BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB0811 (rad32) DE:DNA REPAIR PROTEIN RAD32 (RAD32)
         (423 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||E75103 DNA repair protein rad32 (rad32) PAB0811 - Pyrococcu...   873  0.0
pir||D71083 probable phosphoesterase (EC 3.1.-.-) PHAR032 - Pyro...   628  e-179
gi|11498636 DNA repair protein RAD32 (rad32) [Archaeoglobus fulg...   246  3e-64
gb|AAK42418.1| DNA repair protein (rad32/mre11) [Sulfolobus solf...   118  1e-25
pir||B64465 probable phosphoesterase (EC 3.1.-.-) MJ1323 - Metha...   116  6e-25
pir||E69171 conserved hypothetical protein MTH541 - Methanobacte...   104  2e-21
emb|CAC11305.1| (AL445063) conserved hypothetical protein [Therm...    80  4e-14
pir||E70462 ATP-dependent dsDNA exonuclease (EC 3.1.-.-) - Aquif...    79  1e-13
gb|AAG19044.1| (AE005003) phosphoesterase; Ppe [Halobacterium sp...    77  4e-13

>pir||E75103 DNA repair protein rad32 (rad32) PAB0811 - Pyrococcus abyssi
           (strain Orsay) >gi|5458642|emb|CAB50130.1| (AJ248286)
           DNA REPAIR PROTEIN RAD32 (RAD32) [Pyrococcus abyssi]
           Length = 423
           
 Score =  873 bits (2230), Expect = 0.0
 Identities = 423/423 (100%), Positives = 423/423 (100%)

Query: 1   MWTSEVFVMGIKFAHLADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDL 60
           MWTSEVFVMGIKFAHLADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDL
Sbjct: 1   MWTSEVFVMGIKFAHLADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDL 60

Query: 61  FNSSRPSPGTIKTAVKILQIPRDNNIPVFAIEGNHDRTQRGPSILHLLEDLGLLYVLGVR 120
           FNSSRPSPGTIKTAVKILQIPRDNNIPVFAIEGNHDRTQRGPSILHLLEDLGLLYVLGVR
Sbjct: 61  FNSSRPSPGTIKTAVKILQIPRDNNIPVFAIEGNHDRTQRGPSILHLLEDLGLLYVLGVR 120

Query: 121 DEKVENEYLTSEKTKAGWLVKGMYKDVEIHGMKYMSAAWFEGNIELFKSMFRPEGDAILV 180
           DEKVENEYLTSEKTKAGWLVKGMYKDVEIHGMKYMSAAWFEGNIELFKSMFRPEGDAILV
Sbjct: 121 DEKVENEYLTSEKTKAGWLVKGMYKDVEIHGMKYMSAAWFEGNIELFKSMFRPEGDAILV 180

Query: 181 LHQGVREITENNYPNYSSELSLSDLPKGYLYYALGHIHKRFELTYDDAPVVYPGSLERWD 240
           LHQGVREITENNYPNYSSELSLSDLPKGYLYYALGHIHKRFELTYDDAPVVYPGSLERWD
Sbjct: 181 LHQGVREITENNYPNYSSELSLSDLPKGYLYYALGHIHKRFELTYDDAPVVYPGSLERWD 240

Query: 241 FGDYSLKLTWNGFQFKEEVGVDKGFYIVEDFKPRFIRINARDFIDVHIKGHSENEIKKAV 300
           FGDYSLKLTWNGFQFKEEVGVDKGFYIVEDFKPRFIRINARDFIDVHIKGHSENEIKKAV
Sbjct: 241 FGDYSLKLTWNGFQFKEEVGVDKGFYIVEDFKPRFIRINARDFIDVHIKGHSENEIKKAV 300

Query: 301 KLAVPKIPRNSYVRFNIRWKRPVDVDWIKSIVNAEYVRVNPIIIKEERGPDGKDLDVKKF 360
           KLAVPKIPRNSYVRFNIRWKRPVDVDWIKSIVNAEYVRVNPIIIKEERGPDGKDLDVKKF
Sbjct: 301 KLAVPKIPRNSYVRFNIRWKRPVDVDWIKSIVNAEYVRVNPIIIKEERGPDGKDLDVKKF 360

Query: 361 FTELEWKIIELASEKEYEYYLNQIIDLLASEEGKVEAKIDAKREEKKFVRPKNPGDIMAW 420
           FTELEWKIIELASEKEYEYYLNQIIDLLASEEGKVEAKIDAKREEKKFVRPKNPGDIMAW
Sbjct: 361 FTELEWKIIELASEKEYEYYLNQIIDLLASEEGKVEAKIDAKREEKKFVRPKNPGDIMAW 420

Query: 421 VKG 423
           VKG
Sbjct: 421 VKG 423


>pir||D71083 probable phosphoesterase (EC 3.1.-.-) PHAR032 - Pyrococcus
           horikoshii >gi|3257343|dbj|BAA30026.1| (AP000004) 413aa
           long hypothetical protein [Pyrococcus horikoshii]
           Length = 413
           
 Score =  628 bits (1603), Expect = e-179
 Identities = 289/415 (69%), Positives = 352/415 (84%), Gaps = 5/415 (1%)

Query: 11  IKFAHLADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDLFNSSRPSPGT 70
           +KFAHLADVHLGYEQFN+ QRAEEFA  F+ A+++CV E VDFI+IAGDLFNSSRPSPGT
Sbjct: 1   MKFAHLADVHLGYEQFNKPQRAEEFANTFKKALEMCVKESVDFIIIAGDLFNSSRPSPGT 60

Query: 71  IKTAVKILQIPRDNNIPVFAIEGNHDRTQRGPSILHLLEDLGLLYVLGVRDEKVENEYLT 130
           IKTA+K+LQIP++NNIPVFAIEGNHDRTQRGPS+LHLLEDLGLLYV+G+R E+VENEYLT
Sbjct: 61  IKTAIKLLQIPKENNIPVFAIEGNHDRTQRGPSVLHLLEDLGLLYVIGLRQERVENEYLT 120

Query: 131 SEKTKAGWLVKGMYKDVEIHGMKYMSAAWFEGNIELFKSMFRPEGDAILVLHQGVREITE 190
           SE+    WLVKG+Y ++EIHGMKYMS+AWFE N+  FK +FRP+ DAILVLHQG+R+ITE
Sbjct: 121 SERVGNYWLVKGVYDNLEIHGMKYMSSAWFEANLNFFKGIFRPDEDAILVLHQGIRDITE 180

Query: 191 NNYPNYSSELSLSDLPKGYLYYALGHIHKRFELTYDDAPVVYPGSLERWDFGDYSLKLTW 250
             +P+YS+EL LSDLP+GYLYYALGH+HKRFE  Y D+PVVYPGSLERWDFGDY+ +L W
Sbjct: 181 KVFPSYSAELKLSDLPRGYLYYALGHVHKRFETNYGDSPVVYPGSLERWDFGDYAKRLVW 240

Query: 251 NGFQFKEEVGVDKGFYIVEDFKPRFIRINARDFIDVHIKGHSENEIKKAVKLAVPKIPRN 310
           NG  F+EEVG DKGFYIVEDF PRF+ I  RDFIDV IKG SE EIKKAVK ++P IPRN
Sbjct: 241 NGVTFREEVGSDKGFYIVEDFTPRFVNIKVRDFIDVVIKGDSEREIKKAVKASLPHIPRN 300

Query: 311 SYVRFNIRWKRPVDVDWIKSIVNAEYVRVNPIIIKEERGPDGKDLDVKKFFTELEWKIIE 370
           SYVRFNI+W++P DV+WIK IVNAEY+R++  IIK+E+  +G+ +D+K FFTE EWK+I+
Sbjct: 301 SYVRFNIKWRKPFDVEWIKEIVNAEYLRIHTAIIKDEKSMNGESVDIKSFFTEQEWKVID 360

Query: 371 LASEKEYEYYLNQIIDLLASEEGKVEAKIDAKREEK--KFVRPKNPGDIMAWVKG 423
           LAS  E+E Y+ +I+D+L+  E K E +   K+E K  KF RPKNPGD+ AW++G
Sbjct: 361 LASSDEFESYIEKIVDILSGYEKKEERE---KKESKIRKFERPKNPGDLTAWLRG 412


>gi|11498636 DNA repair protein RAD32 (rad32) [Archaeoglobus fulgidus]
           >gi|7428119|pir||G69378 probable phosphoesterase (EC
           3.1.-.-) AF1031 - Archaeoglobus fulgidus
           >gi|2649563|gb|AAB90212.1| (AE001032) DNA repair protein
           RAD32 (rad32) [Archaeoglobus fulgidus]
           Length = 443
           
 Score =  246 bits (622), Expect = 3e-64
 Identities = 157/411 (38%), Positives = 237/411 (57%), Gaps = 28/411 (6%)

Query: 11  IKFAHLADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDLFNSSRPSPGT 70
           +KFAH+ADVHLGYEQ+N+  RAE+FAKAF+   +  V+   DF+VIAGDLF+ S PSP T
Sbjct: 1   MKFAHIADVHLGYEQYNQPWRAEDFAKAFKVIAEKAVESNADFVVIAGDLFHRSLPSPRT 60

Query: 71  IKTAVKILQIPRDNNIPVFAIEGNHDRTQRGPSILHLLEDLGLLYVLGVRDEKVENEYLT 130
           IK AV+ L + R  NIPVFA+EGNHD+T R  S  HLLE LGLL VLG+R   V  E + 
Sbjct: 61  IKEAVETLWMFRKENIPVFAVEGNHDKTSRDISAYHLLESLGLLNVLGLRRNPVRGENVE 120

Query: 131 SEKTKAGWLVKGMYKDVEIHGMKYMSAAWFEGNIELFKSMFRPEGD-AILVLHQGVREIT 189
           S + +  +LVKG+  DVEI G ++ S    +  +E    + +P+ D ++LVLHQ V+E+ 
Sbjct: 121 SLRIQNVYLVKGVVDDVEILGDRHRS----KWQLEKVLPLLKPQSDKSVLVLHQAVKEVV 176

Query: 190 ENNYPNYSSELSLSDLPKGYLYYALGHIHKRFELTYDDAPVVYPGSLERWDFGDYSLKLT 249
           + +  + + EL+++DLP+   YYA GHIH      +D   + YPGS+ER+D  + S K+ 
Sbjct: 177 DIDL-DMAYELTINDLPEA-SYYAFGHIHLPKIYEFDGKAIAYPGSVERYDLREAS-KIV 233

Query: 250 WNGFQFKEEVGVDKGFYIVEDFKPRFIRINARDFIDVHIKGHSENEIKKAVKLAVPKIPR 309
               +   + G+ KGF +V++F+P F+ I  R+  DV I+  S   ++K     + +  +
Sbjct: 234 RYRDELVLKDGIRKGFILVKNFRPEFVEIETRELYDVEIEDESVEGLEKKFLEVLGRADK 293

Query: 310 NSYVRFNIRWKRPVDVDWIKSIV--NAEYVRVNPIIIKEERGPDGKDLDVK---KFFTEL 364
              +   ++    VDV  +  +      Y  +    I EE     +++++K   +FFTE 
Sbjct: 294 EGIMVAKLKSSDAVDVRRLSEVAAKRVRYAEIRFERILEEI----EEVEIKQESEFFTEF 349

Query: 365 EWKIIEL----ASEKE-----YEYYLNQIIDLLASEEGKVEAKIDAKREEK 406
           E K++EL      E E      E+YL+     L  EEG  E  ++ + E+K
Sbjct: 350 ELKLLELLRGEMDEDEVYSLVVEHYLSG--GALKQEEGAEERVVEEETEKK 398


>gb|AAK42418.1| DNA repair protein (rad32/mre11) [Sulfolobus solfataricus]
           Length = 381
           
 Score =  118 bits (293), Expect = 1e-25
 Identities = 69/223 (30%), Positives = 118/223 (51%), Gaps = 24/223 (10%)

Query: 11  IKFAHLADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDLFNSSRPSPGT 70
           ++  H++D HLG  Q++  +R ++    F   + I + E VD I+ +GDLF+ S P+   
Sbjct: 2   VQILHISDTHLGKRQYSLVEREKDIYDIFSQLVDIAIKEHVDVIIHSGDLFDVSSPTTNA 61

Query: 71  IKTAVKILQIPRDNNIPVFAIEGNHDRTQRGPSIL--HLLEDLGLLYVLGVRDEKVENEY 128
           +  A+KIL+  +D NIP  +I G+HD  +R   ++  ++L +L L+ +L       E  Y
Sbjct: 62  LVMAIKILKRLKDVNIPFLSIPGDHDTPKRKGYLIPHNILSELDLIKIL-----NYEKPY 116

Query: 129 LTSEKTKAGWLVKGMYKDVEIHGMKYMSAAWFEGNIELFKSMFRPEGDAILVLHQGVREI 188
           +               K +E++G+ ++        +    ++      +IL+LHQGV++I
Sbjct: 117 I--------------IKGIEVYGIPHIPTVSKSILVSALSALRPKSSRSILLLHQGVKQI 162

Query: 189 TENNYPNYSSELSLSDLPKGYLYYALGHIHKRFELTYDDAPVV 231
                 + S ++ L  LPKG+ YYALGHIH R+ LT DD  V+
Sbjct: 163 LPY---DGSWQMELGSLPKGFGYYALGHIHTRWRLTQDDGSVI 202


>pir||B64465 probable phosphoesterase (EC 3.1.-.-) MJ1323 - Methanococcus
           jannaschii >gi|1591963|gb|AAB99332.1| (U67572) DNA
           repair protein RAD32 (rad32) [Methanococcus jannaschii]
           Length = 366
           
 Score =  116 bits (287), Expect = 6e-25
 Identities = 101/305 (33%), Positives = 148/305 (48%), Gaps = 46/305 (15%)

Query: 13  FAHLADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDLFNSSRPSPGTIK 72
           F H+AD HLGY Q+N   R ++   +F+  IK  ++ K D ++ +GDLFN  RP    ++
Sbjct: 3   FVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALR 62

Query: 73  TAVKILQIPRDNNIPVFAIEGNHDRTQR--GPSILHLLEDLGLLYVLGVRDEKVENEYLT 130
            A++  +   +NNI V+ + GNH+  +R    S L LL+D    YV  +  + V N    
Sbjct: 63  IAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKD----YVKILDGKDVIN---- 114

Query: 131 SEKTKAGWLVKGMYKDVEIHGMKYMSAAWFE---GNIELFKSMFRPEGDAILVLHQGVRE 187
                    V G  +++ I G  Y   +  E     ++ F+S  +     IL+LHQG+  
Sbjct: 115 ---------VNG--EEIFICGTYYHKKSKREEMLDKLKNFESEAKNYKKKILMLHQGI-- 161

Query: 188 ITENNYPNYSSELSLSDLPKGYLYYALGHIHKRFELTYDDAPVVYPGSLE---RWDFGDY 244
              N Y     EL   DLPK + YYALGHIHKR    ++D  + Y GS E   R ++ DY
Sbjct: 162 ---NPYIPLDYELEHFDLPK-FSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEYEDY 217

Query: 245 SLKLTWNGFQFKEEVGVDKGFYIVEDFKPRFIRINARDFIDVHIKGHSENEIKKAVKLAV 304
             K    GF   +  G D     +E      I I  R+F++V+IK       KK+   AV
Sbjct: 218 --KKEGKGFYLVDFSGNDLDISDIEK-----IDIECREFVEVNIKD------KKSFNEAV 264

Query: 305 PKIPR 309
            KI R
Sbjct: 265 NKIER 269


>pir||E69171 conserved hypothetical protein MTH541 - Methanobacterium
           thermoautotrophicum (strain Delta H)
           >gi|2621616|gb|AAB85047.1| (AE000837) Rad32 related
           protein [Methanobacterium thermoautotrophicum]
           Length = 587
           
 Score =  104 bits (258), Expect = 2e-21
 Identities = 85/297 (28%), Positives = 147/297 (48%), Gaps = 39/297 (13%)

Query: 12  KFAHLADVHLGYEQFN--RSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDLFNSSRPSPG 69
           +FAHL+D HLG ++    R    E F  A +DA++    + VDF++IAGDLF+S+ P+  
Sbjct: 172 RFAHLSDCHLGAQKHPDLRELEFEAFRMALDDALQ----KDVDFMIIAGDLFHSNIPNME 227

Query: 70  TIKTAVKILQIPRDNNIPVFAIEGNHDRTQRGPSILHLLEDLGLL--YVLGVRDEKVENE 127
           T+K A   L+  R+  +P++   G+HD +    S++ +LE  G++   V  +  +K+  E
Sbjct: 228 TVKRATLELRRVREAGVPIYVNYGSHDYSPSSTSMIDILESAGVIDKVVRPIPGKKLGLE 287

Query: 128 YLTSEKTKAGWLVKGMYKDVEIHGMKYMSAAWFEGNIELFKSMFRPEGDAILVLHQGVRE 187
           +   EKT A        K   + G      A +   ++  +++   +G  I + H  + +
Sbjct: 288 FTVDEKTGA--------KITGLSGRSRTLEAEYFMKLDR-EALEAEDGFRIFLFHSAITQ 338

Query: 188 ITENNYPNYSSELSLSDLPKGYLYYALGHIHKR---FELTYDDAPVVYPGSLERWDFGDY 244
               +  +  S + L+  P+G+ YYA GH+H++    E  Y   P+VYPG+L    FG Y
Sbjct: 339 FKPVDLADMES-VDLNLFPRGFEYYAGGHVHRKGCYIEEGY--GPIVYPGTL----FGSY 391

Query: 245 SLKLTWNGFQFKEEVGVDKGFYIVE----DFKPRFIRINARDF--IDVHIKGHSENE 295
           +  L  N        G  +G+Y+VE      +P F  I   +F  I+  + G +  +
Sbjct: 392 AGDLEENA------RGETRGYYLVEFTDRAREPEFREIRPAEFEYIECDVTGKNSQD 442


>emb|CAC11305.1| (AL445063) conserved hypothetical protein [Thermoplasma
           acidophilum]
           Length = 376
           
 Score = 80.4 bits (195), Expect = 4e-14
 Identities = 60/223 (26%), Positives = 97/223 (42%), Gaps = 15/223 (6%)

Query: 15  HLADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDLFNSSRPSPGTIKTA 74
           H +D H+GY      +R ++F  AF +AI I ++  VDF++  GDLF++  P    I+  
Sbjct: 2   HFSDTHIGYRSLTLDEREQDFYDAFHEAIDIALENSVDFVIHTGDLFDTWVPGNRAIREF 61

Query: 75  VKILQIPRDNNIPVFAIEGNHDRTQRGPSILHLLEDLGLLYVLGVRDEKVENEYLTSEKT 134
              +      NIP+F I G+HDR +R       + D   ++VLG        EY   +  
Sbjct: 62  RNAVMKLNARNIPIFVIFGDHDRPRRNGEPAAGIFDFMGVHVLGWD----AYEYAVRKFD 117

Query: 135 KAGWLVKGMYKDVEIHGMKYMSAAWFEGNIELFKSMFRPEGDAILVLHQGVREITENNYP 194
               L+ G      I  MK       +   +  +++     + IL+ HQ +    +  + 
Sbjct: 118 GEDVLIGG------ISNMKGYMKTRLKDEYKRSENIEEGYRNRILMSHQAI----DPFFV 167

Query: 195 NYSSELSLSDLPKGYLYYALGHIHKRFELTYDDAPVVYPGSLE 237
               E  + DLP  + Y A+GH+H   E       + Y GS E
Sbjct: 168 PDQCEAKMDDLPMNFSYIAMGHLHDFMERRIGPL-ISYAGSTE 209


>pir||E70462 ATP-dependent dsDNA exonuclease (EC 3.1.-.-) - Aquifex aeolicus
           >gi|2984155|gb|AAC07689.1| (AE000761) ATP-dependent
           dsDNA exonuclease [Aquifex aeolicus]
           Length = 379
           
 Score = 78.8 bits (191), Expect = 1e-13
 Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 19/258 (7%)

Query: 11  IKFAHLADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDLFNSSRPSPGT 70
           ++  HL+D+H G +   R  R E+   A    +  C + K D +++AGD+F+ + P    
Sbjct: 1   MRLIHLSDIHAG-KNLGRVSRNEDVVYALNQVVDFCKENKPDLVLVAGDVFDKANPDNEA 59

Query: 71  IKTAVKILQIPRDNNIPVFAIEGNHDRTQRGPSILHLLEDLGLLYV---------LGVRD 121
            +            NIP   I GNHD  +   S+  LL+ + +  V         L V+ 
Sbjct: 60  KEIIFDFFLKLHSLNIPSVVISGNHDSYEFMKSLKKLLQVIDVYVVPKPNLEECVLDVKG 119

Query: 122 EKVENEYLTSEK--TKAGWLVKGMYKDVEIHGMKYMSAAWFEGNIELFKSMFRPEGDAIL 179
            K+      SE+  T+AG   K  Y  +    +KY+     +  +++  S     G    
Sbjct: 120 LKIACLPYPSERVLTRAGEDSKLSYAVLVEKAIKYLYEKVKDAPLKVLLSHLFIAGSKYT 179

Query: 180 VLHQGVREITENNYPNYSSELSLSDLPKGYLYYALGHIHKRFELTYDDAPVVYPGSLERW 239
              +  RE T  +Y  Y+ E S   +P+G+ Y ALGH+H+   +      V Y GSL + 
Sbjct: 180 ---RTEREATITDY--YAVEPSA--IPEGFDYVALGHVHRYQRIEKAPTHVYYTGSLFQL 232

Query: 240 DFGDYSLKLTWNGFQFKE 257
           DF +   +  +N  + KE
Sbjct: 233 DFSEAGQEKFFNFVELKE 250


>gb|AAG19044.1| (AE005003) phosphoesterase; Ppe [Halobacterium sp. NRC-1]
           Length = 387
           
 Score = 76.9 bits (186), Expect = 4e-13
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 1/99 (1%)

Query: 15  HLADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDLFNSSRPSPGTIKTA 74
           H  D HLGY+Q++  QR ++F  AF+  I   +DE VD +V AGDL++  +P    I   
Sbjct: 6   HTGDTHLGYQQYHAPQRRQDFLDAFDAVITDAIDEGVDAVVHAGDLYHDRQPGLRDILDT 65

Query: 75  VKILQIPRDNNIPVFAIEGNHDRTQRGPSILHLLEDLGL 113
           + +L+  +D +IP  A+ GNH+ T R    L L E LGL
Sbjct: 66  IALLRPLQDADIPFLAVVGNHEGT-RDAQWLDLFETLGL 103


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.320    0.140    0.420 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169020784
Number of Sequences: 2977
Number of extensions: 7578935
Number of successful extensions: 16159
Number of sequences better than 1.0e-10: 9
Number of HSP's better than  0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 16138
Number of HSP's gapped (non-prelim): 10
length of query: 423
length of database: 189,106,746
effective HSP length: 54
effective length of query: 369
effective length of database: 156,788,448
effective search space: 57854937312
effective search space used: 57854937312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 166 (69.1 bits)