BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0800 (PAB0800) DE:HYPOTHETICAL ATP-BINDING PROTEIN
(326 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9UZE8|Y800_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB0800 >g... 651 0.0
sp|Q9V050|Y634_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB0634 >g... 329 3e-89
sp|Q9V103|YJ45_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB1945 >g... 308 7e-83
sp|Q59053|YG59_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1659 >gi... 284 1e-75
sp|O58276|Y541_PYRHO HYPOTHETICAL ATP-BINDING PROTEIN PH0541 >gi... 258 7e-68
sp|Q57881|Y439_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0439 >gi... 229 3e-59
sp|Q60380|Y074_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0074 >gi... 219 4e-56
sp|Q58049|Y632_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0632 >gi... 217 2e-55
sp|Q57611|Y147_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0147 >gi... 205 6e-52
sp|Q60388|Y075_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0075 >gi... 199 3e-50
sp|Q58416|YA10_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1010 >gi... 198 6e-50
sp|Q58697|YD01_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1301 >gi... 197 1e-49
sp|Q58211|Y801_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0801 >gi... 182 5e-45
gi|10954506 M. jannaschii predicted coding region MJECL15 [Metha... 180 3e-44
sp|Q59004|YG09_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1609 >gi... 169 5e-41
gi|10954505 M. jannaschii predicted coding region MJECL14 [Metha... 141 1e-32
sp|Q58412|YA06_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1006 >gi... 137 2e-31
sp|Q58042|Y625_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0625 >gi... 132 4e-30
gi|10954515 M. jannaschii predicted coding region MJECL26 [Metha... 131 1e-29
sp|Q58476|YA76_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1076 >gi... 125 9e-28
>sp|Q9UZE8|Y800_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB0800 >gi|7520929|pir||B75101
probable ATP-binding protein PAB0800 - Pyrococcus abyssi
(strain Orsay) >gi|5458623|emb|CAB50111.1| (AJ248286)
hypothetical ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 326
Score = 651 bits (1662), Expect = 0.0
Identities = 326/326 (100%), Positives = 326/326 (100%)
Query: 1 MFFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFSKRLPREYIVFNINLRGRF 60
MFFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFSKRLPREYIVFNINLRGRF
Sbjct: 1 MFFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFSKRLPREYIVFNINLRGRF 60
Query: 61 IREEKDFIKVLFMKKEESESIKNSYKGIPIPEGILNEILENPFLFLEEYFEEINNSGRIP 120
IREEKDFIKVLFMKKEESESIKNSYKGIPIPEGILNEILENPFLFLEEYFEEINNSGRIP
Sbjct: 61 IREEKDFIKVLFMKKEESESIKNSYKGIPIPEGILNEILENPFLFLEEYFEEINNSGRIP 120
Query: 121 VLILDELQVIGDLRIDDLLIYKLFNFFVRLTKELHLAHVFVATSDSLFLERVHGEAMLHG 180
VLILDELQVIGDLRIDDLLIYKLFNFFVRLTKELHLAHVFVATSDSLFLERVHGEAMLHG
Sbjct: 121 VLILDELQVIGDLRIDDLLIYKLFNFFVRLTKELHLAHVFVATSDSLFLERVHGEAMLHG 180
Query: 181 RSRFMLVDDFDERTTLEFLTSNGLSEEEAKIAWHYLGGKPSYLVDLLQRSRIRVEDYCKE 240
RSRFMLVDDFDERTTLEFLTSNGLSEEEAKIAWHYLGGKPSYLVDLLQRSRIRVEDYCKE
Sbjct: 181 RSRFMLVDDFDERTTLEFLTSNGLSEEEAKIAWHYLGGKPSYLVDLLQRSRIRVEDYCKE 240
Query: 241 ALKWRTSQILDSLYTLKGRKLRKVIELLSKFRENDEITYGPLSEEIVWSVRNNILFADPR 300
ALKWRTSQILDSLYTLKGRKLRKVIELLSKFRENDEITYGPLSEEIVWSVRNNILFADPR
Sbjct: 241 ALKWRTSQILDSLYTLKGRKLRKVIELLSKFRENDEITYGPLSEEIVWSVRNNILFADPR 300
Query: 301 ERKLRPQGRLEKHAIELALEKLRNNF 326
ERKLRPQGRLEKHAIELALEKLRNNF
Sbjct: 301 ERKLRPQGRLEKHAIELALEKLRNNF 326
>sp|Q9V050|Y634_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB0634 >gi|7517902|pir||C75069
hypothetical protein PAB0634 - Pyrococcus abyssi (strain
Orsay) >gi|5458368|emb|CAB49856.1| (AJ248286)
hypothetical protein [Pyrococcus abyssi]
Length = 339
Score = 329 bits (834), Expect = 3e-89
Identities = 170/337 (50%), Positives = 231/337 (68%), Gaps = 18/337 (5%)
Query: 1 MFFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFSKRLPREYIVFNINLRGRF 60
MFF+RE+ELE+L LVS++P++ITF YGPINSGKT L++EF K+LP ++I F INLR
Sbjct: 1 MFFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDDHIAFYINLRRTP 60
Query: 61 IREEKDFIKVLFMK---------KEESESIKNSYK---GIPIPEGILNEILE-----NPF 103
I DF+ VLF KE + ++ K G P+P +L I + N F
Sbjct: 61 ITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGKETFGFPVPTELLARITKEKKPKNAF 120
Query: 104 LFLEEYFEEINNSGRIPVLILDELQVIGDLRIDDLLIYKLFNFFVRLTKELHLAHVFVAT 163
++ EE+ +G+ P+LILDELQVIGDL++D LIY+LFNFF+ LTKE HL+HVFV T
Sbjct: 121 AYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIHLTKESHLSHVFVVT 180
Query: 164 SDSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEFLTSNGLSEEEAKIAWHYLGGKPSYL 223
SDSLF+ERV+ EAML GR+ + LVDDF T L FL +NGLS++EA++ W+Y GGKP YL
Sbjct: 181 SDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLKNNGLSDDEAELVWNYFGGKPVYL 240
Query: 224 VDLLQRSRIRVEDYCKEALKWRTSQILDSLYTLKGRKLRKVIELLSKFRENDEITYGPLS 283
+ + + R ++++C+ LK RTSQILD LY L+ KV++L F + + + Y LS
Sbjct: 241 AETI-KHRDELKEWCERMLKLRTSQILDELYALEKELFEKVVKLFFAFEKQESVPYRSLS 299
Query: 284 EEIVWSVRNNILFADPRERKLRPQGRLEKHAIELALE 320
EEI+W+V+ NILFA+P +R LRPQGRLE AI+ L+
Sbjct: 300 EEILWAVKRNILFAEPVDRVLRPQGRLELLAIKRILD 336
>sp|Q9V103|YJ45_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB1945 >gi|7514286|pir||E75183
ATP-binding protein PAB1945 - Pyrococcus abyssi (strain
Orsay) >gi|5458058|emb|CAB49548.1| (AJ248284)
ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 335
Score = 308 bits (780), Expect = 7e-83
Identities = 167/341 (48%), Positives = 228/341 (65%), Gaps = 26/341 (7%)
Query: 1 MFFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFSKRLPREYIVFNINLRGRF 60
MFFDREKEL +L ++ S+PS+ITF YGPINSGKT L+ EF +++P Y+ F INLR
Sbjct: 1 MFFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDHYVAFYINLRATP 60
Query: 61 IREEKDFIKVLFMKKEESESIKNSYK-------------GIPIPEGILNEIL-----ENP 102
I + +DFI +LF + E+ IKN + GIPIP L +IL +N
Sbjct: 61 ITKYEDFIDILFSIEFENP-IKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNA 119
Query: 103 FLFLEEYFEEINNSGRIPVLILDELQVIGDLRIDDLLIYKLFNFFVRLTKELHLAHVFVA 162
FL++ + E+ G+ P+LILDELQVIGDLRI+ LIY++FNFF+ LTKE HL+HVF
Sbjct: 120 FLYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFIHLTKEAHLSHVFTI 179
Query: 163 TSDSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEFLTSNGLSEEEAKIAWHYLGGKPSY 222
TSDSLF+ER++ EAML GR+ + LVDDFDE+T L FL S GL+EEEA +A Y GGKP Y
Sbjct: 180 TSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLKSQGLTEEEANLALEYFGGKPPY 239
Query: 223 LVDLLQRSRIRVEDYCKEALKWRTSQILDSLYTLKGRKLRKVIELLSKFRENDEITY-GP 281
L++ + + R +EDYCK+AL RT Q+ Y G+ R++I+LL++F+ +E+ + G
Sbjct: 240 LIEAI-KHREELEDYCKKALAMRTRQVYSFAY---GK--RRIIKLLTEFKNKEEVPFTGK 293
Query: 282 LSEEIVWSVRNNILFADPRERKLRPQGRLEKHAIELALEKL 322
++ + +V+ NILF DP ++PQGRLE AI AL L
Sbjct: 294 VTRTLEEAVKANILFVDPLNGIIKPQGRLELLAIREALRML 334
>sp|Q59053|YG59_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1659 >gi|2129000|pir||A64507
hypothetical protein MJ1659 - Methanococcus jannaschii
>gi|1592240|gb|AAB99686.1| (U67606) M. jannaschii
predicted coding region MJ1659 [Methanococcus
jannaschii]
Length = 361
Score = 284 bits (719), Expect = 1e-75
Identities = 159/354 (44%), Positives = 221/354 (61%), Gaps = 32/354 (9%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEF-SKRLPRE-YIVFNINLRGR 59
FFDREKE+ L ++S +P++I F YGPINSGKTTL+ +L R+ Y+VF INLR
Sbjct: 7 FFDREKEINYLVKVLSFEPNLIYFIYGPINSGKTTLIKHIIENKLDRDKYVVFYINLREH 66
Query: 60 FIREEKDFIKVLFMKKEES--ESIKNSY------------------KGIPIPEGILNEIL 99
FI + +DFI+VLF EE+ E +K GIP+P+ LNE L
Sbjct: 67 FISKYEDFIEVLFNTYEETFIEKLKKYLLSFINDLPKNIDVKSTILTGIPVPKNTLNEFL 126
Query: 100 -----ENPFLFLEEYFEEINNSGRIPVLILDELQVIGDLRIDDLLIYKLFNFFVRLTKEL 154
EN F +L + FE+I G+ P+LI+DELQ IGDL+I+ LIY+LFNFF+ LTKE
Sbjct: 127 STKNSENVFEYLTKIFEDIKKKGKQPILIIDELQKIGDLKINGFLIYELFNFFIDLTKEK 186
Query: 155 HLAHVFVATSDSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEFLTSNGLSEEEAKIAWH 214
HL HV +SDSLF+ERV+ E L R ++ LVDDFD +TT FL + ++EE I WH
Sbjct: 187 HLCHVLCLSSDSLFIERVYNEGTLKDRCKYYLVDDFDYKTTKAFLKKHNFNDEEIDIVWH 246
Query: 215 YLGGKPSYLVDLLQRSRI--RVEDYCKEALKWRTSQILDSLYTLKG---RKLRKVIELLS 269
Y GGKP LV+ +Q + V+++CK++L+ R Q+ D LY+L+ +VI+L
Sbjct: 247 YFGGKPIKLVEAIQEKLLGEDVKEFCKKSLRVRKRQLKDLLYSLEDDNKELFERVIKLFE 306
Query: 270 KFRENDEITYGPLSEEIVWSVRNNILFADPRERKLRPQGRLEKHAIELALEKLR 323
F+ DEI Y +SEEIVW+V+ NILF + E L+PQ +L+ AI L++++
Sbjct: 307 NFKNRDEIFYEKISEEIVWTVKKNILFVNIEEGILKPQSKLDLLAIREILDEIK 360
>sp|O58276|Y541_PYRHO HYPOTHETICAL ATP-BINDING PROTEIN PH0541 >gi|7518700|pir||A71168
hypothetical protein PH0541 - Pyrococcus horikoshii
>gi|3256947|dbj|BAA29630.1| (AP000002) 321aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 321
Score = 258 bits (652), Expect = 7e-68
Identities = 147/333 (44%), Positives = 203/333 (60%), Gaps = 26/333 (7%)
Query: 1 MFFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFSKRLPREYIVFNINLRGRF 60
MFFDRE+E+E L + +S +P+M+TF YGPINSGKTTL+ EF KR +Y+ F IN R
Sbjct: 1 MFFDREEEIERLLEDISYEPNMVTFVYGPINSGKTTLIQEFLKRTSEKYVGFYINFRKTP 60
Query: 61 IREEKDFIKVLFMKKEESESIKN--SYKG-----IPIPEGILNEILE-----NPFLFLEE 108
+ ++F +VLF + IK+ S G IPIP +LN+IL N F +L E
Sbjct: 61 VANYEEFSRVLFSFDSRIKMIKDVISILGKVNPWIPIPREVLNDILRDKEPINAFSYLRE 120
Query: 109 YFEEINNSGRIPVLILDELQVIGDLRIDDLLIYKLFNFFVRLTKELHLAHVFVATSDSLF 168
EEI +SG++P+L+ DELQVI DL+++ LIY+LFNF + L+KE HLAHVF TSDSLF
Sbjct: 121 VLEEIRSSGKMPILVFDELQVIKDLKVNGSLIYQLFNFLIHLSKEAHLAHVFAVTSDSLF 180
Query: 169 LERVHGEAMLHGRSRFMLVDDFDERTTLEFLTSNGLSEEEAKIAWHYLGGKPSYLVDLLQ 228
+ + G A L GR+ + V D E +EFL LSEEE+++ Y GGKPSYLV+
Sbjct: 181 ISEIFGNAKLSGRASYFPVYDLPEEKAIEFLLRLNLSEEESRLVVEYFGGKPSYLVE-AP 239
Query: 229 RSRIRVEDYCKEALKWRTSQILDSLYTLKGRKLRKV-IELLSKFRENDEITYGPLSEEIV 287
+ R + ++C+ L TL+ R++R+ LL +F + +E+ LSEE +
Sbjct: 240 KHRKHLREWCEREL------------TLRAREIRRFKSNLLLEFMDEEEVEVEELSEEAI 287
Query: 288 WSVRNNILFADPRERKLRPQGRLEKHAIELALE 320
V NILF DP LRPQG+LE AI ++
Sbjct: 288 NLVNANILFYDPLRGTLRPQGKLELLAIRKVIK 320
>sp|Q57881|Y439_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0439 >gi|2128324|pir||G64354
hypothetical protein MJ0439 - Methanococcus jannaschii
>gi|1591143|gb|AAB98434.1| (U67495) M. jannaschii
predicted coding region MJ0439 [Methanococcus
jannaschii]
Length = 361
Score = 229 bits (578), Expect = 3e-59
Identities = 136/347 (39%), Positives = 215/347 (61%), Gaps = 29/347 (8%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEF-SKRLPR-EYIVFNINLRGR 59
FF+REKE+ E+ ++ P ++ F YGP+NSGKT L+ E + R+ + +Y+VF INLRG
Sbjct: 15 FFNREKEITEILSILEGNPDLVYFVYGPLNSGKTALISEIINNRIDKNKYVVFYINLRGI 74
Query: 60 FIREEKDFIKVLFMKKEES----ESIKNSYK------GIPIPEGILNEILE-----NPFL 104
FI + KDFI+VLF + EE E IK+ K GIP P+ L EIL+ N F
Sbjct: 75 FISKYKDFIEVLFEEYEEDRKPVEIIKSLIKDVPSLCGIPTPKNTLEEILKKKTTKNVFK 134
Query: 105 FLEEYFEEINNSGRIPVLILDELQVIGDLRIDDLLIYKLFNFFVRLTKELHLAHVFVATS 164
++ +I G+ P++I+DELQ IGD++I+ LIY+LFN+FV LTKELHL HVF +S
Sbjct: 135 YITNVLMDIKKEGKQPIIIIDELQKIGDMKINGFLIYELFNYFVDLTKELHLCHVFCLSS 194
Query: 165 DSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEF-------LTSNGLSEEEAKIAWHYLG 217
DSLF+E+V+ EAML R ++LVDDFD+ T L+F + + LS++E ++ + Y+G
Sbjct: 195 DSLFIEQVYSEAMLKDRVDYILVDDFDKETALKFMDFLAEEILNKKLSDDEKELIYSYVG 254
Query: 218 GKPSYLVDLLQRSRIR-VEDYCKEALKWRTSQILDSLYTLKGR---KLRKVIELLSKFRE 273
GKP ++ ++++ +I+ +++ E L+ ++ L +K + K+ + L F++
Sbjct: 255 GKPILIIKVIKKLKIKGLKETLDEMLRDEMQKLKYFLEDIKEKDEESYNKIADALEIFKD 314
Query: 274 NDEITYGPLSEEI-VWSVRNNILFADPRERKLRPQGRLEKHAIELAL 319
+ EI + + I + V+ NILF +P++ L+PQ L +AI+ L
Sbjct: 315 SYEIEDIKIPKNIREFLVKKNILFLNPQKGTLKPQSYLVWNAIKRLL 361
>sp|Q60380|Y074_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0074 >gi|2128114|pir||B64309
hypothetical protein MJ0074 - Methanococcus jannaschii
>gi|1590860|gb|AAB98056.1| (U67464) M. jannaschii
predicted coding region MJ0074 [Methanococcus
jannaschii]
Length = 358
Score = 219 bits (552), Expect = 4e-56
Identities = 138/356 (38%), Positives = 209/356 (57%), Gaps = 38/356 (10%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEF-SKRLPRE-YIVFNINLRGR 59
FFDREKE+ E+ +++ +P + F YGPINSGKT L+ E + RL ++ Y+VF +LR
Sbjct: 3 FFDREKEIAEILHILNREPDDVYFIYGPINSGKTALINEIINNRLDKDKYVVFYFDLREI 62
Query: 60 FIREEKDFIKVLFMK----KEESESIKNSYK------GIPIPEGILNEILE-----NPFL 104
FI + DFI+VLF + K+ E IK+ K GIP P+ L EIL+ N F
Sbjct: 63 FISKYDDFIEVLFEEYEGNKKPVEIIKSLIKDVPSLCGIPAPKNTLEEILKKKTTKNVFR 122
Query: 105 FLEEYFEEINNSGRIPVLILDELQVIGDLRIDDLLIYKLFNFFVRLTKELHLAHVFVATS 164
++ + +I G+ P+LI+DELQ IGD++I+ LIY+LFN+FV LTK HL HVF +S
Sbjct: 123 YITKVLMDIKKEGKQPILIIDELQKIGDMKINGFLIYELFNYFVSLTKHKHLCHVFCLSS 182
Query: 165 DSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEFL------TSNGLSEEEAKIAWHYLGG 218
DSLF+ERV+ EAML GR++++LVDDFD+ T L+F+ + L+ E+ ++ ++Y+GG
Sbjct: 183 DSLFIERVYNEAMLDGRAKYLLVDDFDKETALKFMDFLAKENNISLTNEDKELIYNYVGG 242
Query: 219 KPSYLVDLLQRSRIR----VEDYCKEALKWRTSQILDSLYTLKGR----------KLRKV 264
KP + +++ S + V DY + L+ L K R +
Sbjct: 243 KPKDIKYVVEESNFKDLKEVLDYLLNDEISKLDMFLEILDYSKPRVEVGNEVIEINKEDI 302
Query: 265 IELLSKFRENDEITYGPLSEEI-VWSVRNNILFADPRERKLRPQGRLEKHAIELAL 319
I+ L F++ EI + + V+ V+ NILF +P++R L+PQ L +AI+ L
Sbjct: 303 IKALRLFKDKYEIPKKDIPTPVYVYLVKENILFLNPQKRILKPQSYLVWNAIKRLL 358
>sp|Q58049|Y632_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0632 >gi|2128418|pir||H64378
hypothetical protein MJ0632 - Methanococcus jannaschii
>gi|1591343|gb|AAB98624.1| (U67510) replication
initiator protein, putative (dnaA) [Methanococcus
jannaschii]
Length = 363
Score = 217 bits (546), Expect = 2e-55
Identities = 134/361 (37%), Positives = 210/361 (58%), Gaps = 43/361 (11%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEF-SKRLPRE-YIVFNINLRGR 59
FF+REKE+EE+ ++ S+P I F +G INSGKT L+ E + RL ++ Y+VF +LR
Sbjct: 3 FFNREKEIEEILHIIESEPQRINFIFGSINSGKTALINEIINNRLNKDKYVVFYFDLREI 62
Query: 60 FIREEKDFIKVLFMKKEES--ESIKNSY-----------------------KGIPIPEGI 94
FI + DFI+VLF + EE + +K + IPIP+
Sbjct: 63 FISKYDDFIEVLFEEYEEPFIDKVKRLFLSLIKDYPDVIKSYALLNITGVVDSIPIPKNT 122
Query: 95 LNEILE-----NPFLFLEEYFEEINNSGRIPVLILDELQVIGDLRIDDLLIYKLFNFFVR 149
LNE+L+ N F ++ +I G+ P++I+DELQ IGDL+++ LIY+LFN+FV
Sbjct: 123 LNELLKKRNVKNVFRYITSVLIKIKREGKQPIIIIDELQKIGDLKLNGFLIYELFNYFVS 182
Query: 150 LTKELHLAHVFVATSDSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEFL------TSNG 203
LTK HL HVF +SDSLF+ERV+ EAML GR +++LVDDFD T L+F+ +
Sbjct: 183 LTKHKHLCHVFCLSSDSLFIERVYNEAMLEGRCKYILVDDFDRETALKFMDFLAKENNIN 242
Query: 204 LSEEEAKIAWHYLGGKPSYLVDLLQRSRI-RVEDYCKEALKWRTSQILDSLYTLKGRK-- 260
L+ E+ ++ ++Y+GGKP ++ ++ + ++ED LK T ++ L +K
Sbjct: 243 LTNEDKELIYNYVGGKPIDIIYVINEMKYKKLEDILTSMLKEETQKLKYFLENVKEEDEE 302
Query: 261 -LRKVIELLSKFRENDEITYGPLSEEI-VWSVRNNILFADPRERKLRPQGRLEKHAIELA 318
+KV++ L F+++ EI + +++ + V+ NILF +P E L+PQ L +AI+
Sbjct: 303 LYKKVVDALKIFKDSYEIEDIKIPKKLREFLVKKNILFLNPIEGTLKPQSFLVWNAIKRI 362
Query: 319 L 319
L
Sbjct: 363 L 363
>sp|Q57611|Y147_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0147 >gi|2128154|pir||D64318
hypothetical protein MJ0147 - Methanococcus jannaschii
>gi|1590908|gb|AAB98139.1| (U67472) M. jannaschii
predicted coding region MJ0147 [Methanococcus
jannaschii]
Length = 371
Score = 205 bits (516), Expect = 6e-52
Identities = 132/362 (36%), Positives = 204/362 (55%), Gaps = 44/362 (12%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEF-SKRLPREYIVFNINLRGRF 60
FF+REKE+ E+ ++ +P++I F YGP+NSGKT L+ +L +Y VF IN R
Sbjct: 7 FFNREKEIHEILSILEGEPNIIYFIYGPLNSGKTALIKHIIENKLSDDYKVFYINFRTYL 66
Query: 61 IREEKDFIKVLFMKKEES--ESIKNSYK-------------GIPIPE----GILNEILEN 101
I E+++FI+ +F K++ E IK+ + GIPIPE + E + +
Sbjct: 67 ISEKREFIEAIFTTKKDDFFEKIKDKSEVLNLITKGAKILTGIPIPEVEFDKLFEEKIND 126
Query: 102 PFLFLEEYFEEINNSGRIPVLILDELQVIGDLRID--DLLIYKLFNFFVRLTKELHLAHV 159
F +L E+ SG+ PVLILDELQ+I D+ ++ L+ +LF F V LTKE HL HV
Sbjct: 127 AFQYLNSILLEVKKSGKQPVLILDELQMIKDVVLNWQKYLLKELFQFLVSLTKEQHLCHV 186
Query: 160 FVATSDSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEF-------LTSNGLSEEEAKIA 212
F +SDSLF+E V+ L GR++++LVDDFD+ T L+F + + LS+E+ ++
Sbjct: 187 FCLSSDSLFIEYVYSAGELEGRAKYLLVDDFDKETALKFMDFLAKEILNKKLSDEDKELI 246
Query: 213 WHYLGGKPSYLVDLLQRSRIR-VEDYCKEALKWRTSQI---LDSLYTLKGR--------- 259
++Y+GGKP Y+ ++ R R +ED LK T ++ L L +K +
Sbjct: 247 YNYVGGKPVYIYSVIDEMRYRKLEDILNLMLKEETQKLKYFLKELDYIKPKVELKDEIIE 306
Query: 260 -KLRKVIELLSKFRENDEITYGPLSEEI-VWSVRNNILFADPRERKLRPQGRLEKHAIEL 317
K +I L F+EN E++ + E + ++ V+ NILF +P E L+PQ L +AI+
Sbjct: 307 IKKDDIINALKLFKENYEVSDDDIPEPVYIYLVKKNILFLNPIEGILKPQSFLIWNAIKK 366
Query: 318 AL 319
L
Sbjct: 367 LL 368
>sp|Q60388|Y075_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0075 >gi|2128115|pir||C64309
hypothetical protein MJ0075 - Methanococcus jannaschii
>gi|1590862|gb|AAB98065.1| (U67465) M. jannaschii
predicted coding region MJ0075 [Methanococcus
jannaschii]
Length = 365
Score = 199 bits (502), Expect = 3e-50
Identities = 134/360 (37%), Positives = 197/360 (54%), Gaps = 44/360 (12%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFSKRLP--REYIVFNINLRGR 59
FFDRE+E+ E+ ++ P I F YGPINSGKTTL++E RL ++Y +F NLRG
Sbjct: 5 FFDREREINEILGILDETPDNIYFIYGPINSGKTTLMMEIINRLKDDKKYRIFYYNLRGV 64
Query: 60 FIREEKDFIKVLFMKKEES-------------ESIKNSYK-------GIPIPEGILNEIL 99
I DF ++F +E++ E IK K I +P + IL
Sbjct: 65 RISSYSDFFDIMFEIREDNKFKQMVKDADVLVEGIKFIEKTAKLFNESIILPSDLAKVIL 124
Query: 100 ENP-----FLFLEEYFEEINNSGRIPVLILDELQVIGDLRIDDLLIYKLFNFFVRLTKEL 154
F +LE F E+N G PV+I+DELQ + L+ + LI LFNFFVRLTKEL
Sbjct: 125 SKQKGFDVFRYLERVFREMNKKGLKPVIIIDELQRLKGLKSNGELIDDLFNFFVRLTKEL 184
Query: 155 HLAHVFVATSDSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEF-------LTSNGLSEE 207
H+ H F +SDSLF+E V+ A L GR+ ++LVDDFD+ T L+F + LSE+
Sbjct: 185 HITHCFCLSSDSLFIEYVYDRAELRGRADYILVDDFDKETALKFMDFLSEDILGRKLSED 244
Query: 208 EAKIAWHYLGGKPSYLVDLLQRSRIRVEDYCKEALKWRTSQILDSL-YTLKGRK------ 260
E ++ + Y+GGKP + D++ + ++ E K+ L++ + + L Y L+ K
Sbjct: 245 EKELIYSYVGGKPKDVYDVIIKLKLGKE--LKDILEFMLKEEIQKLKYFLEDVKEDDEEL 302
Query: 261 LRKVIELLSKFRENDEITYGPLSEEI-VWSVRNNILFADPRERKLRPQGRLEKHAIELAL 319
K+++ L F+EN EI + + I + V+ NILF +P E L+PQ L +AI+ L
Sbjct: 303 YNKIVDALKIFKENYEIEDIKIPKNIREFLVKKNILFLNPIEGTLKPQSFLVWNAIKKLL 362
>sp|Q58416|YA10_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1010 >gi|2128629|pir||A64426
hypothetical protein MJ1010 - Methanococcus jannaschii
>gi|1591669|gb|AAB99015.1| (U67543) M. jannaschii
predicted coding region MJ1010 [Methanococcus
jannaschii]
Length = 377
Score = 198 bits (499), Expect = 6e-50
Identities = 134/372 (36%), Positives = 210/372 (56%), Gaps = 54/372 (14%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEF-SKRLPR-EYIVFNINLRGR 59
FF+R +E++E+ ++ +P++I F YGPINSGKT L+ E + RL + +Y+VF I+LR
Sbjct: 6 FFNRVEEIKEILSILEEEPNLIYFIYGPINSGKTALINEIINNRLDKNKYVVFYIDLREI 65
Query: 60 FIREEKDF---------------IKVLFMKKEES----ESIKNSYK------GIPIPEGI 94
FI + +F I+VLF + E+ E I++ K GIP P+
Sbjct: 66 FISKYDEFEAKLRATKTFGFRLIIEVLFEEYEDDKKPIEIIRSLIKDAPSLCGIPTPKNT 125
Query: 95 LNEILE-----NPFLFLEEYFEEINNSGRIPVLILDELQVIGDLRIDDLLIYKLFNFFVR 149
L EIL+ N F ++ +I G+ P++I+DELQ IGD++I+ LIY+LFN+FV
Sbjct: 126 LEEILKKKTTKNVFKYITNILMDIKREGKQPIIIIDELQKIGDMKINGFLIYELFNYFVS 185
Query: 150 LTKELHLAHVFVATSDSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEF-------LTSN 202
LTK HL HVF +SDSLF+ERV+ EAML R ++LVDDFD+ T L+F + +
Sbjct: 186 LTKHKHLCHVFCLSSDSLFIERVYNEAMLKERVDYILVDDFDKETALKFIDFLSEEILNK 245
Query: 203 GLSEEEAKIAWHYLGGKPSYLVDLLQRSRIR-VEDYCKEALKWRTSQILDSLYTLKGRK- 260
LS+E+ ++ + Y+GGKP +++++ + + + ++D L S++ D L L K
Sbjct: 246 KLSDEDKELIYSYVGGKPILIINVIGKLKHKNLKDVLNILLMDEISKLKDFLSNLDYIKP 305
Query: 261 ----------LRK--VIELLSKFRENDEITYGPLSEEI-VWSVRNNILFADPRERKLRPQ 307
+RK +I L F+ EI + + + V+ V+ NILF P+ L+PQ
Sbjct: 306 KVNIEEEIIEIRKEDIINALKLFKGKYEIEVDKIPKAVYVYLVKKNILFLYPQRGTLKPQ 365
Query: 308 GRLEKHAIELAL 319
L +AI+ L
Sbjct: 366 SFLVWNAIKRVL 377
>sp|Q58697|YD01_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1301 >gi|2128773|pir||D64462
hypothetical protein MJ1301 - Methanococcus jannaschii
>gi|1592328|gb|AAB99326.1| (U67571) M. jannaschii
predicted coding region MJ1301 [Methanococcus
jannaschii]
Length = 400
Score = 197 bits (496), Expect = 1e-49
Identities = 136/391 (34%), Positives = 208/391 (52%), Gaps = 73/391 (18%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEF-SKRLPR-EYIVFNINLRGR 59
FF+REKE+ ++ ++ +P++I F YG INSGKT L+ E + RL + +YIVF +LR
Sbjct: 10 FFNREKEIHKILSIIEGEPNLIYFIYGSINSGKTALINEIINNRLDKNKYIVFYFDLREI 69
Query: 60 FIREEKDFIKVLFMKKEESES-------IKN---SYKGIPIPEGILNEILE-----NPFL 104
FI + DFI+VLF + E +S I N S GIPIP+ LNEI + N F
Sbjct: 70 FISKYDDFIEVLFEEYEGDKSPIEVIKAIINDLPSLYGIPIPKNTLNEIFKKKTTKNVFR 129
Query: 105 FLEEYFEEINNSGRIPVLILDELQVIGDLRIDDLLIYKLFNFFVRLTKELHLAHVFVATS 164
++ +I G+ P++I+DELQ IGD++I+ LIY+LFN+FV LTK HL HVF +S
Sbjct: 130 YITNVLMDIKREGKQPIIIIDELQKIGDMKINGFLIYELFNYFVSLTKHKHLCHVFCLSS 189
Query: 165 DSLFLERVHGEAMLHG-------------------------------------------- 180
DSLF+ERV+ EAML
Sbjct: 190 DSLFIERVYNEAMLEDRVDYILVDDHRGGYAPSIGILPQIESGVAFGNPALEYSNRGFAS 249
Query: 181 -RSRFMLVDDFDERTTLEFL------TSNGLSEEEAKIAWHYLGGKPSYLVDLLQRSRI- 232
R ++LVDDFD+ T L+F+ + L+ E+ ++ ++Y+GGKP ++ ++ + R
Sbjct: 250 MRGEYILVDDFDKETALKFMDFLAKENNMSLTNEDKELIYNYVGGKPVLIIKVIDKLRYE 309
Query: 233 RVEDYCKEALKWRTSQILDSLYTLKGRK---LRKVIELLSKFRENDEITYGPLSEEI-VW 288
+ D LK T ++ L +K +KV++ L F+E+ EI + ++I +
Sbjct: 310 NLNDILDFMLKDATQKLKYFLEDVKEEDEELYKKVVDALKLFKEDYEIEDIKIPKKIREF 369
Query: 289 SVRNNILFADPRERKLRPQGRLEKHAIELAL 319
++ NILF +P E L+PQ L +AI+ L
Sbjct: 370 LIKRNILFLNPIEGILKPQSFLVWNAIKKVL 400
>sp|Q58211|Y801_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0801 >gi|2128513|pir||A64400
hypothetical protein MJ0801 - Methanococcus jannaschii
>gi|1499623|gb|AAB98799.1| (U67524) M. jannaschii
predicted coding region MJ0801 [Methanococcus
jannaschii]
Length = 379
Score = 182 bits (457), Expect = 5e-45
Identities = 124/378 (32%), Positives = 199/378 (51%), Gaps = 61/378 (16%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEF-SKRLPREYIVFNINLRGRF 60
FFDRE+E+ E+ +++ +P I F YGP+NSGKT L+ +L +Y VF IN R
Sbjct: 3 FFDREREINEILHILNREPDDIYFIYGPLNSGKTALIKHIIENKLSDDYKVFYINFRTYL 62
Query: 61 IREEKDFIKVLFMKKEES--ESIKNSYK-------------GIPIPE----GILNEILEN 101
I E+++FI+ +F K++ E IK+ + GIPIPE + E + +
Sbjct: 63 ISEKREFIEAIFTTKKDDFFEKIKDKDEVLNLITKGVRILTGIPIPEVEFDKLFEEKIND 122
Query: 102 PFLFLEEYFEEINNSGRIPVLILDELQVIGDLRIDD------------------LLIYKL 143
F +L E+ SG+ P+LI DELQ+I D+ ++ L+ +L
Sbjct: 123 AFQYLNSLLLEVKKSGKKPILIFDELQMIKDVVLNTENQRFSAFPSLRFGNGQKYLLKEL 182
Query: 144 FNFFVRLTKELHLAHVFVATSDSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEFL---- 199
F F V LTKE HL HVF +SDSLF+E V+ L GR++++LVDDFD+ T L+F+
Sbjct: 183 FQFLVSLTKEQHLCHVFCLSSDSLFIEYVYSTGELEGRAKYLLVDDFDKETALKFMDFLA 242
Query: 200 --TSNGLSEEEAKIAWHYLGGKPSYLVDLLQRSRIR-----VEDYCKEALKWRTSQILDS 252
+ L+ E+ ++ + Y+GGKP + +++ S+ + +E K+A++ + LD
Sbjct: 243 VENNINLTNEDKELIYSYVGGKPKDIKYVVEESKFKDLREILEFMLKDAVQ-KLDMFLDM 301
Query: 253 LYTLKGR----------KLRKVIELLSKFRENDEITYGPLSEEI-VWSVRNNILFADPRE 301
L K + K VIE L F++ E++ + + + ++ NILF +P E
Sbjct: 302 LNYSKPKVDVGDEVIEIKKDNVIEALKLFKDEYEVSKKHIPVPVYTYLIKRNILFLNPIE 361
Query: 302 RKLRPQGRLEKHAIELAL 319
L+PQ L +AI+ L
Sbjct: 362 GILKPQSYLVWNAIKRLL 379
>gi|10954506 M. jannaschii predicted coding region MJECL15 [Methanococcus
jannaschii] >gi|2496257|sp|Q60277|YZ15_METJA
HYPOTHETICAL ATP-BINDING PROTEIN MJECL15
>gi|2129032|pir||G64511 hypothetical protein MJECL15 -
Methanococcus jannaschii plasmid pURB800
>gi|1522655|gb|AAC37088.1| (L77118) M. jannaschii
predicted coding region MJECL15 [Methanococcus
jannaschii]
Length = 365
Score = 180 bits (451), Expect = 3e-44
Identities = 120/363 (33%), Positives = 199/363 (54%), Gaps = 45/363 (12%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIE-FSKRLPR-EYIVFNINLRGR 59
FF+REKE+ E+ ++ +P+ I F YGP+NSGK+TL+ E + RL + +YI F I+ R R
Sbjct: 3 FFNREKEINEILLILEEEPNNIYFIYGPLNSGKSTLIREVITNRLDKSKYIPFFIDFRTR 62
Query: 60 FIREEKDFIKVLFMKKEES--------------------ESIKNSYKGIPI--PEGILNE 97
I +FI+ LF E+S E I Y G+PI P+ +
Sbjct: 63 NILNVDNFIECLFEVDEKSKIDDFREYAKSLADLLVKGSEEISKYYLGMPIKVPKPFFDR 122
Query: 98 ILE------NPFLFLEEYFEEINNSGRIPVLILDELQVIGDLRIDD--LLIYKLFNFFVR 149
I + + ++E F ++N G+ P+LI DELQ+I ++ ++ LL++ LF F V
Sbjct: 123 IFSKRDKSADVYQYIEYLFAKLNEKGKKPILIFDELQMIREITLNGNRLLLWSLFQFLVA 182
Query: 150 LTKELHLAHVFVATSDSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEFL------TSNG 203
LTK HL HVF +SDSLF+E ++G+A L G ++LVDDFD++T L+F+ +
Sbjct: 183 LTKVQHLCHVFCLSSDSLFIEYIYGKAELKGGVDYILVDDFDKKTALKFMDFLAKQKNIN 242
Query: 204 LSEEEAKIAWHYLGGKPSYLVDLLQRSR-IRVEDYCKEALKWRTSQILDSLY-----TLK 257
L+ E+ ++ + Y+GGK Y+ D++ + + ++ Y E L+ L +
Sbjct: 243 LTNEDKELIYSYVGGKAKYIYDVIVKLKAVKDLKYILETKLEEERNHLEELLEKVEEDYE 302
Query: 258 GRKLRKVIELLSKFRENDEITYGPLSEEI-VWSVRNNILFADPRERKLRPQGRLEKHAIE 316
G +V+E L F++N E+ + +I ++ ++ NILF +P++ L+PQ L +AI+
Sbjct: 303 GINYDEVLEALKLFKDNYELPKSKIKRKIRIFLIKENILFLNPQKGTLKPQSYLVWNAIK 362
Query: 317 LAL 319
L
Sbjct: 363 RML 365
>sp|Q59004|YG09_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1609 >gi|2128966|pir||H64500
hypothetical protein MJ1609 - Methanococcus jannaschii
>gi|1500507|gb|AAB99636.1| (U67601) M. jannaschii
predicted coding region MJ1609 [Methanococcus
jannaschii]
Length = 374
Score = 169 bits (423), Expect = 5e-41
Identities = 118/372 (31%), Positives = 197/372 (52%), Gaps = 54/372 (14%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFS-KRLP-REYIVFNINLRGR 59
FF+REKE+ ++ ++ +P+ I F YG +NSGK+TL+ E RL +YI F I+ R R
Sbjct: 3 FFNREKEINKILSIIEGEPNNIYFIYGSLNSGKSTLMREIVVNRLDISKYIPFFIDFRTR 62
Query: 60 FIREEKDFIKVLFMKKEESE--------------------SIKNSYKGIPI--PEGILNE 97
I +FI+ LF E+SE I Y G+PI P+ ++
Sbjct: 63 NILNVDNFIECLFEVDEKSEIDDFREYAKSLADLLVKGSEEISKYYLGMPIKIPKPFFDK 122
Query: 98 ILENP------FLFLEEYFEEINNSGRIPVLILDELQVIGDLRIDD--LLIYKLFNFFVR 149
I + ++E F ++N G+ P+LI DELQ+I ++ ++ L++ LF F V
Sbjct: 123 IFNKKDKSADVYQYIEYLFAKLNEKGKKPILIFDELQMIKEITLNGNRKLLWSLFQFLVA 182
Query: 150 LTKELHLAHVFVATSDSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEF-------LTSN 202
LTK HL HVF +SDSLF+E V+ L GR+ ++LVDDFD++T L+F + +
Sbjct: 183 LTKVQHLCHVFCLSSDSLFIEYVYKTGELEGRADYILVDDFDKQTALKFIDFLAKEILNK 242
Query: 203 GLSEEEAKIAWHYLGGKPSYLVDLLQRSRIR----VEDYCKEALKWRTSQILDSLYTLKG 258
L ++E ++ + Y+GGKP ++ ++ + R + D+ + + L+ L +K
Sbjct: 243 KLPKDEKELIYSYVGGKPVLIIKVIDKLRYENLNDILDFMLKDATQKLKYFLNDLDYIKP 302
Query: 259 R----------KLRKVIELLSKFRENDEITYGPLSEEI-VWSVRNNILFADPRERKLRPQ 307
+ K +++ L F+++ EI+ +++ I V+ V+ NILF +P E L+PQ
Sbjct: 303 KVEVGDEVIELKKEDIVKALKLFKDSYEISDSEVAKPIYVYLVKKNILFLNPIEGILKPQ 362
Query: 308 GRLEKHAIELAL 319
L +AI+ L
Sbjct: 363 SFLIWNAIKRLL 374
>gi|10954505 M. jannaschii predicted coding region MJECL14 [Methanococcus
jannaschii] >gi|2496256|sp|Q60276|YZ14_METJA
HYPOTHETICAL PROTEIN MJECL14 >gi|2129031|pir||F64511
hypothetical protein MJECL14 - Methanococcus jannaschii
plasmid pURB800 >gi|1522654|gb|AAC37087.1| (L77118) M.
jannaschii predicted coding region MJECL14
[Methanococcus jannaschii]
Length = 314
Score = 141 bits (351), Expect = 1e-32
Identities = 91/265 (34%), Positives = 148/265 (55%), Gaps = 21/265 (7%)
Query: 81 IKNSYKGIPIPEGILNEILENP------FLFLEEYFEEINNSGRIPVLILDELQVIGDLR 134
I N Y GI IPE IL++ F F+ + F +N G PV ILDELQ+I D+
Sbjct: 49 IINLYYGIKIPEPILDKFFGEKEKGGLVFKFIRDLFMSLNKKGVQPVFILDELQMIKDIV 108
Query: 135 IDD--LLIYKLFNFFVRLTKELHLAHVFVATSDSLFLERVHGEAMLHGRSRFMLVDDFDE 192
++ L+ LF F V LTKE H+AHVF +SDSLF+E V+ L GR++++LVDDFD+
Sbjct: 109 MNGGKPLLKSLFQFLVSLTKERHIAHVFCLSSDSLFIEYVYNAGELEGRAKYLLVDDFDK 168
Query: 193 RTTLEFLT------SNGLSEEEAKIAWHYLGGKPSYLVDLLQRSRIR-VEDYCKEALKWR 245
T+L+F+ + L+ E+ ++ + Y+GGK + +++ S+ + + + LK
Sbjct: 169 ETSLKFMDFLAVEGNINLTNEDKELIYSYVGGKAKDIKYVIEESKFKDLREVLDFMLKDE 228
Query: 246 TSQILDSLYTLKGRKL-----RKVIELLSKFRENDEITYGPLSEEI-VWSVRNNILFADP 299
S++ L +K +K+ V++ L F++N EI + E + ++ NILF +P
Sbjct: 229 VSKLRKLLVKIKTKKIAEVEYENVVKALKLFKDNYEINEYLMDENTKEFLIKRNILFLNP 288
Query: 300 RERKLRPQGRLEKHAIELALEKLRN 324
E L+PQ L +AI+ L+ + +
Sbjct: 289 VEEILKPQSYLVWNAIKRVLQNIND 313
>sp|Q58412|YA06_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1006 >gi|2128628|pir||E64425
hypothetical protein MJ1006 - Methanococcus jannaschii
>gi|1591665|gb|AAB99014.1| (U67543) M. jannaschii
predicted coding region MJ1006 [Methanococcus
jannaschii]
Length = 359
Score = 137 bits (341), Expect = 2e-31
Identities = 99/342 (28%), Positives = 170/342 (48%), Gaps = 25/342 (7%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFSKRLPR--EYIVFNINLRGR 59
F++REKEL L + V +P+ I F YGP +SGK+T+++ + L + + + F +LR
Sbjct: 20 FYNREKELNYLKNYVQLEPNSILFVYGPKSSGKSTVMLRVIEELSKKDDLVFFYYDLREY 79
Query: 60 FIREEKDFIKVLFMKKEESESIKNSYK--------GIPIPEGILNEILENPFLFLEEYFE 111
+++F+++ F +K + + + N ++ GI N L + F ++E
Sbjct: 80 ATPTKEEFLEIFF-EKGDKKYLLNRFEINLKIFKFGIEEKFDFDNIKLNDVFSKMKESIN 138
Query: 112 EINNSGRIPVLILDELQVI------GDLRIDDLLIYKLFNFFVRLTKELHLAHVFVATSD 165
+ G+ P+LI+DELQ + G+ + D L+ +LFN FV LTK HL HV TSD
Sbjct: 139 AVIKDGKKPILIIDELQKLKSIYFNGEGKGDKSLLNELFNLFVHLTKVRHLCHVICLTSD 198
Query: 166 SLFLERVHGEAMLHGRSRFMLVDDFDERTTLEFLTSNGLSEEEAKIAWHYLGGKPSYLVD 225
+LF+E ++ + L S + L+D + + L G SEEE YL P +
Sbjct: 199 TLFIEEIYRNSTLENTSEYYLIDWLRKESIRNILKEEGFSEEEVDYCLKYL-SLPYEISQ 257
Query: 226 LLQRSR--IRVEDYCKEALKWRTSQILDSLYTLKGRKLRKVIELLSKFREN-----DEIT 278
L+ + + VE K+ + +IL + T K ++ K+I+ L F EI
Sbjct: 258 LINNKKLGLSVEQTIKQWINIERDKILYLISTQKEFEMGKLIDALKLFENKIKVDIKEII 317
Query: 279 YGPLSEEIVWSVRNNILFADPRERKLRPQGRLEKHAIELALE 320
L +E+ + ++N ILF D ++P + +AI+ +E
Sbjct: 318 RDNLMDEVKFLIKNEILFYDVMNGIIKPTSVKKWYAIKEVIE 359
>sp|Q58042|Y625_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0625 >gi|2128413|pir||A64378
hypothetical protein MJ0625 - Methanococcus jannaschii
>gi|1591336|gb|AAB98625.1| (U67510) M. jannaschii
predicted coding region MJ0625 [Methanococcus
jannaschii]
Length = 336
Score = 132 bits (330), Expect = 4e-30
Identities = 107/338 (31%), Positives = 169/338 (49%), Gaps = 23/338 (6%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFSKRLPREYIVF-NINLRGRF 60
F++REKEL L P+ I F YGP +SGK+T++ K L IVF NLR
Sbjct: 3 FYNREKELNYLKTYCQLDPNSILFVYGPKSSGKSTVMRRVIKELEDSNIVFFYYNLRKYA 62
Query: 61 IREEKDFIKVLFMKKEESESIKNSYKGIPIPEGILNEILENPFLFLEEYFEEINNS---- 116
+++F++V F K E+ + + + + + E + L L + F +IN S
Sbjct: 63 TYSKEEFLRVFFEKSEKKYLLNKLELNLGVFKFGVEENFDFNNLKLNDVFAKINESINAV 122
Query: 117 ---GRIPVLILDELQVIGDLRIDD--LLIYKLFNFFVRLTKELHLAHVFVATSDSLFLER 171
G+ PVLI+DELQ + ++ + L+ +LFN FV LTK HL HV TSD+LF+E
Sbjct: 123 VEDGKKPVLIIDELQKLKNIYFNGGKSLLNELFNLFVSLTKMEHLCHVICLTSDTLFIEE 182
Query: 172 VHGEAMLHGRSRFMLVDDFDERTTLEFLTSNGLSEEEAKIAWHYLGGKPSYLVDLLQRSR 231
++ + L S++ L+D + T L G SEEE YL P +VDL++ +
Sbjct: 183 IYQSSTLENTSKYYLIDWLRKGTIRNILKEEGFSEEEINYCLDYL-SLPYEIVDLIENKK 241
Query: 232 --IRVEDYCKEALKWRTSQI--LDSLYTLKGRKLRKVIELLSKFRENDEITYGP--LSEE 285
+ VE+ ++ + +I L L +L KV LSKF++ +I+Y EE
Sbjct: 242 LGLSVEETIRQWINIEKDKIKYLIDTTDLDEEELYKV---LSKFKDKIKISYEKEVKKEE 298
Query: 286 IVW---SVRNNILFADPRERKLRPQGRLEKHAIELALE 320
+ + ++N ILF D ++P + +AI L+
Sbjct: 299 MKYFKFLIKNEILFYDVINGIIKPTSVKKWYAIREILK 336
>gi|10954515 M. jannaschii predicted coding region MJECL26 [Methanococcus
jannaschii] >gi|2496258|sp|Q60285|YZ26_METJA
HYPOTHETICAL ATP-BINDING PROTEIN MJECL26
>gi|2129041|pir||A64513 hypothetical protein MJECL26 -
Methanococcus jannaschii plasmid pURB800
>gi|1522663|gb|AAC37097.1| (L77118) M. jannaschii
predicted coding region MJECL26 [Methanococcus
jannaschii]
Length = 343
Score = 131 bits (326), Expect = 1e-29
Identities = 102/334 (30%), Positives = 162/334 (47%), Gaps = 23/334 (6%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFSKRLPREYIVF-NINLRGRF 60
F+DREKEL L +P+ I F YGP +SGK+T++ K L IVF NLR
Sbjct: 7 FYDREKELNYLKTYCQLEPNSILFVYGPKSSGKSTVMRRVIKELENSNIVFFYYNLRKYA 66
Query: 61 IREEKDFIKVLFMKKEESESIKNSYKGIPIPEGILNEILENPFLFLEEYFEEINNS---- 116
+F++V F K ++ + + + + + E + L L + F +IN S
Sbjct: 67 TPTRDEFLRVFFEKSDKKYLLNKLELNLGVCKFGIEENFDFNNLCLNDVFAKINESINAV 126
Query: 117 ---GRIPVLILDELQVIGDLRIDD--LLIYKLFNFFVRLTKELHLAHVFVATSDSLFLER 171
G+ PVLI+DELQ + ++ + L+ +LFN FV LTK HL HV TSD+LF++
Sbjct: 127 VEEGKKPVLIIDELQKLKNIYFNGGKSLLNELFNLFVSLTKMEHLCHVICLTSDTLFIDE 186
Query: 172 VHGEAMLHGRSRFMLVDDFDERTTLEFLTSNGLSEEEAKIAWHYLGGKPSYLVDLLQRSR 231
++ + L S + L+D + T L G SEEE A YL P + L+ +
Sbjct: 187 IYRNSTLKNASEYYLIDWLRKGTIRNILKEEGFSEEEINYALDYL-SLPYEISQLINNKK 245
Query: 232 --IRVEDYCKEALKWRTSQILDSLYTLKGRKLRK--VIELLSKFRENDEITYGPLSEE-- 285
+ VE K+ W + Y + L + + +LSKF++ +I+Y ++
Sbjct: 246 LGLSVEQTIKQ---WINVEKDGLKYLIDTTDLDEEGLYNVLSKFKDKIKISYDKEVKKEE 302
Query: 286 ---IVWSVRNNILFADPRERKLRPQGRLEKHAIE 316
+ + + N ILF D ++P +E HAI+
Sbjct: 303 MKYLKFLIENEILFYDVINGIIKPTSIIEWHAIK 336
>sp|Q58476|YA76_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1076 >gi|2128655|pir||C64434
hypothetical protein MJ1076 - Methanococcus jannaschii
>gi|1591724|gb|AAB99081.1| (U67550) M. jannaschii
predicted coding region MJ1076 [Methanococcus
jannaschii]
Length = 337
Score = 125 bits (310), Expect = 9e-28
Identities = 99/339 (29%), Positives = 168/339 (49%), Gaps = 23/339 (6%)
Query: 2 FFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFSKRLPREYIVF-NINLRGRF 60
F++REKEL L + V +P+ I F YGP +SGK+T+++ K L IVF NLR
Sbjct: 3 FYNREKELNYLKNYVQLEPNSILFVYGPKSSGKSTVMMRVIKELENSNIVFFYYNLRKYA 62
Query: 61 IREEKDFIKVLFMKKEESESIKNSYKGIPIPEGILNEILENPFLFLEEYFEEINNS---- 116
+ +F+ + F K ++ + + I + + E + + L + F +IN S
Sbjct: 63 TPTKDEFLSIFFEKSDKKYLLNKLEINLKIFKFGIEENFDFNNIKLNDVFAKINESINTV 122
Query: 117 ---GRIPVLILDELQVIGDLRIDD--LLIYKLFNFFVRLTKELHLAHVFVATSDSLFLER 171
G+ PVL++DELQ + ++ + L+ +LFN FV LTK HL HV TSD+LF++
Sbjct: 123 IKDGKRPVLVIDELQKLKNIYFNSGKSLLNELFNLFVSLTKMEHLCHVICLTSDTLFIDN 182
Query: 172 VHGEAMLHGRSRFMLVDDFDERTTLEFLTSNGLSEEEAKIAWHYLGGKPSYLVDLLQRSR 231
V+ + L S + L+D + + L G +++E +YL P + L+ +
Sbjct: 183 VYRNSSLSEASEYYLIDWLKKDDIKKILKEEGFNKKEIDYCLNYL-SLPYEISQLINNKK 241
Query: 232 --IRVEDYCKEALKWRTSQILDSLYTLKGRKL--RKVIELLSKFRENDEITY--GPLSEE 285
+ VE+ K +W + Y + L ++ ++LSKF++ +I Y EE
Sbjct: 242 LGLSVEETIK---RWINIEADGIKYLIDTSDLNEEEIYKVLSKFKDKIKINYKKDVKKEE 298
Query: 286 ---IVWSVRNNILFADPRERKLRPQGRLEKHAIELALEK 321
I + + N ILF D ++P + +AI+ L+K
Sbjct: 299 MKYIKFLIENEILFYDVINGIIKPTSVKKWYAIKEILDK 337
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.142 0.403
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119399080
Number of Sequences: 2977
Number of extensions: 5120098
Number of successful extensions: 15102
Number of sequences better than 1.0e-10: 20
Number of HSP's better than 0.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 15003
Number of HSP's gapped (non-prelim): 21
length of query: 326
length of database: 189,106,746
effective HSP length: 55
effective length of query: 271
effective length of database: 156,189,961
effective search space: 42327479431
effective search space used: 42327479431
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 165 (68.7 bits)