BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0780 (PAB0780) DE:Hypothetical protein
(473 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75097 hypothetical protein PAB0780 - Pyrococcus abyssi (st... 1000 0.0
pir||C72591 hypothetical protein APE1199 - Aeropyrum pernix (str... 429 e-119
gb|AAD32734.1| (AF127374) MmcK [Streptomyces lavendulae] 393 e-108
pir||B72589 hypothetical protein APE1182 - Aeropyrum pernix (str... 134 2e-30
gb|AAD32724.1| (AF127374) MmcA [Streptomyces lavendulae] 134 2e-30
gb|AAG18857.1| (AE004989) Vng0264h [Halobacterium sp. NRC-1] 130 3e-29
gb|AAD32726.1| (AF127374) MmcC [Streptomyces lavendulae] 110 4e-23
gb|AAD32740.1| (AF127374) MmcP [Streptomyces lavendulae] 85 2e-15
>pir||E75097 hypothetical protein PAB0780 - Pyrococcus abyssi (strain Orsay)
>gi|5458594|emb|CAB50082.1| (AJ248286) hypothetical
protein [Pyrococcus abyssi]
Length = 473
Score = 1000 bits (2556), Expect = 0.0
Identities = 473/473 (100%), Positives = 473/473 (100%)
Query: 1 MVLRMLEELNVRKVFVIGLDSAPPELLFNRFINDLPHIKKLLKKSVYGPMKTGIPAITIP 60
MVLRMLEELNVRKVFVIGLDSAPPELLFNRFINDLPHIKKLLKKSVYGPMKTGIPAITIP
Sbjct: 1 MVLRMLEELNVRKVFVIGLDSAPPELLFNRFINDLPHIKKLLKKSVYGPMKTGIPAITIP 60
Query: 61 MWMVMVTSKTPGELGLYGFRHRKGNSYTEYWIAHSKKVKEPTIWDYLGQKGKKSIIVGVP 120
MWMVMVTSKTPGELGLYGFRHRKGNSYTEYWIAHSKKVKEPTIWDYLGQKGKKSIIVGVP
Sbjct: 61 MWMVMVTSKTPGELGLYGFRHRKGNSYTEYWIAHSKKVKEPTIWDYLGQKGKKSIIVGVP 120
Query: 121 PTYPPKPIKGYLVSCFITPDASVDYTYPRELKGEIERLVGEYIFDVPFRKEAKDEVKEGL 180
PTYPPKPIKGYLVSCFITPDASVDYTYPRELKGEIERLVGEYIFDVPFRKEAKDEVKEGL
Sbjct: 121 PTYPPKPIKGYLVSCFITPDASVDYTYPRELKGEIERLVGEYIFDVPFRKEAKDEVKEGL 180
Query: 181 WEMTEKRFEVIRYLLQEKEWDYFHFVEIGLDRVHHAFWRYFDENHHLYPGKGNKYENVIP 240
WEMTEKRFEVIRYLLQEKEWDYFHFVEIGLDRVHHAFWRYFDENHHLYPGKGNKYENVIP
Sbjct: 181 WEMTEKRFEVIRYLLQEKEWDYFHFVEIGLDRVHHAFWRYFDENHHLYPGKGNKYENVIP 240
Query: 241 DYYKLLDKEIGKTLKLIDLEETAVFIVSDHGIKAMHGNFAVNQWLAEEGLLKVKDPKVLH 300
DYYKLLDKEIGKTLKLIDLEETAVFIVSDHGIKAMHGNFAVNQWLAEEGLLKVKDPKVLH
Sbjct: 241 DYYKLLDKEIGKTLKLIDLEETAVFIVSDHGIKAMHGNFAVNQWLAEEGLLKVKDPKVLH 300
Query: 301 DGKVKRLEHVEVEWSDTIAWGWGGYYSRIFLNVKGREREGKIPFSKFDSVRDEVAEMIKS 360
DGKVKRLEHVEVEWSDTIAWGWGGYYSRIFLNVKGREREGKIPFSKFDSVRDEVAEMIKS
Sbjct: 301 DGKVKRLEHVEVEWSDTIAWGWGGYYSRIFLNVKGREREGKIPFSKFDSVRDEVAEMIKS 360
Query: 361 IRGPNGEKWNTRVFYPEEIYPVARGSKPDLMVYFDDLNWRAAGTIGHPTNYLPENDTGPD 420
IRGPNGEKWNTRVFYPEEIYPVARGSKPDLMVYFDDLNWRAAGTIGHPTNYLPENDTGPD
Sbjct: 361 IRGPNGEKWNTRVFYPEEIYPVARGSKPDLMVYFDDLNWRAAGTIGHPTNYLPENDTGPD 420
Query: 421 DANHSEYGVFSMYLPGFEDSKAIQLSIYDFAPTVLTLFGIREPLREMHGKSIL 473
DANHSEYGVFSMYLPGFEDSKAIQLSIYDFAPTVLTLFGIREPLREMHGKSIL
Sbjct: 421 DANHSEYGVFSMYLPGFEDSKAIQLSIYDFAPTVLTLFGIREPLREMHGKSIL 473
>pir||C72591 hypothetical protein APE1199 - Aeropyrum pernix (strain K1)
>gi|5104871|dbj|BAA80185.1| (AP000061) 458aa long
hypothetical protein [Aeropyrum pernix]
Length = 458
Score = 429 bits (1092), Expect = e-119
Identities = 199/421 (47%), Positives = 287/421 (67%), Gaps = 9/421 (2%)
Query: 11 VRKVFVIGLDSAPPELLFNRFINDLPHIKKLLKKSVYGPMKTGIPAITIPMWMVMVTSKT 70
+RK+ VIGLDS PP LL +F + +P+++ LL +V G + +G P IT+PMW VM+ ++
Sbjct: 1 MRKLLVIGLDSVPP-LLIEKFRDLIPNLQSLL--NVKGKLLSGHPPITVPMWGVMLAGRS 57
Query: 71 PGELGLYGFRHRKGNSYTEYWIAHSKKVKEPTIWDYLGQK-GKKSIIVGVPPTYPPKPIK 129
GELG+YGFRHR+ ++ S+ + E +WD LG + G +S+++GVPP YP + ++
Sbjct: 58 AGELGVYGFRHRRPGDVGTSYVVTSRSIAEGWVWDDLGLRLGLRSLVIGVPPGYPARRVR 117
Query: 130 GYLVSCFITPDASVDYTYPRELKGEIERLVG-EYIFDVPFRKEAKDEVKEGLWEMTEKRF 188
G+ VSCF+TP + +P LK EI + G +Y+FDV +R E K+ V++ LW + + +F
Sbjct: 118 GWFVSCFLTPGVDGAFAWPPGLKREILKASGGDYVFDVKYRVEDKESVRKSLWRLAKTQF 177
Query: 189 EVIRYLLQEKEWDYFHFVEIGLDRVHHAFWRYFDENHHLYPGKGNKYENVIPDYYKLLDK 248
+V++YLL K WD+ ++ IG DRVHHAFW+Y+D H YPG+GN YENV+P+YY L+DK
Sbjct: 178 KVVKYLLSSKPWDFAMYMHIGTDRVHHAFWKYWDPEHPRYPGEGNPYENVLPEYYSLVDK 237
Query: 249 EIGKTLKLIDLEETAVFIVSDHGIKAMHGNFAVNQWLAEEGLLKVKDPKVLHDGKVKRLE 308
IG+ L+ + +T V +VSDHG KAM G FA+NQWL EEG L +K+ LE
Sbjct: 238 HIGQLLESLP-GDTDVIVVSDHGAKAMKGAFAINQWLEEEGYLSLKEEPKRPGAD---LE 293
Query: 309 HVEVEWSDTIAWGWGGYYSRIFLNVKGREREGKIPFSKFDSVRDEVAEMIKSIRGPNGEK 368
++W T+AW WGGYYSR+++N+KGRE G + ++ SV +++ I+ IRGPNGE+
Sbjct: 294 ASMIDWDRTMAWAWGGYYSRVYINLKGREPRGIVGREEYWSVVEQLKRDIEKIRGPNGER 353
Query: 369 WNTRVFYPEEIYPVARGSKPDLMVYFDDLNWRAAGTIGHPTNYLPENDTGPDDANHSEYG 428
W + ++P E+YP RG PDLMVY D+L+WR AGTIG P+ YL END GPDDA H +G
Sbjct: 354 WENKAYHPSELYPEVRGDAPDLMVYLDNLSWRPAGTIGWPSTYLEENDRGPDDAVHDWHG 413
Query: 429 V 429
+
Sbjct: 414 I 414
>gb|AAD32734.1| (AF127374) MmcK [Streptomyces lavendulae]
Length = 460
Score = 393 bits (1000), Expect = e-108
Identities = 193/450 (42%), Positives = 275/450 (60%), Gaps = 8/450 (1%)
Query: 13 KVFVIGLDSAPPELLFNRFINDLPHIKKLLKKSVYGPMKTGIPAITIPMWMVMVTSKTPG 72
KV VIGLDSA P+ +F+RF D+P L +KS++GPM++ P IT+P W M++ ++PG
Sbjct: 6 KVAVIGLDSATPQYMFDRFAEDMPVFTALRRKSLWGPMRSIDPPITMPAWSCMMSGRSPG 65
Query: 73 ELGLYGFRHRKGNSYTEYWIAHSKKVKEPTIWDYLGQKGKKSIIVGVPPTYPPKPIKGYL 132
ELG+YGFR R Y A S ++ P IWD + G+ S+++GVP TYPP PI+G +
Sbjct: 66 ELGVYGFRDRGAYDYGPLKFATSHSIQAPRIWDEMTAAGRSSVVLGVPGTYPPAPIRGAM 125
Query: 133 VSCFITPDASVDYTYPRELKGEIERLVGEYIFDV-PFRKEAKDEVKEGLWEMTEKRFEVI 191
VSCF+ P YT P L E+E+L G Y DV FR + V + +++M+E+RFEV
Sbjct: 126 VSCFLAPSTQSRYTSPPGLADELEKLTGGYALDVEDFRSTDLERVSQRVFDMSEQRFEVA 185
Query: 192 RYLLQEKEWDYFHFVEIGLDRVHHAFWRYFDENHHLYPGKGNKYENVIPDYYKLLDKEIG 251
R+L +EWD+ FV++G DR+HH FW+Y D +H + GN Y + DYY+ LD+ +G
Sbjct: 186 RHLATTQEWDFLSFVDMGPDRLHHGFWKYCDPDHPRHE-PGNAYAGLFRDYYRALDRHLG 244
Query: 252 KTLKLIDLEETAVFIVSDHGIKAMHGNFAVNQWLAEEGLLKVKDPKVLHDGKVKRLEHVE 311
+ L+ + E T V +VSDHG + M G VN+WL +EG L + + +
Sbjct: 245 RFLESLP-ENTTVLVVSDHGAQPMVGGLFVNEWLRKEGYLVLTE----EPAGPTPVAQAA 299
Query: 312 VEWSDTIAWGWGGYYSRIFLNVKGREREGKIPFSKFDSVRDEVAEMIKSIRGPNGEKWNT 371
V+W T AW GGYY RIFLNV+GRE +G IP ++++S RD +A ++++ G+ T
Sbjct: 300 VDWKRTTAWAEGGYYGRIFLNVEGREPQGTIPAAEYESTRDLIASALEALPDDQGQPMGT 359
Query: 372 RVFYPEEIYPVARGSKPDLMVYFDDLNWRAAGTIGHPTN-YLPENDTGPDDANHSEYGVF 430
R P E+Y G PDL+VY +L WRA T+G Y ENDTGPD ANH + G+F
Sbjct: 360 RALRPGELYGEVNGIAPDLLVYVGNLRWRALATLGMGKGLYTTENDTGPDHANHGDTGIF 419
Query: 431 SMYLPGFEDSKAIQLSIYDFAPTVLTLFGI 460
++ PG +A LS+YD APT+ L G+
Sbjct: 420 ALSAPGITPGRADGLSLYDVAPTLRELLGL 449
>pir||B72589 hypothetical protein APE1182 - Aeropyrum pernix (strain K1)
>gi|5104854|dbj|BAA80168.1| (AP000061) 522aa long
hypothetical protein [Aeropyrum pernix]
Length = 522
Score = 134 bits (335), Expect = 2e-30
Identities = 130/491 (26%), Positives = 209/491 (42%), Gaps = 66/491 (13%)
Query: 13 KVFVIGLDSAPPELLFNRFINDLPH-IKKLLKKSVYGPMKTGIPAITIPMWMVMVTSKTP 71
K ++GLD +L + H + KL+K+ +G +++ IP IT W + T P
Sbjct: 2 KTVLLGLDGCTWSILRPLAEKGVMHNLAKLMKQCSWGILRSTIPPITGAAWPSLATGLNP 61
Query: 72 GELGLYGFRHRKGNSYTEYWIAHSKKVKEPTIWDYLGQKGKKSIIVGVPPTYPPKPIKGY 131
G+ G+ F RKG Y Y A S + WD L + K+ + P TYPP PIKG
Sbjct: 62 GKTGIVDFLGRKGQEYRLY-PADSSWYRGYAFWDLLSVENKRIAVFFYPLTYPPYPIKGV 120
Query: 132 LVSCFITPDASVDYTYPRELKGEIERLVGEYIFDVPFRKEAKDEVKEGLWEMTEKRFEVI 191
LVS TP +YP+E+ EI ++ V + E ++V + ++ + E+
Sbjct: 121 LVSGIGTPSLKPK-SYPQEVTDEILSSFPDFRVYVDYHDEKYNDVDLFISDVM-RHLEIT 178
Query: 192 RYLLQEKE------WDYFHFVEIGLDRVHHAFWRYFDENHHLYPGKGNK-YENVIPDYYK 244
+ +++ +D F+ D + H W D H LY + +K Y I D +
Sbjct: 179 KRMVKSYVLGKYGLYDNITFIVSATDWIQHRLWHLMDPKHPLYHEEQSKRYSKKIDDLWS 238
Query: 245 LLDKEIGKTLKLIDLEETAVFIVSDHGIKAMHGNFAVNQWLAEEGLLKVK---------- 294
L+D+ +G + E+ + IVSDHG + G F + +WL +G +K++
Sbjct: 239 LVDETVGFFAEYAHSEKAYLMIVSDHGFGSNLGVFNLARWLVTKGYMKLRRGGSWKASIL 298
Query: 295 ------DPKVLHDGKVKRL------EHVE---------VEWSDTIAWGWGGYYSRIFLNV 333
K+ D KR+ E+V+ S IA G + I++ +
Sbjct: 299 SYGIRIAKKLRADDLAKRVLRGRVREYVQSLGLTGLINFTESKAIALGHSITFGGIYV-L 357
Query: 334 KGREREGKIPFSKFDSVRDEVAEMIKSIRGPNGEKWNTRVFYPEEIYPVARGSK----PD 389
K +ERE I DE+ +K I V+ E++Y G K PD
Sbjct: 358 KSKEREKLI---------DELTGELKKIPEEFKIDVGVNVYRREDLY---SGDKLKLLPD 405
Query: 390 LMVYFDDLNWRAAGTIGHPTNYL---PENDTGPDDANHSEYGVFSMYLPGFEDSKAIQLS 446
L++ DD ++ + P L TG H G+F + P + + +S
Sbjct: 406 LIIGIDDWSFSITEDLHSPLLELRPWSPRHTGA----HRPNGIFLLCGPSVKRHAGLSVS 461
Query: 447 IYDFAPTVLTL 457
IYD APT+L L
Sbjct: 462 IYDVAPTILYL 472
>gb|AAD32724.1| (AF127374) MmcA [Streptomyces lavendulae]
Length = 514
Score = 134 bits (334), Expect = 2e-30
Identities = 113/446 (25%), Positives = 193/446 (42%), Gaps = 20/446 (4%)
Query: 35 LPHIKKLLKKSVYGPMKTGIPAITIPMWMVMVTSKTPGELGLYGFRHRKGNSYTEYWIAH 94
LPH+ KLL++S PA T P W V++ PG G+Y F + +Y +
Sbjct: 29 LPHMAKLLRESASAATDCTWPAHTAPGWSTFVSASDPGGHGIYQFYDTQDPAYGAR-VTR 87
Query: 95 SKKVKEPTIWDYLGQKGKKSIIVGVPPTYPPKPIKGYLVSCFITPDASVDYTYPRELKGE 154
S + WD+L + ++ +P ++PP + GY V+ + + ++ + P L E
Sbjct: 88 SGDLGRSCAWDWLAAQEYSLGLINIPMSHPPADLPGYQVTWPL--ERTLKHCRPDSLLRE 145
Query: 155 IERLVGEYIFDVPFRKEAKDEVKEGLWEMTEKRFEVIRYLLQEKEWDYFHFVEIGLDRVH 214
+ + D+ E R +R+L+ + D V DRV
Sbjct: 146 LAAAKAHFQSDLATMFRGDMAYLEEAERNVAARVRSVRHLMSTRPTDVVMVVLTEADRVG 205
Query: 215 HAFWRYFDENH--HLYPGKGNKYENVIPDYYKLLDKEIGKTLKLIDLEETAVFIVSDHGI 272
H +W Y D H H +G+ ++ +P Y+ +D +G+ L+L+D E+T+V +VSDHG+
Sbjct: 206 HHYWHYGDPGHPGHRPAPEGSGWDVAMPRIYQAIDHAVGELLELVD-EDTSVVLVSDHGL 264
Query: 273 KAMHGNFAVNQWLAEEGLLKVKDPKVLHDGKVKRL----EHVEVEWSDTIAWGWGGYYSR 328
+V+ L E GLL + D HV+ + G Y
Sbjct: 265 GTGRHGLSVHTLLEEAGLLATAPGEEPQDAAASWFAGNGRHVDFRRTSVYMPVPGSY--G 322
Query: 329 IFLNVKGREREGKIPFSKFDSVRDEVAEMIKSIRGPNGEKWNTRVFYPEEIYPVAR-GSK 387
+ +NV+GR++ G + + V DEV ++ + GP G++ V EE YP G
Sbjct: 323 LNINVRGRQQRGTVAPRDRERVMDEVTGLLSGLTGPEGQQVFRAVRPREEAYPGPHTGRA 382
Query: 388 PDLMVYFDDLNWRAAGTIGHPTNYLPENDTGPDDANHSEYGVFSMYLPGFEDSKAI-QLS 446
PDL++ D +G + P TG H G+++ P + ++
Sbjct: 383 PDLLLVPRDETVLPVPDLGGDV-WRPSAQTG----LHRYRGLWAHRSPRVRPGRLPGTVA 437
Query: 447 IYDFAPTVLTLFGIREPLREMHGKSI 472
+ D PT+LT G P ++HG+ +
Sbjct: 438 LTDTLPTLLTDLGAAWP-SDIHGRPV 462
>gb|AAG18857.1| (AE004989) Vng0264h [Halobacterium sp. NRC-1]
Length = 452
Score = 130 bits (324), Expect = 3e-29
Identities = 105/464 (22%), Positives = 204/464 (43%), Gaps = 32/464 (6%)
Query: 13 KVFVIGLDSAPPELLFNRFINDLPHIKKLLKKSVYGPMKTGIPAITIPMWMVMVTSKTPG 72
+V +G+D P L+ + + P++ + G +++ +P + W + T PG
Sbjct: 14 RVAFVGIDGVPFSLIRDH-PDTFPNLHDAMAAGSGGAIESIVPPESSACWPSLTTGVNPG 72
Query: 73 ELGLYGFRHRKGNSYTEYWIAHSKKVKEPTIWDYLGQKGKKSIIVGVPPTYPPKPIKGYL 132
E G+YGF+ R+ SY E ++ + V+ +WD + G+ + ++ VP T+PP+ +
Sbjct: 73 ETGVYGFQDRETGSY-ETYVPMGQDVQATRVWDRVTDAGRDATVMNVPVTFPPQRNVQRM 131
Query: 133 VSCFITPDASVDYTYPRELKGEIERLVGEYIFDVPFRKEAKDEVK---EGLWEMTEKRFE 189
S F++PD +P E +E +Y DV + D+ E E + R E
Sbjct: 132 SSGFLSPDIE-KAAHPPEFADALE--ATDYRIDVNAKLGHDDDKAAFIEDAHETIDARQE 188
Query: 190 VIRYLLQEKEWDYFHFVEIGLDRVHHAFWRYFDENHHLYPGKGNKYENVIPDYYKLLDKE 249
+ +WD F V + DRV+H ++ ++E+ E ++Y+ +D+
Sbjct: 189 AFLEYIDADDWDLFFGVFMSTDRVNHFLFKDYEEH--------GDNEAAFFEFYEKVDRY 240
Query: 250 IGKTLKLIDLEETAVFIVSDHGIKAMHGNFAVNQWLAEEGLLKVKDPKVLHDGKVKRLEH 309
IG+ ++ ++ + + SDHG + +N WLA++G L P G +
Sbjct: 241 IGE-IRAAIADDVTLVVASDHGFTSEDYEVHLNSWLADQGWLSFDSPDPEGLGDIS---- 295
Query: 310 VEVEWSDTIAWGWGGYYSRIFLNVKGREREGKIPFSKFDSVRDEVAEMIKSIRGPNGEKW 369
DT + + R +LN +GRE G + D+V EV++ + ++ P+G +
Sbjct: 296 -----DDTQVYSF--IPGRFYLNREGREPRGSVAADDADAVLAEVSDALTALESPDGRQV 348
Query: 370 NTRVFYPEEIYPVARGSKPDLMVYFDDLNWRAAGTIGHPTNYLPENDTGPDDANHSEYGV 429
RV + ++ + +V + + P + GP + HS +
Sbjct: 349 VDRVVEGDAVFDGDHDAIAPDLVAIPNHGFDLKAGFSTPGDVFRH---GPRNGMHS-FEN 404
Query: 430 FSMYLPGFEDSKAIQLSIYDFAPTVLTLFGIREPLREMHGKSIL 473
++ + S ++YD APT+L L ++ RE G +++
Sbjct: 405 ATLVTDAPDVSIPSSTNLYDIAPTLLDLMDVQYDSREFDGDTLV 448
>gb|AAD32726.1| (AF127374) MmcC [Streptomyces lavendulae]
Length = 470
Score = 110 bits (272), Expect = 4e-23
Identities = 124/466 (26%), Positives = 186/466 (39%), Gaps = 47/466 (10%)
Query: 12 RKVFVIGLDSAPPELLFNRFIND--LPHIKKLLKKSVYGPMKTGIPAITIPMWMVMVTSK 69
R VIGLD P LL R D +PH LL + + +P I+ W +T
Sbjct: 3 RHALVIGLDGMPRTLL-TRLAGDGTMPHTAALLAEGHCAELLAPVPEISSTSWATFLTGT 61
Query: 70 TPGELGLYGFRHRKGNSYTEYWIAHSKKVKEPTIWDYLGQKGKKSIIVGVPPTYPPKPIK 129
PG G+YGF ++++EP +W+ + G++++ + VP TYP I
Sbjct: 62 NPGRHGIYGFTDLAPGDGYRITFPGVRQLREPPLWELAARAGRRTVCLNVPGTYPAPAID 121
Query: 130 GYLVSCFITPDASVDYTYPRELKGEIERLVG-EYIFDVPFRKEAKDEVK--EGLWEMTEK 186
G LVS F+ P+ + PR L L G +Y DV A D
Sbjct: 122 GVLVSGFVAPELERAVSPPRLL----PLLRGLDYELDVEVGDVAADPAAFLGRAVRALRA 177
Query: 187 RFEVIRYLLQEKEWDYFHFVEIGLDRVHHAFWRYFDENHHLYPGKGNKYENVIPDYYKLL 246
R + +LL+++ WD V DRVHH WR + + + +Y+L+
Sbjct: 178 RTRAMEHLLRQETWDLAVAVLTETDRVHHFLWRAVAD-------PADPLHGDVLAFYRLV 230
Query: 247 DKEIGKTLKLIDLEETAVFIVSDHGIKAMHGNFAVNQWLAEEGLLKVKDPKVLHDGKVKR 306
D + + + +F++SDHG +N WL E G L D V D
Sbjct: 231 DDCVATLVSTLP-PGGELFLMSDHGFGPAACQVYLNAWLRESGWLAGLD--VCPD----- 282
Query: 307 LEHVEVEWSDTIAWGWGGYYSRIFLNVKGREREGKIPFSKFDSVRDEVAEMIKSIR---- 362
+ D + + +RI LN K R G + ++ D E+A + ++R
Sbjct: 283 -----LTAVDARSTAFALDPARIHLNRKSRFPGGGLTDAEADEAAHEIARELSALRCDGT 337
Query: 363 --GP--NGEKWNTRVFYPEEIY--PVARGSKPDLMVYFDDLNWRAAGTIGHPT--NYLPE 414
GP +G ++ +EIY P+ G+ PDL+ G G T N +
Sbjct: 338 RLGPDVDGPLLVRDLYRAQEIYHGPLL-GNAPDLVAVPAPGVQLRGGWGGTHTVRNDILT 396
Query: 415 NDTGPDDANHSEYGVFSMYLPGFEDSKAIQLSIYDFAPTVLTLFGI 460
DDA G PG +D L + D APTVL GI
Sbjct: 397 GTHTRDDAVFYRRGA-PAPAPGADDG---PLDMTDVAPTVLASLGI 438
>gb|AAD32740.1| (AF127374) MmcP [Streptomyces lavendulae]
Length = 443
Score = 84.7 bits (206), Expect = 2e-15
Identities = 101/430 (23%), Positives = 179/430 (41%), Gaps = 68/430 (15%)
Query: 12 RKVFVIGLDSAPPELLFNRFIND--LPHIKKLLKKSVYGPMKT-GIPAITIPMWMVMVTS 68
++V V+ + A PELL +R+ LP L + GP+ G P
Sbjct: 5 QRVVVVITEGAAPELL-DRWCAQGLLPGFAALRSQGASGPLHAEGTPY------------ 51
Query: 69 KTPGELGLYGFRHRKGNSYTEYWIAHSKKV----------KEPTIWDYLGQKGKKSIIVG 118
+ PG L + R + + YW H + + P +W + +G + +G
Sbjct: 52 EPPGLLSVLTGRRAADHGFYSYWTCHDPEYAPQVLTPEHRRHPLLWQHEVFQGVRFASIG 111
Query: 119 VPPTYPPKPIKGYLVSCFITPDASVDYTYPRELKGEIERLVGEYIFDVP--FRKEAKDEV 176
+ T+PP+P G L++ A++ +PR L+ + + + DV + + +DE+
Sbjct: 112 LFGTHPPEPFDGSLIT--YPMYATLHACHPRSLQRTLAKKGIRPVHDVSIFWTGQDRDEL 169
Query: 177 KEGLWEMTEKRFEVIRYLLQEKEWDYFHFVEIGLDRVHHAFWRYFDENHHLYPGKGNKYE 236
L E +R LL+E + + I DR H +W+ L G ++ E
Sbjct: 170 LPSLLEADVQRGRAALALLEESDVVIVNLTSI--DRCSHIYWQ------ELEHGPEHERE 221
Query: 237 NVIPDYYKLLDKEIGKTLKLIDLEETAVFIVSDHGIKAMHGNFAVNQWLAEEGLLKVKDP 296
+ + Y+ D+ I L+ D + T+V S+ G + ++N + + G L +
Sbjct: 222 SAVFAAYRTCDQVIQDALRAAD-DRTSVVAFSEIGFGPLRNYCSINDEMEQAGFLATAE- 279
Query: 297 KVLHDGKVKRLEHVEVEWSDTIAWGWGGYYSRIFLNVKGREREGKIPFSKFDSVRDEVAE 356
DG+ VEW+ + A+ + +N++ R + G +P ++ VR +VA
Sbjct: 280 ----DGR--------VEWAGSAAFEAVQGTHGVNINLRDRYKHGLVPERDYEKVRTDVAA 327
Query: 357 MIKSIRGP-NGEKWNTRVFYPEEIYP-VARGSKPDLMVYFDDLNWRAAGTIGHPTNYLPE 414
+ R P G + V EE+YP A PDL++ + +WR YLP
Sbjct: 328 ALLERRNPRTGRLFFDAVRRREEVYPGEATQHAPDLIL--EPADWR----------YLPL 375
Query: 415 NDTGPDDANH 424
D P A+H
Sbjct: 376 GD--PHWASH 383
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.142 0.442
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 206859752
Number of Sequences: 2977
Number of extensions: 9858610
Number of successful extensions: 19563
Number of sequences better than 1.0e-10: 8
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 19532
Number of HSP's gapped (non-prelim): 10
length of query: 473
length of database: 189,106,746
effective HSP length: 52
effective length of query: 421
effective length of database: 157,985,422
effective search space: 66511862662
effective search space used: 66511862662
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 167 (69.5 bits)