A F F + TGEGGM+VTD+ LA + R +R + V
Sbjct: 62 SSYKGKLVGSFGDCAVFDFSEPGVLVTGEGGMIVTDDRNLAHQLRYLRRREMEHRNTVVI 121
Query: 217 --ELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSR---GIERIKGLTPPFVDPR 271
+ + M+N+ AA+G QLK+L EI K E+++ + +G+ PP+ P
Sbjct: 122 TRTIPFQAGMSNLTAALGLVQLKRLP---EILAKRREVVAHYEAAMASFEGIKPPYKGPG 178
Query: 272 VKHVFHQ-YVIRVEDDYPLS-RDELAKELRNRGIGTAVHYPVPVHHQPLYQKLGYPRDIC 329
V Y + + + S R + ++L + A Y ++ Q YQ+ G R C
Sbjct: 179 ADDVHPMVYAVHLGTRFTASGRKAVLEDLSTHDV-EASDYGQALYTQQYYQERGASRADC 237
Query: 330 PNAIEASRKVLSLPVHPAVSREDLDYIIRTLEE 362
P + +VL+LP+H V+ +++ +I+ TL++
Sbjct: 238 PVCQKTVDRVLALPLHHKVTADEVQFIVDTLKD 270
>emb|CAA63162.1| (X92429) Amino-transferase [Streptomyces anulatus]
Length = 429
Score = 132 bits (330), Expect = 5e-30
Identities = 89/278 (32%), Positives = 141/278 (50%), Gaps = 19/278 (6%)
Query: 7 PIIEDEEINAVVNVLKSGMLAQGKE--VEAFEKEFSEYL--GVKHAIAVTNGTIALDVAL 62
P ++ E+ A+ + + +G + E EF +L GV++A+ +GT AL A
Sbjct: 27 PRADEAELAALTEQRNTDISIKGNSGPIGQLEAEFLAFLDHGVRYAVTFNSGTSALLAAY 86
Query: 63 KALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTKAI 122
AL + +G EV T+ A+ + + V DIDP + LDP + IT T+ +
Sbjct: 87 FALGVREGVEVAGPALTYHAALSPVFALRGDVVLVDIDPVSRGLDPKALEAAITENTRVV 146
Query: 123 LVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPTKNM 182
VVH +G P DM A +AE + L ++EDC+ AHG+ ++GK VGTFGD A FS K +
Sbjct: 147 TVVHQWGHPCDMDAILGVAERYGLRVLEDCSHAHGSRYKGKPVGTFGDAAVFSLQANKAV 206
Query: 183 TTGEGGMVVTDNDELAERARLI---RDHGQAEKYLHVEL--------GYNYRMTNIAAAI 231
GEGG++VTD+ + +RA L+ RD + + + EL G RM+ A +
Sbjct: 207 YAGEGGILVTDDALVQDRATLLGHYRDRSR-DSVIDEELRSHWVTGFGLKLRMSPFNAIV 265
Query: 232 GRAQLKKLDKWNEIR---IKNAEILSRGIERIKGLTPP 266
R L E R +++ L R ++ ++ +T P
Sbjct: 266 ARHSLAAFPARKEARHRCLRHFGELLREVDYLEPITVP 303
>pir||S20013 pleiotropic regulatory protein PRG1 - Streptomyces anulatus
(fragment)
Length = 191
Score = 127 bits (317), Expect = 2e-28
Identities = 69/175 (39%), Positives = 100/175 (56%), Gaps = 2/175 (1%)
Query: 36 EKEFSEYL--GVKHAIAVTNGTIALDVALKALKIGQGDEVITTPFTFIASANSILFQGAK 93
E EF +L GV++A+ +GT AL A AL + +G E T+ A+ + +
Sbjct: 8 EAEFLAFLDHGVRYAVTFNSGTSALLAAYFALGVREGVEAAGPALTYHAALSPVFALRGD 67
Query: 94 PVFADIDPKTFNLDPNDVLEKITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIEDCA 153
V DIDP + LDP + IT T+ + VVH +G P DM A +AE + L ++EDC+
Sbjct: 68 VVLVDIDPVSRGLDPKALEAAITENTRVVTVVHQWGHPCDMDAILGVAERYGLRVLEDCS 127
Query: 154 QAHGAEFEGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHG 208
AHG+ ++GK VGTFGD A FS K + GEGG++VTD+ + +RA L+ G
Sbjct: 128 HAHGSRYKGKPVGTFGDAAVFSLQANKAVYAGEGGILVTDDALVQDRATLLATTG 182
>gb|AAA84877.1| (U34305) ORF9; Method: conceptual translation supplied by author
[Shigella sonnei]
Length = 229
Score = 115 bits (286), Expect = 7e-25
Identities = 70/220 (31%), Positives = 121/220 (54%), Gaps = 17/220 (7%)
Query: 160 FEGKKVGTF-GDIAAFSFYPTKNMTTGEGGMVVTDNDELAERARLIRDHGQAEK------ 212
++G K+GT D FSFY K MTTGEGGMVV+ N ++ ER +++R HG +
Sbjct: 9 YKGSKIGTLDSDATVFSFYANKTMTTGEGGMVVSKNKDIIERCKVMRLHGISRDAFDRYQ 68
Query: 213 -------YLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERIKGLTP 265
Y V G+ Y M +I AAIG QL+K+D + + R + A+I ++ + P
Sbjct: 69 SKTPSWFYEVVAPGFKYNMPDICAAIGIHQLRKIDDFQKERQRMAKIYDDALKELPLELP 128
Query: 266 PF-VDPRVKHVFHQYVIRVEDDYPLSRDELAKELRNRGIGTAVHYPVPVHHQPLYQ-KLG 323
+ + H +H Y IR + D ++RD+ K+L + GIG +VH+ +P+H QP+++
Sbjct: 129 EWPTNASDIHAWHLYPIRSKTDSAINRDDFIKKLSDLGIGCSVHF-IPLHKQPVWRDTYN 187
Query: 324 YPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEEL 363
P + E +S+P++ ++ +D ++I+++ +L
Sbjct: 188 LNASNFPVSEECYLNEISIPLYTKMTDQDQLFVIKSIRQL 227
>gb|AAA84876.1| (U34305) ORF8; Method: conceptual translation supplied by author
[Shigella sonnei]
Length = 149
Score = 113 bits (281), Expect = 3e-24
Identities = 59/145 (40%), Positives = 91/145 (62%), Gaps = 1/145 (0%)
Query: 2 IPIAKPIIEDEEINAVVNVLKSGMLAQGKEVEAFEKEFSEYLGVK-HAIAVTNGTIALDV 60
IP A P I +EEI V++ L+SG + G + + FE+EFS YLG ++AV + T L +
Sbjct: 5 IPFALPEIGEEEIAEVIDSLRSGWITTGPKAKQFEQEFSNYLGANVQSLAVNSATSGLHL 64
Query: 61 ALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLEKITSKTK 120
AL+A+ + GD+VI +TF A+A + + GA PV D+D KTFN+ + + + IT++TK
Sbjct: 65 ALEAVALKPGDQVIVPSYTFTATAEIVRYLGADPVIVDVDRKTFNISVDAIEKAITNETK 124
Query: 121 AILVVHLYGQPADMKAFREIAEDHN 145
AI+ VH G DM + IA+ ++
Sbjct: 125 AIIPVHFAGLACDMDSILSIAKKYD 149
>emb|CAB65209.1| (AJ007311) hypothetical protein [Legionella pneumophila]
Length = 280
Score = 113 bits (279), Expect = 4e-24
Identities = 78/257 (30%), Positives = 132/257 (51%), Gaps = 22/257 (8%)
Query: 120 KAILVVHLYGQPADMKAFREIAEDHNLYLIEDCAQAHGAEFEGKKVGTFGDIAAFSFYPT 179
KA+++V+LYGQ A+ A ++ ++N+ +IED A++ GA + K GTFG + FSF
Sbjct: 21 KAVIIVNLYGQSANYDALCQLCNEYNVPIIEDAAESLGATYNNKYSGTFGKLGVFSFNGN 80
Query: 180 KNMTTGEGGMVVTDNDELAERARLIRDHGQ--AEKYLHVELGYNYRMTNIAAAIGRAQLK 237
K +TT GGM+V++++ L +RAR + + Y H +GYNYRM+N+ A IGR QLK
Sbjct: 81 KIITTSGGGMLVSEDESLIQRARFLSTQAREPMPHYEHTVVGYNYRMSNVLAGIGRGQLK 140
Query: 238 KLDKWNEIRIKNAEILSRGIERIKGLTPPFVD--PRVKHVFH----QYVIRVEDDYPLSR 291
L+K + R E + +E + PF+D P + + ++ +
Sbjct: 141 VLEKRVKARRAIFERYKQALE-----SYPFIDMMPEITQGYSTRWLSTLVIKPTPNKIKP 195
Query: 292 DELAKELRNRGIGTAVHYPVPVHHQPLYQ-KLGYPRDICPNAIEASRKV----LSLPVHP 346
+E+ ++L+ I + P+H QPL+ YP D S + + LP
Sbjct: 196 EEVIEQLKPFNIEARRTWK-PMHRQPLFAGSKYYPHD---EQFSVSDYLFDHGICLPSGS 251
Query: 347 AVSREDLDYIIRTLEEL 363
++ D+D +I L ++
Sbjct: 252 NLTPRDIDRVIHCLNDI 268
>sp|Q50723|YY02_MYCTU HYPOTHETICAL 44.9 KDA PROTEIN RV3402C >gi|7477606|pir||G70735
hypothetical protein Rv3402c - Mycobacterium
tuberculosis (strain H37RV) >gi|1449385|emb|CAB01021.1|
(Z77165) hypothetical protein Rv3402c [Mycobacterium
tuberculosis]
Length = 412
Score = 109 bits (270), Expect = 5e-23
Identities = 97/350 (27%), Positives = 159/350 (44%), Gaps = 27/350 (7%)
Query: 29 GKEVEAFEKEFSEYLGVK-HAIAVTNGTIALDVALK-ALKIGQGDEVITTP-FTFIASAN 85
G F + +YLG H + NGT+AL AL + G D + P FTF+ A
Sbjct: 68 GPNERRFARALRDYLGPHLHVATLANGTLALLAALHVSFGAGTRDRYLLMPSFTFVGVAQ 127
Query: 86 SILFQGAKPVFADIDPKTFNL---DPNDVLEKITSKTKAILVVHLYGQP-ADMKAFREIA 141
+ L+ G +P F DID T+ V+E+ + IL+ +++G + + E+A
Sbjct: 128 AALWTGYRPWFIDIDANTWQPCVHSARAVIERFRDRIAGILLANVFGVGNPQISVWEELA 187
Query: 142 EDHNLYLIEDCAQAHGAEF-EGKKVGTFGDIAAFSFYPTKNMTTGEGGMVVTDNDELAER 200
+ L ++ D A G+ + +G+++G G FSF+ TK GEGG +V+ + L E
Sbjct: 188 AEWELPIVLDSAAGFGSTYADGERLGGRGACEIFSFHATKPFAVGEGGALVSRDPRLVEH 247
Query: 201 ARLIRDHGQAEKYLHVELGYNYRMTNIAAAIGRAQLKKLDKWNEIRIKNAEILSRGIERI 260
A ++ G + ++LG N +++ I+AAIG QL LD+ R K E G+
Sbjct: 248 AYKFQNFGLVQTRESIQLGMNGKLSEISAAIGLRQLVGLDRRLASRRKVLECYRTGM--- 304
Query: 261 KGLTPPFVDPRVKHVFHQYVIRV--EDDYPLSRDELAK---ELRNRGIGTAVHYPVPVHH 315
D V+ + V + S D A LR I +Y P H
Sbjct: 305 -------ADAGVRFQDNANVASLCFASACCTSADHKAAVLGSLRRHAIEARDYYNPPQHR 357
Query: 316 QPLY---QKLGYPRDICPNAIEASRKVLSLPVHPAVSREDLDYIIRTLEE 362
P + +L D+ A SR ++SLPVH ++ +D+ ++ ++E
Sbjct: 358 HPYFVTNAELVESTDLAVTADICSR-IVSLPVHDHMAPDDVARVVAAVQE 406
>pir||T35679 hypothetical protein SC7C7.01 SC7C7.01 - Streptomyces coelicolor
>gi|3294234|emb|CAA19847.1| (AL031031) hypothetical
protein SC7C7.01 [Streptomyces coelicolor A3(2)]
Length = 225
Score = 81.1 bits (197), Expect = 2e-14
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 54 GTIALDVALKALKIGQGDEVITTPFTFIASANSILFQGAKPVFADIDPKTFNLDPNDVLE 113
GT A+ L+A +G GDEV+ F + A ++ GA PVFADIDP T+ LD + V
Sbjct: 2 GTAAM---LRAAGVGVGDEVVVPAFGNVEVAEAVALAGALPVFADIDPDTYCLDASLVEA 58
Query: 114 KITSKTKAILVVHLYGQPADMKAFREIAEDHNLYLIE 150
+T +T A++VVH +G+PADM + I E H L ++E
Sbjct: 59 ALTPRTAAVVVVHRFGRPADMGSLHRIGERHGLLVLE 95
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.138 0.396
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137614224
Number of Sequences: 2977
Number of extensions: 5907530
Number of successful extensions: 15052
Number of sequences better than 1.0e-10: 122
Number of HSP's better than 0.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 14630
Number of HSP's gapped (non-prelim): 125
length of query: 366
length of database: 189,106,746
effective HSP length: 57
effective length of query: 309
effective length of database: 154,992,987
effective search space: 47892832983
effective search space used: 47892832983
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 166 (69.1 bits)