BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0825 (PAB0825) DE:TRANSLATION INITIATION INHIBITOR,
PUTATIVE.
(127 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75032 probable translation initiation inhibitor PAB0825 - ... 250 4e-66
sp|O58584|Y854_PYRHO HYPOTHETICAL PROTEIN PH0854 >gi|7444996|pir... 227 3e-59
gb|AAK43303.1| Protein synthesis inhibitor, putative [Sulfolobus... 172 1e-42
pir||A72404 hypothetical protein TM0215 - Thermotoga maritima (s... 161 2e-39
dbj|BAB03782.1| (AP001507) translation initiation inhibitor [Bac... 146 8e-35
sp|P37552|YABJ_BACSU PUTATIVE REGULATOR OF PURINE BIOSYNTHESIS >... 142 1e-33
pdb|1QD9|A Chain A, Bacillus Subtilis Yabj >gi|6573366|pdb|1QD9|... 142 1e-33
pir||F72630 hypothetical protein APE1501 - Aeropyrum pernix (str... 139 8e-33
sp|O25598|Y944_HELPY HYPOTHETICAL PROTEIN HP0944 >gi|7429318|pir... 136 7e-32
sp|Q9ZKQ6|Y944_HELPJ HYPOTHETICAL PROTEIN HP0944/JHP0879 >gi|744... 136 7e-32
sp|P44839|YJGF_HAEIN HYPOTHETICAL PROTEIN HI0719 >gi|1074492|pir... 136 9e-32
sp|P52761|Y709_SYNY3 HYPOTHETICAL 13.8 KD PROTEIN SLR0709 >gi|13... 135 2e-31
pir||A82979 conserved hypothetical protein PA5339 [imported] - P... 134 3e-31
pir||B44514 hypothetical protein 1 (vnfA 5' region) - Azotobacte... 133 6e-31
sp|O52178|DFRA_MYXXA DFRA PROTEIN >gi|2736191|gb|AAB97678.1| (AF... 133 6e-31
gb|AAF24094.1| (AF118109) Brt1 [Schizophyllum commune] 133 8e-31
pir||F65100 hypothetical 16.3 kD protein in exuR-tdcC intergenic... 132 1e-30
sp|P42631|TDCF_ECOLI TDCF PROTEIN 132 1e-30
gb|AAF68409.1|AF237923_1 (AF237923) conserved hypothetical prote... 132 1e-30
pir||B82067 conserved hypothetical protein VC2512 [imported] - V... 131 2e-30
pir||S56469 hypothetical 13.5K protein (mgtA-pyrI intergenic reg... 131 4e-30
sp|P39330|YJGF_ECOLI 13.5 KD PROTEIN IN MGTA-PYRI INTERGENIC REGION 131 4e-30
pdb|1QU9|A Chain A, 1.2 A Crystal Structure Of Yjgf Gene Product... 131 4e-30
gb|AAD22768.1|AF095578_1 (AF095578) YjgF [Salmonella typhimurium] 130 7e-30
sp|P40431|YVN1_AZOVI HYPOTHETICAL 13.5 KD PROTEIN IN VNFA 5'REGI... 128 3e-29
sp|O66689|Y364_AQUAE HYPOTHETICAL PROTEIN AQ_364 >gi|7444997|pir... 127 4e-29
pir||G75265 probable protein translation inhibitor - Deinococcus... 127 6e-29
gi|6680277 heat-responsive protein 12 [Mus musculus] >gi|1708292... 126 1e-28
pir||B82817 translation initiation inhibitor XF0353 [imported] -... 125 2e-28
gb|AAC72281.1| (AF000167) 14.3 kDa perchloric acid soluble prote... 123 7e-28
pir||F81174 ribonuclease, probable NMB0662 [imported] - Neisseri... 123 7e-28
gi|5032215 translational inhibitor protein p14.5 [Homo sapiens] ... 123 7e-28
pir||A81932 hypothetical protein NMA0861 [imported] - Neisseria ... 122 1e-27
pir||A81284 hypothetical protein Cj1388 [imported] - Campylobact... 121 3e-27
dbj|BAB02821.1| (AB024036) contains similarity to protein transl... 121 3e-27
sp|P52759|UK14_RAT 14.5 KD TRANSLATIONAL INHIBITOR PROTEIN (PERC... 121 3e-27
sp|P55654|Y4SK_RHISN HYPOTHETICAL 13.3 KD PROTEIN Y4SK >gi|21826... 121 3e-27
pir||S74181 tumor antigen UK114 - goat 119 1e-26
gb|AAB70815.1| (AF015949) perchloric acid soluble protein [Rattu... 119 1e-26
sp|Q10121|YSD2_CAEEL HYPOTHETICAL 19.6 KD PROTEIN C23G10.2 IN CH... 118 2e-26
gb|AAG20243.1| (AE005099) Vng2099c [Halobacterium sp. NRC-1] 118 3e-26
sp|P57452|Y371_BUCAI HYPOTHETICAL PROTEIN BU371 >gi|10039041|dbj... 117 5e-26
sp|P80601|UK14_CAPHI 14.5 KD TRANSLATIONAL INHIBITOR PROTEIN (UK... 116 8e-26
sp|P97117|Y142_LEUMC HYPOTHETICAL 14.2 KD PROTEIN >gi|1857050|gb... 116 1e-25
gi|6320899 heat-regulated protein; Hig1p [Saccharomyces cerevisi... 115 2e-25
sp|O34133|ALDR_LACLA PUTATIVE REGULATOR ALDR >gi|2565162|gb|AAB8... 112 2e-24
gb|AAF44934.1|AE003406_139 (AE003416) symbol=BG:DS07851.3; cDNA=... 111 3e-24
gi|6322138 Mmd1p [Saccharomyces cerevisiae] >gi|731809|sp|P40185... 109 8e-24
sp|O43003|YB94_SCHPO HYPOTHETICAL 17.5 KD PROTEIN IN CHROMOSOME ... 101 4e-21
pir||T50060 probable translation initiation inhibitor [imported]... 97 8e-20
emb|CAC16451.1| (AL450165) conserved hypothetical protein [Strep... 93 1e-18
dbj|BAB03536.1| (AB020521) AmnE [Pseudomonas sp.] 90 8e-18
pir||S30349 perchloric acid-soluble protein, 23K - rat >gi|44567... 89 2e-17
pir||A83256 conserved hypothetical protein PA3123 [imported] - P... 88 3e-17
sp|P75896|YCDK_ECOLI HYPOTHETICAL 13.8 KD PROTEIN IN WRBA-PUTA I... 83 1e-15
gb|AAF03490.1| (U93363) YjgF-like protein [Pseudomonas pseudoalc... 79 2e-14
pir||T35965 conserved hypothetical protein SC9C7.14c - Streptomy... 68 5e-11
gi|11424938 translational inhibitor protein p14.5 [Homo sapiens] 67 7e-11
pir||C70531 hypothetical protein Rv2704 - Mycobacterium tubercul... 67 9e-11
pir||A75567 conserved hypothetical protein - Deinococcus radiodu... 67 9e-11
>pir||G75032 probable translation initiation inhibitor PAB0825 - Pyrococcus
abyssi (strain Orsay) >gi|5458669|emb|CAB50156.1|
(AJ248287) TRANSLATION INITIATION INHIBITOR, PUTATIVE.
[Pyrococcus abyssi]
Length = 127
Score = 250 bits (632), Expect = 4e-66
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK 60
MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK
Sbjct: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK 60
Query: 61 AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEM 120
AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEM
Sbjct: 61 AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEM 120
Query: 121 EAIAYKE 127
EAIAYKE
Sbjct: 121 EAIAYKE 127
>sp|O58584|Y854_PYRHO HYPOTHETICAL PROTEIN PH0854 >gi|7444996|pir||B71136 hypothetical
protein PH0854 - Pyrococcus horikoshii
>gi|3257265|dbj|BAA29948.1| (AP000003) 137aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 137
Score = 227 bits (573), Expect = 3e-59
Identities = 110/125 (88%), Positives = 121/125 (96%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
KEVIFTE APKPIGPYSQAIK GNF+F+AGQIPIDP+TGEIVKGDIK+QT++V+ENIKAI
Sbjct: 13 KEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKDQTRQVLENIKAI 72
Query: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEA 122
LE AG SLNDV+KVTVYLKD+NDFAKMNEVY+EYFGESKPARVAVEVSRLPKDVLIE+EA
Sbjct: 73 LEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAEYFGESKPARVAVEVSRLPKDVLIEIEA 132
Query: 123 IAYKE 127
IAYKE
Sbjct: 133 IAYKE 137
>gb|AAK43303.1| Protein synthesis inhibitor, putative [Sulfolobus solfataricus]
Length = 126
Score = 172 bits (432), Expect = 1e-42
Identities = 83/124 (66%), Positives = 101/124 (80%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
KE+IFTEKAPKPIGPYSQ +KVG+ ++V+GQIP+DP+T E+V +I+EQT RVIENIKA+
Sbjct: 2 KEIIFTEKAPKPIGPYSQGVKVGDILYVSGQIPVDPKTNEVVGKNIEEQTIRVIENIKAV 61
Query: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEA 122
LE AG L+DVV VYLKD+ DF + NEVYS+YF PARV VEVSRLP+DVLIE+
Sbjct: 62 LEAAGYMLDDVVMSFVYLKDIKDFQRFNEVYSKYFSNKPPARVTVEVSRLPRDVLIEITV 121
Query: 123 IAYK 126
IA K
Sbjct: 122 IAQK 125
>pir||A72404 hypothetical protein TM0215 - Thermotoga maritima (strain MSB8)
>gi|4980713|gb|AAD35307.1|AE001706_6 (AE001706) protein
synthesis inhibitor, putative [Thermotoga maritima]
Length = 128
Score = 161 bits (404), Expect = 2e-39
Identities = 78/125 (62%), Positives = 102/125 (81%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
K + T+KAPK IGPYSQA+ VGN +FV+GQIPIDPETGE+V+G I+E+T+RV+EN+KAI
Sbjct: 2 KRFVETDKAPKAIGPYSQAVVVGNMMFVSGQIPIDPETGELVQGTIEEKTERVLENLKAI 61
Query: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEA 122
LE G SL DVVKVTV+ ++ F ++NEVYS YFG+ +PAR V V++LP++V IE+EA
Sbjct: 62 LEAGGFSLKDVVKVTVFTTSMDYFQRVNEVYSRYFGDHRPARSFVAVAQLPRNVEIEIEA 121
Query: 123 IAYKE 127
IA KE
Sbjct: 122 IAVKE 126
>dbj|BAB03782.1| (AP001507) translation initiation inhibitor [Bacillus halodurans]
Length = 124
Score = 146 bits (365), Expect = 8e-35
Identities = 70/121 (57%), Positives = 95/121 (77%), Gaps = 1/121 (0%)
Query: 4 EVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAIL 63
+V+ T +AP IGPYSQ I V N + +GQIP+ E GE+V+G ++EQT +V +N++A+L
Sbjct: 2 KVVHTNQAPDAIGPYSQGIVVNNMFYSSGQIPLTAE-GELVQGTVEEQTHQVFKNLQAVL 60
Query: 64 EEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEAI 123
+EAGASL+ VVK TV++KD+NDF ++NEVY EYF KPAR VEV+RLPKDVL+E+E I
Sbjct: 61 KEAGASLDTVVKATVFIKDMNDFPRINEVYGEYFQTHKPARSCVEVARLPKDVLVEIEVI 120
Query: 124 A 124
A
Sbjct: 121 A 121
>sp|P37552|YABJ_BACSU PUTATIVE REGULATOR OF PURINE BIOSYNTHESIS >gi|2127039|pir||S66077
conserved hypothetical protein yabJ - Bacillus subtilis
>gi|467437|dbj|BAA05283.1| (D26185) unknown [Bacillus
subtilis] >gi|2632315|emb|CAB11824.1| (Z99104) similar
to hypothetical proteins [Bacillus subtilis]
Length = 125
Score = 142 bits (355), Expect = 1e-33
Identities = 69/121 (57%), Positives = 89/121 (73%), Gaps = 1/121 (0%)
Query: 4 EVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAIL 63
+ + T+ AP IGPYSQ I V N + +GQIP+ P +GE+V GDIKEQT +V N+KA+L
Sbjct: 3 KAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTP-SGEMVNGDIKEQTHQVFSNLKAVL 61
Query: 64 EEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEAI 123
EEAGAS VVK TV++ D+ FA++NEVY +YF KPAR VEV+RLPKD L+E+E I
Sbjct: 62 EEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKPARSCVEVARLPKDALVEIEVI 121
Query: 124 A 124
A
Sbjct: 122 A 122
>pdb|1QD9|A Chain A, Bacillus Subtilis Yabj >gi|6573366|pdb|1QD9|B Chain B,
Bacillus Subtilis Yabj >gi|6573367|pdb|1QD9|C Chain C,
Bacillus Subtilis Yabj
Length = 124
Score = 142 bits (355), Expect = 1e-33
Identities = 69/121 (57%), Positives = 89/121 (73%), Gaps = 1/121 (0%)
Query: 4 EVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAIL 63
+ + T+ AP IGPYSQ I V N + +GQIP+ P +GE+V GDIKEQT +V N+KA+L
Sbjct: 2 KAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTP-SGEMVNGDIKEQTHQVFSNLKAVL 60
Query: 64 EEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEAI 123
EEAGAS VVK TV++ D+ FA++NEVY +YF KPAR VEV+RLPKD L+E+E I
Sbjct: 61 EEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKPARSCVEVARLPKDALVEIEVI 120
Query: 124 A 124
A
Sbjct: 121 A 121
>pir||F72630 hypothetical protein APE1501 - Aeropyrum pernix (strain K1)
>gi|5105186|dbj|BAA80500.1| (AP000061) 123aa long
hypothetical protein [Aeropyrum pernix]
Length = 123
Score = 139 bits (348), Expect = 8e-33
Identities = 64/117 (54%), Positives = 88/117 (74%)
Query: 9 EKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILEEAGA 68
E APKP+GPYSQA++ G F+FV+GQIPI+PETG + +G KE KR ++N+KAI+E AG
Sbjct: 2 ETAPKPVGPYSQAVESGCFMFVSGQIPINPETGALEEGGFKESAKRALDNLKAIVEGAGY 61
Query: 69 SLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEAIAY 125
S++D+VKVTVY+ D++ F++ NEVY EYF PAR V V+ LP +E+EA+ Y
Sbjct: 62 SMDDIVKVTVYITDISRFSEFNEVYREYFNRPYPARAVVGVAALPLGAPLEVEAVLY 118
>sp|O25598|Y944_HELPY HYPOTHETICAL PROTEIN HP0944 >gi|7429318|pir||H64637 probable
translation initiation inhibitor - Helicobacter pylori
(strain 26695) >gi|2314082|gb|AAD07989.1| (AE000603)
conserved hypothetical protein [Helicobacter pylori
26695]
Length = 125
Score = 136 bits (340), Expect = 7e-32
Identities = 68/124 (54%), Positives = 87/124 (69%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
KEVI + APK IGPYSQAI + +FV+GQ+ ID TGE DI QT + +ENIKAI
Sbjct: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
Query: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEA 122
L+EAG ++ VVK T+ LK L+DFA +N +Y YF E PAR +V++LPKD L+E+EA
Sbjct: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
Query: 123 IAYK 126
IA K
Sbjct: 122 IAIK 125
>sp|Q9ZKQ6|Y944_HELPJ HYPOTHETICAL PROTEIN HP0944/JHP0879 >gi|7445000|pir||A71878
hypothetical protein jhp0879 - Helicobacter pylori
(strain J99) >gi|4155446|gb|AAD06450.1| (AE001517)
putative [Helicobacter pylori J99]
Length = 125
Score = 136 bits (340), Expect = 7e-32
Identities = 68/124 (54%), Positives = 87/124 (69%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
KEVI + APK IGPYSQAI + +FV+GQ+ ID TGE DI QT + +ENIKAI
Sbjct: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
Query: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEA 122
L+EAG ++ VVK T+ LK L+DFA +N +Y YF E PAR +V++LPKD L+E+EA
Sbjct: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFKEPYPARATFQVAKLPKDALVEIEA 121
Query: 123 IAYK 126
IA K
Sbjct: 122 IAIK 125
>sp|P44839|YJGF_HAEIN HYPOTHETICAL PROTEIN HI0719 >gi|1074492|pir||C64157 hypothetical
protein HI0719 - Haemophilus influenzae (strain Rd KW20)
>gi|1573721|gb|AAC22376.1| (U32754) conserved
hypothetical protein [Haemophilus influenzae Rd]
Length = 130
Score = 136 bits (339), Expect = 9e-32
Identities = 68/131 (51%), Positives = 94/131 (70%), Gaps = 5/131 (3%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK 60
M ++I TEKAP IGPY QA+ +GN + +GQIP++P TGE V DI Q ++ +EN+K
Sbjct: 1 MMTQIIHTEKAPAAIGPYVQAVDLGNLVLTSGQIPVNPATGE-VPADIVAQARQSLENVK 59
Query: 61 AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESK----PARVAVEVSRLPKDV 116
AI+E+AG + D+VK TV++KDLNDFA +N Y +F E+ PAR VEV+RLPKDV
Sbjct: 60 AIIEKAGLTAADIVKTTVFVKDLNDFAAVNAEYERFFKENNHPNFPARSCVEVARLPKDV 119
Query: 117 LIEMEAIAYKE 127
+E+EAIA ++
Sbjct: 120 GLEIEAIAVRK 130
>sp|P52761|Y709_SYNY3 HYPOTHETICAL 13.8 KD PROTEIN SLR0709 >gi|1361332|pir||S56682
hypothetical protein 2 - Synechocystis sp. (strain PCC
6803) >gi|1006602|dbj|BAA10755.1| (D64005) hypothetical
protein [Synechocystis sp.] >gi|1006750|emb|CAA54600.1|
(X77454) ORF2 [Synechocystis sp.]
Length = 130
Score = 135 bits (336), Expect = 2e-31
Identities = 64/126 (50%), Positives = 94/126 (73%), Gaps = 2/126 (1%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIV-KGDIKEQTKRVIENI 59
M ++I T +AP P+GPY+QAI F+F AGQI +DP+T I+ +G+++ Q K+V+ N+
Sbjct: 1 MTMKIIQTAQAPAPVGPYNQAIAANGFLFTAGQIALDPQTMTIMGEGNVEVQAKQVLTNL 60
Query: 60 KAILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGE-SKPARVAVEVSRLPKDVLI 118
A+L+EAG +VVK TV+LKD+NDFA +N +Y +YF E + PAR VEV+RLPKDVL+
Sbjct: 61 GAVLQEAGCGWENVVKTTVFLKDMNDFAAVNAIYGQYFDEATAPARSCVEVARLPKDVLV 120
Query: 119 EMEAIA 124
E++ +A
Sbjct: 121 EIDCVA 126
>pir||A82979 conserved hypothetical protein PA5339 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9951658|gb|AAG08724.1|AE004946_8 (AE004946)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 126
Score = 134 bits (334), Expect = 3e-31
Identities = 65/127 (51%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK 60
M K VI T+ AP IG YSQAIK GN ++V+GQIP+DP+T E+V+G +EQT +V EN+K
Sbjct: 1 MTKTVIHTDNAPAAIGTYSQAIKAGNTVYVSGQIPLDPKTMELVEG-FEEQTVQVFENLK 59
Query: 61 AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEM 120
A++E +G L+DV K+ ++L DL+ FAK+NE+ YF + PAR A+ V+ LPK +EM
Sbjct: 60 AVIEASGGYLHDVAKLNIFLTDLSHFAKVNEIMGRYFTQPYPARAAIGVAALPKGAQVEM 119
Query: 121 EAIAYKE 127
+AI E
Sbjct: 120 DAIVVLE 126
>pir||B44514 hypothetical protein 1 (vnfA 5' region) - Azotobacter vinelandii
Length = 127
Score = 133 bits (332), Expect = 6e-31
Identities = 62/123 (50%), Positives = 88/123 (71%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK 60
M+K VI T+KAP IG YSQAI+ G+ ++++GQIP+DP T E+V+GD + QT RV EN+K
Sbjct: 1 MSKSVINTDKAPAAIGTYSQAIRAGDTVYLSGQIPLDPGTMELVEGDFEAQTVRVFENLK 60
Query: 61 AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEM 120
A++E AG S D+VK+ ++L DL FAK+NEV YF + PAR A+ + LP+ +EM
Sbjct: 61 AVVEAAGGSFADIVKLNIFLTDLAHFAKVNEVMGRYFAQPYPARAAIACASLPRGAQVEM 120
Query: 121 EAI 123
+ I
Sbjct: 121 DGI 123
>sp|O52178|DFRA_MYXXA DFRA PROTEIN >gi|2736191|gb|AAB97678.1| (AF025847) DfrA [Myxococcus
xanthus]
Length = 131
Score = 133 bits (332), Expect = 6e-31
Identities = 63/126 (50%), Positives = 93/126 (73%), Gaps = 2/126 (1%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKV--GNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIEN 58
MA++ I +++APK IGPYSQA++V G F++GQIP+DP T E+V+GD+ Q +RV+EN
Sbjct: 4 MARKAIHSDQAPKAIGPYSQAVQVDAGKMTFLSGQIPLDPATMEMVQGDVVAQAERVMEN 63
Query: 59 IKAILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLI 118
+KA+L +G + VV+ T++L DL DFA++NEVY YF + PAR V+VS LP+ +
Sbjct: 64 LKAVLAASGLDFSHVVRCTIFLTDLGDFARVNEVYGRYFTGAPPARATVQVSALPRGSKV 123
Query: 119 EMEAIA 124
E++AIA
Sbjct: 124 EIDAIA 129
>gb|AAF24094.1| (AF118109) Brt1 [Schizophyllum commune]
Length = 128
Score = 133 bits (331), Expect = 8e-31
Identities = 63/125 (50%), Positives = 89/125 (70%), Gaps = 1/125 (0%)
Query: 1 MAKEVIFTEKAPKPI-GPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENI 59
M KE + T AP P+ G YSQAIK G ++ +G +P+D +TG+++ GD+K T + I+N+
Sbjct: 1 MPKEAVLTLNAPPPLPGIYSQAIKAGGMVYCSGAVPMDAKTGKLIDGDVKAHTHQCIKNL 60
Query: 60 KAILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIE 119
AILEEAG SLN+VVKV V+L +++DFA +NEVY EY+G+ KP R V V LP + +E
Sbjct: 61 SAILEEAGTSLNNVVKVNVFLSNMDDFAAVNEVYKEYWGDVKPCRTCVAVKTLPLNTDVE 120
Query: 120 MEAIA 124
+E IA
Sbjct: 121 IECIA 125
>pir||F65100 hypothetical 16.3 kD protein in exuR-tdcC intergenic region -
Escherichia coli (strain K-12) >gi|606054|gb|AAA57917.1|
(U18997) ORF_f150 [Escherichia coli]
>gi|1789501|gb|AAC76148.1| (AE000393) orf, hypothetical
protein [Escherichia coli K12]
Length = 150
Score = 132 bits (330), Expect = 1e-30
Identities = 62/127 (48%), Positives = 95/127 (73%), Gaps = 4/127 (3%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
K++I T++AP IGPY Q + +G+ +F +GQIP+ P+TGEI D+++Q + +EN+KAI
Sbjct: 23 KKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEI-PADVQDQARLSLENVKAI 81
Query: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESK---PARVAVEVSRLPKDVLIE 119
+ AG S+ D++K+TV++ DLNDFA +NEVY ++F E + P R V+V+RLPKDV +E
Sbjct: 82 VVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLE 141
Query: 120 MEAIAYK 126
+EAIA +
Sbjct: 142 IEAIAVR 148
>sp|P42631|TDCF_ECOLI TDCF PROTEIN
Length = 129
Score = 132 bits (330), Expect = 1e-30
Identities = 62/127 (48%), Positives = 95/127 (73%), Gaps = 4/127 (3%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
K++I T++AP IGPY Q + +G+ +F +GQIP+ P+TGEI D+++Q + +EN+KAI
Sbjct: 2 KKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEI-PADVQDQARLSLENVKAI 60
Query: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESK---PARVAVEVSRLPKDVLIE 119
+ AG S+ D++K+TV++ DLNDFA +NEVY ++F E + P R V+V+RLPKDV +E
Sbjct: 61 VVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLE 120
Query: 120 MEAIAYK 126
+EAIA +
Sbjct: 121 IEAIAVR 127
>gb|AAF68409.1|AF237923_1 (AF237923) conserved hypothetical protein [Pasteurella multocida]
Length = 129
Score = 132 bits (329), Expect = 1e-30
Identities = 68/127 (53%), Positives = 92/127 (71%), Gaps = 5/127 (3%)
Query: 4 EVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAIL 63
+VI T+ AP IGPY QA+ +GN + +GQIP++P+TGE V DI Q ++ +EN+KAI+
Sbjct: 3 KVIHTDNAPAAIGPYVQAVDLGNMLLTSGQIPVNPKTGE-VPADIVAQARQSLENVKAIV 61
Query: 64 EEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGE----SKPARVAVEVSRLPKDVLIE 119
E+AG + ++VK TV++KDLNDFA +N Y +F E S PAR VEV+RLPKDV IE
Sbjct: 62 EQAGLQVANIVKTTVFVKDLNDFAAVNAEYERFFKENNHPSFPARSCVEVARLPKDVGIE 121
Query: 120 MEAIAYK 126
+EAIA K
Sbjct: 122 IEAIAVK 128
>pir||B82067 conserved hypothetical protein VC2512 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9657095|gb|AAF95654.1|
(AE004321) conserved hypothetical protein [Vibrio
cholerae]
Length = 129
Score = 131 bits (327), Expect = 2e-30
Identities = 63/128 (49%), Positives = 93/128 (72%), Gaps = 5/128 (3%)
Query: 4 EVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAIL 63
+V+ T+ AP IGPY Q + +GN + +GQIP++P TGEI DI Q ++ ++N+KA++
Sbjct: 3 KVLHTDAAPAAIGPYIQGVDLGNMVLTSGQIPVNPATGEI-PADIAAQARQSLDNVKAVV 61
Query: 64 EEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESK----PARVAVEVSRLPKDVLIE 119
E +G ++ D+VK+TV++KDLNDF +N+VY +F E K PAR VEV+RLPKDV IE
Sbjct: 62 EASGLTVGDIVKMTVFVKDLNDFGTVNQVYGAFFDEHKVAHYPARSCVEVARLPKDVGIE 121
Query: 120 MEAIAYKE 127
+EAIA ++
Sbjct: 122 IEAIAVRK 129
>pir||S56469 hypothetical 13.5K protein (mgtA-pyrI intergenic region) -
Escherichia coli >gi|537085|gb|AAA97140.1| (U14003)
ORF_f141 [Escherichia coli] >gi|1790691|gb|AAC77200.1|
(AE000495) orf, hypothetical protein [Escherichia coli
K12]
Length = 141
Score = 131 bits (325), Expect = 4e-30
Identities = 65/126 (51%), Positives = 88/126 (69%), Gaps = 4/126 (3%)
Query: 4 EVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAIL 63
+ I TE AP IGPY Q + +GN I +GQIP++P+TGE V D+ Q ++ ++N+KAI+
Sbjct: 16 KTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGE-VPADVAAQARQSLDNVKAIV 74
Query: 64 EEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESK---PARVAVEVSRLPKDVLIEM 120
E AG + D+VK TV++KDLNDFA +N Y +F E PAR VEV+RLPKDV IE+
Sbjct: 75 EAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEI 134
Query: 121 EAIAYK 126
EAIA +
Sbjct: 135 EAIAVR 140
>sp|P39330|YJGF_ECOLI 13.5 KD PROTEIN IN MGTA-PYRI INTERGENIC REGION
Length = 128
Score = 131 bits (325), Expect = 4e-30
Identities = 65/126 (51%), Positives = 88/126 (69%), Gaps = 4/126 (3%)
Query: 4 EVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAIL 63
+ I TE AP IGPY Q + +GN I +GQIP++P+TGE V D+ Q ++ ++N+KAI+
Sbjct: 3 KTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGE-VPADVAAQARQSLDNVKAIV 61
Query: 64 EEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESK---PARVAVEVSRLPKDVLIEM 120
E AG + D+VK TV++KDLNDFA +N Y +F E PAR VEV+RLPKDV IE+
Sbjct: 62 EAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEI 121
Query: 121 EAIAYK 126
EAIA +
Sbjct: 122 EAIAVR 127
>pdb|1QU9|A Chain A, 1.2 A Crystal Structure Of Yjgf Gene Product From E. Coli
>gi|6573317|pdb|1QU9|B Chain B, 1.2 A Crystal Structure
Of Yjgf Gene Product From E. Coli >gi|6573318|pdb|1QU9|C
Chain C, 1.2 A Crystal Structure Of Yjgf Gene Product
From E. Coli
Length = 128
Score = 131 bits (325), Expect = 4e-30
Identities = 65/126 (51%), Positives = 88/126 (69%), Gaps = 4/126 (3%)
Query: 4 EVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAIL 63
+ I TE AP IGPY Q + +GN I +GQIP++P+TGE V D+ Q ++ ++N+KAI+
Sbjct: 3 KTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGE-VPADVAAQARQSLDNVKAIV 61
Query: 64 EEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESK---PARVAVEVSRLPKDVLIEM 120
E AG + D+VK TV++KDLNDFA +N Y +F E PAR VEV+RLPKDV IE+
Sbjct: 62 EAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSXVEVARLPKDVKIEI 121
Query: 121 EAIAYK 126
EAIA +
Sbjct: 122 EAIAVR 127
>gb|AAD22768.1|AF095578_1 (AF095578) YjgF [Salmonella typhimurium]
Length = 128
Score = 130 bits (323), Expect = 7e-30
Identities = 63/126 (50%), Positives = 88/126 (69%), Gaps = 4/126 (3%)
Query: 4 EVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAIL 63
+ I TE AP IGPY Q + +G+ + +GQIP+DP+TG + + D+ Q ++ +EN+KAI+
Sbjct: 3 KTIATENAPAAIGPYVQGVDLGSMVITSGQIPVDPKTGAVAE-DVSAQARQSLENVKAIV 61
Query: 64 EEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESK---PARVAVEVSRLPKDVLIEM 120
E AG + D+VK TV++KDLNDFA +N Y +F E PAR VEV+RLPKDV IE+
Sbjct: 62 EAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEI 121
Query: 121 EAIAYK 126
EAIA +
Sbjct: 122 EAIAVR 127
>sp|P40431|YVN1_AZOVI HYPOTHETICAL 13.5 KD PROTEIN IN VNFA 5'REGION (ORF1)
>gi|1088268|gb|AAA82514.1| (M26752) ORF 1; putative
[Azotobacter vinelandii]
Length = 127
Score = 128 bits (318), Expect = 3e-29
Identities = 60/123 (48%), Positives = 85/123 (68%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK 60
M+K VI T+KAP IG YSQAI+ G+ ++++GQIP+DP T E+V+GD + QT RV EN+K
Sbjct: 1 MSKSVINTDKAPAAIGTYSQAIRAGDTVYLSGQIPLDPGTMELVEGDFEAQTVRVFENLK 60
Query: 61 AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEM 120
A++E AG S D+VK+ ++L DL FA NE YF + PAR A+ + LP+ +EM
Sbjct: 61 AVVEAAGGSFADIVKLNIFLTDLAHFANGNECMGRYFAQPYPARAAIACASLPRGAQVEM 120
Query: 121 EAI 123
+ I
Sbjct: 121 DGI 123
>sp|O66689|Y364_AQUAE HYPOTHETICAL PROTEIN AQ_364 >gi|7444997|pir||E70332 conserved
hypothetical protein aq_364 - Aquifex aeolicus
>gi|2983046|gb|AAC06655.1| (AE000686) hypothetical
protein [Aquifex aeolicus]
Length = 125
Score = 127 bits (316), Expect = 4e-29
Identities = 61/123 (49%), Positives = 89/123 (71%), Gaps = 3/123 (2%)
Query: 6 IFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILEE 65
I T KAP P+GPYSQA++V F+F++GQI I+PETG++V+G KEQ ++ +N+ AILEE
Sbjct: 4 IKTPKAPVPVGPYSQAVEVNGFLFISGQIGINPETGKLVEG-FKEQVIQIFKNVDAILEE 62
Query: 66 AGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGE--SKPARVAVEVSRLPKDVLIEMEAI 123
AG ++VKVT+Y+ D+ F ++NE+Y +YF + KPARV V V LP + +E+E +
Sbjct: 63 AGLKRENIVKVTIYITDIKKFKELNEIYEDYFKDVSVKPARVTVGVKELPLNAEVEIEIV 122
Query: 124 AYK 126
A K
Sbjct: 123 AVK 125
>pir||G75265 probable protein translation inhibitor - Deinococcus radiodurans
(strain R1) >gi|6460334|gb|AAF12053.1|AE002080_7
(AE002080) protein translation inhibitor, putative
[Deinococcus radiodurans]
Length = 125
Score = 127 bits (315), Expect = 6e-29
Identities = 60/122 (49%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
K+++ T AP IGPYSQA+ GN + +GQIP+ + GE+V G I EQT++VI+N++A+
Sbjct: 2 KDIVQTADAPAAIGPYSQAVTFGNLVVTSGQIPLTAQ-GELVTGGIAEQTEQVIQNLRAV 60
Query: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEA 122
L AG L+ VVK TV+L D+N+F MN VY ++F PAR V+V+RLP+DV +E+E
Sbjct: 61 LAAAGTDLDRVVKTTVFLADMNEFTAMNAVYEQHFTAPYPARSTVQVARLPRDVRVEIEV 120
Query: 123 IA 124
+A
Sbjct: 121 LA 122
>gi|6680277 heat-responsive protein 12 [Mus musculus]
>gi|1708292|sp|P52760|HR12_MOUSE HEAT-RESPONSIVE PROTEIN
12 >gi|1255116|gb|AAA96033.1| (U50631) heat-responsive
protein [Mus musculus]
Length = 173
Score = 126 bits (313), Expect = 1e-28
Identities = 58/122 (47%), Positives = 86/122 (69%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
++VI T KAP IGPYSQA++V I+++GQ+ +DP +G++V G + E+ K+ ++N+ I
Sbjct: 44 RKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGEI 103
Query: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEA 122
L+ AG N+VVK TV L D+NDF +NE+Y YF S PAR A +V+ LP+ +E+EA
Sbjct: 104 LKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQGSLPARAAYQVAALPRGSRVEIEA 163
Query: 123 IA 124
IA
Sbjct: 164 IA 165
>pir||B82817 translation initiation inhibitor XF0353 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9105181|gb|AAF83163.1|AE003887_6 (AE003887)
translation initiation inhibitor [Xylella fastidiosa]
Length = 127
Score = 125 bits (311), Expect = 2e-28
Identities = 59/123 (47%), Positives = 84/123 (67%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK 60
M+ + I TEKAP IGPYSQA++VGN ++ +GQIP+DP TG IV GD+ Q +R +N++
Sbjct: 1 MSFQTIHTEKAPAAIGPYSQAVRVGNTVYFSGQIPLDPATGTIVVGDLAVQARRAFDNLR 60
Query: 61 AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEM 120
A+ E A SL+ +V++ +YL DL FA +N V EYF PAR ++VS LPK E+
Sbjct: 61 AVAEAANGSLSKIVRLGLYLTDLEQFAVVNAVMQEYFQAPFPARSTIQVSGLPKGADFEV 120
Query: 121 EAI 123
+A+
Sbjct: 121 DAV 123
>gb|AAC72281.1| (AF000167) 14.3 kDa perchloric acid soluble protein [Capra hircus]
Length = 137
Score = 123 bits (306), Expect = 7e-28
Identities = 58/124 (46%), Positives = 85/124 (67%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK 60
+ + +I T KAP IGPYSQA+ V I+++GQ+ +DP +G++V G + E+ K+ + NI
Sbjct: 4 LVRRIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTNIG 63
Query: 61 AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEM 120
IL+ AG +VVK TV L D+NDF+ +N+VY +YF S PAR A +V+ LPK +E+
Sbjct: 64 EILKAAGCDFTNVVKATVLLADINDFSAVNDVYKQYFQSSFPARAAYQVAALPKGGRVEI 123
Query: 121 EAIA 124
EAIA
Sbjct: 124 EAIA 127
>pir||F81174 ribonuclease, probable NMB0662 [imported] - Neisseria meningitidis
(group B strain MD58) >gi|7225887|gb|AAF41080.1|
(AE002420) ribonuclease, putative [Neisseria
meningitidis MC58]
Length = 129
Score = 123 bits (306), Expect = 7e-28
Identities = 58/124 (46%), Positives = 87/124 (69%), Gaps = 1/124 (0%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIV-KGDIKEQTKRVIENI 59
M+K +I T+KAP IG YSQA++ G+ ++++GQIP+DP T +V GD + + ++V +N+
Sbjct: 1 MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVVGNGDFRAEARQVFQNL 60
Query: 60 KAILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIE 119
+A+ E AG +L D+VK+ YL DL +FA NEV +E+ E PAR AV V+ LPK V +E
Sbjct: 61 QAVAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPFPARAAVGVASLPKGVQVE 120
Query: 120 MEAI 123
EA+
Sbjct: 121 AEAV 124
>gi|5032215 translational inhibitor protein p14.5 [Homo sapiens]
>gi|1717975|sp|P52758|UK14_HUMAN 14.5 KD TRANSLATIONAL
INHIBITOR PROTEIN (P14.5) (UK114 ANTIGEN HOMOLOG)
>gi|1177435|emb|CAA64670.1| (X95384) 14.5 kDa
translational inhibitor protein, p14.5 [Homo sapiens]
Length = 137
Score = 123 bits (306), Expect = 7e-28
Identities = 58/124 (46%), Positives = 85/124 (67%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK 60
+ + VI T KAP IGPYSQA+ V I+++GQI +DP +G++V G + E+ K+ ++N+
Sbjct: 4 LIRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMG 63
Query: 61 AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEM 120
IL+ AG +VVK TV L D+NDF +NE+Y +YF + PAR A +V+ LPK IE+
Sbjct: 64 EILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIEI 123
Query: 121 EAIA 124
EA+A
Sbjct: 124 EAVA 127
>pir||A81932 hypothetical protein NMA0861 [imported] - Neisseria meningitidis
(group A strain Z2491) >gi|7379577|emb|CAB84142.1|
(AL162754) hypothetical protein NMA0861 [Neisseria
meningitidis Z2491]
Length = 129
Score = 122 bits (303), Expect = 1e-27
Identities = 58/124 (46%), Positives = 87/124 (69%), Gaps = 1/124 (0%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIV-KGDIKEQTKRVIENI 59
M+K +I T+KAP IG YSQA++ G+ ++++GQIP+DP T +V GD + + ++V +N+
Sbjct: 1 MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVVGNGDFRAEARQVFKNL 60
Query: 60 KAILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIE 119
+A+ E AG +L D+VK+ YL DL +FA NEV +E+ E PAR AV V+ LPK V +E
Sbjct: 61 QAVAEAAGGTLADIVKLNAYLTDLANFAVFNEVMAEFIAEPFPARAAVGVASLPKGVQVE 120
Query: 120 MEAI 123
EA+
Sbjct: 121 AEAV 124
>pir||A81284 hypothetical protein Cj1388 [imported] - Campylobacter jejuni
(strain NCTC 11168) >gi|6968822|emb|CAB73815.1|
(AL139078) hypothetical protein Cj1388 [Campylobacter
jejuni]
Length = 120
Score = 121 bits (301), Expect = 3e-27
Identities = 59/115 (51%), Positives = 78/115 (67%)
Query: 12 PKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILEEAGASLN 71
PK IGPYS +V +F++GQ+PI+P +GEI DIKEQTK+ ++NI AILEE G S +
Sbjct: 5 PKAIGPYSAYREVNGLLFISGQLPINPASGEIESSDIKEQTKQSLKNIGAILEENGISYD 64
Query: 72 DVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEAIAYK 126
V+K T +L D+NDF NE+Y+E+F PAR A V LPK +E+E IA K
Sbjct: 65 KVIKTTCFLADINDFVAFNEIYAEFFKAPYPARSAFAVKDLPKKAKVEIEIIAQK 119
>dbj|BAB02821.1| (AB024036) contains similarity to protein translation
inhibitor~gene_id:MQC12.17 [Arabidopsis thaliana]
Length = 143
Score = 121 bits (301), Expect = 3e-27
Identities = 57/122 (46%), Positives = 85/122 (68%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
KEV+ TEKAP +GPYSQAIK N +F++G + + PETG+ V +++QT++V++N+ I
Sbjct: 20 KEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNMGEI 79
Query: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEA 122
L+ +GA + VVK T+ L DL DF +NE+Y++YF PAR +V+ LP + IE+E
Sbjct: 80 LKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNAKIEIEC 139
Query: 123 IA 124
IA
Sbjct: 140 IA 141
>sp|P52759|UK14_RAT 14.5 KD TRANSLATIONAL INHIBITOR PROTEIN (PERCHROLIC ACID SOLUBLE
PROTEIN) >gi|1345430|dbj|BAA08359.1| (D49363) perchrolic
acid soluble protein [Rattus sp.]
Length = 137
Score = 121 bits (300), Expect = 3e-27
Identities = 59/122 (48%), Positives = 83/122 (67%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
++VI T KAP IG YSQA+ V I+V+GQI +DP +G++V G + E+ K+ ++N+ I
Sbjct: 6 RKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGEI 65
Query: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEA 122
L+ AG +VVK TV L D+NDF +NE+Y YF + PAR A +V+ LPK IE+EA
Sbjct: 66 LKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKGSRIEIEA 125
Query: 123 IA 124
IA
Sbjct: 126 IA 127
>sp|P55654|Y4SK_RHISN HYPOTHETICAL 13.3 KD PROTEIN Y4SK >gi|2182626|gb|AAB91850.1|
(AE000097) Y4sK [Rhizobium sp. NGR234]
Length = 126
Score = 121 bits (300), Expect = 3e-27
Identities = 59/120 (49%), Positives = 78/120 (64%)
Query: 4 EVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAIL 63
E I T AP +GPYSQAIKVG+ +FV+GQ+PIDP TGE + EQ ++ ++N++AI
Sbjct: 3 EPISTNDAPGAVGPYSQAIKVGDLLFVSGQLPIDPATGEFNSANAVEQAEQCLKNLQAIA 62
Query: 64 EEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEAI 123
AG L+ VK TV L DL DFA +N VY+ +F PAR EV LPK +E+EA+
Sbjct: 63 RAAGTDLSKTVKTTVLLTDLGDFADINRVYTGFFSTPYPARACYEVKALPKGAKVEIEAV 122
>pir||S74181 tumor antigen UK114 - goat
Length = 137
Score = 119 bits (296), Expect = 1e-26
Identities = 57/123 (46%), Positives = 84/123 (67%)
Query: 2 AKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKA 61
++E + KAP IGPYSQA+ V I+++GQ+ +DP +G++V G + E+ K+ + NI
Sbjct: 5 SEEPVGEAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTNIGE 64
Query: 62 ILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEME 121
IL+ AG +VVK TV L D+NDF+ +N+VY +YF S PAR A +V+ LPK +E+E
Sbjct: 65 ILKAAGCDFTNVVKATVLLADINDFSAVNDVYKQYFQSSFPARAAYQVAALPKGGRVEIE 124
Query: 122 AIA 124
AIA
Sbjct: 125 AIA 127
>gb|AAB70815.1| (AF015949) perchloric acid soluble protein [Rattus norvegicus]
Length = 137
Score = 119 bits (295), Expect = 1e-26
Identities = 58/122 (47%), Positives = 82/122 (66%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
++VI T KAP IG YSQA+ V I+V+GQI +DP +G++V G + E+ + ++N+ I
Sbjct: 6 RKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEANQALKNLGEI 65
Query: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEA 122
L+ AG +VVK TV L D+NDF +NE+Y YF + PAR A +V+ LPK IE+EA
Sbjct: 66 LKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKGSRIEIEA 125
Query: 123 IA 124
IA
Sbjct: 126 IA 127
>sp|Q10121|YSD2_CAEEL HYPOTHETICAL 19.6 KD PROTEIN C23G10.2 IN CHROMOSOME III PRECURSOR
>gi|7496338|pir||T15580 hypothetical protein C23G10.2 -
Caenorhabditis elegans >gi|9802867|gb|AAF99878.1|
(U39851) Contains similarity to Pfam domain: PF01042
(DUF10), Score=242.9, E-value=1.4e-69, N=1
[Caenorhabditis elegans]
Length = 185
Score = 118 bits (293), Expect = 2e-26
Identities = 55/124 (44%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK 60
+ +++I + AP IGPYSQA++ GN I+++G + +DP+TG++ +G + EQT + ++N+
Sbjct: 53 VTRQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEG-VVEQTHQSLKNLG 111
Query: 61 AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEM 120
+L+ AGA +VVK TV L+++ DFA +NEVY +YF PAR A +V+ LPK L+E+
Sbjct: 112 EVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLVEI 171
Query: 121 EAIA 124
EA+A
Sbjct: 172 EAVA 175
>gb|AAG20243.1| (AE005099) Vng2099c [Halobacterium sp. NRC-1]
Length = 127
Score = 118 bits (292), Expect = 3e-26
Identities = 60/122 (49%), Positives = 82/122 (67%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
K I T AP +G YSQA G+ +F AGQIP+ P+ I I QT++ +EN+KAI
Sbjct: 2 KRPIETADAPAAVGAYSQAATDGDVVFTAGQIPMTPDGELIADEPIDVQTRQSLENVKAI 61
Query: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEA 122
LE G ++ DV+KV+V++ D++DF MN Y EYF ++ PAR AVEV+ LPK V +E+EA
Sbjct: 62 LEAEGLNMQDVLKVSVFMDDMDDFDAMNAAYKEYFQDNPPARSAVEVAALPKGVGVEIEA 121
Query: 123 IA 124
IA
Sbjct: 122 IA 123
>sp|P57452|Y371_BUCAI HYPOTHETICAL PROTEIN BU371 >gi|10039041|dbj|BAB13075.1| (AP001119)
hypothetical protein [Buchnera sp. APS]
Length = 128
Score = 117 bits (290), Expect = 5e-26
Identities = 61/126 (48%), Positives = 91/126 (71%), Gaps = 4/126 (3%)
Query: 5 VIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILE 64
+I T+ APKPIGPYSQA+K+ NFI ++GQIPID + +I + +I EQT V++NIK IL
Sbjct: 4 IIETKDAPKPIGPYSQALKIDNFIILSGQIPIDVISNQIPE-NIAEQTYLVLKNIKLILV 62
Query: 65 EAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESK---PARVAVEVSRLPKDVLIEME 121
A +++++K TV+ DL +NE+Y ++F ++K PAR VEV +LPK+V IE+E
Sbjct: 63 HAKFQVHNIIKTTVFTTDLKKINIINEIYKKFFIDNKSNFPARSCVEVQKLPKNVKIEIE 122
Query: 122 AIAYKE 127
A+A+K+
Sbjct: 123 AMAFKK 128
>sp|P80601|UK14_CAPHI 14.5 KD TRANSLATIONAL INHIBITOR PROTEIN (UK114 ANTIGEN)
Length = 137
Score = 116 bits (288), Expect = 8e-26
Identities = 56/123 (45%), Positives = 83/123 (66%)
Query: 2 AKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKA 61
++E + KAP IG YSQA+ V I+++GQ+ +DP +G++V G + E+ K+ + NI
Sbjct: 5 SEEPVGEAKAPAAIGTYSQAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTNIGE 64
Query: 62 ILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEME 121
IL+ AG +VVK TV L D+NDF+ +N+VY +YF S PAR A +V+ LPK +E+E
Sbjct: 65 ILKAAGCDFTNVVKATVLLADINDFSAVNDVYKQYFQSSFPARAAYQVAALPKGGRVEIE 124
Query: 122 AIA 124
AIA
Sbjct: 125 AIA 127
>sp|P97117|Y142_LEUMC HYPOTHETICAL 14.2 KD PROTEIN >gi|1857050|gb|AAB48552.1| (U50749)
unknown [Leuconostoc mesenteroides subsp. cremoris]
Length = 130
Score = 116 bits (287), Expect = 1e-25
Identities = 59/130 (45%), Positives = 84/130 (64%), Gaps = 4/130 (3%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK 60
M+K+V+ T APK +GPYSQAI N ++++GQI IDPET E EQ ++ +NI
Sbjct: 1 MSKKVVSTTTAPKALGPYSQAILNDNTLYISGQIGIDPETDEFAGATTAEQAHQIFDNID 60
Query: 61 AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFG----ESKPARVAVEVSRLPKDV 116
IL EA S ND+VK ++ D+ DFA +N++Y++YF E PAR AV+V+ LPK+
Sbjct: 61 NILHEAEFSRNDIVKAALFFDDIADFALVNDIYAQYFDTTSVEEFPARSAVQVAALPKNA 120
Query: 117 LIEMEAIAYK 126
+E+E A K
Sbjct: 121 KLEIEITAMK 130
>gi|6320899 heat-regulated protein; Hig1p [Saccharomyces cerevisiae]
>gi|731467|sp|P40037|YEO7_YEAST HYPOTHETICAL 13.9 KD
PROTEIN IN FCY2-PET117 INTERGENIC REGION
>gi|1077661|pir||S50560 hypothetical protein YER057c -
yeast (Saccharomyces cerevisiae)
>gi|603293|gb|AAB64593.1| (U18813) Yer057cp
[Saccharomyces cerevisiae]
Length = 129
Score = 115 bits (285), Expect = 2e-25
Identities = 57/119 (47%), Positives = 83/119 (68%), Gaps = 1/119 (0%)
Query: 6 IFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILEE 65
+ E AP YS A+KV N IF++GQIP+ P+ ++V+G I ++ ++VI+NIK +LE
Sbjct: 8 VICESAPAAAASYSHAMKVNNLIFLSGQIPVTPDN-KLVEGSIADKAEQVIQNIKNVLEA 66
Query: 66 AGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEAIA 124
+ +SL+ VVKV ++L D+N FA+ N VY++YF KPAR V V+ LP V +EMEAIA
Sbjct: 67 SNSSLDRVVKVNIFLADINHFAEFNSVYAKYFNTHKPARSCVAVAALPLGVDMEMEAIA 125
>sp|O34133|ALDR_LACLA PUTATIVE REGULATOR ALDR >gi|2565162|gb|AAB81924.1| (U92974) aldR
[Lactococcus lactis]
Length = 126
Score = 112 bits (277), Expect = 2e-24
Identities = 56/121 (46%), Positives = 84/121 (69%)
Query: 4 EVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAIL 63
++I T AP IGPY Q V ++ +GQIP++P GEIV I+ QT++V++NI AIL
Sbjct: 2 KIIATLDAPAAIGPYVQGKIVNGLLYASGQIPLNPLNGEIVGDSIETQTEQVMKNISAIL 61
Query: 64 EEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEAI 123
+EA + + V+K T +LK++ DF++ N +YS++F + AR AV V+ LPK+VLIE+E I
Sbjct: 62 KEAHSDFDLVIKTTCFLKNIEDFSRFNAIYSKFFDKEFAARSAVGVAGLPKNVLIEIEVI 121
Query: 124 A 124
A
Sbjct: 122 A 122
>gb|AAF44934.1|AE003406_139 (AE003416) symbol=BG:DS07851.3; cDNA=method:''sim4'',
score:''1000.0'', desc:''GM01181 GM Drosophila
melanogaster ovary BlueScript Drosophila melanogaster
cDNA clone, full length mRNA sequence from BDGP'';
match=method:''BLASTX'', version:''2.0a19MP-Wa>
>gi|7298219|gb|AAF53452.1| (AE003647) BG:DS07851.3 gene
product [Drosophila melanogaster]
Length = 138
Score = 111 bits (275), Expect = 3e-24
Identities = 50/124 (40%), Positives = 84/124 (67%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK 60
+ +++I T A KP+ PY+QA+ ++V+G + +D +T ++V G EQ ++ +EN++
Sbjct: 4 IVRKLISTANAAKPVAPYNQAVVADRTVYVSGCLGLDKDTMKLVPGGPTEQAQKALENLE 63
Query: 61 AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEM 120
A+L+ A + ++ V+K TV+LKDLNDF +NEVY F + PAR +V++LP D L+E+
Sbjct: 64 AVLKAADSGVDKVIKNTVFLKDLNDFGAVNEVYKRVFNKDFPARSCFQVAKLPMDALVEI 123
Query: 121 EAIA 124
E IA
Sbjct: 124 ECIA 127
>gi|6322138 Mmd1p [Saccharomyces cerevisiae] >gi|731809|sp|P40185|YIF1_YEAST
15.9 KD PROTEIN IN RPL34B-SYG1 INTERGENIC REGION
>gi|626341|pir||S48428 hypothetical protein YIL051c -
yeast (Saccharomyces cerevisiae)
>gi|557817|emb|CAA86171.1| (Z38060) orf, len: 145, CAI:
0.33, similar to B44514 B44514 HYPOTHETICAL PROTEIN 1
(VNFA 5' REGION) [Saccharomyces cerevisiae]
Length = 145
Score = 109 bits (271), Expect = 8e-24
Identities = 54/122 (44%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 6 IFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILEE 65
+ T+ AP YSQA+K NF++V+GQIP P+ + V+G I E+ ++V +N+K IL E
Sbjct: 24 VSTKLAPPAAASYSQAMKANNFVYVSGQIPYTPDN-KPVQGSISEKAEQVFQNVKNILAE 82
Query: 66 AGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEAIAY 125
+ +SL+++VKV V+L D+ +FA+ N VY+++F KPAR V V+ LP +V +EME IA
Sbjct: 83 SNSSLDNIVKVNVFLADMKNFAEFNSVYAKHFHTHKPARSCVGVASLPLNVDLEMEVIAV 142
Query: 126 KE 127
++
Sbjct: 143 EK 144
>sp|O43003|YB94_SCHPO HYPOTHETICAL 17.5 KD PROTEIN IN CHROMOSOME II
>gi|7491575|pir||T40143 hypothetical protein SPBC2G2.04c
- fission yeast (Schizosaccharomyces pombe)
>gi|2956771|emb|CAA17884.1| (AL022103) hypothetical
protein [Schizosaccharomyces pombe]
Length = 162
Score = 101 bits (248), Expect = 4e-21
Identities = 49/112 (43%), Positives = 78/112 (68%), Gaps = 5/112 (4%)
Query: 16 GPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILEEAGASLNDVVK 75
GPY+QAIK I+ +GQIP+ G++++G + +QT++ + N++ +L EAG+SLN +VK
Sbjct: 51 GPYNQAIKANGVIYCSGQIPV--ANGKVIEGTVGDQTRQCLLNLQEVLTEAGSSLNKIVK 108
Query: 76 VTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLP---KDVLIEMEAIA 124
V ++L D++DFA +N+VY+E + KPAR V V +P + V IE+E IA
Sbjct: 109 VNIFLADMDDFAAVNKVYTEVLPDPKPARSCVAVKTVPLSTQGVKIEIECIA 160
>pir||T50060 probable translation initiation inhibitor [imported] - fission
yeast (Schizosaccharomyces pombe)
>gi|6594235|emb|CAB63548.1| (AL133522) putative
translation initiation inhibitor [Schizosaccharomyces
pombe] >gi|6594269|emb|CAB63546.1| (AL133521) putative
translation initiation inhibitor [Schizosaccharomyces
pombe]
Length = 126
Score = 96.7 bits (237), Expect = 8e-20
Identities = 51/112 (45%), Positives = 70/112 (61%), Gaps = 5/112 (4%)
Query: 16 GPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILEEAGASLNDVVK 75
GPY+QA+K G IF +GQ + + G V G I+EQT+ IEN+ +L AG+SL +VK
Sbjct: 15 GPYNQAVKSGGLIFCSGQAAV--KDGNFVPGTIQEQTRLTIENLAEVLRVAGSSLEKLVK 72
Query: 76 VTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLP---KDVLIEMEAIA 124
V ++L D++DFA MNEVY E + PAR V ++P K IE+E IA
Sbjct: 73 VNIFLTDIDDFAAMNEVYKEMLPDPMPARTTVAAGKIPLSSKGGKIEIECIA 124
>emb|CAC16451.1| (AL450165) conserved hypothetical protein [Streptomyces coelicolor]
Length = 137
Score = 92.8 bits (227), Expect = 1e-18
Identities = 50/122 (40%), Positives = 72/122 (58%), Gaps = 4/122 (3%)
Query: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
K+ + T+ AP+P G YSQ + G F+F AG P DP TG + KG + QT +V+ N+ A+
Sbjct: 7 KQAVHTDGAPRPAGAYSQGVVAGGFLFTAGFGPQDPVTGAVPKG-VGAQTAQVLRNVGAV 65
Query: 63 LEEAGASLNDVVKVTVYLKDL-NDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEME 121
L G S DVVKVT +L+ L DFA + Y E+F E P R V + D+L+E++
Sbjct: 66 LAARGLSPRDVVKVTAHLQHLRRDFAAYDAAYREFFEEPHPVRTTVGSDLM--DILVEID 123
Query: 122 AI 123
+
Sbjct: 124 VV 125
>dbj|BAB03536.1| (AB020521) AmnE [Pseudomonas sp.]
Length = 142
Score = 90.1 bits (220), Expect = 8e-18
Identities = 49/128 (38%), Positives = 77/128 (59%), Gaps = 10/128 (7%)
Query: 9 EKAPKPIGPYSQAIKVGNFIFVAGQ---------IPIDPETGEIVKGDIKEQTKRVIENI 59
E KP+G + + G+F+FV+G + +P+ + +I+ QT+ VI NI
Sbjct: 13 EGKAKPMGSFPHVKRAGDFLFVSGTSSRRPDNTFVGAEPDDTGRPRPNIELQTREVISNI 72
Query: 60 KAILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLP-KDVLI 118
+ IL+ GA L DVV+V YL ++NDFA N+VY+E+F + PAR V V +LP ++I
Sbjct: 73 RDILQSVGADLGDVVEVCSYLVNMNDFAAYNKVYAEFFDATGPARTTVAVHQLPHPQLVI 132
Query: 119 EMEAIAYK 126
E++ +AYK
Sbjct: 133 EIKVVAYK 140
>pir||S30349 perchloric acid-soluble protein, 23K - rat
>gi|4456766|emb|CAB36976.1| (X70825) perchloric acid
soluble protein [Rattus norvegicus]
Length = 99
Score = 88.5 bits (216), Expect = 2e-17
Identities = 41/89 (46%), Positives = 60/89 (67%)
Query: 36 IDPETGEIVKGDIKEQTKRVIENIKAILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSE 95
+DP +G++V G + E+ K+ ++N+ IL+ AG +VVK TV L D+NDF +NE+Y
Sbjct: 1 MDPSSGQLVPGGVAEEAKQALKNLGEILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKT 60
Query: 96 YFGESKPARVAVEVSRLPKDVLIEMEAIA 124
YF + PAR A +V+ LPK IE+EAIA
Sbjct: 61 YFQGNLPARAAYQVAALPKGSRIEIEAIA 89
>pir||A83256 conserved hypothetical protein PA3123 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949235|gb|AAG06511.1|AE004736_8 (AE004736)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 125
Score = 88.2 bits (215), Expect = 3e-17
Identities = 45/107 (42%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
Query: 17 PYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILEEAGASLNDVVKV 76
P+S+A++ G F+F++GQ+P+ P +GE+V+GDI+ QT+ V+ I LE GA + +VKV
Sbjct: 15 PFSRAVRAGGFLFLSGQVPMSP-SGEVVRGDIQTQTEAVMARIGETLESCGARFDQLVKV 73
Query: 77 TVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVS-RLPKDVLIEMEA 122
TV+L D+ FA NEVY + + P R V L DV +E++A
Sbjct: 74 TVWLSDMAHFAGFNEVYQRHVQGALPVRSTVTAGLALGVDVEVEVQA 120
>sp|P75896|YCDK_ECOLI HYPOTHETICAL 13.8 KD PROTEIN IN WRBA-PUTA INTERGENIC REGION
>gi|7429319|pir||H64842 probable translation initiation
regulator b1010 - Escherichia coli
>gi|1787245|gb|AAC74095.1| (AE000202) orf, hypothetical
protein [Escherichia coli K12]
>gi|4062564|dbj|BAA35777.1| (D90737) Hypothetical
protein 1 (vnfA 5' region) [Escherichia coli]
>gi|4062573|dbj|BAA35787.1| (D90738) Hypothetical
protein 1 (vnfA 5' region) [Escherichia coli]
Length = 128
Score = 83.1 bits (202), Expect = 1e-15
Identities = 37/125 (29%), Positives = 68/125 (53%)
Query: 1 MAKEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIK 60
M K VI + P+ P+ ++V+G + D + D K QT+ V+E I+
Sbjct: 1 MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIR 60
Query: 61 AILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEM 120
++E AG ++ DV ++++ D ++A +NE+Y+E+F KPAR ++ + D L+E+
Sbjct: 61 KVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEI 120
Query: 121 EAIAY 125
IA+
Sbjct: 121 ATIAH 125
>gb|AAF03490.1| (U93363) YjgF-like protein [Pseudomonas pseudoalcaligenes]
Length = 142
Score = 78.8 bits (191), Expect = 2e-14
Identities = 36/117 (30%), Positives = 67/117 (56%), Gaps = 1/117 (0%)
Query: 6 IFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILEE 65
I ++ P P Y+ ++ G +FV+G + +DP G ++ G ++ QT++++ N + + E
Sbjct: 16 IRSQSLPAPHFSYTPVVRAGGCVFVSGLVALDPVLGTLINGGMEAQTRQILNNFERLSAE 75
Query: 66 AGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGES-KPARVAVEVSRLPKDVLIEME 121
L+ ++ +Y D F+ +N+V+ E+F E PAR +V VS LP L+E+E
Sbjct: 76 LELGLDQLMLARIYCADFAQFSAINQVWEEFFSERIPPARTSVGVSALPLGALVEIE 132
>pir||T35965 conserved hypothetical protein SC9C7.14c - Streptomyces coelicolor
>gi|4154073|emb|CAA22726.1| (AL035161) conserved
hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 132
Score = 67.5 bits (162), Expect = 5e-11
Identities = 39/120 (32%), Positives = 71/120 (58%), Gaps = 6/120 (5%)
Query: 11 APKPIGPYSQAIKV----GNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILEEA 66
AP+ + P +Q V G F+ V+GQ+ +D + + +GD Q ++V EN++ L A
Sbjct: 9 APEGVAPAAQYTHVVLGTGRFVAVSGQLALDEDGKVVGEGDPAAQARQVFENLRRCLASA 68
Query: 67 GASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESK-PARVAVEVSRLPK-DVLIEMEAIA 124
GA+ +DVVK+T ++ D+ + + +E+ + + PA AV+V+ L + + L+E+EA A
Sbjct: 69 GAAFDDVVKLTFFVTDMANMGAIRAARAEHIPDDRLPAASAVQVAALVRPEFLMEIEAFA 128
>gi|11424938 translational inhibitor protein p14.5 [Homo sapiens]
Length = 76
Score = 67.1 bits (161), Expect = 7e-11
Identities = 32/63 (50%), Positives = 43/63 (67%)
Query: 62 ILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEME 121
IL+ AG +VVK TV L D+NDF +NE+Y +YF + PAR A +V+ LPK IE+E
Sbjct: 4 ILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIEIE 63
Query: 122 AIA 124
A+A
Sbjct: 64 AVA 66
>pir||C70531 hypothetical protein Rv2704 - Mycobacterium tuberculosis (strain
H37RV) >gi|2181995|emb|CAB09464.1| (Z96072) hypothetical
protein Rv2704 [Mycobacterium tuberculosis]
Length = 142
Score = 66.7 bits (160), Expect = 9e-11
Identities = 39/109 (35%), Positives = 66/109 (59%), Gaps = 9/109 (8%)
Query: 18 YSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILEEAGASLNDVVKVT 77
YS+A+++G + VAG TG DI QT+ + I+ L +AGA+L DVV+
Sbjct: 20 YSRAVRIGPLVVVAGT------TGS--GDDIAAQTRDALRRIEIALGQAGATLADVVRTR 71
Query: 78 VYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRL-PKDVLIEMEAIAY 125
+Y+ D++ + ++ EV+++ FG+ +P VEV+ L +L+E+EA AY
Sbjct: 72 IYVTDISRWREVGEVHAQAFGKIRPVTSMVEVTALIAPGLLVEIEADAY 120
>pir||A75567 conserved hypothetical protein - Deinococcus radiodurans (strain
R1) >gi|6457694|gb|AAF09626.1|AE001867_1 (AE001867)
conserved hypothetical protein [Deinococcus radiodurans]
Length = 157
Score = 66.7 bits (160), Expect = 9e-11
Identities = 43/110 (39%), Positives = 66/110 (59%), Gaps = 6/110 (5%)
Query: 18 YSQAIKVGNFIFVAGQIPIDPETGEIVK-GDIKEQTKRVIENIKAILEEAGASLNDVVKV 76
YS+A++VGN + VAG GE+V GD QTK + I+ LE+AGA L DVV+
Sbjct: 45 YSRAVRVGNIVQVAGTTAT--VDGEVVGVGDAYWQTKVALGLIRQALEQAGARLEDVVRT 102
Query: 77 TVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRL--PKDVLIEMEAIA 124
+Y+ D++ + ++ + E FG +PA V+V+ L P+ L+E+EA A
Sbjct: 103 RMYVPDISRWEQVGRAHGEVFGAIRPAATMVQVAALIDPRH-LVEIEAEA 151
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.314 0.135 0.362
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43175355
Number of Sequences: 2977
Number of extensions: 1616258
Number of successful extensions: 5025
Number of sequences better than 1.0e-10: 60
Number of HSP's better than 0.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 4938
Number of HSP's gapped (non-prelim): 60
length of query: 127
length of database: 189,106,746
effective HSP length: 58
effective length of query: 69
effective length of database: 154,394,500
effective search space: 10653220500
effective search space used: 10653220500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (21.9 bits)
S2: 160 (66.7 bits)