BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0827 (PAB0827) DE:GALACTOSYLTRANSFERASE or LPS BIOSYNTHESIS
RFBU RELATED PROTEIN
(371 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75033 probable hexosyltransferase (EC 2.4.1.-) PAB0827 [si... 730 0.0
pir||F71196 probable hexosyltransferase (EC 2.4.1.-) PH1844 - Py... 324 7e-88
gi|11499317 galactosyltransferase [Archaeoglobus fulgidus] >gi|7... 168 7e-41
pir||D72511 probable hexosyltransferase (EC 2.4.1.-) APE2066 [si... 155 9e-37
pir||A75059 probable hexosyltransferase (EC 2.4.1.-) PAB0973 [si... 151 1e-35
pir||F64500 probable hexosyltransferase (EC 2.4.1.-) MJ1607 - Me... 138 8e-32
pir||C69098 probable hexosyltransferase (EC 2.4.1.-) MTH173 - Me... 126 5e-28
pir||H64446 probable hexosyltransferase (EC 2.4.1.-) MJ1178 [sim... 122 5e-27
gi|11498225 LPS biosynthesis protein, putative [Archaeoglobus fu... 122 7e-27
pir||T40367 n-acetylglucosaminyl-phosphatidylinositol - fission ... 121 1e-26
pir||C72340 probable hexosyltransferase (EC 2.4.1.-) TM0744 - Th... 120 2e-26
pir||C70859 probable hexosyltransferase (EC 2.4.1.-) Rv3032 [sim... 120 3e-26
pir||T20374 hypothetical protein D2085.6 - Caenorhabditis elegan... 120 3e-26
pir||G75007 lps biosynthesis rfbu related protein PAB1301 - Pyro... 120 3e-26
sp|P37287|PIGA_HUMAN N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL B... 119 4e-26
pir||A55731 GPI-anchor biosynthesis protein PIG-A - mouse >gi|74... 119 6e-26
pir||S77553 probable hexosyltransferase (EC 2.4.1.-) sll1971 [si... 118 1e-25
emb|CAB70927.1| (AL137778) putative sugar transferase [Streptomy... 115 9e-25
pir||E72354 probable hexosyltransferase (EC 2.4.1.-) TM0622 - Th... 115 1e-24
gb|AAF57802.1| (AE003802) CG6401 gene product [Drosophila melano... 113 3e-24
gb|AAF76891.1| (AF267484) PIG-A [Paramecium tetraurelia] 112 8e-24
emb|CAB09632.1| (Z96801) hypothetical protein MLCL581.14c [Mycob... 111 1e-23
dbj|BAB05134.1| (AP001512) unknown conserved protein in others [... 111 2e-23
gb|AAF14309.1| (U45308) SqdX [Synechococcus PCC7942] 108 9e-23
pir||T47450 n-acetylglucosaminyl-phosphatidylinositol-like prote... 108 1e-22
pir||T34839 probable hexosyltransferase (EC 2.4.1.-) SC2G5.06 [s... 107 2e-22
pir||C71154 hypothetical protein PH0434 - Pyrococcus horikoshii ... 107 3e-22
pir||T35514 probable glycosyl transferase - Streptomyces coelico... 107 3e-22
gi|9755344 N-acetylglucosaminyl-phosphatidylinositol biosyntheti... 106 3e-22
pir||D70351 probable hexosyltransferase (EC 2.4.1.-) aq_572 [sim... 105 7e-22
pir||S75454 hypothetical protein slr1508 - Synechocystis sp. (st... 104 1e-21
emb|CAB43611.1| (AJ239004) galactosyl transferase [Streptococcus... 104 1e-21
pir||S65187 GPI-anchor biosynthesis protein PIG-A - yeast (Sacch... 103 3e-21
prf||1804343A SPT14 gene [Saccharomyces cerevisiae] 103 3e-21
pir||G75058 probable hexosyltransferase (EC 2.4.1.-) PAB1410 [si... 101 1e-20
gb|AAG19463.1| (AE005039) Vng1059c [Halobacterium sp. NRC-1] 100 2e-20
dbj|BAB06407.1| (AP001516) alpha-D-mannose-alpha(1-6)phosphatidy... 100 3e-20
pir||A70571 probable hexosyltransferase (EC 2.4.1.-) Rv2610c [si... 100 3e-20
pir||S28485 lipopolysaccharide biosynthesis protein RfbV VC0259 ... 99 1e-19
emb|CAA69126.1| (Y07788) RfbV [Vibrio cholerae] 99 1e-19
pir||C72590 probable hexosyltransferase (EC 2.4.1.-) APE1191 [si... 98 2e-19
emb|CAA18697.1| (AL022602) hypothetical protein MLCB268.31c [Myc... 96 5e-19
emb|CAB93438.1| (AL357591) putative glycosyl transferase [Strept... 96 5e-19
dbj|BAB07095.1| (AP001518) lipopolysaccharide biosynthesis [Baci... 96 8e-19
pir||F70346 mannosyltransferase C - Aquifex aeolicus >gi|2983151... 96 8e-19
emb|CAB50741.1| (AJ243803) putative glycosyl transferase [Strept... 96 8e-19
gb|AAB84956.1| (AE000829) LPS biosynthesis RfbU related protein ... 94 2e-18
pir||H69158 LPS biosynthesis RfbU related protein - Methanobacte... 94 2e-18
pir||I76777 Mannosyltransferase (EC 5.-.-.-) C - Escherichia col... 93 4e-18
pir||A82265 probable polysaccharide biosynthesis protein VC0925 ... 93 5e-18
pir||F70937 hypothetical protein Rv2188c - Mycobacterium tubercu... 92 7e-18
dbj|BAA28305.1| (AB009327) mannosyl transferase [Escherichia coli] 92 7e-18
gb|AAB08106.1| (U68035) HepB [Anabaena sp.] 92 9e-18
dbj|BAA28289.1| (AB009319) mannosyl transferase [Escherichia col... 92 9e-18
dbj|BAA28303.1| (AB009326) mannosyl transferase [Escherichia coli] 92 9e-18
emb|CAB57789.1| (AJ250131) HepD protein [Anabaena PCC7120] 92 9e-18
dbj|BAA28297.1| (AB009323) mannosyl transferase [Escherichia col... 91 2e-17
pir||T45962 hypothetical protein F7J8.200 - Arabidopsis thaliana... 91 2e-17
pir||S22619 hypothetical protein 17.9 - Salmonella choleraesuis ... 90 3e-17
dbj|BAA23228.1| (AB000126) mannosyl transferase [Klebsiella pneu... 90 3e-17
pir||S74765 mannosyltransferase B - Synechocystis sp. (strain PC... 90 4e-17
sp|P42982|YPJH_BACSU HYPOTHETICAL 42.0 KDA PROTEIN IN DAPB-PAPS ... 90 4e-17
gb|AAK42865.1| Glycosyltransferase, putative [Sulfolobus solfata... 90 5e-17
gb|AAG18689.1| (AE004974) LPS biosynthesis; RfbU1 [Halobacterium... 89 8e-17
emb|CAC11484.1| (AL445064) conserved hypothetical protein [Therm... 89 8e-17
pir||S51264 probable galactosyltransferase trsE - Yersinia enter... 89 1e-16
gb|AAF04385.1|AF189151_8 (AF189151) WbdC; mannosyl transferase C... 88 1e-16
pir||S76544 hypothetical protein - Synechocystis sp. (strain PCC... 88 1e-16
pir||F69142 probable hexosyltransferase (EC 2.4.1.-) MTH332 [sim... 88 1e-16
pir||S76126 hypothetical protein - Synechocystis sp. (strain PCC... 88 2e-16
pir||S75523 mannosyltransferase B - Synechocystis sp. (strain PC... 87 2e-16
pir||D69143 LPS biosynthesis RfbU related protein - Methanobacte... 87 2e-16
gb|AAA92877.1| (L38424) unknown [Bacillus subtilis] 87 3e-16
pir||F70441 capsular polysaccharide biosynthsis protein - Aquife... 87 3e-16
gb|AAC98618.1| (AF047478) mannosyltransferase; WbkA [Brucella me... 87 3e-16
pir||A82964 glycosyltransferase WbpZ PA5447 [imported] - Pseudom... 87 3e-16
pir||S77338 LPS glycosyltransferase icsA - Synechocystis sp. (st... 87 4e-16
sp|P39862|CAPM_STAAU CAPM PROTEIN >gi|506709|gb|AAA64652.1| (U10... 86 5e-16
pir||I76776 Mannosyltransferase (EC 5.-.-.-) B - Escherichia col... 85 9e-16
gb|AAC38772.1| (AF010183) glycosyltransferase WbpZ [Pseudomonas ... 85 9e-16
gb|AAF04384.1|AF189151_7 (AF189151) WbdB; mannosyl transferase B... 85 9e-16
emb|CAB91117.1| (AL355913) putative glycosyl transferase [Strept... 85 9e-16
gb|AAG18700.1| (AE004975) LPS biosynthesis protein; Lpb [Halobac... 85 9e-16
pir||C75423 probable mannosyltransferase - Deinococcus radiodura... 85 1e-15
pir||T44601 probable glycosyltransferase [imported] - Rhizobium ... 85 2e-15
pir||F72257 lipopolysaccharide biosynthesis protein-related prot... 85 2e-15
pir||H83539 probable glycosyl transferase PA0842 [imported] - Ps... 84 2e-15
gb|AAD46732.1|AF078736_12 (AF078736) putative glycosyl transfera... 84 2e-15
dbj|BAB05402.1| (AP001512) unknown conserved protein [Bacillus h... 84 3e-15
pir||E71699 capm protein (capM2) RP414 - Rickettsia prowazekii >... 84 3e-15
gi|11497665 mannosyltransferase A (mtfA) [Archaeoglobus fulgidus... 83 4e-15
pir||C82750 mannosyltransferase XF0887 [imported] - Xylella fast... 83 4e-15
gi|11497939 conserved hypothetical protein [Archaeoglobus fulgid... 83 5e-15
gb|AAG18698.1| (AE004975) LPS glycosyltransferase; Lpg [Halobact... 83 6e-15
gb|AAK42884.1| Glycosyltransferase, putative [Sulfolobus solfata... 82 8e-15
pir||S77339 hypothetical protein sll1723 - Synechocystis sp. (st... 82 8e-15
pir||B83264 hypothetical protein PA3059 [imported] - Pseudomonas... 82 8e-15
pir||H69147 LPS biosynthesis RfbU related protein - Methanobacte... 82 1e-14
gi|11497659 conserved hypothetical protein [Archaeoglobus fulgid... 81 2e-14
emb|CAC04040.1| (AL391406) putative transferase [Streptomyces co... 80 3e-14
pir||E69050 GlcNAc-phosphatidylinositol related biosynthetic pro... 80 3e-14
pir||B70610 hypothetical protein Rv1212c - Mycobacterium tubercu... 80 4e-14
pir||H70548 hypothetical protein Rv0557 - Mycobacterium tubercul... 80 4e-14
gb|AAG19109.1| (AE005009) Vng0598c [Halobacterium sp. NRC-1] 79 7e-14
dbj|BAB18471.1| (AB033991) BtrM [Bacillus circulans] 79 7e-14
pir||E69727 biosynthesis of teichuronic acid tuaC - Bacillus sub... 79 9e-14
pir||E81824 alpha 1,2 N-acetylglucosamine transferase NMA1959 [i... 79 9e-14
dbj|BAB03209.1| (AB046360) putative glycosyltransferase [Actinob... 78 1e-13
sp|P46915|CTSA_BACSU SPORE COAT PROTEIN SA >gi|7427927|pir||A700... 78 2e-13
pir||H83019 probable glycosyl transferase PA5004 [imported] - Ps... 78 2e-13
emb|CAB63280.1| (AJ251713) mannosyltransferase-like protein [Yer... 77 3e-13
pir||S70682 glycosyltransferase homolog - Bordetella pertussis >... 77 4e-13
emb|CAB63299.1| (AJ251712) mannosyltransferase-like protein [Yer... 77 4e-13
dbj|BAB07431.1| (AP001519) unknown conserved protein [Bacillus h... 77 4e-13
pir||T44785 glycosyltransferase homolog [imported] - Bordetella ... 76 5e-13
dbj|BAB07382.1| (AP001519) lipopolysaccharide biosynthesis [Baci... 76 5e-13
sp|Q46638|AMSK_ERWAM AMYLOVORAN BIOSYNTHESIS PROTEIN AMSK >gi|10... 76 6e-13
emb|CAB75373.1| (AL139298) putative transferase [Streptomyces co... 76 6e-13
pir||C81053 alpha-1,2-N-acetylglucosamine transferase NMB1705 [i... 76 6e-13
gb|AAC45156.1| (U39810) LPS glycosyltransferase IcsA [Neisseria ... 75 1e-12
pir||S74778 hypothetical protein slr1077 - Synechocystis sp. (st... 75 1e-12
sp|Q9R9N1|LPSE_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS GLYCOS... 75 1e-12
emb|CAC12195.1| (AL445066) N-acetylglucosaminyl-phosphatidylinos... 75 1e-12
gb|AAC38771.1| (AF010182) glycosyltransferase WbpY [Pseudomonas ... 75 2e-12
pir||T35150 probable glycosyl transferase - Streptomyces coelico... 75 2e-12
pir||B82964 glycosyltransferase WbpY PA5448 [imported] - Pseudom... 75 2e-12
dbj|BAB07099.1| (AP001518) glycosyl transferase (lipopolysacchar... 74 2e-12
gb|AAC44373.1| (U37258) GDP-mannose:cellobiosyl-diphosphopolypre... 74 2e-12
pir||T44332 hypothetical protein wblE [imported] - Vibrio choler... 74 2e-12
sp|Q48453|YC07_KLEPN HYPOTHETICAL 41.2 KD PROTEIN IN CPS REGION ... 74 3e-12
pir||A75597 mannosyltransferase - Deinococcus radiodurans (strai... 73 4e-12
pir||D83107 conserved hypothetical protein PA4311 [imported] - P... 73 4e-12
gb|AAD43836.1|AF076290_6 (AF076290) putative mannosyltransferase... 73 5e-12
pir||T46662 alpha 1,2 N-acetylglucosamine transferase [imported]... 72 9e-12
sp|Q11152|Y486_MYCTU HYPOTHETICAL 50.5 KDA PROTEIN RV0486 >gi|74... 72 9e-12
pir||C70036 capsular polysaccharide biosynthesis homolog yveN - ... 72 9e-12
sp|P71243|WCAL_ECOLI PUTATIVE COLANIC ACID BIOSYNTHESIS GLYCOSYL... 72 9e-12
pir||C72354 conserved hypothetical protein - Thermotoga maritima... 72 1e-11
emb|CAB58332.1| (AL121855) putative transferase [Streptomyces co... 72 1e-11
sp|P54490|YQGM_BACSU HYPOTHETICAL 40.8 KDA PROTEIN IN SODA-COMGA... 71 2e-11
pir||E70346 mannosyltransferase B - Aquifex aeolicus >gi|2983150... 71 2e-11
pir||B71691 capm protein (capM1) RP344 - Rickettsia prowazekii >... 71 2e-11
dbj|BAA25653.1| (AB005901) deduced glucosyltransferase [Streptom... 71 3e-11
pir||C71153 hypothetical protein PH0426 - Pyrococcus horikoshii ... 71 3e-11
gb|AAF23992.1| (AF035937) WbpU [Pseudomonas aeruginosa] 71 3e-11
dbj|BAB06024.1| (AP001515) lipopolysaccharide N-acetylglucosamin... 71 3e-11
emb|CAB57276.1| (X77725) PIG-A [Homo sapiens] 70 5e-11
pir||A82676 conserved hypothetical protein XF1470 [imported] - X... 69 6e-11
sp|O68547|LPCC_RHILV LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS MANNOS... 69 8e-11
gb|AAC69662.1| (AF019745) WaaD [Escherichia coli] 69 8e-11
>pir||A75033 probable hexosyltransferase (EC 2.4.1.-) PAB0827 [similarity] -
Pyrococcus abyssi (strain Orsay)
>gi|5458671|emb|CAB50158.1| (AJ248287)
GALACTOSYLTRANSFERASE or LPS BIOSYNTHESIS RFBU RELATED
PROTEIN [Pyrococcus abyssi]
Length = 371
Score = 730 bits (1864), Expect = 0.0
Identities = 371/371 (100%), Positives = 371/371 (100%)
Query: 1 MESLKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDL 60
MESLKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDL
Sbjct: 1 MESLKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDL 60
Query: 61 IKVPGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVT 120
IKVPGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVT
Sbjct: 61 IKVPGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVT 120
Query: 121 NHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGVN 180
NHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGVN
Sbjct: 121 NHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGVN 180
Query: 181 IERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFVEGKLTIVGDGSMRKVLKMQAKK 240
IERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFVEGKLTIVGDGSMRKVLKMQAKK
Sbjct: 181 IERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFVEGKLTIVGDGSMRKVLKMQAKK 240
Query: 241 LGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIP 300
LGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIP
Sbjct: 241 LGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIP 300
Query: 301 EIIGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY 360
EIIGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY
Sbjct: 301 EIIGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY 360
Query: 361 RGELGDSDTNV 371
RGELGDSDTNV
Sbjct: 361 RGELGDSDTNV 371
>pir||F71196 probable hexosyltransferase (EC 2.4.1.-) PH1844 - Pyrococcus
horikoshii >gi|3258282|dbj|BAA30965.1| (AP000007) 381aa
long hypothetical protein [Pyrococcus horikoshii]
Length = 381
Score = 324 bits (823), Expect = 7e-88
Identities = 181/374 (48%), Positives = 246/374 (65%), Gaps = 14/374 (3%)
Query: 1 MESLKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDL 60
M +KIALVSDWY+PKIGGVA H+HNLAI LR+ GHEV IVTN GKE EL++YGI+L
Sbjct: 1 MVGMKIALVSDWYYPKIGGVATHMHNLAIKLRERGHEVGIVTNNRPTGKEEELKRYGIEL 60
Query: 61 IKVPGLIKD--GINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTL 118
IK+PG+I +NL+ KSS L E+LK FD++H+ HAFTPLSLK++ AG + TL
Sbjct: 61 IKIPGIISPFLDVNLTYGLKSSEELNEFLKDFDIIHSHHAFTPLSLKALKAGKNMEKGTL 120
Query: 119 VTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNG 178
+T HS+ F + S L + FK YL I VSKA+ SF+ FT+ P++ +PNG
Sbjct: 121 LTTHSISFAHESKLWDTLGFTIPLFKSYLKYSHRIIAVSKAAKSFIEHFTSVPVLIVPNG 180
Query: 179 VNIER-FNGRGRE-----WGTRN--ILYVGRLEPRKGVNYLISAM-KFVEGKLTIVGDGS 229
V+ ER F R +E +G +LYV R+ RKG + L++A K + L +VG+G
Sbjct: 181 VDDERFFPARDKEKIKAKFGLEGNVVLYVSRMSYRKGPHVLLNAFSKIEDATLVMVGNGE 240
Query: 230 MRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSL-SEAFGIVLLEAMASE 288
M LK Q K LG+E+KV F+G++ + L +++ ++VFVLPS+ SEAFGIV+LEAMAS
Sbjct: 241 MLPFLKAQTKFLGIENKVVFMGYVPDDILPEVFRMADVFVLPSISSEAFGIVILEAMASG 300
Query: 289 VPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERL 346
VP+I T VGGIPE+I AG++VPP + L AI +L N++ K G GR+ VE
Sbjct: 301 VPIIATDVGGIPEVIKENSAGLLVPPGNELKLREAIEKLLKNEELRKWYGNNGRRSVEEK 360
Query: 347 YSWDVVAERTERLY 360
YSW+ + + ER+Y
Sbjct: 361 YSWNKIVVKIERIY 374
>gi|11499317 galactosyltransferase [Archaeoglobus fulgidus]
>gi|7433881|pir||G69465 probable hexosyltransferase (EC
2.4.1.-) AF1728 - Archaeoglobus fulgidus
>gi|2648819|gb|AAB89517.1| (AE000983)
galactosyltransferase [Archaeoglobus fulgidus]
Length = 356
Score = 168 bits (422), Expect = 7e-41
Identities = 120/365 (32%), Positives = 184/365 (49%), Gaps = 21/365 (5%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKV 63
+K+ L+S ++ P IGGV +HV +A HL + G EV +VT+ +G+E K+ + V
Sbjct: 1 MKVVLLSSYFPPHIGGVEVHVERIAHHLHRRGFEVVVVTST-ASGRE----KFPFRVEYV 55
Query: 64 PGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHS 123
P + I S I +E + G D+ H+ H P S+ V
Sbjct: 56 PSI---PIPYSPITPFLGRFLEKIDG-DIFHS-HTPPPFFSCSLRKSPHVITYHCDIEIP 110
Query: 124 VEFENFSILNGFSKM----SYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGV 179
++ F I SK+ + L + + +K+ R IPNG+
Sbjct: 111 EKYGRFPIPRALSKLIIRRTDDMLSEALDRADAIVATTKSYAETSRLLAGRDYHVIPNGI 170
Query: 180 NIERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFV--EGKLTIVGDGSMRKVLKMQ 237
+ F G E +L++GRL KGV+ L+ AMK V E + I+GDG R L+
Sbjct: 171 ELSEFEGVEAE-KEPTVLFLGRLAATKGVDVLLKAMKHVDVEARCVIIGDGEERSSLERL 229
Query: 238 AKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLS--EAFGIVLLEAMASEVPVIGTS 295
A++L V EF GF+ ++++I ++ + VLPSLS EAFGIVLLEAMA PV +
Sbjct: 230 ARELEVN--AEFTGFLPRKKVIEYLSRASLLVLPSLSRLEAFGIVLLEAMACGTPVAASD 287
Query: 296 VGGIPEIIGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAER 355
+ G+ ++ +AG + PP D L+ IN +LS+++ K +G+ GR+ V YSWDVV +
Sbjct: 288 LPGVRDVASEAGFVFPPGDYMRLSEIINEVLSDERKVKAIGESGRRIVREKYSWDVVVKS 347
Query: 356 TERLY 360
RLY
Sbjct: 348 LIRLY 352
>pir||D72511 probable hexosyltransferase (EC 2.4.1.-) APE2066 [similarity] -
Aeropyrum pernix (strain K1) >gi|5105764|dbj|BAA81076.1|
(AP000063) 392aa long hypothetical
N-acetylglucosaminyl-phosphatidylinositol biosynthetic
protein [Aeropyrum pernix]
Length = 392
Score = 155 bits (387), Expect = 9e-37
Identities = 110/366 (30%), Positives = 183/366 (49%), Gaps = 12/366 (3%)
Query: 5 KIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVP 64
+I +V D++ +GGV HV +L L+ G++V IV+ AL G +L+ G ++K P
Sbjct: 21 RIVMVMDFHPSSVGGVQSHVRDLTRLLQDFGYDVVIVSRALGKGDVKDLEAEGHYIVK-P 79
Query: 65 GLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSV 124
+ I + +E LK DVVH+ H +T SL ++ A +G + TNHS+
Sbjct: 80 LFPLEIIFVPPDPSDLRREIESLKP-DVVHSHHIYTLTSLLALKAARDLGLPRIATNHSI 138
Query: 125 EFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVE--IPNGVNIE 182
+ + L + I VS A+ + + IPNGV++E
Sbjct: 139 FLAYDKVALWRIASIVLPTRYLLPNAQAVISVSTAADKMVEGIVGDSVDRYIIPNGVDVE 198
Query: 183 RFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFV-----EGKLTIVGDGSMRKVLKMQ 237
RF + +L++GRL RKG + L+ A + V + KL I G G ++K+
Sbjct: 199 RFKPSTPKADYPLVLFLGRLVWRKGAHVLVRAFRHVVDEIRDAKLYIGGKGEFEPIIKLL 258
Query: 238 AKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSL-SEAFGIVLLEAMASEVPVIGTSV 296
+ G+E+ V+ LG + + E LY + V +PS+ +E+FGIV LE+++S PV+ +
Sbjct: 259 IARYGLENNVKMLGVVPESEKPSLYSSAWVTAVPSIVNESFGIVALESLSSGTPVVASRQ 318
Query: 297 GGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAE 354
GG+ +++ G G++V P SK LA A+ +L + KR+ + RK V Y W V
Sbjct: 319 GGLKDVVKHGKTGLLVKPGSSKELAKALITLLQDSGLRKRMSEEARKIVLERYDWRKVVP 378
Query: 355 RTERLY 360
+ ++Y
Sbjct: 379 QILKVY 384
>pir||A75059 probable hexosyltransferase (EC 2.4.1.-) PAB0973 [similarity] -
Pyrococcus abyssi (strain Orsay)
>gi|5458879|emb|CAB50366.1| (AJ248287) LPS BIOSYNTHESIS
RFBU RELATED PROTEIN [Pyrococcus abyssi]
Length = 390
Score = 151 bits (377), Expect = 1e-35
Identities = 119/385 (30%), Positives = 194/385 (49%), Gaps = 35/385 (9%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKV 63
+K+ +++ +++P+ GG+ + + +A L + G EV ++T + L+ GI++I++
Sbjct: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLE--GIEVIRL 58
Query: 64 -PGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNH 122
P I +S V + F V++A H P N V + T
Sbjct: 59 APHFIVSNTPISFNLPLKLIKVFKEEQFSVINA-HTPVPYYADVSAWVNNVLKGSNKTPF 117
Query: 123 SVEFENFSILNGF--SKMSYSY-FKMYLGQVKVGIGVSKASV------SFLRKFTNAPIV 173
+ + N + GF K++Y Y + G + + + S LR+F ++
Sbjct: 118 VLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKK-LI 176
Query: 174 EIPNGVNIER-FNGRGREW--------GTRNILYVGRLE---PRKGVNYLISAMKFV--- 218
IP GV+ ER F G+ + ++++G + KGV YL+ A K+V
Sbjct: 177 WIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQ 236
Query: 219 --EGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPS--LS 274
+ L +VG G M K LG+ +V F G++ ++ L Y+ S+V VLPS +
Sbjct: 237 VKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQ 296
Query: 275 EAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTA 332
E FG+VL+EA AS PVIGT+VGGI +I G GI+VPP+D LA AI +L++ A
Sbjct: 297 EGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLA 356
Query: 333 KRLGKLGRKRVERLYSWDVVAERTE 357
+++GK GR+ VER YSWD + E+TE
Sbjct: 357 RKIGKTGRRLVEREYSWDKIVEKTE 381
>pir||F64500 probable hexosyltransferase (EC 2.4.1.-) MJ1607 - Methanococcus
jannaschii >gi|1500505|gb|AAB99629.1| (U67601) LPS
biosynthesis protein, putative [Methanococcus
jannaschii]
Length = 390
Score = 138 bits (345), Expect = 8e-32
Identities = 126/388 (32%), Positives = 194/388 (49%), Gaps = 36/388 (9%)
Query: 4 LKIALVSDWYFPKI-GGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQK---YGID 59
+KIA+V+ Y P+I GG+AIH LA L + GHEV ++T + + Y +
Sbjct: 1 MKIAMVTWEYPPRIVGGLAIHCKGLAEGLVRNGHEVDVITVGYDLPEYENINGVNVYRVR 60
Query: 60 LIKVPGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQH---AFTPLSLKSIPAGNKVGAL 116
I P + + ++ + ++ K +DV+H F +LK I V ++
Sbjct: 61 PISHPHFLTWAMFMAEEMEKKLGILGVDK-YDVIHCHDWMTHFVGANLKHICRMPYVQSI 119
Query: 117 TLVTNHSVEFENFS-ILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAP---I 172
HS E + + SK ++ + + I VSK+ + N P +
Sbjct: 120 -----HSTEIGRCGGLYSDDSKAIHAMEYLSTYESCQVITVSKSLKEEVCSIFNTPEDKV 174
Query: 173 VEIPNGVNI----------ERFNGR---GREWGTRNILYVGRLEPRKGVNYLISAM-KFV 218
I NG+N E+ N R G + + IL+VGRL +KG+ YLI AM K +
Sbjct: 175 KVIYNGINPWEFDINLSWEEKINFRRSIGVQDDEKMILFVGRLTYQKGIEYLIRAMPKIL 234
Query: 219 E---GKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSE 275
E KL I G G MR L+ +LGV KV FLGF++ + L LYK ++V V+PS+ E
Sbjct: 235 ERHNAKLVIAGSGDMRDYLEDLCYQLGVRHKVVFLGFVNGDTLKKLYKSADVVVIPSVYE 294
Query: 276 AFGIVLLEAMASEVPVIGTSVGGIPEIIGDA--GIIVPPRDSKALANAINAILSNQKTAK 333
FGIV LEAMA+ PV+ +SVGG+ EII GI V P++ ++A ++ +LS+ +
Sbjct: 295 PFGIVALEAMAAGTPVVVSSVGGLMEIIKHEVNGIWVYPKNPDSIAWGVDRVLSDWGFRE 354
Query: 334 RLGKLGRKRVERLYSWDVVAERTERLYR 361
+ +K V YSWD +A+ T +Y+
Sbjct: 355 YIVNNAKKDVYEKYSWDNIAKETVNVYK 382
>pir||C69098 probable hexosyltransferase (EC 2.4.1.-) MTH173 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621216|gb|AAB84679.1| (AE000805) LPS biosynthesis
RfbU related protein [Methanobacterium
thermoautotrophicum]
Length = 382
Score = 126 bits (313), Expect = 5e-28
Identities = 114/378 (30%), Positives = 181/378 (47%), Gaps = 24/378 (6%)
Query: 1 MESLKIALVSDWYFPKI-GGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGID 59
M ++I +VSD++ P GG +A L + GH V +++ + E E + G+
Sbjct: 1 MGPMRILIVSDFFVPHYNGGGERRYFEIARRLVERGHVVDVISMGIHGVGEYE-EVSGVR 59
Query: 60 L------IKVPGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKV 113
+ I+ P L + +A + ++ + +D++ AQ + PL L + A
Sbjct: 60 VHHLGPRIRKPPLRGPLDFIRFMAAAFRWVMTH--DYDIIDAQ-TYAPL-LPAFLASRIH 115
Query: 114 GALTLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVG-IGVSKASVSFLRKFTNAP- 171
G + T H V + SK + ++ + G I VS+++ S L +
Sbjct: 116 GTPMVATIHDVSSAHGDQWLQSSKTATILERVLMRLPYDGVITVSRSTASALTELHGRNP 175
Query: 172 --IVEIPNGVNIERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMK-----FVEGKLTI 224
I IPNGV+ E + G I++VGRL P K V++LI F + +L I
Sbjct: 176 DGIHIIPNGVDPELIDSVTPATGNY-IIFVGRLAPHKHVDHLIEVFSKLVIDFPDLRLEI 234
Query: 225 VGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEA 284
+GDG R LK + G+ D V F +S E+I + + V VLPS E FG+VL EA
Sbjct: 235 IGDGVERARLKAMVDECGIRDSVTFHHNLSYPEVISRIRGARVLVLPSTREGFGMVLAEA 294
Query: 285 MASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKR 342
A VP + GG+ E+I G+ G +V P D +AL + I ++S+ + R+G GRK+
Sbjct: 295 GACGVPAVAYRSGGVVEVIDDGENGFLVEPCDKEALHDKIKLLISDDELRDRMGSQGRKK 354
Query: 343 VERLYSWDVVAERTERLY 360
VE + WD V + ER Y
Sbjct: 355 VEEEFIWDRVVDEVERTY 372
>pir||H64446 probable hexosyltransferase (EC 2.4.1.-) MJ1178 [similarity] -
Methanococcus jannaschii >gi|1591805|gb|AAB99181.1|
(U67559) conserved hypothetical protein [Methanococcus
jannaschii]
Length = 351
Score = 122 bits (304), Expect = 5e-27
Identities = 108/363 (29%), Positives = 171/363 (46%), Gaps = 22/363 (6%)
Query: 8 LVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPGLI 67
L+ Y+P IGG+ +HV NL L+ + + LT E + + + VP L
Sbjct: 7 LMPSIYYPYIGGITLHVENLVKRLKDIEFHI------LTYDSYEENEYKNVIIHNVPHLK 60
Query: 68 K-DGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEF 126
K GI+ + A + +G D++H+ +AF P NK+ ++T H
Sbjct: 61 KFRGISYLINAYKIGKNIIESEGIDLIHSHYAF-PQGCVGALLKNKLSIPHILTLHG--- 116
Query: 127 ENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGVNIE-RFN 185
+ IL K Y +FK I VSK + L + + I NGVN E +N
Sbjct: 117 SDALILKNSIKGRY-FFKYATTNSDKIICVSKYIKNQLDENLKNRAIVIYNGVNKEILYN 175
Query: 186 GRGREWGTRNILYVGRLEPRKGVNYLISAMKFVEGKLTIVGDGSMRKVLKMQAKKLGVED 245
+G L+VG P+KGV+ LI A+K ++ ++GDG + K ++ K +
Sbjct: 176 EGDYNFG----LFVGAFVPQKGVDILIDAIKDIDFNFKLIGDGKLYKKIENFVVKNNLSH 231
Query: 246 KVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGD 305
+E LG S +E+ +K V+PS SE FG+V +E MA PVI T VGG+ EI+ D
Sbjct: 232 -IELLGRKSFDEVASFMRKCSFLVVPSRSEGFGMVAVEGMACSKPVIATRVGGLGEIVID 290
Query: 306 A--GIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGE 363
G++ + L I +++N++ K LG+ G K + +SW+ ++Y E
Sbjct: 291 GYNGLLAEKNNPNDLKEKILELINNEELRKTLGENG-KEFSKKFSWEKCVMGVRKVYE-E 348
Query: 364 LGD 366
L D
Sbjct: 349 LSD 351
>gi|11498225 LPS biosynthesis protein, putative [Archaeoglobus fulgidus]
>gi|7483856|pir||A69327 probable hexosyltransferase (EC
2.4.1.-) AF0617 - Archaeoglobus fulgidus
>gi|2650003|gb|AAB90623.1| (AE001062) LPS biosynthesis
protein, putative [Archaeoglobus fulgidus]
Length = 358
Score = 122 bits (303), Expect = 7e-27
Identities = 116/382 (30%), Positives = 175/382 (45%), Gaps = 45/382 (11%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYG-IDLIK 62
+KIA V ++P IGGV HV+ +A + K LT G+L K ID +
Sbjct: 1 MKIAQVCPRFYPHIGGVETHVYEIASRIAK-----KFDVEVLTTDPGGKLPKVEEIDGLT 55
Query: 63 VPGLIKDGINLSMIAKSSNSLVEYLK----GFDVVHAQ--HAFTPLSLKSIPAGNKVGAL 116
V + S S L +YLK +DVVHA HAF L NK+
Sbjct: 56 VRRF--KSLAPSEAYYFSPELYDYLKKNSSDYDVVHAHNYHAFPALFAALTKGKNKL--- 110
Query: 117 TLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVE-- 174
+ T H + N K + + + + VS + + K N + E
Sbjct: 111 -IFTPHYHGSGHSFFRNVLHKPYKIFGRKIFKRADAIVCVSNYEKNLVLK--NFKVAEDR 167
Query: 175 ---IPNGVNIERFNG-----RGREWGTRNILYVGRLEPRKGVNYLISAMKFVEGKLT--I 224
IPNG+N++ F R +E + ILYVGR+E KG++Y++ ++K + T +
Sbjct: 168 TYVIPNGINLDEFKDIEKIKRNKESWKKTILYVGRVEKYKGLDYVVKSLKHLPDNFTLEV 227
Query: 225 VGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEA 284
VG GS + + AKKL V D++ F +S++ELI Y K++V VL S EA+GIV+ EA
Sbjct: 228 VGKGSYKSKIVEMAKKLDVIDRIRFYQDLSRKELIDRYAKADVLVLLSKHEAYGIVVAEA 287
Query: 285 MASEVPVIGTSVGGIPEIIGDAGI--IVPPRDSKALANAINAILSNQKTAKRLGKLGRKR 342
+A++ P I + + E I + + I P + LA I + SN K
Sbjct: 288 LAAKTPCIVANTSALSEWIDNKNVFGIDYPINVSELARLIERV-SNVKAGDM-------- 338
Query: 343 VERLYSWDVVAERTERLYRGEL 364
+L WD V ER R+Y ++
Sbjct: 339 --KLLDWDDVNERLIRIYSAKI 358
>pir||T40367 n-acetylglucosaminyl-phosphatidylinositol - fission yeast
(Schizosaccharomyces pombe) >gi|2117303|emb|CAB09127.1|
(Z95620) n-acetylglucosaminyl-phosphatidylinositol
[Schizosaccharomyces pombe]
Length = 456
Score = 121 bits (301), Expect = 1e-26
Identities = 102/374 (27%), Positives = 182/374 (48%), Gaps = 33/374 (8%)
Query: 8 LVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNA---------LTNGKEGELQKYGI 58
+VSD++FP+ GG+ H+ L+ L +GH+V ++T+A LTNG L Y +
Sbjct: 1 MVSDFFFPQPGGIESHIFQLSQRLIDLGHKVIVITHAYKDRVGVRYLTNG----LTVYYV 56
Query: 59 DLIKVPGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTL 118
L V S N ++ + ++VH + + L +I +G T
Sbjct: 57 PLHTVYRETTFPSFFSFFPIFRNIVIR--ENIEIVHGHGSLSFLCHDAILHARTMGLKTC 114
Query: 119 VTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKA--SVSFLRKFTNAPIVE-I 175
T+HS+ F + S ++ K + V I VS + LR N V I
Sbjct: 115 FTDHSL----FGFADAGSIVTNKLLKFTMSDVNHVICVSHTCRENTVLRAVLNPKRVSVI 170
Query: 176 PNGVNIERF----NGRGREWGTRNILYVGRLEPRKGVNYLISAMKFV-----EGKLTIVG 226
PN + E F + +++ T I+ + RL KG++ LI+ + + + + I G
Sbjct: 171 PNALVAENFQPDPSKASKDFLT--IVVISRLYYNKGIDLLIAVIPRICAQHPKVRFVIAG 228
Query: 227 DGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMA 286
DG L+ +K ++D+VE LG + +++ + + +++ PSL+EAFG VL+EA +
Sbjct: 229 DGPKSIDLEQMREKYMLQDRVEMLGSVRHDQVRDVMVRGHIYLHPSLTEAFGTVLVEAAS 288
Query: 287 SEVPVIGTSVGGIPEIIGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERL 346
+ VI T VGG+PE++ + LA+ +++++++ K + + V+++
Sbjct: 289 CGLYVISTKVGGVPEVLPSHMTRFARPEEDDLADTLSSVITDYLDHKIKTETFHEEVKQM 348
Query: 347 YSWDVVAERTERLY 360
YSW VAERTE++Y
Sbjct: 349 YSWIDVAERTEKVY 362
>pir||C72340 probable hexosyltransferase (EC 2.4.1.-) TM0744 - Thermotoga
maritima (strain MSB8)
>gi|4981269|gb|AAD35825.1|AE001744_15 (AE001744)
conserved hypothetical protein [Thermotoga maritima]
Length = 406
Score = 120 bits (299), Expect = 2e-26
Identities = 95/378 (25%), Positives = 186/378 (49%), Gaps = 32/378 (8%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKV 63
+ IA+ SD Y P+I GVA + L + GH+V +V + E E + + I
Sbjct: 1 MNIAMFSDTYAPQINGVATSIRVYKKKLTERGHKVVVVA---PSAPEEEKDVFVVRSIPF 57
Query: 64 PGLIKDGINLSMIAKSSNSLVEYLK--GFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTN 121
P + I+++ S+ +++E+++ ++H+ F + K++ ++G + T
Sbjct: 58 PFEPQHRISIA----STKNILEFMRENNVQIIHSHSPFF-IGFKALRVQEEMGLPHVHTY 112
Query: 122 HSV--EFENFSILNGFS---KMSYSYFKMYLGQVKVGIGVSKASVSFLRKF-TNAPIVEI 175
H++ E+ ++ I F+ ++ + + V I ++ L + PI +
Sbjct: 113 HTLLPEYRHY-IPKPFTPPKRLVEHFSAWFCNMTNVVIAPTEDIKRELESYGVKRPIEVL 171
Query: 176 PNGVNIERFNGRG-----REW---GTRNILYVGRLEPRKGVNYLISAMKFVEGK---LTI 224
P G+ +E+F R+W G + +LY GR+ K +++L+ + + +
Sbjct: 172 PTGIEVEKFEVEAPEELKRKWNPEGKKVVLYAGRIAKEKNLDFLLRVFESLNAPGIAFIM 231
Query: 225 VGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEA 284
VGDG R+ ++ AK+ G++ K+ GF+ +E+ L YK +VFV S +E G+VLLEA
Sbjct: 232 VGDGPEREEVEEFAKEKGLDLKIT--GFVPHDEIPLYYKLGDVFVFASKTETQGLVLLEA 289
Query: 285 MASEVPVIGTSVGGIPEIIG--DAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKR 342
+AS +PV+ G+ +++ +A +++ + + A I IL N + + L GR+
Sbjct: 290 LASGLPVVALKWKGVKDVLKNCEAAVLIEEENERLFAEKIKHILKNDRLREELSTKGREF 349
Query: 343 VERLYSWDVVAERTERLY 360
V + +S D +R E +Y
Sbjct: 350 VRKEWSVDRFVQRLEEIY 367
>pir||C70859 probable hexosyltransferase (EC 2.4.1.-) Rv3032 [similarity] -
Mycobacterium tuberculosis (strain H37RV)
>gi|2791630|emb|CAA16117.1| (AL021287) hypothetical
protein Rv3032 [Mycobacterium tuberculosis]
Length = 414
Score = 120 bits (298), Expect = 3e-26
Identities = 111/407 (27%), Positives = 184/407 (44%), Gaps = 57/407 (14%)
Query: 4 LKIALVSDWYFPK--IGGVAIHVHNLAIHLRKMGHEVSIV------TNALTNGKEGELQK 55
++I +VS W +P IGG+ HVH+L+ L GH+V ++ T+ T+ E+ +
Sbjct: 1 MRILMVS-WEYPPVVIGGLGRHVHHLSTALAAAGHDVVVLSRCPSGTDPSTHPSSDEVTE 59
Query: 56 ---------------YGIDLIKVP-----GLIKDGINLSMIAKSSNSLVEYLKGFDVVHA 95
+G D++ +I+ G+ L + + + + D + A
Sbjct: 60 GVRVIAAAQDPHEFTFGNDMMAWTLAMGHAMIRAGLRLKKLGTDRSWRPDVVHAHDWLVA 119
Query: 96 QHAFTPLSLKSIPAGNKVGALTLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIG 155
A +P + + A T HS ++G + +L V+
Sbjct: 120 HPAIALAQFYDVPMVSTIHA-TEAGRHS------GWVSGALSRQVHAVESWL--VRESDS 170
Query: 156 VSKASVSFLRKFTN------APIVEIPNGVNIER--FNGRGREWGTRNILYVGRLEPRKG 207
+ S S + T A I I NG++ R F R G +LYVGRLE KG
Sbjct: 171 LITCSASMNDEITELFGPGLAEITVIRNGIDAARWPFAARRPRTGPAELLYVGRLEYEKG 230
Query: 208 VNYLISAMKFVEGK-----LTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLY 262
V+ I+A+ + LTI G+G+ + L QA+K V F+G + EL+ L
Sbjct: 231 VHDAIAALPRLRRTHPGTTLTIAGEGTQQDWLIDQARKHRVLRATRFVGHLDHTELLALL 290
Query: 263 KKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALAN 320
+++ VLPS E FG+V LEA A+ P++ +++GG+ E + G G+ PRD LA
Sbjct: 291 HRADAAVLPSHYEPFGLVALEAAAAGTPLVTSNIGGLGEAVINGQTGVSCAPRDVAGLAA 350
Query: 321 AINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY----RGE 363
A+ ++L + A+R + R+R+ + W VA T ++Y RGE
Sbjct: 351 AVRSVLDDPAAAQRRARAARQRLTSDFDWQTVATATAQVYLAAKRGE 397
>pir||T20374 hypothetical protein D2085.6 - Caenorhabditis elegans
>gi|3875385|emb|CAA91062.1| (Z54284) contains similarity
to Pfam domain: PF00534 (Glycosyl transferases group 1),
Score=91.6, E-value=9.5e-25, N=1~cDNA EST yk349e7.5
comes from this gene [Caenorhabditis elegans]
Length = 444
Score = 120 bits (298), Expect = 3e-26
Identities = 95/369 (25%), Positives = 176/369 (46%), Gaps = 14/369 (3%)
Query: 6 IALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPG 65
IALVSD++ P GGV H++ LA L ++GH V ++T+ N K G+ + +P
Sbjct: 10 IALVSDFFCPNAGGVETHIYFLAQCLIELGHRVVVITHGYGNRKGIRYLSNGLKVYYLPF 69
Query: 66 LIK-DGINLSMIAKSSNSLVEYL--KGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNH 122
++ +G L I S L + L + ++H F+ L+ +++ G +G T+ T+H
Sbjct: 70 IVAYNGATLGSIVGSMPWLRKVLLRENVQIIHGHSTFSSLAHETLMIGGLMGLRTVFTDH 129
Query: 123 SV-EFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGVNI 181
S+ F + S + +K+ Y + + Q SK + K + IPN +
Sbjct: 130 SLFGFADASAILT-NKLVLQYSLINVDQTICVSYTSKENTVLRGKLDPNKVSTIPNAIET 188
Query: 182 ERFNGRGREW--GTRNILYVGRLEPRKGVNYLISAMKFV-----EGKLTIVGDGSMRKVL 234
F ++ I+++GRL RKG + L + V + I GDG R L
Sbjct: 189 SLFTPDRNQFFNNPTTIVFLGRLVYRKGADLLCEIVPKVCARHKSVRFIIGGDGPKRIEL 248
Query: 235 KMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGT 294
+ ++ + ++V LG + ++ + + ++F+ SL+EAF + ++EA + + V+ T
Sbjct: 249 EEMLERFKLHERVVILGMLPHNQVKRVLNQGQIFINTSLTEAFCMSIVEAASCGLHVVST 308
Query: 295 SVGGIPEI--IGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVV 352
VGG+PE+ IG+ + P + + A+ +K + V ++Y+W V
Sbjct: 309 RVGGVPEVLPIGEFISLEEPVPDDLVDALLKAVDRREKGLLMDPTEKHEAVSKMYNWPDV 368
Query: 353 AERTERLYR 361
A RT+ +Y+
Sbjct: 369 AARTQVIYQ 377
>pir||G75007 lps biosynthesis rfbu related protein PAB1301 - Pyrococcus abyssi
(strain Orsay) >gi|5459015|emb|CAB50501.1| (AJ248288)
LPS BIOSYNTHESIS RFBU RELATED PROTEIN [Pyrococcus
abyssi]
Length = 330
Score = 120 bits (297), Expect = 3e-26
Identities = 106/352 (30%), Positives = 166/352 (47%), Gaps = 38/352 (10%)
Query: 13 YFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPGLIKDGIN 72
Y P GGVA H+ + LR+ H V ++T Y + + V GL GI+
Sbjct: 9 YPPHRGGVARHLKEVVERLRRR-HSVDVLTYGTV-----ATDVYSVKVPNVFGL--RGIS 60
Query: 73 LSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFENFSIL 132
S +A + + +D++HA + T S + A K+G +VT H + E S L
Sbjct: 61 FSFLASKKIVELHEERNYDLIHAHYVGTT-SFAGVLAKRKLGIPLVVTAHGSDLEFMSKL 119
Query: 133 NGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGVNIERFNGRGREWG 192
+ + K L + VS + I NGV+ G
Sbjct: 120 ----PLGRYFVKASLREADAVTAVSHFLAKRAISLGAKSVEVISNGVST-----CGDRVS 170
Query: 193 TRNILYVGRLEPRKGVN-YLISAMKFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLG 251
+ I+++G++ KG++ +L A +F E + I G+G++R++ V+FLG
Sbjct: 171 KKYIVFLGKVSKYKGIDEFLELARRFPELEFLIAGEGNLREL----------PSNVKFLG 220
Query: 252 FISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDA--GII 309
+++ ++++ ++ VLPS E FG+V+LEA + VP +G VGGIPE+I D G +
Sbjct: 221 YVNPDDVL---SRALALVLPSKREGFGMVILEANSFSVPALGRKVGGIPELIRDGKNGFL 277
Query: 310 VPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYR 361
DS A +L + K ++G LG KRV LYSWD VA R ERLYR
Sbjct: 278 F---DSIDEAEKFLRVLLDLKVNAKVGALG-KRVASLYSWDDVAIRYERLYR 325
>sp|P37287|PIGA_HUMAN N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN
(GLCNAC-PI SYNTHESIS PROTEIN) (PHOSPHATIDYLINOSITOL
GLYCAN COMPLEMENTATION CLASS A) (PIG-A)
>gi|423036|pir||A46217 GPI-anchor biosynthesis protein
PIG-A - human >gi|219994|dbj|BAA02019.1| (D11466) PIG-A
protein [Homo sapiens] >gi|1132481|dbj|BAA05966.1|
(D28791) PIG-A protein [Homo sapiens]
Length = 484
Score = 119 bits (296), Expect = 4e-26
Identities = 99/368 (26%), Positives = 179/368 (47%), Gaps = 17/368 (4%)
Query: 6 IALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPG 65
I +VSD+++P +GGV H++ L+ L + GH+V IVT+A N K G+ + +P
Sbjct: 35 ICMVSDFFYPNMGGVESHIYQLSQCLIERGHKVIIVTHAYGNRKGIRYLTSGLKVYYLPL 94
Query: 66 LIKDGINLSMIAKSSNSLVEYL---KGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNH 122
+ + + S L+ Y+ + ++H+ +F+ ++ ++ +G T+ T+H
Sbjct: 95 KVMYNQSTATTLFHSLPLLRYIFVRERVTIIHSHSSFSAMAHDALFHAKTMGLQTVFTDH 154
Query: 123 SVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASV--SFLRKFTNAPIVE-IPNGV 179
S+ F + S ++ + L I VS S + LR N IV IPN V
Sbjct: 155 SL----FGFADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAV 210
Query: 180 NIERFNGRG-REWGTRNILYVGRLEPRKGVNYLISAM-----KFVEGKLTIVGDGSMRKV 233
+ F R + I+ V RL RKG++ L + K+ + I G+G R +
Sbjct: 211 DPTDFTPDPFRRHDSITIVVVSRLVYRKGIDLLSGIIPELCQKYPDLNFIIGGEGPKRII 270
Query: 234 LKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIG 293
L+ ++ + D+V LG + +++ + + +F+ SL+EAF + ++EA + + V+
Sbjct: 271 LEEVRERYQLHDRVRLLGALEHKDVRNVLVQGHIFLNTSLTEAFCMAIVEAASCGLQVVS 330
Query: 294 TSVGGIPEIIGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLG-RKRVERLYSWDVV 352
T VGGIPE++ + II+ K+L + + K+ V+ Y+W V
Sbjct: 331 TRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPAPENIHNIVKTFYTWRNV 390
Query: 353 AERTERLY 360
AERTE++Y
Sbjct: 391 AERTEKVY 398
>pir||A55731 GPI-anchor biosynthesis protein PIG-A - mouse
>gi|7441626|pir||I52484 gene PIG-A protein - mouse
>gi|577723|dbj|BAA05047.1| (D26047) Pig-a precursor [Mus
musculus] >gi|1402592|dbj|BAA06663.1| (D31863) PIG-A
protein [Mus musculus]
Length = 485
Score = 119 bits (295), Expect = 6e-26
Identities = 98/369 (26%), Positives = 179/369 (47%), Gaps = 18/369 (4%)
Query: 6 IALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPG 65
I +VSD+++P +GGV H++ L+ L + GH+V VT+A N K G+ + +P
Sbjct: 35 ICMVSDFFYPNMGGVESHIYQLSQCLIERGHKVITVTHAYGNRKGVRYLTNGLKVYYLPL 94
Query: 66 LIKDGINLSMIAKSSNSLVEYL---KGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNH 122
+ + + S L+ Y+ + ++H+ +F+ ++ ++ +G T+ T+H
Sbjct: 95 RVMYNQSTATTLFHSLPLLRYIFVRERITIIHSHSSFSAMAHDALFHAKTMGLQTVFTDH 154
Query: 123 SVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASV--SFLRKFTNAPIVE-IPNGV 179
S+ F + S ++ + L I VS S + LR N IV IPN V
Sbjct: 155 SL----FGFADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAV 210
Query: 180 NIERFNGRG--REWGTRNILYVGRLEPRKGVNYLISAM-----KFVEGKLTIVGDGSMRK 232
+ F R ++ V RL RKG + L + K+ E I G+G R
Sbjct: 211 DPTDFTPDPFRRHDSVITVVVVSRLVYRKGTDLLSGIIPELCQKYQELHFLIGGEGPKRI 270
Query: 233 VLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVI 292
+L+ ++ + D+V+ LG + +++ + + +F+ SL+EAF + ++EA + + V+
Sbjct: 271 ILEEVRERYQLHDRVQLLGALEHKDVRNVLVQGHIFLNTSLTEAFCMAIVEAASCGLQVV 330
Query: 293 GTSVGGIPEIIGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLG-RKRVERLYSWDV 351
T VGGIPE++ ++ II+ K+L + + + K+ V+ Y+W
Sbjct: 331 STKVGGIPEVLPESLIILCEPSVKSLCDGLEKAIFQVKSGTLPAPENIHNVVKTFYTWRN 390
Query: 352 VAERTERLY 360
VAERTE++Y
Sbjct: 391 VAERTEKVY 399
>pir||S77553 probable hexosyltransferase (EC 2.4.1.-) sll1971 [similarity] -
Synechocystis sp. (strain PCC 6803)
>gi|1652478|dbj|BAA17400.1| (D90905) hypothetical
protein [Synechocystis sp.]
Length = 404
Score = 118 bits (292), Expect = 1e-25
Identities = 110/405 (27%), Positives = 178/405 (43%), Gaps = 59/405 (14%)
Query: 8 LVSDWYFPK--IGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPG 65
LV W FP +GG+A HV L L + G+E+ ++T A E+ GI + +VP
Sbjct: 13 LVLAWEFPPRIVGGIARHVAELYPELVQQGYEIHLITVATEESPSQEMVD-GIHIYRVPV 71
Query: 66 LIK-------DGINLSMIAKSSNSLVEYLKGFDVVHAQ-------------HAFTPL--S 103
D +N +M + +L + K FDV+HA H PL +
Sbjct: 72 PPSNDFFQWVDNMNRAM-EQRGQALFQEQKKFDVIHAHDWLVGDVAINLKHHGKIPLVVT 130
Query: 104 LKSIPAGNKVGALTLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSF 163
+ + G G + E I NG+ + S + + + G K V +
Sbjct: 131 IHATEYGRYNGLYNDTQRYIAGKEGILIYNGWRVIVCSNYMRHELERAFGTPWDKIDVIY 190
Query: 164 LRKFTNAPIVEIPNGVNIER-----------FNGRGREWGTRNILYVGRLEPRKGVNYLI 212
NG+ E+ F + E G + + YVGR+ KG++ L+
Sbjct: 191 -------------NGIRPEKKHRRPDFDYRNFRRKFAEDGEKIVYYVGRMTYEKGISVLL 237
Query: 213 SAMKFV------EGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSE 266
+A V + K I+G G+ + LK A LG+ + F GF+S E+L ++
Sbjct: 238 TAAPQVLEALNDQVKFVIIGGGNTDR-LKQLAWNLGIWEHCFFTGFMSDEDLDKFQTIAD 296
Query: 267 VFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINA 324
V PSL E FGIV LE+ A+ VPV+ ++ GG+ E++ GI+ + +LA+ I
Sbjct: 297 CAVFPSLYEPFGIVALESFAARVPVVVSNTGGLAEVVRHHSTGIVTQTNNPDSLAHGILE 356
Query: 325 ILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGELGDSDT 369
ILSN AK+L + K + ++W +A+ T +Y + + T
Sbjct: 357 ILSNPSLAKQLVEAAYKDLGIRFNWSKLAKETAAIYERVVEERQT 401
>emb|CAB70927.1| (AL137778) putative sugar transferase [Streptomyces coelicolor
A3(2)]
Length = 387
Score = 115 bits (285), Expect = 9e-25
Identities = 97/367 (26%), Positives = 172/367 (46%), Gaps = 34/367 (9%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKV 63
++I +V + + GGV H+ +LA + ++GHEVS++ A + L Y + +
Sbjct: 1 MRIGIVCPYSWDVPGGVQFHIRDLAEYFVRLGHEVSVLAPA---DDDTPLPPYVVSAGRA 57
Query: 64 PGLIKDG----INLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLV 119
+ +G +N ++ + + GFDV+H P +G LT
Sbjct: 58 VPVPYNGSVARLNFGFLSAARVRRWLHEGGFDVIHIHE----------PTSPSLGLLTCW 107
Query: 120 TNHSVEFENFSILNGFSK---MSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIP 176
F N S+ +Y+ + L ++ I VS+ + L + V IP
Sbjct: 108 AAQGPIVATFHTSNPRSRAMIAAYAILQAALEKISARIAVSEYARRTLVEHLGGDAVVIP 167
Query: 177 NGVNIERFNGR--GREWGTRNILYVGRL-EPRKGVNYLISAMKFV-----EGKLTIVGDG 228
NGV+++ F EW I ++GR+ EPRKG+ L+ A+ + + +L + G G
Sbjct: 168 NGVDVDFFADAEPKPEWQGDTIGFIGRIDEPRKGLPVLMRALPAILAARPQTRLLVAGRG 227
Query: 229 SMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSL-SEAFGIVLLEAMAS 287
+ ++ K+L +VEFLG IS E+ + +++V P+ E+FGIVL+EAM++
Sbjct: 228 DEEEAVESLPKEL--RSRVEFLGMISDEDKARFLRSVDLYVAPNTGGESFGIVLVEAMSA 285
Query: 288 EVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVER 345
PV+ + + +++ G AG + P D+ ALA A +L++ + L + G V R
Sbjct: 286 GAPVLASDLDAFAQVLDQGAAGELFPNEDADALAEAAVRLLADPERRAALRERGSAHVRR 345
Query: 346 LYSWDVV 352
+ W V
Sbjct: 346 -FDWSTV 351
>pir||E72354 probable hexosyltransferase (EC 2.4.1.-) TM0622 - Thermotoga
maritima (strain MSB8)
>gi|4981142|gb|AAD35706.1|AE001736_4 (AE001736)
lipopolysaccharide biosynthesis protein, putative
[Thermotoga maritima]
Length = 388
Score = 115 bits (284), Expect = 1e-24
Identities = 91/283 (32%), Positives = 154/283 (54%), Gaps = 23/283 (8%)
Query: 91 DVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSV-EFENFSILNGFSKMSYSYFKMYLGQ 149
D++H+ + L + IPA + + T H+V E + I F+++++ +F G
Sbjct: 96 DIIHSH--LSALRIALIPALLCRIPVKVHTIHTVAEKDAKGITRFFNRIAFKFF----GF 149
Query: 150 VKVGIG--VSKASVSFLRKFTNAPIVEIPNGVNIERFNGRGREWGTRN---ILYVGRLEP 204
V V I V+++ + + P++ NG+++++F+ + R+ ++ V RL
Sbjct: 150 VPVSISQEVAESVKKLYGRKISTPVIY--NGIDVQKFSIDQPKRVDRDKTILINVARLSR 207
Query: 205 RKGVNYLISAM-KFVEG----KLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELI 259
K L+ A K V+ +L +VGDG +R+ ++ K+LG+E+KV+F G S +
Sbjct: 208 EKNHALLVRAFSKAVQSCPNLELWLVGDGELRRDIEELVKQLGLEEKVKFFGVRSDVPEL 267
Query: 260 LLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKA 317
L ++++FVL S E FG+V+ EAMA+ +PVI T++GGIPEI+ G AGI+VPP+D A
Sbjct: 268 L--SQADIFVLSSDYEGFGLVVAEAMAAGLPVIATAIGGIPEILEGGRAGILVPPKDVDA 325
Query: 318 LANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY 360
LA AI + ++K L GRK V + E+LY
Sbjct: 326 LAKAIVELARDEKKRAELSDYGRKLVAERFDIRRTVREYEKLY 368
>gb|AAF57802.1| (AE003802) CG6401 gene product [Drosophila melanogaster]
Length = 479
Score = 113 bits (280), Expect = 3e-24
Identities = 90/337 (26%), Positives = 172/337 (50%), Gaps = 27/337 (8%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQ--KYGIDLI 61
++I +VSD+++P IGGV HV+NL+ L +GH++ ++T+A G+ +Y +
Sbjct: 1 MRICMVSDFFYPSIGGVEEHVYNLSQMLLSLGHKIVVLTHAY-----GDCSGIRYVTGYL 55
Query: 62 KVPGL-IKDGINLSMIAKSSNSL-----VEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGA 115
KV L IK N ++ + ++ V + +VVH AF+ L+ +++ G+ +G
Sbjct: 56 KVYYLPIKVCYNQCILPTAVCNVPMLRAVLLRERVEVVHGHSAFSALAHEALMVGSLLGL 115
Query: 116 LTLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVS---KASVSFLRKFTNAPI 172
T+ T+HS+ F + + ++ + ++ LG V I VS K + + +
Sbjct: 116 KTVFTDHSL----FGFADLSAALTNNLLEVNLGMVNHAICVSHIGKENTVLRARVAKHRV 171
Query: 173 VEIPNGVNIERFNGRGREWGTR---NILYVGRLEPRKGVNYLISAMKFVEG----KLTIV 225
IPN V+ F ++ + NI+ RL RKG++ L + + IV
Sbjct: 172 SVIPNAVDTALFTPDPQQRPSNDIINIVVASRLVYRKGIDLLAGIIPRFKNTPNINFIIV 231
Query: 226 GDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAM 285
GDG R +L+ +K ++++V+ +G + + + +F+ SL+EA+ + ++EA
Sbjct: 232 GDGPKRDLLEEIREKTNMQERVQMVGAVEHNRVRDFLVRGHIFLNTSLTEAYCMAIVEAA 291
Query: 286 ASEVPVIGTSVGGIPEIIGDAGIIVPPRDSKALANAI 322
+ + V+ TSVGGIPE++ + I++ + A+ AI
Sbjct: 292 SCGLQVVSTSVGGIPEVLPKSLILLAEPEIDAIYAAI 328
>gb|AAF76891.1| (AF267484) PIG-A [Paramecium tetraurelia]
Length = 442
Score = 112 bits (277), Expect = 8e-24
Identities = 91/373 (24%), Positives = 178/373 (47%), Gaps = 24/373 (6%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKV 63
+ I L+ D+++P +GGV +H+ L + L + G +V I+T+ G+ +
Sbjct: 2 VNICLICDFFYPCLGGVEMHIFQLGLCLIERGLKVIIITHKYQGRSGVRYMTNGLKVYYC 61
Query: 64 PGLIKDGINLSMIAKSSNSL-----VEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTL 118
P + I ++ +L + + +VH+ A + L + + +G T+
Sbjct: 62 PFI--PAIQTVVLFTYVGTLPIFRQILLREEIHIVHSHAATSYLGGELLLHAKSMGFKTV 119
Query: 119 VTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVS---KASVSFLRKFTNAPIVEI 175
T+HS+ F+ + S K L ++ I VS K ++S I I
Sbjct: 120 FTDHSL----FAFNDAASFHVNKILKYILCEIDHSISVSHVSKENLSMRASLDPRNISVI 175
Query: 176 PNGVNIERFNGRGRE---WGTRNILYVGRLEPRKGVNYLISAMKFV-----EGKLTIVGD 227
PN V+ RF ++ T NI+ + R+ RKGV+ L+ ++ + E I GD
Sbjct: 176 PNAVDCSRFTPNPQKRYPLNTINIVVICRMTFRKGVDLLVDVLQIICKQHPEIYFIIGGD 235
Query: 228 GSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMAS 287
G +K+L+ ++ ++++ E LG + ++ + + +F+ SL+EAF I ++EA +
Sbjct: 236 GPKKKILEETIQRYNLQNQTELLGSVPGHQVKDVLNRGHIFLNTSLTEAFCIAIVEAASC 295
Query: 288 EVPVIGTSVGGIPEIIGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLY 347
+ V+ T+VGGI E++ ++ + +++ I + K + + V+++Y
Sbjct: 296 GLCVVSTNVGGISEVLPQNMVLYADPTPEDISHKITQAIPIAKNFYVYQQ--HELVKKMY 353
Query: 348 SWDVVAERTERLY 360
SW+ VAERTE++Y
Sbjct: 354 SWEQVAERTEKVY 366
>emb|CAB09632.1| (Z96801) hypothetical protein MLCL581.14c [Mycobacterium leprae]
Length = 374
Score = 111 bits (275), Expect = 1e-23
Identities = 103/374 (27%), Positives = 181/374 (47%), Gaps = 31/374 (8%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKV 63
++I ++ + F GGV HV LA +R G +V ++ A + E I +
Sbjct: 1 MRIGMICPYSFDVPGGVQSHVLQLAEVMRARGQQVRVLAPASPDVSLPEYVVSAGRAIPI 60
Query: 64 P---GLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTP-LSLKSIPAGNKVGALTLV 119
P + + + ++ ++ LV+ FDV+H P LS+ ++ +V +V
Sbjct: 61 PYNGSVARLQFSPAVHSRVRRWLVD--GDFDVLHLHEPNAPSLSMWAL----RVAEGPIV 114
Query: 120 TNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGV 179
L+ F + + + +G+ I VS + + + + VEIPNGV
Sbjct: 115 ATFHTSTTKSLTLSVFQGVLRPWHEKIIGR----IAVSDLARRWQMEALGSDAVEIPNGV 170
Query: 180 NIERFNGRGREWGT----RNILYVGRL-EPRKGVNYLISAMK-----FVEGKLTIVGDGS 229
N++ + + G + +L++GR EPRKG++ L+ A+ F + +L IVG G
Sbjct: 171 NVDSLSSAPQLAGYPRLGKTVLFLGRYDEPRKGMSVLLDALPGVMECFDDVQLLIVGRGD 230
Query: 230 MRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLS-EAFGIVLLEAMASE 288
+ L+ QA G+ + + FLG + + ++V+ P++ E+FGIVL+EAMA+
Sbjct: 231 EEQ-LRSQAG--GLVEHIRFLGQVDDAGKAAAMRSADVYCAPNIGGESFGIVLVEAMAAG 287
Query: 289 VPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERL 346
PV+ + + ++ G+ G +VP DS ALA+A+ A+L N +R G + V R
Sbjct: 288 TPVVASDLDAFRRVLRDGEVGHLVPAGDSAALADALVALLRNDVLRERYVAAGAEAVRR- 346
Query: 347 YSWDVVAERTERLY 360
Y W VVA + R+Y
Sbjct: 347 YDWSVVASQIMRVY 360
>dbj|BAB05134.1| (AP001512) unknown conserved protein in others [Bacillus
halodurans]
Length = 923
Score = 111 bits (274), Expect = 2e-23
Identities = 105/377 (27%), Positives = 174/377 (45%), Gaps = 29/377 (7%)
Query: 8 LVSDWYFPK--IGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYG-IDLIKVP 64
L+ W +P +GG++ HV L+ L K GHE+ +VT A+ E E K G + + +V
Sbjct: 540 LMLSWEYPPHVVGGLSRHVDALSQALAKKGHEIHVVTAAMDGAPEYE--KNGEVHIHRVS 597
Query: 65 GLIKDGIN-LSMIAKSSNSLVEYLKG------FDVVHAQHAFTPLSLKSIPAGNKVGALT 117
GL + L +A + ++ E++K FDV+HA +S ++ +
Sbjct: 598 GLQPEREPFLDWVASLNLAMFEHVKKLYRFRPFDVIHAHDWL--VSGAALALKHLFQTSL 655
Query: 118 LVTNHSVEFENFSILNGFSKMSYSYFKMYL----GQVKVGIGVSKASVSFLRKFTNAPIV 173
+ T H+ E ++ + + +M L Q+ V K V L +
Sbjct: 656 MATIHATEHGRNQGIHTELQQAIHEQEMKLVTEADQIIVCSQFMKEHVQSLFVPNPDKVA 715
Query: 174 EIPNGVNIERFNG-RGREWGTRN---ILYVGRLEPRKGVNYLISAMKFVEG-----KLTI 224
I NGV E+ R + N + VGR+ KG + LI A + + +
Sbjct: 716 VIANGVAREQIEAARLQTISPENRFIVFSVGRIVQEKGFSLLIEAAAKCKELGEPIQFVV 775
Query: 225 VGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEA 284
G G + + Q K+ +E + F+G+IS E Y +++V + PSL E FGIV LEA
Sbjct: 776 AGHGPLLADYQQQVKERHLEAWISFVGYISDSERNEWYHRADVCIFPSLYEPFGIVALEA 835
Query: 285 MASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKR 342
MA+ P I + GG+ EI+ GD G+ VP D A+ + ++ ++G G +
Sbjct: 836 MAAGTPTIVSDTGGLAEIVEHGDNGLKVPTGDVDAIVAQLLSLYHKPLLRAQIGFKGSQD 895
Query: 343 VERLYSWDVVAERTERL 359
V YSW+ +A++TE +
Sbjct: 896 VIEQYSWETIADQTEAI 912
>gb|AAF14309.1| (U45308) SqdX [Synechococcus PCC7942]
Length = 377
Score = 108 bits (268), Expect = 9e-23
Identities = 97/382 (25%), Positives = 168/382 (43%), Gaps = 31/382 (8%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKV 63
++IAL ++ + PK+ G+ + + HL+++GH V + + + YG+ +
Sbjct: 1 MRIALFTETFLPKVDGIVTRLRHTVDHLQRLGHTVMVFCPDGGLREHKGARVYGVKGFPL 60
Query: 64 PGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHS 123
P + + L+ +E + D++H + L L I + + + H+
Sbjct: 61 P--LYPELKLAFPLPKVGKALERFRP-DLIHVVNPAV-LGLGGIYYAKALNVPLVASYHT 116
Query: 124 -----VEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNG 178
+E +L G + + K+ Q + + S A V L G
Sbjct: 117 HLPKYLEHYGLGVLEG---VLWELLKLAHNQAAINLCTSTAMVQELTDHGIEHCCLWQRG 173
Query: 179 VNIERFNG-------RGREWGTRN----ILYVGRLEPRKGVNYLISAMKF-VEGKLTIVG 226
V+ E F R R G + +LYVGRL K ++ L + E L +VG
Sbjct: 174 VDTETFRPDLATAAMRDRLSGGKPTAPLLLYVGRLSAEKQIDRLRPILDANPEACLALVG 233
Query: 227 DGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMA 286
DG R L+ +L + +F+G++ E+L Y ++ FV PS +E G+VLLEAMA
Sbjct: 234 DGPHRAELE----QLFAGTQTQFIGYLHGEQLGAAYASADAFVFPSRTETLGLVLLEAMA 289
Query: 287 SEVPVIGTSVGGIPEIIGDA--GIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVE 344
+ PV+ + GGIP+I+ D G + P D + AI +L+N + L + R+ E
Sbjct: 290 AGCPVVAANSGGIPDIVSDGINGFLFDPEDEQGAIAAIQRLLANPAEREILRQAARQEAE 349
Query: 345 RLYSWDVVAERTERLYRGELGD 366
R +SW+ + + Y L D
Sbjct: 350 R-WSWNAATRQLQDYYCEVLAD 370
>pir||T47450 n-acetylglucosaminyl-phosphatidylinositol-like protein -
Arabidopsis thaliana >gi|6911848|emb|CAB72148.1|
(AL138649)
n-acetylglucosaminyl-phosphatidylinositol-like protein
[Arabidopsis thaliana]
Length = 450
Score = 108 bits (267), Expect = 1e-22
Identities = 98/377 (25%), Positives = 170/377 (44%), Gaps = 30/377 (7%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKV 63
L++ +VSD++FP GGV H++ L+ L K+GH+V ++T+A N G+ + V
Sbjct: 7 LRVLMVSDFFFPNFGGVENHIYYLSQCLLKLGHKVVVMTHAYGNRSGVRYMTGGLKVYYV 66
Query: 64 PGLIKDGINLSMIAKSSNSLVEYL---KGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVT 120
P + +V + + VVH AF+ L +++ +G + T
Sbjct: 67 PWRPFVMQTTFPTVYGTLPIVRTILRREKITVVHGHQAFSTLCHEALMHARTMGYKVVFT 126
Query: 121 NHSVEFENFSILNGFSKMSYSY----FKMYLGQVKVGIGVSKASV--SFLRK-FTNAPIV 173
+HS L GF+ + + + L + I VS S + LR + A +
Sbjct: 127 DHS--------LYGFADVGSIHMNKVLQFSLADIDQAICVSHTSKENTVLRSGLSPAKVF 178
Query: 174 EIPNGVNIERFNGRGREWGTR--NILYVGRLEPRKGVNYLISAMK-----FVEGKLTIVG 226
IPN V+ F T I+ + RL RKG + L+ + + + + G
Sbjct: 179 MIPNAVDTAMFKPASVRPSTDIITIVVISRLVYRKGADLLVEVIPEVCRLYPNVRFVVGG 238
Query: 227 DGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMA 286
DG L+ +K ++D+VE LG + + + +F+ SL+EAF I +LEA +
Sbjct: 239 DGPKHVRLEEMREKHSLQDRVEMLGAVPHSRVRSVLVTGHIFLNSSLTEAFCIAILEAAS 298
Query: 287 SEVPVIGTSVGGI---PEIIGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRV 343
+ + T VGG +++ D +++ D + AI +S T + R+
Sbjct: 299 CGLLTVSTRVGGFLHGLQVLPDDMVVLAEPDPDDMVRAIEKAISILPTIN--PEEMHNRM 356
Query: 344 ERLYSWDVVAERTERLY 360
++LYSW VA+RTE +Y
Sbjct: 357 KKLYSWQDVAKRTEIVY 373
>pir||T34839 probable hexosyltransferase (EC 2.4.1.-) SC2G5.06 [similarity] -
Streptomyces coelicolor >gi|4455730|emb|CAB36593.1|
(AL035478) putative transferase [Streptomyces coelicolor
A3(2)]
Length = 406
Score = 107 bits (265), Expect = 2e-22
Identities = 68/204 (33%), Positives = 112/204 (54%), Gaps = 17/204 (8%)
Query: 175 IPNGVNIERFN-----GRGREWGTRN-ILYVGRLEPRKGVNYLISAMKFVEGKLTIVGDG 228
+P GV+ E F+ GR E R+ +L GRL PRKG + + A+ + ++ G
Sbjct: 189 VPCGVDAEHFHPAADTGRTPERRLRHRLLACGRLVPRKGYDQAVRALAHIPDAELLIAGG 248
Query: 229 SMRKVLKMQ---------AKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGI 279
L+ + A++ GV D+V LG + +++ L + S++ + + E FGI
Sbjct: 249 PPAGALETEPEARRLTGIARRAGVADRVRLLGAVDPDDMPALLRSSDLVLCTPVYEPFGI 308
Query: 280 VLLEAMASEVPVIGTSVGGIPEIIGD--AGIIVPPRDSKALANAINAILSNQKTAKRLGK 337
V LEAMA VPV+ T VGG + + D G +V P+D A+A A +L++++ ++ G+
Sbjct: 309 VPLEAMACGVPVLATDVGGHRDSVADGVTGRLVAPQDPGAVAAAARELLADERLRRQYGR 368
Query: 338 LGRKRVERLYSWDVVAERTERLYR 361
GR+RV R Y+W VA+ E++YR
Sbjct: 369 NGRERVLRHYTWARVADGAEQVYR 392
>pir||C71154 hypothetical protein PH0434 - Pyrococcus horikoshii
>gi|3256837|dbj|BAA29520.1| (AP000002) 336aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 336
Score = 107 bits (264), Expect = 3e-22
Identities = 106/357 (29%), Positives = 161/357 (44%), Gaps = 33/357 (9%)
Query: 13 YFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPGLIK-DGI 71
Y P GGVA HV +L +L + HEV ++T GK GE Y +KVP + G
Sbjct: 9 YPPHRGGVARHVKDLVDYLSRE-HEVHVITYGTVKGK-GENVSY----VKVPNIFGLRGT 62
Query: 72 NLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFENFSI 131
+ +++A + FD++HA + T S + + G +VT H + + S
Sbjct: 63 SFTLLASKLGVKLHKKLNFDLIHAHYVGTT-SYAGVLIKERTGLPLVVTAHGSDLDFTSK 121
Query: 132 LNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGVNIERFNGRGREW 191
L + Y K L + I VS + + IPN V G+ R
Sbjct: 122 L----PLGSYYVKKSLIKANAVIAVSHYLGVKAKMLGAENVKVIPNWVTK---TGKSRG- 173
Query: 192 GTRNILYVGRLEPRKGVNYLISAMK-FVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFL 250
I ++GRL KGV I K F + K + G+G + K L ++ K V+FL
Sbjct: 174 --EYIAFIGRLTEYKGVEDFIELAKLFPQEKFVVAGEGPLLKKLMKESPK-----NVKFL 226
Query: 251 GFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDA--GI 308
G+ E+++ K++V +LPS E FG+V+LEA + +VP +G VGGI EII D G
Sbjct: 227 GYKPSEDVL---SKAKVLILPSKREGFGLVILEANSFKVPSLGRRVGGIREIIRDGKNGY 283
Query: 309 IVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGELG 365
D A L N K ++ G + R+ R YS + +R ++Y +G
Sbjct: 284 TFSALDE---AYEYLKELLNPKKGRKAGAIS-YRISRFYSMEESCKRILKVYEEVVG 336
>pir||T35514 probable glycosyl transferase - Streptomyces coelicolor
>gi|4539201|emb|CAB39859.1| (AL049497) putative glycosyl
transferase [Streptomyces coelicolor A3(2)]
Length = 412
Score = 107 bits (264), Expect = 3e-22
Identities = 107/396 (27%), Positives = 180/396 (45%), Gaps = 54/396 (13%)
Query: 5 KIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVP 64
K +V++ + P+ GG+ +HN+A+ L + + + G+EG D +
Sbjct: 3 KTLIVTNDFPPRPGGIQAFLHNMALRLDP--ERLVVYASTWKRGREGIEATAAFDAEQPF 60
Query: 65 GLIKDGINLSMIAK-SSNSLVEYLKGFDVVHAQH-AFTPLSLKSIPAGNKVGALTLV-TN 121
+++D + + ++ V L+ A PL L + PA + GA LV T
Sbjct: 61 TVVRDRTTMLLPTPGATRRAVGLLREHGCTSVWFGAAAPLGLMA-PALRRAGAERLVATT 119
Query: 122 HSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPI--------- 172
H E G++++ + Q+ IG S ++++L ++T + I
Sbjct: 120 HGHEA-------GWAQLPAAR------QLLRRIGESTDTITYLGEYTRSRIAGALTPGAA 166
Query: 173 ---VEIPNGVNIERFN--GRGREWGTRN-------ILYVGRLEPRKGVNYLISAMKFV-- 218
V++P GV+ + F+ G E R ++ V RL PRKG + LI AM +
Sbjct: 167 ARMVQLPPGVDEKTFHPASGGDEVRARLGFTDRPVVVCVSRLVPRKGQDTLIRAMPRILA 226
Query: 219 ---EGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLS- 274
+ L IVG G K L+ A++ GV V F G + EL Y +VF +P +
Sbjct: 227 AEPDAVLLIVGGGPYEKDLRRLAEETGVAAAVHFTGAVPWSELPAHYGAGDVFAMPCRTR 286
Query: 275 ------EAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAIL 326
E GIV LEA A+ +PV+ GG P+ + G+ G +V D A+ I +L
Sbjct: 287 RGGLDVEGLGIVYLEASATGLPVVAGDSGGAPDAVLDGETGWVVRGEDPNESADRITTLL 346
Query: 327 SNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRG 362
++ + +R+G+ GR VE + WD++AE L +G
Sbjct: 347 ADPELRRRMGERGRAWVEEKWRWDLLAEHLRTLLQG 382
>gi|9755344 N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein;
Spt14p [Saccharomyces cerevisiae]
>gi|1170001|sp|P32363|GPI3_YEAST
N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC
PROTEIN (GLCNAC-PI SYNTHESIS PROTEIN)
>gi|441475|emb|CAA44924.1| (X63290) trans-acting
transcription factor [Saccharomyces cerevisiae]
Length = 452
Score = 106 bits (263), Expect = 3e-22
Identities = 92/383 (24%), Positives = 172/383 (44%), Gaps = 40/383 (10%)
Query: 6 IALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPG 65
IA++ D+++P++GGV H+++L+ L +GH V I+T+A + G+ + VP
Sbjct: 5 IAMLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHVPF 64
Query: 66 LIKDGINLSMIAKSSNSLVEYL---KGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNH 122
+ S+ ++ + + +VH+ + + + + I N +G T+ T+H
Sbjct: 65 FVIFRETTFPTVFSTFPIIRNILLREQIQIVHSHGSASTFAHEGILHANTMGLRTVFTDH 124
Query: 123 SVEFENFSILNGFSKMSYSYFKMYLGQVKVGI-------GVSKASVSFLRKFTNAPIVEI 175
S L GF+ ++ + L I K ++ + + I I
Sbjct: 125 S--------LYGFNNLTSIWVNKLLTFTLTNIDRVICVSNTCKENMIVRTELSPDIISVI 176
Query: 176 PNGVNIERFNGRGREWGTRN--------ILYVGRLEPRKGVNYLISAMKFV-----EGKL 222
PN V E F R GT+ I+ +GRL P KG + L + V + +
Sbjct: 177 PNAVVSEDFKPRDPTGGTKRKQSRDKIVIVVIGRLFPNKGSDLLTRIIPKVCSSHEDVEF 236
Query: 223 TIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLL 282
+ GDG + + ++ +V+ LG + E++ + + ++++ SL+EAFG +L+
Sbjct: 237 IVAGDGPKFIDFQQMIESHRLQKRVQLLGSVPHEKVRDVLCQGDIYLHASLTEAFGTILV 296
Query: 283 EAMASEVPVIGTSVGGIPEIIGDAGIIVPPRDS-----KALANAINAILSNQKTAKRLGK 337
EA + + ++ T VGGIPE++ + + + S +A AIN I S
Sbjct: 297 EAASCNLLIVTTQVGGIPEVLPNEMTVYAEQTSVSDLVQATNKAINIIRSKALDTSSF-- 354
Query: 338 LGRKRVERLYSWDVVAERTERLY 360
V ++Y W VA+RT +Y
Sbjct: 355 --HDSVSKMYDWMDVAKRTVEIY 375
>pir||D70351 probable hexosyltransferase (EC 2.4.1.-) aq_572 [similarity] -
Aquifex aeolicus >gi|2983210|gb|AAC06809.1| (AE000696)
hypothetical protein [Aquifex aeolicus]
Length = 366
Score = 105 bits (260), Expect = 7e-22
Identities = 96/319 (30%), Positives = 154/319 (48%), Gaps = 25/319 (7%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKV 63
+KIAL +D + +GG LA L K G+EV ++T + ++ ++K+
Sbjct: 1 MKIALFTDSFRKDLGGGTQVARQLAFGLSKKGYEVLVITGSTAE------EETPFKVLKL 54
Query: 64 PGLIKDGINLSMIAKSSNSLVEYLKGF--DVVHAQHAFTPLSLKSIPAGNKVGALTLVTN 121
P + + IA + L++ LK F DV+H F ++ ++ G + T+ T
Sbjct: 55 PSIKYPFYHNVEIALPNVELLKELKNFNPDVIHYHDPFLAGTM-ALLMGKILKIPTVGTI 113
Query: 122 H----SVEFENFSILNG-FSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIP 176
H + + I NG +K S+F + V + VSK + + + I
Sbjct: 114 HIHPKQLTYHGIKIDNGVIAKKLVSFFGNFTDCV---VFVSKYQKKLYEELDSFCVKVIY 170
Query: 177 NGVNIERFNGRGREW-GTRN-ILYVGRLEPRKGVNYLISAM----KFVEGKLTIVGDGSM 230
NG+ F R+ RN IL V RL+ K + + + K V + TIVG+G+
Sbjct: 171 NGIPDYFFVSEKRKLRNPRNRILTVSRLDKDKNPEFALKCVAEISKEVPVEYTIVGEGNE 230
Query: 231 RKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVP 290
++ L+ A+KLG+ K FLGF+ +EEL LY +V + S +E FG+ EAMA+ +P
Sbjct: 231 KEKLEKLARKLGI--KANFLGFVPREELPELYLSHDVLLNTSKTETFGLSFAEAMATGMP 288
Query: 291 VIGTSVGGIPEIIGDAGII 309
VI G PEI+GD GI+
Sbjct: 289 VIALKEGSAPEIVGDGGIL 307
>pir||S75454 hypothetical protein slr1508 - Synechocystis sp. (strain PCC 6803)
>gi|1653099|dbj|BAA18015.1| (D90911) hypothetical
protein [Synechocystis sp.]
Length = 389
Score = 104 bits (258), Expect = 1e-21
Identities = 101/347 (29%), Positives = 160/347 (46%), Gaps = 27/347 (7%)
Query: 35 GHEVSIVTNALTNGKEGE-LQKYGIDLIKVPGLIKDGINLSMIAKSSNSLVEYLKGF--D 91
GH+VS + A +EGE L + G + +P L K + +SS L + L D
Sbjct: 30 GHQVSFLHFA--QEEEGEPLAENGCAEVALPFLFKSTVYTIPTPRSSRVLTDALAKLKPD 87
Query: 92 VVHAQHAFTPLSLKSIPAGNKVGALTLVTNH---SVEFENFSILNGFSKMSYSYFKMYLG 148
+VHA +PL + ++G + T H + NFS F ++Y + L
Sbjct: 88 LVHASLTLSPLDFRLPEICEELGLPLIATFHPPFDSKLRNFSSSTQF--LTYQLYAPSLA 145
Query: 149 QVKVGIGVSKASVSFLRKF--TNAPIVEIPNGVNIERF----NGRGREW-GTRNILYVGR 201
Q I S+ + L K + IPNGV +ER+ N +E+ R +Y+GR
Sbjct: 146 QYDKVIIFSRLQRNLLLKLGVPRQRLAIIPNGVAVERYCPGQNDLKKEYQAERLFIYLGR 205
Query: 202 LEPRKGVNYLISAMKFVEG----KLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQE- 256
+ P K V L+ KF + KL +VGDG ++ L+ G E V +LGF++ E
Sbjct: 206 IAPEKNVEALLKGWKFSDMGPHCKLLMVGDGILKSTLQTH---YGPEMGVHWLGFVADEL 262
Query: 257 ELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII-GDAGIIVPPRDS 315
I L + ++ F+LPSL E + LLEAMA + T G E++ AGI++ +
Sbjct: 263 TRIQLLRAADAFILPSLVEGLSLSLLEAMACGTACVATDAGADGEVLENGAGIVLKTQGV 322
Query: 316 KALANAINAIL-SNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYR 361
A + +L + + LG+ R+RV Y++ + E LY+
Sbjct: 323 TAQLKILLPLLRDHPEITDLLGRKARERVLERYTFAANMVQLESLYK 369
>emb|CAB43611.1| (AJ239004) galactosyl transferase [Streptococcus pneumoniae]
Length = 354
Score = 104 bits (258), Expect = 1e-21
Identities = 84/308 (27%), Positives = 145/308 (46%), Gaps = 22/308 (7%)
Query: 69 DGINLSMIAKSSNSLVEYLK---GFDVVHAQHAFTP------LSLKSIPAGNKVGALTLV 119
DG ++ + SS +L++++ +D+ H A L LK + + NK L +
Sbjct: 45 DGSLVTRLTYSSYALLKFVVHSGNYDIYHIHTATRGSCWRKLLYLKLLKSKNKKAILHI- 103
Query: 120 TNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFT-NAPIVEIPNG 178
H EF+ F + + + + L I +S+ F NA IV + NG
Sbjct: 104 --HGAEFQIF--YDSLPEYKKNKVREMLELSDYVIVLSQTWYDFFSNININAKIVIVENG 159
Query: 179 VNIERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFVEG-----KLTIVGDGSMRKV 233
V+ + + + + N L++GR+ RKG LI AM LT+ GDG + +
Sbjct: 160 VDTSFYVEKKKSITSNNFLFLGRMGKRKGAYDLIDAMNQAVAINPNLHLTMAGDGELEDI 219
Query: 234 LKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIG 293
+ + L + D + +++Q + +L++ ++ +LPS +E + +LEAMAS + +I
Sbjct: 220 -RQKISNLNLTDHITIYDWVNQRDKKILFQANQTLILPSYNEGLPMAILEAMASGLAIIS 278
Query: 294 TSVGGIPEII-GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVV 352
T VGGIPEII D G ++ P D L+N I N +G K VE YS+ +
Sbjct: 279 TPVGGIPEIIHEDNGWLIQPGDISQLSNIILEASYNPDVVSLMGSNNHKLVEEKYSFHSM 338
Query: 353 AERTERLY 360
+ +++Y
Sbjct: 339 HGKIKKIY 346
>pir||S65187 GPI-anchor biosynthesis protein PIG-A - yeast (Saccharomyces
cerevisiae) >gi|1370369|emb|CAA97882.1| (Z73531) ORF
YPL175w [Saccharomyces cerevisiae]
Length = 461
Score = 103 bits (255), Expect = 3e-21
Identities = 90/381 (23%), Positives = 170/381 (43%), Gaps = 40/381 (10%)
Query: 8 LVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPGLI 67
++ D+++P++GGV H+++L+ L +GH V I+T+A + G+ + VP +
Sbjct: 16 MLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHVPFFV 75
Query: 68 KDGINLSMIAKSSNSLVEYL---KGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSV 124
S+ ++ + + +VH+ + + + + I N +G T+ T+HS
Sbjct: 76 IFRETTFPTVFSTFPIIRNILLREQIQIVHSHGSASTFAHEGILHANTMGLRTVFTDHS- 134
Query: 125 EFENFSILNGFSKMSYSYFKMYLGQVKVGI-------GVSKASVSFLRKFTNAPIVEIPN 177
L GF+ ++ + L I K ++ + + I IPN
Sbjct: 135 -------LYGFNNLTSIWVNKLLTFTLTNIDRVICVSNTCKENMIVRTELSPDIISVIPN 187
Query: 178 GVNIERFNGRGREWGTRN--------ILYVGRLEPRKGVNYLISAMKFV-----EGKLTI 224
V E F R GT+ I+ +GRL P KG + L + V + + +
Sbjct: 188 AVVSEDFKPRDPTGGTKRKQSRDKIVIVVIGRLFPNKGSDLLTRIIPKVCSSHEDVEFIV 247
Query: 225 VGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEA 284
GDG + + ++ +V+ LG + E++ + + ++++ SL+EAFG +L+EA
Sbjct: 248 AGDGPKFIDFQQMIESHRLQKRVQLLGSVPHEKVRDVLCQGDIYLHASLTEAFGTILVEA 307
Query: 285 MASEVPVIGTSVGGIPEIIGDAGIIVPPRDS-----KALANAINAILSNQKTAKRLGKLG 339
+ + ++ T VGGIPE++ + + + S +A AIN I S
Sbjct: 308 ASCNLLIVTTQVGGIPEVLPNEMTVYAEQTSVSDLVQATNKAINIIRSKALDTSSF---- 363
Query: 340 RKRVERLYSWDVVAERTERLY 360
V ++Y W VA+RT +Y
Sbjct: 364 HDSVSKMYDWMDVAKRTVEIY 384
>prf||1804343A SPT14 gene [Saccharomyces cerevisiae]
Length = 415
Score = 103 bits (255), Expect = 3e-21
Identities = 90/381 (23%), Positives = 170/381 (43%), Gaps = 40/381 (10%)
Query: 8 LVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPGLI 67
++ D+++P++GGV H+++L+ L +GH V I+T+A + G+ + VP +
Sbjct: 1 MLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHVPFFV 60
Query: 68 KDGINLSMIAKSSNSLVEYL---KGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSV 124
S+ ++ + + +VH+ + + + + I N +G T+ T+HS
Sbjct: 61 IFRETTFPTVFSTFPIIRNILLREQIQIVHSHGSASTFAHEGILHANTMGLRTVFTDHS- 119
Query: 125 EFENFSILNGFSKMSYSYFKMYLGQVKVGI-------GVSKASVSFLRKFTNAPIVEIPN 177
L GF+ ++ + L I K ++ + + I IPN
Sbjct: 120 -------LYGFNNLTSIWVNKLLTFTLTNIDRVICVSNTCKENMIVRTELSPDIISVIPN 172
Query: 178 GVNIERFNGRGREWGTRN--------ILYVGRLEPRKGVNYLISAMKFV-----EGKLTI 224
V E F R GT+ I+ +GRL P KG + L + V + + +
Sbjct: 173 AVVSEDFKPRDPTGGTKRKQSRDKIVIVVIGRLFPNKGSDLLTRIIPKVCSSHEDVEFIV 232
Query: 225 VGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEA 284
GDG + + ++ +V+ LG + E++ + + ++++ SL+EAFG +L+EA
Sbjct: 233 AGDGPKFIDFQQMIESHRLQKRVQLLGSVPHEKVRDVLCQGDIYLHASLTEAFGTILVEA 292
Query: 285 MASEVPVIGTSVGGIPEIIGDAGIIVPPRDS-----KALANAINAILSNQKTAKRLGKLG 339
+ + ++ T VGGIPE++ + + + S +A AIN I S
Sbjct: 293 ASCNLLIVTTQVGGIPEVLPNEMTVYAEQTSVSDLVQATNKAINIIRSKALDTSSF---- 348
Query: 340 RKRVERLYSWDVVAERTERLY 360
V ++Y W VA+RT +Y
Sbjct: 349 HDSVSKMYDWMDVAKRTVEIY 369
>pir||G75058 probable hexosyltransferase (EC 2.4.1.-) PAB1410 [similarity] -
Pyrococcus abyssi (strain Orsay)
>gi|5458877|emb|CAB50364.1| (AJ248287) LPS BIOSYNTHESIS
RFBU RELATED PROTEIN. [Pyrococcus abyssi]
Length = 368
Score = 101 bits (249), Expect = 1e-20
Identities = 112/388 (28%), Positives = 182/388 (46%), Gaps = 58/388 (14%)
Query: 4 LKIALVSDWYFPKI-GGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIK 62
++IA + D +P + GGV V+ + L K HEV ++ +G ++
Sbjct: 1 MRIAYIYDAVYPFVKGGVEKRVYEIGTRLSKK-HEVHWIS-----------LDWGGNIPS 48
Query: 63 VPGLIKDGINLSMIAKSSNSLVE--YLKGFDVVHAQHAFTPLSLKSIPA----GNKVGAL 116
+ L K G +S+ + S+ E Y ++ A+ + + + P +KV
Sbjct: 49 IK-LQKVGRGVSLYSGQRRSIREALYFSAKVLLKAKWDYDIIDCQQFPYLPCFSSKV--- 104
Query: 117 TLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQV-KVGIGVSK---------ASVSFLRK 166
HS+ N ++ + ++ Y+K YLG + +GI + K SVS L +
Sbjct: 105 -----HSI-LRNVPMVITWHEIWKEYWKKYLGNMGAIGIQIEKLMSRLTSHHVSVSKLTQ 158
Query: 167 FTNAPI----VEIPNGVNIERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFVEG-- 220
I IPNG++ +R + ++++VGRL K V+ L+ A+K ++
Sbjct: 159 KRLRSIGIDSALIPNGIDFKRIQRVKKLPQEYDVIFVGRLIKEKNVDLLLRAIKLIKDDV 218
Query: 221 ---KLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLY-KKSEVFVLPSLSEA 276
K+ I+G+G + L KL + + V+F+ F++ E ++ Y K S+VFVLPS E
Sbjct: 219 PDLKVLIIGEGPEKYRLLTLVSKLELTENVKFISFLNDYEKLIAYLKSSKVFVLPSKREG 278
Query: 277 FGIVLLEAMASEVPVIGTS--VGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTA 332
FGI++LEA AS VPVI + ++I G G I PP S +LA I LS K
Sbjct: 279 FGIIVLEANASGVPVITLDYPLNASRDLITHGYNGFISPPNPS-SLAEYIELSLSLGKKF 337
Query: 333 KRLGKLGRKRVERLYSWDVVAERTERLY 360
KR + R Y WD + + TERLY
Sbjct: 338 KR----NCIKNARRYDWDNITQLTERLY 361
>gb|AAG19463.1| (AE005039) Vng1059c [Halobacterium sp. NRC-1]
Length = 398
Score = 100 bits (247), Expect = 2e-20
Identities = 92/324 (28%), Positives = 144/324 (44%), Gaps = 27/324 (8%)
Query: 57 GIDLIKVPGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGAL 116
GI + L + G +L + + ++ + DV++A H TP +I A N G
Sbjct: 86 GISSPRAFSLKQIGHSLLLARRCLEAIADLDLEIDVINA-HFATPTRAGAIHASNHAGIP 144
Query: 117 TLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRK---FTNAPIV 173
+VT H+ E F + + V + S+ + +LR TN I
Sbjct: 145 CIVTAHAYEI--------FRNPDFEKIRRICHGVDHVVVPSEYNRQYLRNEAAVTN-DIS 195
Query: 174 EIPNGVNIERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFV-----EGKLTIVGDG 228
IP E+F G R +L V RL +KG Y + A+ + + + I+G G
Sbjct: 196 VIPATTKTEKFEPSGEPVEDR-LLTVARLVEKKGHKYALEAVSQLVAQGYDVEYHIIGQG 254
Query: 229 SMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSL------SEAFGIVLL 282
+ LK A LG+ V FL +S E L ++ +FVLP + +A +VL
Sbjct: 255 KLEPQLKQYASDLGISSHVAFLDHVSDETLRNELNEAALFVLPCVIAENGDRDAMPVVLK 314
Query: 283 EAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGR 340
EAMASE + TSV IPE+I G+ G++VPPRD + LA AI +L + + GR
Sbjct: 315 EAMASETACVSTSVSAIPELITDGEDGLLVPPRDVEQLAAAIQRLLDDPTLRGEIETRGR 374
Query: 341 KRVERLYSWDVVAERTERLYRGEL 364
+ V + + ++R E+
Sbjct: 375 QTVHETFDIAQSIDDLLAVFRSEI 398
>dbj|BAB06407.1| (AP001516) alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol
monomannoside transferase [Bacillus halodurans]
Length = 381
Score = 100 bits (246), Expect = 3e-20
Identities = 95/360 (26%), Positives = 155/360 (42%), Gaps = 32/360 (8%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKV 63
++IAL +D Y P++ GVA + L HL K E ++ T K + +
Sbjct: 1 MRIALFTDTYIPQVNGVARTMKRLVDHLEKRQVEYALYMPE-TIEKLDRFESNIHTFASL 59
Query: 64 PGLIKDGINLSM--IAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTN 121
P + +++ + K L + D++H F + L + G K G + +V +
Sbjct: 60 PFFLYPECRIALPNVFKLRQQLTSFQP--DLLHIATPFN-VGLSGLQHGKKYG-IPMVGS 115
Query: 122 HSVEFENFSILNGFSKMS---YSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNG 178
+ F+++ MS + Y K + + S ++ L+K + G
Sbjct: 116 YHTHFDHYLHYYKLQFMSAWLWKYVKWFHQPFERTFVPSVETMRHLQKHGFQRLALWTRG 175
Query: 179 VNIERFNGRGREWG---------TRNILYVGRLEPRKGVNYLISAMKFVEGKLT------ 223
V+ ERF+ + R +LYVGRL P K + L++ M + +L
Sbjct: 176 VDCERFHPKQRHRSYAINLLPKDKAVLLYVGRLAPEKDLATLVAIMSLLPRELNEKIQWM 235
Query: 224 IVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLE 283
IVGDG +K Q V F G++ EEL Y +++FV PS +E FG V+LE
Sbjct: 236 IVGDGPSLPEMKKQCPS-----NVTFTGYLKGEELAAAYASADLFVFPSATETFGNVVLE 290
Query: 284 AMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRK 341
A AS P I GG+ EI+ G +G+I D+ AI +L N+ +G R+
Sbjct: 291 AFASGTPAIVADRGGVTEIVEHGKSGMICKAGDAHTFIQAIEHLLMNRSKRAEMGYEARQ 350
>pir||A70571 probable hexosyltransferase (EC 2.4.1.-) Rv2610c [similarity] -
Mycobacterium tuberculosis (strain H37RV)
>gi|2104303|emb|CAB08632.1| (Z95387) hypothetical
protein Rv2610c [Mycobacterium tuberculosis]
Length = 378
Score = 100 bits (246), Expect = 3e-20
Identities = 106/383 (27%), Positives = 179/383 (46%), Gaps = 35/383 (9%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKV 63
++I ++ + F GGV HV LA +R GH VS++ A + + G + +
Sbjct: 1 MRIGMICPYSFDVPGGVQSHVLQLAEVMRTRGHLVSVLAPASPHAALPDYFVSGGRAVPI 60
Query: 64 P--GLIKDGINLSMIAKSSNSLVEYLK--GFDVVHAQHAFTPLSLKSIPAGNKVGALTLV 119
P G + L + + ++L FDV+H P SL + G + +
Sbjct: 61 PYNGSV---ARLRFGPATHRKVKKWLAHGDFDVLHLHEPNAP-SLSMLALNIAEGPI-VA 115
Query: 120 TNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGV 179
T H+ ++ + L F + + +G+ I VS + + + + VEIPNGV
Sbjct: 116 TFHTSTTKSLT-LTVFQGILRPMHEKIVGR----IAVSDLARRWQMEALGSDAVEIPNGV 170
Query: 180 NIERFNGRGREWG----TRNILYVGRL-EPRKGVNYLISAM-----KFVEGKLTIVGDGS 229
+++ F R G + +L++GR EPRKG+ L+ A+ +F + +L IVG G
Sbjct: 171 DVDSFASAARLDGYPRQGKTVLFLGRYDEPRKGMAVLLDALPKVVQRFPDVQLLIVGHGD 230
Query: 230 MRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSL-SEAFGIVLLEAMASE 288
+ L+ QA +L + FLG + + ++V+ P+ E+FGIVL+EAMA+
Sbjct: 231 ADQ-LRGQAGRLAAH--LRFLGQVDDAGKASAMRSADVYCAPNTGGESFGIVLVEAMAAG 287
Query: 289 VPVIGTSVGGIPEII--GDAGIIVP--PRD--SKALANAINAILSNQKTAKRLGKLGRKR 342
V+ + + ++ G+ G +VP P D + ALA+ + A+L N +R G
Sbjct: 288 TAVVASDLDAFRRVLRDGEVGHLVPVDPPDLQAAALADGLIAVLENDVLRERYVAAGNAA 347
Query: 343 VERLYSWDVVAERTERLYRGELG 365
V R Y W VVA + R+Y G
Sbjct: 348 VRR-YDWSVVASQIMRVYETVAG 369
>pir||S28485 lipopolysaccharide biosynthesis protein RfbV VC0259 precursor
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|48400|emb|CAA42151.1| (X59554) possible outer
membrane protein [Vibrio cholerae]
>gi|9654668|gb|AAF93434.1| (AE004114) lipopolysaccharide
biosynthesis protein RfbV [Vibrio cholerae]
Length = 410
Score = 98.7 bits (242), Expect = 1e-19
Identities = 94/363 (25%), Positives = 164/363 (44%), Gaps = 24/363 (6%)
Query: 18 GGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPGLIKDGINLSMIA 77
GGV + +A + +G E I+T L++ + G ++I V I+ N
Sbjct: 56 GGVEQVIRFIASGTKPLGIETKILT--LSDNQTSSYYCEGTEIISVKKSIEISSN-GFSW 112
Query: 78 KSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFENFSILNGFSK 137
K + K D++H + + S+ + ++VT HS + +
Sbjct: 113 KLIRQFKKLSKWADIIHYHYPWPTGDFLSLFGSSNP---SIVTYHSDIIRQKCLKKLYQP 169
Query: 138 MSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVE---------IPNGVNIERFNGRG 188
+ + V + S + LR I+ IP+ NI ++
Sbjct: 170 LESHFLNQANILVATSPQYAHTSENLLRHKNKVKIIPLAVDENTYPIPSNDNINKWR--- 226
Query: 189 REWGTRNILYVGRLEPRKGVNYLISAMKFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVE 248
+ G L+VG L KG+++L+ A K + + I GDG R L+ K +E+ V+
Sbjct: 227 EKVGEGFFLFVGVLRYYKGLDFLLEAAKINQLPVIIAGDGPERVKLESYIAKHNLEN-VK 285
Query: 249 FLGFISQEELILLYKKSEVFVLPS--LSEAFGIVLLEAMASEVPVIGTSVG---GIPEII 303
+GFIS+E+ ++L+ S+ FV PS SEAFGI L+EA +I + +G I
Sbjct: 286 LVGFISEEDKVILHLLSKAFVFPSHLRSEAFGISLIEAQMYCKAIISSDIGTGSSYVNIN 345
Query: 304 GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGE 363
G+ G++VPP DS++ ++A+ I + K ++LG RKR E+ ++ A+ +LY
Sbjct: 346 GETGLVVPPADSQSFSDAMLKIEHDTKLCEKLGINARKRFEQEFTAHRYAQSYTKLYSEL 405
Query: 364 LGD 366
G+
Sbjct: 406 FGN 408
>emb|CAA69126.1| (Y07788) RfbV [Vibrio cholerae]
Length = 370
Score = 98.7 bits (242), Expect = 1e-19
Identities = 94/363 (25%), Positives = 164/363 (44%), Gaps = 24/363 (6%)
Query: 18 GGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPGLIKDGINLSMIA 77
GGV + +A + +G E I+T L++ + G ++I V I+ N
Sbjct: 16 GGVEQVIRFIASGTKPLGIETKILT--LSDNQTSSYYCEGTEIISVKKSIEISSN-GFSW 72
Query: 78 KSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFENFSILNGFSK 137
K + K D++H + + S+ + ++VT HS + +
Sbjct: 73 KLIRQFKKLSKWADIIHYHYPWPTGDFLSLFGSSNP---SIVTYHSDIIRQKCLKKLYQP 129
Query: 138 MSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVE---------IPNGVNIERFNGRG 188
+ + V + S + LR I+ IP+ NI ++
Sbjct: 130 LESHFLNQANILVATSPQYAHTSENLLRHKNKVKIIPLAVDENTYPIPSNDNINKWR--- 186
Query: 189 REWGTRNILYVGRLEPRKGVNYLISAMKFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVE 248
+ G L+VG L KG+++L+ A K + + I GDG R L+ K +E+ V+
Sbjct: 187 EKVGEGFFLFVGVLRYYKGLDFLLEAAKINQLPVIIAGDGPERVKLESYIAKHNLEN-VK 245
Query: 249 FLGFISQEELILLYKKSEVFVLPS--LSEAFGIVLLEAMASEVPVIGTSVG---GIPEII 303
+GFIS+E+ ++L+ S+ FV PS SEAFGI L+EA +I + +G I
Sbjct: 246 LVGFISEEDKVILHLLSKAFVFPSHLRSEAFGISLIEAQMYCKAIISSDIGTGSSYVNIN 305
Query: 304 GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGE 363
G+ G++VPP DS++ ++A+ I + K ++LG RKR E+ ++ A+ +LY
Sbjct: 306 GETGLVVPPADSQSFSDAMLKIEHDTKLCEKLGINARKRFEQEFTAHRYAQSYTKLYSEL 365
Query: 364 LGD 366
G+
Sbjct: 366 FGN 368
>pir||C72590 probable hexosyltransferase (EC 2.4.1.-) APE1191 [similarity] -
Aeropyrum pernix (strain K1) >gi|5104863|dbj|BAA80177.1|
(AP000061) 363aa long hypothetical capM protein
[Aeropyrum pernix]
Length = 363
Score = 97.9 bits (240), Expect = 2e-19
Identities = 91/350 (26%), Positives = 168/350 (48%), Gaps = 24/350 (6%)
Query: 15 PKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPGLIKDGINLS 74
P+ GG + ++ +A L KMGHEV ++ ++ GE GI + + G +
Sbjct: 14 PQAGGAEVRLYEIARRLVKMGHEVMVLCEKVSR-LPGEEVLEGIRIKRSGGRASIHLLAP 72
Query: 75 MIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFENFSILNG 134
+ + + + D+ HA ++PL K+ V + V V E L
Sbjct: 73 LYVRKHGHEYDVIVD-DIAHAVPWYSPLVTKT----PVVAQIHHVHQDVVYIELPKPLAW 127
Query: 135 F-SKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAP---IVEIPNGVNIERFNGRGRE 190
S+ + K+Y + I VS+++ L K I +PNGV++E++ ++
Sbjct: 128 IVSRAEKTIAKIY----RRFIAVSQSTKKELAKRLGIDPDRIAVVPNGVDLEKYRPGSKD 183
Query: 191 WGTRNILYVGRLEPRKGVNYLISAMKFV-----EGKLTIVGDGSMRKVLKMQAKKLGVED 245
IL+ GR++ K +++L+ A + V + +L I+G G + ++ AKKL D
Sbjct: 184 -PRPTILWAGRIKMYKNLDHLLKAYRIVKQEIPDAQLIIIGTGDQEQKMRELAKKLEPRD 242
Query: 246 KVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIG- 304
V FLG +S++E I+ +++ + V S+ E +GI + EA A ++P I +V G+ + +
Sbjct: 243 -VHFLGKMSEQEKIMWMQRAWIIVSTSMIEGWGITITEAAACKIPAIAYNVPGLRDSVKH 301
Query: 305 -DAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVA 353
+ GI+V P + + LA AI +L++ +L + + +SWD A
Sbjct: 302 METGILVEPGNIEQLAKAIAWLLTDNSLRNKLSE-NAYNYAQSFSWDNTA 350
>emb|CAA18697.1| (AL022602) hypothetical protein MLCB268.31c [Mycobacterium leprae]
Length = 384
Score = 96.3 bits (236), Expect = 5e-19
Identities = 106/397 (26%), Positives = 173/397 (42%), Gaps = 58/397 (14%)
Query: 5 KIALVSDWYFPKIGGVAIHVHNLAIHLRKMG-HEVSIVTNALTNGK--EGELQKYGIDLI 61
++ LV++ + P+ GG+ ++ L +G H+V + T + G ++
Sbjct: 3 RVLLVTNDFPPRRGGIQSYLGEFVDRLINIGSHDVMVYAPQWTGADTFDNAAHDGGYQVV 62
Query: 62 KVPG-LIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGAL-TLV 119
+ PG L+ G + A+ +V++ G D V A PL+L + P K GA L
Sbjct: 63 RHPGTLMLPGPAVD--ARMRRLIVDH--GIDTVWFGSA-APLALLA-PCARKAGATRVLA 116
Query: 120 TNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVE----- 174
+ H E G+S + + V IG V+F+ ++T + +
Sbjct: 117 STHGHEV-------GWSMLPVAR------SVLRRIGDVTDVVTFVSRYTRSRVTAAFGPR 163
Query: 175 -----IPNGVNIERFN----------GRGREWGTRNILYVGRLEPRKGVNYLISAMKFVE 219
+P GV+ +RF R R ++ + RL PRKG + LI A+ +
Sbjct: 164 AALEYLPPGVDADRFRPDPASRAELRNRYRLGERPTVVCLARLVPRKGQDMLIRALPSIR 223
Query: 220 GK-----LTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLS 274
+ L IVG G L+ A+ GV D V F G ++ E+ Y ++VF +P +
Sbjct: 224 QRADGAALMIVGGGPYLGTLRKLAQGCGVADHVIFAGGVAAVEVPAHYTLADVFAMPCRT 283
Query: 275 -------EAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAI 325
E GIV LEA A+ VPVI GG PE + G++V R +A+A+ +
Sbjct: 284 RGGGMDVEGLGIVFLEASATGVPVIAGKSGGAPEAVQHNKTGLVVDGRSVNMVADAVTEL 343
Query: 326 LSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRG 362
L+++ A +G GR V + WD +A R L G
Sbjct: 344 LTDRDRAAAMGAAGRHWVTAEWRWDTLAARLADLLCG 380
>emb|CAB93438.1| (AL357591) putative glycosyl transferase [Streptomyces coelicolor
A3(2)]
Length = 498
Score = 96.3 bits (236), Expect = 5e-19
Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
Query: 204 PRKGVNYLISAM-----KFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEEL 258
P KG+ +L+ A+ + L +VG + ++ G+ VEF+ IS EL
Sbjct: 265 PLKGLVFLVEALAKARTEHPRAHLVVVGKRPAEGPVAQAIERYGLAGAVEFVKGISDAEL 324
Query: 259 ILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAG---IIVPPRDS 315
+ L + +EV +PSL E F + EAMA+ ++ T+ G +PE+ G G + VPP D+
Sbjct: 325 VDLVRSAEVACVPSLYEGFSLPAAEAMATGTALLATTGGAVPEVAGPDGETCLAVPPGDA 384
Query: 316 KALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGELG 365
ALA +N +L ++ RLG GR+RV R ++W AE T YR +G
Sbjct: 385 DALAAGLNRLLGDRSLRARLGAAGRERVLRHFTWARAAEGTVARYREAIG 434
>dbj|BAB07095.1| (AP001518) lipopolysaccharide biosynthesis [Bacillus halodurans]
Length = 397
Score = 95.6 bits (234), Expect = 8e-19
Identities = 91/400 (22%), Positives = 178/400 (43%), Gaps = 48/400 (12%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGI---DL 60
++I + + W +P +GG+ ++ L+ L + G+ V I + L+ Y + D+
Sbjct: 1 MRILIATYWSYPSLGGITTYIKELSQQLMRNGYHVDIFS------LHPSLKSYYVVNSDV 54
Query: 61 IKVPGLIKDGINLSMIAKSSNSLVEY----------------LKGFDVVHAQHAFTPLSL 104
+K I+ + S+ + Y L +D++H Q F+
Sbjct: 55 KFSKKKMKAMISNQNASLPSDLWMRYQEIERSCYEAAASQLPLNQYDLIHTQDIFSTNIF 114
Query: 105 KSIPAGNKVGALTLVTNHSVEFENFSILNGFS---KMSYSYFKMYLGQVKVGIGVSKASV 161
I N T+ S E + I+ + K S + L + + I S
Sbjct: 115 SRIKPKNVPLVTTVHGCFSTEMIRYGIIKKNTERWKYSTEFESRALSESQHIITPSNWLN 174
Query: 162 SFLRKF---TNAPIVEIPNGVNIERFNGRGREW------GTRNILY--VGRLEPRKGVNY 210
+L++ I + NG+++ F + + ++ I+ + RL P KG Y
Sbjct: 175 HYLKELFCLKGVRITTVHNGLSVSSFLSKLNQAFHPPSSQSKKIVLSCIARLTPLKGHIY 234
Query: 211 LISAM-----KFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKS 265
L+ A+ ++ + +G+G ++K L + +KL +++ V+FLGF Q+++ ++
Sbjct: 235 LLDALAELKKNTLDWECWFIGNGEIKKKLVNKTRKLNLQNHVKFLGF--QKDIPNSLNQT 292
Query: 266 EVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGD--AGIIVPPRDSKALANAIN 323
++ +LPSL E V++EA S PVI T VGGIPE+I G++ PP+DS L I
Sbjct: 293 DILILPSLQENLPYVIMEAQISGTPVIATHVGGIPEMIEPFRTGLLSPPKDSDTLYKNIQ 352
Query: 324 AILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGE 363
+L N+ + + ++ E+ ++ + + +Y+ E
Sbjct: 353 LLLQNKTLKTDIIRSAKEFGEKQWAIERTTKEVNAIYQEE 392
>pir||F70346 mannosyltransferase C - Aquifex aeolicus >gi|2983151|gb|AAC06753.1|
(AE000693) mannosyltransferase C [Aquifex aeolicus]
Length = 368
Score = 95.6 bits (234), Expect = 8e-19
Identities = 89/282 (31%), Positives = 141/282 (49%), Gaps = 43/282 (15%)
Query: 88 KGFDVVHAQHAFTPLS-LKSIPAGNKVGALTLVTNHSVEFENFSILNGFSKMSYSYFK-M 145
K +D++H H+ PL+ + S+ + KV A + + + F+ Y F+ M
Sbjct: 81 KNYDIIHV-HSPNPLAEILSLFSHKKVVA---------HWHSDIVRQKFTYFFYKPFQHM 130
Query: 146 YLGQVKVGIGVSKASVSFLRK------FTNAPIVEIPNGVNIERFNG-----------RG 188
YL K I + S +L+ F N +V IP G+N +R
Sbjct: 131 YL---KKAIRIICTSPQYLQTSKQLEGFRNKAVV-IPLGLNPKRLMSDYVDEKFKDFIEL 186
Query: 189 REWGTRNILYVGRLEPRKGVNYLISAMKFVEGKLTIV--GDGSMRKVLKMQAKKLGVEDK 246
+ G + +L +GRL KG YLI A K++ ++IV G G + + L+ + + L +++K
Sbjct: 187 KNKGRKIVLSIGRLVEYKGYKYLIEAAKYINNNISIVIAGSGPLFQSLEEKIETLNLKEK 246
Query: 247 VEFLGFISQEELILLYKKSEVFVLPSLS--EAFGIVLLEAMASEVPVIGTSV--GGIPEI 302
V G I+ L + K +VF LPS++ EAFG+VL+EA+ P+I T V GI +
Sbjct: 247 VFLFGRINNVSLYM--KNCDVFCLPSITRNEAFGLVLVEALYFGKPLITTDVEGSGISYV 304
Query: 303 I--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKR 342
G G++V P+D KALA AIN IL N+ K+ + +KR
Sbjct: 305 NQNGITGLVVKPKDPKALAEAINKILKNENLYKQFSENAKKR 346
>emb|CAB50741.1| (AJ243803) putative glycosyl transferase [Streptomyces coelicolor
A3(2)] >gi|6522847|emb|CAB61928.1| (AL133278) putative
glycosyl transferase [Streptomyces coelicolor A3(2)]
Length = 387
Score = 95.6 bits (234), Expect = 8e-19
Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 16/181 (8%)
Query: 196 ILYVGRLEPRKGVNYLISAMKFVE--GKLTIVGDGSMRKVLKMQAKKL--GVEDKVEFLG 251
+L+VGR+ +KGV L+ A++ ++ ++ + + + + L G+ E +
Sbjct: 200 VLFVGRITRQKGVPQLLRAVRDIDPAAQVVLCAGAPDTPEIDQEFRDLFAGLSRAREGVH 259
Query: 252 FISQ----EELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGD-- 305
+I + E+I L + VFV PS+ E GIV LEAMA PV+ + VGGIPE++ D
Sbjct: 260 WIPRMLPRTEVIQLLTHAAVFVCPSVYEPLGIVNLEAMACGTPVVASRVGGIPEVVTDGV 319
Query: 306 AGIIVPPRD------SKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERL 359
G++VP D LA A++++L + A+R+G+ GR R + WD VA RT RL
Sbjct: 320 TGVLVPREDGADDAFEAGLARALDSVLGDPAGARRMGEAGRARAVEEFGWDAVARRTVRL 379
Query: 360 Y 360
Y
Sbjct: 380 Y 380
>gb|AAB84956.1| (AE000829) LPS biosynthesis RfbU related protein [Methanobacterium
thermoautotrophicum]
Length = 411
Score = 94.4 bits (231), Expect = 2e-18
Identities = 84/268 (31%), Positives = 125/268 (46%), Gaps = 30/268 (11%)
Query: 88 KGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFENFSILNGF-SKMSYSYFKMY 146
K FDV+HA + F P + G +VT H + + N SK+S +
Sbjct: 120 KPFDVIHAHYLF-PTGFIGLLCHWISGKPLVVTVHGSDVNKLARKNSLLSKISGFILRRT 178
Query: 147 LGQVKVG----------IGVSKASVSFLRKFTNAPIVEIPNGVNIERFNGR---GREWGT 193
+ V GV + V + + I + ++R R G
Sbjct: 179 SAVIAVSRDLGEKVVNEFGVDRGKVHVINMGVDTDIF-----MPLDRDECRERLGLPLKG 233
Query: 194 RNILYVGRLEPRKGVNYLISAMKFVE---GKLTIVG---DGSMRKVLKMQAKKLGVEDKV 247
R +L+VG + P KGV YLI ++K +E K I+G D + L+ A+ + + V
Sbjct: 234 RVVLFVGNIIPSKGVYYLIESLKDLELDDVKCIILGAPVDEEYLRTLRGLAESM--DSDV 291
Query: 248 EFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDA- 306
EF G + E+ ++VFVLPSL E FG+V LEA+A PVI T+ GGI E + D+
Sbjct: 292 EFFGPVPYTEVPTWMNAADVFVLPSLEEGFGLVALEALACGTPVIATATGGIMEFVRDSE 351
Query: 307 -GIIVPPRDSKALANAINAILSNQKTAK 333
G VPP DS+A+A+ I IL + A+
Sbjct: 352 TGYTVPPGDSRAIADRIKRILDPENRAE 379
>pir||H69158 LPS biosynthesis RfbU related protein - Methanobacterium
thermoautotrophicum (strain Delta H)
Length = 411
Score = 94.4 bits (231), Expect = 2e-18
Identities = 84/268 (31%), Positives = 125/268 (46%), Gaps = 30/268 (11%)
Query: 88 KGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFENFSILNGF-SKMSYSYFKMY 146
K FDV+HA + F P + G +VT H + + N SK+S +
Sbjct: 120 KPFDVIHAHYLF-PTGFIGLLCHWISGKPLVVTVHGSDVNKLARKNSLLSKISGFILRRT 178
Query: 147 LGQVKVG----------IGVSKASVSFLRKFTNAPIVEIPNGVNIERFNGR---GREWGT 193
+ V GV + V + + I + ++R R G
Sbjct: 179 SAVIAVSRDLGEKVVNEFGVDRGKVHVINMGVDTDIF-----MPLDRDECRERLGLPLKG 233
Query: 194 RNILYVGRLEPRKGVNYLISAMKFVE---GKLTIVG---DGSMRKVLKMQAKKLGVEDKV 247
R +L+VG + P KGV YLI ++K +E K I+G D + L+ A+ + + V
Sbjct: 234 RVVLFVGNIIPSKGVYYLIESLKDLELDDVKCIILGAPVDEEYLRTLRGLAESM--DSDV 291
Query: 248 EFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDA- 306
EF G + E+ ++VFVLPSL E FG+V LEA+A PVI T+ GGI E + D+
Sbjct: 292 EFFGPVPYTEVPTWMNAADVFVLPSLEEGFGLVALEALACGTPVIATATGGIMEFVRDSE 351
Query: 307 -GIIVPPRDSKALANAINAILSNQKTAK 333
G VPP DS+A+A+ I IL + A+
Sbjct: 352 TGYTVPPGDSRAIADRIKRILDPENRAE 379
>pir||I76777 Mannosyltransferase (EC 5.-.-.-) C - Escherichia coli
>gi|598472|dbj|BAA07752.1| (D43637) mannosyltransferase
C [Escherichia coli]
Length = 274
Score = 93.2 bits (228), Expect = 4e-18
Identities = 73/261 (27%), Positives = 130/261 (48%), Gaps = 21/261 (8%)
Query: 115 ALTLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSK---ASVSFLRKFTNAP 171
A T+VT HS + ++ + + + +L V + S AS L+K+ +
Sbjct: 12 ARTVVTYHSDIVKQKRLMKLYQPLQ----ERFLASVDCIVASSPNYVASSQTLKKYQDKT 67
Query: 172 IVEIPNGV---NIERFNGRGREW----GTRNILYVGRLEPRKGVNYLISAMKFVEGKLTI 224
+V IP G+ +++ + R W G L+VG KG++ L+ A + + I
Sbjct: 68 VV-IPFGLEQHDVQHDSQRVAHWRETVGDNFFLFVGAFRYYKGLHILLDAAERSRLPVVI 126
Query: 225 VGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPS--LSEAFGIVLL 282
VG G + ++ +A++ G+ + V F G ++ E+ +L++ V PS SEAFGI LL
Sbjct: 127 VGGGPLEAEVRREAQQRGLSNVV-FTGMLNDEDKYILFQLCRGVVFPSHLRSEAFGITLL 185
Query: 283 EAMASEVPVIGTSVGGIPEIIGD---AGIIVPPRDSKALANAINAILSNQKTAKRLGKLG 339
E P+I +G I +G ++PP DS+AL A+N + +N++T+ R G+
Sbjct: 186 EGARFARPLISCEIGTGTSFINQDKVSGCVIPPNDSQALVEAMNELWNNEETSNRYGENS 245
Query: 340 RKRVERLYSWDVVAERTERLY 360
R+R E +++ D + + LY
Sbjct: 246 RRRFEEMFTADHMIDAYVNLY 266
>pir||A82265 probable polysaccharide biosynthesis protein VC0925 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655382|gb|AAF94087.1| (AE004175) polysaccharide
biosynthesis protein, putative [Vibrio cholerae]
Length = 365
Score = 92.8 bits (227), Expect = 5e-18
Identities = 55/172 (31%), Positives = 95/172 (54%), Gaps = 8/172 (4%)
Query: 196 ILYVGRLEPRKGVNYLISAMKFV-----EGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFL 250
I ++GRL RKGV LI A V E +L + GDG + M A++LG+ V L
Sbjct: 189 IAFLGRLGTRKGVGDLIQAFALVKQRCPEAQLYLAGDGEIETYQAM-AEQLGLNGSVHCL 247
Query: 251 GFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGI 308
G+I+ E + L +++++ LPS +E F + ++EAM++ +PV+ + GGIP+ I G+ G
Sbjct: 248 GWIAGEAKLKLLTQTDIYCLPSYNEGFPMGVIEAMSAGIPVVASRAGGIPDAISDGEQGR 307
Query: 309 IVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY 360
++ D ALA A+ ++ + +R+ +++ +S V R + LY
Sbjct: 308 LIEAGDVVALAQALGDLIEQRAENQRIATAAKQKFAENFSLQAVIPRLQTLY 359
>pir||F70937 hypothetical protein Rv2188c - Mycobacterium tuberculosis (strain
H37RV) >gi|2911108|emb|CAA17492.1| (AL021957)
hypothetical protein Rv2188c [Mycobacterium
tuberculosis]
Length = 399
Score = 92.4 bits (226), Expect = 7e-18
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 24/218 (11%)
Query: 170 APIVEIPNGVNIERFNG----------RGREWGTRNILYVGRLEPRKGVNYLISAMKFVE 219
A + +P GV+ +RF R R ++ + RL PRKG + L++A+ +
Sbjct: 178 ASLEYLPPGVDTDRFRPDPAARAELRKRYRLGERPTVVCLSRLVPRKGQDTLVTALPSIR 237
Query: 220 GK-----LTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLS 274
+ L IVG G + L+ A GV D V F G ++ +EL + ++VF +P +
Sbjct: 238 RRVDGAALVIVGGGPYLETLRKLAHDCGVADHVTFTGGVATDELPAHHALADVFAMPCRT 297
Query: 275 -------EAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAI 325
E GIV LEA A+ VPVI + GG PE + G++V R +A+A+ +
Sbjct: 298 RGAGMDVEGLGIVFLEASAAGVPVIAGNSGGAPETVQHNKTGLVVDGRSVDRVADAVAEL 357
Query: 326 LSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGE 363
L ++ A +G GR+ V + WD +A + RG+
Sbjct: 358 LIDRDRAVAMGAAGREWVTAQWRWDTLAAKLADFLRGD 395
>dbj|BAA28305.1| (AB009327) mannosyl transferase [Escherichia coli]
Length = 274
Score = 92.4 bits (226), Expect = 7e-18
Identities = 63/214 (29%), Positives = 112/214 (51%), Gaps = 14/214 (6%)
Query: 159 ASVSFLRKFTNAPIVEIPNGV---NIERFNGRGREW----GTRNILYVGRLEPRKGVNYL 211
AS L+K+ + +V IP G+ +++ R W G + L+VG KG++ L
Sbjct: 55 ASSQTLKKYLDKTVV-IPFGLEQHDVQHDPQRVAHWRETVGDKFFLFVGTFRYYKGLHIL 113
Query: 212 ISAMKFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLP 271
+ A + + +VG G + ++ +A++ G+ + V F G ++ E+ +L++ V P
Sbjct: 114 MDAAECSRLPVVVVGGGPLESEVRREAQQRGLSN-VMFTGMLNDEDKYILFQLCRGVVFP 172
Query: 272 S--LSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGD---AGIIVPPRDSKALANAINAIL 326
S SEAFGI LLE P+I +G I +G ++PP DS+AL A+N +
Sbjct: 173 SHLRSEAFGITLLEGARFARPLISCEIGTGTSFINQDKVSGCVIPPNDSQALVEAMNELW 232
Query: 327 SNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY 360
+N++T+ R G+ R+R E +++ D + + LY
Sbjct: 233 NNEETSNRYGENSRRRFEEMFTADHMIDAYVNLY 266
>gb|AAB08106.1| (U68035) HepB [Anabaena sp.]
Length = 389
Score = 92.1 bits (225), Expect = 9e-18
Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 154 IGVSKASVSFLRKFTNAP---IVEIPNGVNIERFNG--------RGREWG-TRNILYVGR 201
I +SKA + L + P I IP GVNI++F + W +R IL+ R
Sbjct: 161 IVLSKAFGNILHQQYQIPWHKIHIIPGGVNIDKFQPNLSRQQARQQLNWPESRPILFTSR 220
Query: 202 -LEPRKGVNYLISAMKFVEGKL-----TIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQ 255
L R GV+ L+ A+ ++ KL I G G ++ L+ QA++LG+E+ V+FLGF+
Sbjct: 221 RLVHRVGVDKLLQALAIIKPKLPDIWLAIAGRGHLQTTLEKQAQELGLENNVKFLGFLPD 280
Query: 256 EELILLYKKSEVFVLPSLS-EAFGIVLLEAMASEVPVIGTSVGGIPEIIG--DAGIIVPP 312
E+L + Y+ + + V+PS S E FG+ + E++A PV+ T +GG+PEI+ +I
Sbjct: 281 EQLPIAYQAANLTVMPSQSFEGFGLAITESLACGTPVLCTPIGGMPEILTPFSPQLITAS 340
Query: 313 RDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERL 359
++ A+A I IL Q K + R+ + W +A++ ++
Sbjct: 341 PEATAIAEKIAQILLEQ-IPKPSREECRQYAVTNFDWQKIAQQVRQV 386
>dbj|BAA28289.1| (AB009319) mannosyl transferase [Escherichia coli]
>gi|3142163|dbj|BAA28291.1| (AB009320) mannosyl
transferase [Escherichia coli]
>gi|3142166|dbj|BAA28293.1| (AB009321) mannosyl
transferase [Escherichia coli]
>gi|3142169|dbj|BAA28295.1| (AB009322) mannosyl
transferase [Escherichia coli]
Length = 274
Score = 92.1 bits (225), Expect = 9e-18
Identities = 73/261 (27%), Positives = 129/261 (48%), Gaps = 21/261 (8%)
Query: 115 ALTLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSK---ASVSFLRKFTNAP 171
A T+VT HS + ++ + + + +L V + S AS L+K+ +
Sbjct: 12 ARTVVTYHSDIVKQKRLMKLYQPLQ----ERFLASVDCIVASSPNYVASSQTLKKYQDKT 67
Query: 172 IVEIPNGV---NIERFNGRGREW----GTRNILYVGRLEPRKGVNYLISAMKFVEGKLTI 224
+V IP G+ +++ R W G L+VG KG++ L+ A + + I
Sbjct: 68 VV-IPFGLEQHDVQHDPQRVAHWRETVGDNFFLFVGAFRYYKGLHILLDAAERSRLPVVI 126
Query: 225 VGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPS--LSEAFGIVLL 282
VG G + ++ +A++ G+ + V F G ++ E+ +L++ V PS SEAFGI LL
Sbjct: 127 VGGGPLEAEVRREAQQRGLSNVV-FTGMLNDEDKYILFQLCRGVVFPSHLRSEAFGITLL 185
Query: 283 EAMASEVPVIGTSVGGIPEIIGD---AGIIVPPRDSKALANAINAILSNQKTAKRLGKLG 339
E P+I +G I +G ++PP DS+AL A+N + +N++T+ R G+
Sbjct: 186 EGARFARPLISCEIGTGTSFINQDKVSGCVIPPNDSQALVEAMNELWNNEETSNRYGENS 245
Query: 340 RKRVERLYSWDVVAERTERLY 360
R+R E +++ D + + LY
Sbjct: 246 RRRFEEMFTADHMIDAYVNLY 266
>dbj|BAA28303.1| (AB009326) mannosyl transferase [Escherichia coli]
Length = 274
Score = 92.1 bits (225), Expect = 9e-18
Identities = 63/214 (29%), Positives = 112/214 (51%), Gaps = 14/214 (6%)
Query: 159 ASVSFLRKFTNAPIVEIPNGV---NIERFNGRGREW----GTRNILYVGRLEPRKGVNYL 211
AS L+K+ + +V IP G+ +++ R W G + L+VG KG++ L
Sbjct: 55 ASSQTLKKYLDKTVV-IPFGLEQQDVQHDPQRVAHWRETVGDKFFLFVGTFRYYKGLHIL 113
Query: 212 ISAMKFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLP 271
+ A + + +VG G + ++ +A++ G+ + V F G ++ E+ +L++ V P
Sbjct: 114 MDAAERSRLPVVVVGGGPLESEVRREAQQRGLSN-VMFTGMLNDEDKYILFQLCRGVVFP 172
Query: 272 S--LSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGD---AGIIVPPRDSKALANAINAIL 326
S SEAFGI LLE P+I +G I +G ++PP DS+AL A+N +
Sbjct: 173 SHLRSEAFGITLLEGARFARPLISCEIGTGTSFINQDKVSGCVIPPNDSQALVEAMNELW 232
Query: 327 SNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY 360
+N++T+ R G+ R+R E +++ D + + LY
Sbjct: 233 NNEETSNRYGENSRRRFEEMFTADHMIDAYVNLY 266
>emb|CAB57789.1| (AJ250131) HepD protein [Anabaena PCC7120]
Length = 391
Score = 92.1 bits (225), Expect = 9e-18
Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 154 IGVSKASVSFLRKFTNAP---IVEIPNGVNIERFNG--------RGREWG-TRNILYVGR 201
I +SKA + L + P I IP GVNI++F + W +R IL+ R
Sbjct: 161 IVLSKAFGNILHQQYQIPWHKIHIIPGGVNIDKFQPNLSRQQARQQLNWPESRPILFTSR 220
Query: 202 -LEPRKGVNYLISAMKFVEGKL-----TIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQ 255
L R GV+ L+ A+ ++ KL I G G ++ L+ QA++LG+E+ V+FLGF+
Sbjct: 221 RLVHRVGVDKLLQALAIIKPKLPDIWLAIAGRGHLQTTLEKQAQELGLENNVKFLGFLPD 280
Query: 256 EELILLYKKSEVFVLPSLS-EAFGIVLLEAMASEVPVIGTSVGGIPEIIG--DAGIIVPP 312
E+L + Y+ + + V+PS S E FG+ + E++A PV+ T +GG+PEI+ +I
Sbjct: 281 EQLPIAYQAANLTVMPSQSFEGFGLAITESLACGTPVLCTPIGGMPEILTPFSPQLITAS 340
Query: 313 RDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERL 359
++ A+A I IL Q K + R+ + W +A++ ++
Sbjct: 341 PEATAIAEKIAQILLEQ-IPKPSREECRQYAVTNFDWQKIAQQVRQV 386
>dbj|BAA28297.1| (AB009323) mannosyl transferase [Escherichia coli]
>gi|3142175|dbj|BAA28299.1| (AB009324) mannosyl
transferase [Escherichia coli]
>gi|3142178|dbj|BAA28301.1| (AB009325) mannosyl
transferase [Escherichia coli]
Length = 274
Score = 91.3 bits (223), Expect = 2e-17
Identities = 63/214 (29%), Positives = 112/214 (51%), Gaps = 14/214 (6%)
Query: 159 ASVSFLRKFTNAPIVEIPNGV---NIERFNGRGREW----GTRNILYVGRLEPRKGVNYL 211
AS L+K+ + +V IP G+ +++ R W G + L+VG KG++ L
Sbjct: 55 ASSQTLKKYLDKTVV-IPFGLEQQDVQHDPQRVAYWRETVGDKFFLFVGTFRYYKGLHIL 113
Query: 212 ISAMKFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLP 271
+ A + + +VG G + ++ +A++ G+ + V F G ++ E+ +L++ V P
Sbjct: 114 MDAAERSRLPVVVVGGGPLESEVRREAQQRGLSN-VMFTGMLNDEDKYILFQLCRGVVFP 172
Query: 272 S--LSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGD---AGIIVPPRDSKALANAINAIL 326
S SEAFGI LLE P+I +G I +G ++PP DS+AL A+N +
Sbjct: 173 SHLRSEAFGITLLEGARFARPLISCEIGTGTSFINQDKVSGCVIPPNDSQALVEAMNELW 232
Query: 327 SNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY 360
+N++T+ R G+ R+R E +++ D + + LY
Sbjct: 233 NNEETSNRYGENSRRRFEEMFTADHMIDAYVNLY 266
>pir||T45962 hypothetical protein F7J8.200 - Arabidopsis thaliana
>gi|6759445|emb|CAB69850.1| (AL137189) putative protein
[Arabidopsis thaliana]
Length = 470
Score = 90.9 bits (222), Expect = 2e-17
Identities = 93/351 (26%), Positives = 152/351 (42%), Gaps = 55/351 (15%)
Query: 14 FPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQK-YGIDLI-----KVPGLI 67
F + G N +LR+MG EV +VT EG ++ YG +I P
Sbjct: 115 FAYVSGYKNRFQNFIRYLREMGDEVIVVTT-----HEGVPEEFYGARVIGSRSFPCPYYQ 169
Query: 68 KDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFE 127
K ++L++ + + + + D++HA S P GAL + SV
Sbjct: 170 KVPLSLALSPRIISEIARFKP--DIIHA----------SSPGVMVFGALAIAKMLSVPI- 216
Query: 128 NFSILNGFSKMSYSYFKMYLGQVKVG---IGVSKASVSFLRKFTNAPIVEIPNGVNIERF 184
+++ + + + + +G I + + LR + GV+ E F
Sbjct: 217 ---VMSYHTHVPVAADLTLVPSAAIGKDLIAAGATAANQLRLWNK--------GVDSESF 265
Query: 185 NGRGREWGTRNILYVGRLEPRKGVNYLISAM-KFVEGKLTIVGDGSMRKVLKMQAKKLGV 243
N R R R R+ K + L S M K E ++ +GDG ++ L+ KL
Sbjct: 266 NPRFRSQEMR------RIGVEKSLELLKSVMDKLPEARIAFIGDGPYKEDLE----KLFT 315
Query: 244 EDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII 303
F G + +EL Y +VFV+PS SE G+V+LEAM+S +PV+ GGIP+II
Sbjct: 316 GMPAVFTGTLQGDELSQAYASGDVFVMPSESETLGLVVLEAMSSGLPVVAARAGGIPDII 375
Query: 304 -----GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSW 349
G G + P D + + +L +++T + +GK R+ E+ Y W
Sbjct: 376 PEDQEGKTGFLFNPGDVEDCVTKLRTLLHDRETREIIGKAAREETEK-YDW 425
>pir||S22619 hypothetical protein 17.9 - Salmonella choleraesuis
>gi|47011|emb|CAA43913.1| (X61917) second mannosyl
transferase [Salmonella enterica]
Length = 336
Score = 90.5 bits (221), Expect = 3e-17
Identities = 59/187 (31%), Positives = 101/187 (53%), Gaps = 5/187 (2%)
Query: 172 IVEIPNGVNIERFNG--RGREWGTRNILYVGRLEPRKGVNYLISAMKF--VEGKLTIVGD 227
IV + NGV+ FN + G + +L VG + K +ISA ++ + +V
Sbjct: 138 IVTVYNGVS-SLFNADVKPLNLGYKYLLCVGNRKTHKNEKCVISAFAKADIDPSIKLVFT 196
Query: 228 GSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMAS 287
G+ L+ + G+ ++V+F GF+S+++L LYK S V PSL E FG+ ++E MA
Sbjct: 197 GNPCNDLEKLIIQHGLSERVKFFGFVSEKDLPSLYKGSLGLVFPSLYEGFGLPVVEGMAC 256
Query: 288 EVPVIGTSVGGIPEIIGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLY 347
+PV+ + +PE+ GDA I+V P A+ I+ ++++ + K L + G R +R
Sbjct: 257 GIPVLTSLTSSLPEVAGDAAILVDPLSEDAITKGISRLINDSELRKHLIQKGLLRAKRFN 316
Query: 348 SWDVVAE 354
+VV+E
Sbjct: 317 WQNVVSE 323
>dbj|BAA23228.1| (AB000126) mannosyl transferase [Klebsiella pneumoniae]
>gi|3142187|dbj|BAA28307.1| (AB009328) mannosyl
transferase [Klebsiella pneumoniae]
>gi|3142190|dbj|BAA28309.1| (AB009329) mannosyl
transferase [Klebsiella pneumoniae]
>gi|3142193|dbj|BAA28311.1| (AB009330) mannosyl
transferase [Klebsiella pneumoniae]
>gi|3142196|dbj|BAA28313.1| (AB009331) mannosyl
transferase [Klebsiella pneumoniae]
>gi|3142199|dbj|BAA28315.1| (AB009332) mannosyl
transferase [Klebsiella pneumoniae]
>gi|3142202|dbj|BAA28317.1| (AB009333) mannosyl
transferase [Klebsiella pneumoniae]
>gi|3142205|dbj|BAA28319.1| (AB009334) mannosyl
transferase [Klebsiella pneumoniae]
Length = 274
Score = 90.5 bits (221), Expect = 3e-17
Identities = 74/261 (28%), Positives = 126/261 (47%), Gaps = 21/261 (8%)
Query: 115 ALTLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSK---ASVSFLRKFTNAP 171
A T+VT HS + ++ + + + +L V + S AS L+K+ +
Sbjct: 12 ARTVVTYHSDIVKQKRLMKLYQPLQ----ERFLASVDCIVASSPNYVASSQTLKKYQDKT 67
Query: 172 IVEIPNGV---NIERFNGRGREW----GTRNILYVGRLEPRKGVNYLISAMKFVEGKLTI 224
+V IP G+ +++ R W G L+VG KG++ L+ A + + I
Sbjct: 68 VV-IPFGLEQHDVQHDPQRVAHWRETVGDNFFLFVGAFRYYKGLHILLDAAERSRLPVVI 126
Query: 225 VGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPS--LSEAFGIVLL 282
VG G + ++ +A++ G+ + V F G ++ E+ +L++ V PS SEAFGI LL
Sbjct: 127 VGGGPLEAEVRREAQQRGLSNVV-FTGMLNDEDKYILFQLCRGVVFPSHLRSEAFGITLL 185
Query: 283 EAMASEVPVIGTSVGGIPEIIGDA---GIIVPPRDSKALANAINAILSNQKTAKRLGKLG 339
E P+I +G I G ++PP DS+AL A+N + N +TA R G+
Sbjct: 186 EGARFARPLISCEIGTGTSFINQDKVNGCVIPPNDSQALVEAMNELWHNDETASRYGENS 245
Query: 340 RKRVERLYSWDVVAERTERLY 360
R+R E +++ D + + LY
Sbjct: 246 RRRFEEMFTADHMIDAYVNLY 266
>pir||S74765 mannosyltransferase B - Synechocystis sp. (strain PCC 6803)
>gi|1651990|dbj|BAA16916.1| (D90901) mannosyltransferase
B [Synechocystis sp.]
Length = 367
Score = 90.1 bits (220), Expect = 4e-17
Identities = 61/175 (34%), Positives = 89/175 (50%), Gaps = 9/175 (5%)
Query: 197 LYVGRLEPRKGVNYLISAMKFVEGK-------LTIVGDGSMRKVLKMQAKKLGVEDKVEF 249
LYVG K + L+ A + V K L +VG K + + LG+ V
Sbjct: 195 LYVGARGTYKNFDQLLLAFQKVTAKPKYADLLLCVVGS-PFENQEKERLEFLGLSKNVVH 253
Query: 250 LGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGII 309
G + +L LY +S FV PSL E FGI LEAMA VIG++V IPE++GDAG++
Sbjct: 254 YGRATDGQLAKLYNQSIAFVYPSLYEGFGIPPLEAMACGTAVIGSNVSSIPEVVGDAGLL 313
Query: 310 VPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGEL 364
P+ L + + +L N L + G+K+ ++ +SWD A++T YR L
Sbjct: 314 FDPKSMDQLVDQLLYVLENPIKRDSLIQKGKKQCKK-FSWDKTAQQTVETYRSLL 367
>sp|P42982|YPJH_BACSU HYPOTHETICAL 42.0 KDA PROTEIN IN DAPB-PAPS INTERGENIC REGION
>gi|7475602|pir||G69937 lipopolysaccharide
biosynthesis-related pr homolog ypjH - Bacillus subtilis
>gi|1146237|gb|AAB38445.1| (L47709) 21.4% of identity to
trans-acting transcription factor of Sacharomyces
cerevisiae; 25% of identity to sucrose synthase of Zea
mays; putative [Bacillus subtilis]
>gi|2634664|emb|CAB14162.1| (Z99115) alternate gene
name: jojH~similar to lipopolysaccharide
biosynthesis-related protein [Bacillus subtilis]
Length = 377
Score = 90.1 bits (220), Expect = 4e-17
Identities = 94/386 (24%), Positives = 170/386 (43%), Gaps = 42/386 (10%)
Query: 1 MESLKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALT---NGKEGELQKYG 57
M LKI + +P +GG I L L + GHE+ +T+++ N + +
Sbjct: 1 MRKLKIGITC---YPSVGGSGIIATELGKQLAEKGHEIHFITSSIPFRLNTYHPNIHFHE 57
Query: 58 IDLIKVPGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQ----HAFTPLSLKSIPAGNKV 113
+++ + +L++ +K + V + D++HA HA K + N +
Sbjct: 58 VEVNQYAVFKYPPYDLTLASKIAE--VAERENLDIIHAHYALPHAVCAYLAKQMLKRN-I 114
Query: 114 GALTLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKA-------------S 160
G +T T H + + G+ + + VS A
Sbjct: 115 GIVT--TLHGTDIT----VLGYDPSLKDLIRFAIESSDRVTAVSSALAAETYDLIKPEKK 168
Query: 161 VSFLRKFTNAPIVEIPNGVNIERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFVEG 220
+ + F + + N I+ +G + + +++V K V +I + + G
Sbjct: 169 IETIYNFIDERVYLKKNTAAIKEKHGILPD--EKVVIHVSNFRKVKRVQDVIRVFRNIAG 226
Query: 221 K----LTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEA 276
K L +VGDG + +K G+ED+V LG +Q+ + LY S++ +L S E+
Sbjct: 227 KTKAKLLLVGDGPEKSTACELIRKYGLEDQVLMLG--NQDRVEDLYSISDLKLLLSEKES 284
Query: 277 FGIVLLEAMASEVPVIGTSVGGIPEIIGD--AGIIVPPRDSKALANAINAILSNQKTAKR 334
FG+VLLEAMA VP IGT++GGIPE+I + +G +V D A +IL +++ + R
Sbjct: 285 FGLVLLEAMACGVPCIGTNIGGIPEVIKNNVSGFLVDVGDVTAATARAMSILEDEQLSNR 344
Query: 335 LGKLGRKRVERLYSWDVVAERTERLY 360
K + +E +S + + E++Y
Sbjct: 345 FTKAAIEMLENEFSSKKIVSQYEQIY 370
>gb|AAK42865.1| Glycosyltransferase, putative [Sulfolobus solfataricus]
Length = 437
Score = 89.7 bits (219), Expect = 5e-17
Identities = 57/165 (34%), Positives = 86/165 (51%), Gaps = 19/165 (11%)
Query: 196 ILYVGRLEPRKGVNYLISAMKFVEGKLTIVGDGSMRKV-------------LKMQAKKLG 242
IL V R++P K + ISA+K V+ KL + GDGS LK A+ LG
Sbjct: 254 ILVVARMDPMKSQDLAISAIKNVDAKLVLAGDGSFTSKTLGHDKGSMWVSRLKELARSLG 313
Query: 243 VEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEI 302
VE+KV F G++ EEL LY+++ V +LPS E FG+ + E P + +S GI E+
Sbjct: 314 VENKVVFTGYVPDEELFALYQRANVVLLPSRIEGFGLAVCEGWVYGKPAVVSSGAGISEL 373
Query: 303 I--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVER 345
I G G + + LA + L ++K +G LG++ V++
Sbjct: 374 IIEGGNGFVFKSGNIDELAEKLKLALKDEK----VGSLGKETVKK 414
>gb|AAG18689.1| (AE004974) LPS biosynthesis; RfbU1 [Halobacterium sp. NRC-1]
Length = 403
Score = 88.9 bits (217), Expect = 8e-17
Identities = 58/172 (33%), Positives = 89/172 (51%), Gaps = 9/172 (5%)
Query: 195 NILYVGRLEPRKGVNYLISAMKFVEGK-----LTIVGDGSMRKVLKMQAKKLGVEDKVEF 249
NILYVG LE KGV+ L+ ++ + + LT+VG G ++ ++ Q+ VED V+F
Sbjct: 230 NILYVGSLERHKGVDKLVPIIQGLRQREHDVELTVVGTGGLQSKMEEQSVNRNVEDYVDF 289
Query: 250 LGFISQEELILLYKKSEVFVLPSL-SEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGI 308
GF+S E+L +Y +VF+ P + E V +EA+A+ P++ G I IIGD G+
Sbjct: 290 AGFVSNEQLPSVYASHDVFIHPGIWEEPLARVYIEALATGTPIVTREYGSIETIIGDGGV 349
Query: 309 IVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY 360
+ I +N+ A L + GR VER Y + + E LY
Sbjct: 350 TTDGSIDGFVQTIAELINANKLPA--LSEGGRSHVER-YDRSQIVSQVEDLY 398
>emb|CAC11484.1| (AL445064) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 388
Score = 88.9 bits (217), Expect = 8e-17
Identities = 78/288 (27%), Positives = 128/288 (44%), Gaps = 29/288 (10%)
Query: 89 GFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFENFSILNGFSKMSYSYFKMYLG 148
G DVVH H + S + K G +VT HS EF+ + N ++
Sbjct: 111 GVDVVHC-HDWITFSA-GLRIREKYGIPLVVTFHSTEFDRSAFFNPQERIM--------- 159
Query: 149 QVKVGIGVSKASVSFLRKFTNAPIVE-----------IPNGVNIERFNGRGREWGTRNIL 197
++ + + + T IVE I NGV+ + E R++L
Sbjct: 160 SIERDGARNADRIICVSNLTRRMIVENYGADDTKIRTIYNGVDPYPYLSHPDEKRERDVL 219
Query: 198 YVGRLEPRKGVNYLISAMKFV-----EGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGF 252
Y GR+ +KG + + K V K T+ G G + +K A + G + ++F GF
Sbjct: 220 YFGRVTSQKGPKFFMEVAKKVLELDGSVKFTVAGTGELLPEMKRYAFENGFLNHMDFTGF 279
Query: 253 ISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGIIVPP 312
+S I YK+S VF++P++SE FG+ +LEAM S PVI + G+ E + +
Sbjct: 280 VSFRRAISYYKRSSVFIIPAVSEPFGMTVLEAMISGTPVILSKTTGVGEALNHV-LSADF 338
Query: 313 RDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY 360
D+ +A +IL+++ K L + G+ R ++W A T +Y
Sbjct: 339 WDTDKMALYTISILNHRGLLKTLSEYGKMEAMR-FTWRRAALSTMEVY 385
>pir||S51264 probable galactosyltransferase trsE - Yersinia enterocolitica
>gi|633696|emb|CAA87702.1| (Z47767) WbcN [Yersinia
enterocolitica]
Length = 344
Score = 88.5 bits (216), Expect = 1e-16
Identities = 92/347 (26%), Positives = 156/347 (44%), Gaps = 47/347 (13%)
Query: 35 GHEVSIVT---NALTNGKEGELQKYGIDLIKVP-GLIKDGINLSMIAKSSNSLVEYLKGF 90
GH V I++ L +G +Q + L K P L K + I K
Sbjct: 5 GHNVMIISLTGETLVRPNDG-IQLNELKLDKAPFSLFKGLFEVKKIIKKFKP-------- 55
Query: 91 DVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQV 150
D+VH+ L + + K+ AL +++ E + +L +Y Y
Sbjct: 56 DIVHSHMFHANLFARILRVFTKIPALICTAHNTNEGSSLRML------AYKYTDKL---A 106
Query: 151 KVGIGVSKASV-SFLRKFTNAP--IVEIPNGVNIERFNG-------RGREWGTRN----I 196
+ VS+ +V SF+ K ++ ++ + NG++ +F+ + E G N I
Sbjct: 107 SLSTNVSQDAVDSFIHKGASSTGRMIAVSNGIDASQFDFSMDERKVKRSELGIFNDTPII 166
Query: 197 LYVGRLEPRKGVNYLISAMKFVEG--------KLTIVGDGSMRKVLKMQAKKLGVEDKVE 248
L VGRL K L++A + +L IVG G + LK +K+ G++ V
Sbjct: 167 LSVGRLTEAKDYPNLLTAFSLLIKDNSLQSFPQLFIVGTGHLDGYLKNMSKEFGIDKYVT 226
Query: 249 FLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGI 308
G +++++ L +++FVL S E F +V+ EAMA + ++ T GGI E +GD G
Sbjct: 227 LFG--QRDDILQLMCAADIFVLSSEWEGFPLVITEAMACKKIIVATDAGGITEALGDCGS 284
Query: 309 IVPPRDSKALANAINAILSNQKTAKR-LGKLGRKRVERLYSWDVVAE 354
IVP +D +L+ AIN ++ K LG R+R+ + S + + E
Sbjct: 285 IVPIKDPNSLSQAINKMIKLSDNEKEILGNKARERIIQTNSIEKIIE 331
>gb|AAF04385.1|AF189151_8 (AF189151) WbdC; mannosyl transferase C [Klebsiella pneumoniae]
Length = 274
Score = 88.2 bits (215), Expect = 1e-16
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 21/261 (8%)
Query: 115 ALTLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSK---ASVSFLRKFTNAP 171
A T+VT HS + ++ + + + +L V + S AS L+K+ +
Sbjct: 12 ARTVVTYHSDIVKQKRLMKLYQPLQ----ERFLASVDCIVASSPNYVASSQTLKKYQDKT 67
Query: 172 IVEIPNGV---NIERFNGRGREW----GTRNILYVGRLEPRKGVNYLISAMKFVEGKLTI 224
+V IP G+ +++ R W G L+VG KG++ L+ A + + I
Sbjct: 68 VV-IPFGLEQHDVQHDPQRVAHWRETVGDNFFLFVGAFRYYKGLHILLDAAERNRLPVVI 126
Query: 225 VGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPS--LSEAFGIVLL 282
VG G + ++ +A + G+ + V F G ++ E+ +L++ V PS SEAFGI LL
Sbjct: 127 VGGGPLDAEVRREAPQRGLSNVV-FTGMLNYEDKYILFQLCRGVVFPSHLRSEAFGITLL 185
Query: 283 EAMASEVPVIGTSVGGIPEIIGDA---GIIVPPRDSKALANAINAILSNQKTAKRLGKLG 339
E P+I +G I G ++PP DS+AL A+N + N +TA R G+
Sbjct: 186 EGARFARPLISCEIGTGTSFINQDKVNGCVIPPNDSQALVEAMNELWHNDETASRYGENS 245
Query: 340 RKRVERLYSWDVVAERTERLY 360
R+R E +++ D + + LY
Sbjct: 246 RRRFEEMFTADHMIDAYVNLY 266
>pir||S76544 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001656|dbj|BAA10390.1| (D64002) mannosyl
transferase [Synechocystis sp.]
Length = 365
Score = 88.2 bits (215), Expect = 1e-16
Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 16/233 (6%)
Query: 142 YFKMYLGQVKVGIGVSKASVSFLRKFTNAP---IVEIPNGVNIERFNGRGREWGTRN--- 195
Y + LGQ + + S+A+ + + P I I G + E F R
Sbjct: 129 YLPLVLGQAEHILCNSQATADDVVDYFQIPASKITAIALGYDREHFQPGQDNLAPRKKPY 188
Query: 196 ILYVGRLEPRKGVNYLISAM-KFVEG------KLTIVGDGSMRKVLKMQA--KKLGVEDK 246
L+VGR +P K V LI A +FV+ +L + G R K+ A +LGV +
Sbjct: 189 FLFVGRHDPHKNVGRLIQAFARFVQNTNSQDIELILAGPTDRRYTPKLMALATELGVGTE 248
Query: 247 VEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDA 306
V L ++S ++L LY+++ V PSL E FG +LEAMA VI +SV +PE+ GDA
Sbjct: 249 VHCLDYVSYDQLRQLYRQAIALVFPSLWEGFGFPVLEAMACGTAVITSSVSSLPEVGGDA 308
Query: 307 GIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERL 359
++V P K + A+ + +++ ++L + R R +SW+ T +
Sbjct: 309 VLLVDPYSIKEIYQAMEQVWKDRRLCQQLQQQSLARA-REFSWEKTGHLTREV 360
>pir||F69142 probable hexosyltransferase (EC 2.4.1.-) MTH332 [similarity] -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621388|gb|AAB84838.1| (AE000818) LPS biosynthesis
RfbU related protein [Methanobacterium
thermoautotrophicum]
Length = 400
Score = 88.2 bits (215), Expect = 1e-16
Identities = 104/379 (27%), Positives = 171/379 (44%), Gaps = 31/379 (8%)
Query: 4 LKIALVSDWYFPKI-GGVAIHVHNLAIHLRKMGHEVS--IVTNALTNGKEGELQKYGIDL 60
++IA V D +P I GGV V+ + L + GH+V V L + E ++ GI
Sbjct: 26 MRIAFVYDGAYPWIKGGVEKRVYEIGRRLAERGHDVHWYCVGWWLPDNGERTIEIDGIKY 85
Query: 61 IKVPGLIKDGIN----LSMIAKSSNSLVEYL--KGFDVVHAQHA--FTPLSLKSIPAGNK 112
V ++ +N + K S SL L + FD++ Q F+ S K NK
Sbjct: 86 HAVCEPLEIYVNGRRSIKAAIKFSISLTRPLLREKFDIIDCQQFPYFSCFSAKLASLVNK 145
Query: 113 VGALTLVTNHSVEF--ENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNA 170
+ V + ++ E + F K+ ++ I +S ++L F
Sbjct: 146 SSLIITVLEYWGDYWYEYLGKVGIFGKIVE---RLTFNLTSDYITISSHVRNYL-SFCKD 201
Query: 171 PIVEIPNGVNIERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFVEG---KLT--IV 225
I +P+GV + N+++VGRL K V+ L+ A+ + KLT I+
Sbjct: 202 SIHIVPDGVPFNKIRKIKPSSEKANLIFVGRLIKHKNVDVLLKALHLLRDDGFKLTCIII 261
Query: 226 GDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKS-EVFVLPSLSEAFGIVLLEA 284
GDG ++ L + LG+E +V+F+G + ++ + Y KS +FV PS E G+V LEA
Sbjct: 262 GDGPEKENLMKITRDLGLEAQVKFMGRVPSDDEVYKYMKSCNIFVFPSSREGAGLVTLEA 321
Query: 285 MASEVPVIGTS--VGGIPEIIGDAGIIVPPRDSKALANAINAILS-NQKTAKRLGKLGRK 341
A+ +PVI T+ + E+I ++ D L I I++ ++K K K
Sbjct: 322 NAAGLPVITTNHKLNASRELINGKNGVLFNLDPHDLKEKIILIMNEHEKLRKDCIKFAES 381
Query: 342 RVERLYSWDVVAERTERLY 360
YSWD +A+ TE +Y
Sbjct: 382 -----YSWDKIADLTENVY 395
>pir||S76126 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001478|dbj|BAA10104.1| (D63999) hypothetical
protein [Synechocystis sp.]
Length = 409
Score = 87.8 bits (214), Expect = 2e-16
Identities = 88/378 (23%), Positives = 164/378 (43%), Gaps = 31/378 (8%)
Query: 3 SLKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKY-GIDLI 61
++++AL ++ + PKI G+ + + +L++ GH+V + EG L++Y G +
Sbjct: 31 AMRVALFTETFLPKIDGIVTRLKHTVENLQRQGHQVLVFC------PEGGLKEYKGAKIH 84
Query: 62 KVPGLIKDGINLSMIAKSSNSLVEYLKGF--DVVHAQHAFTPLSLKSIPAGNKVGALTLV 119
V G+ +A S + + L F D++H + L L I + +
Sbjct: 85 GVKGMPLPLYPELKLAFPSPQIKQALLKFQPDLIHVVNPAV-LGLGGIYYAKNLHIPLVA 143
Query: 120 TNHS--VEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPN 177
+ H+ ++ L + + K+ Q ++ + S A V L +
Sbjct: 144 SYHTHLPQYLQHYGLGALEGVLWELLKLAHNQAELNLCTSSAMVQELVNHGIERVDLWQR 203
Query: 178 GVNIERFNGRGREWGTRN-----------ILYVGRLEPRKGVNYLISAMKFV-EGKLTIV 225
GV+ E F + R LYVGR+ K ++ + ++ + + +L IV
Sbjct: 204 GVDTELFQPHLKSAQMRQKLSQGHPDDPLFLYVGRVSAEKQIDEIKPVLEAIPQARLAIV 263
Query: 226 GDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAM 285
GDG RK ++A G F G++ EL + ++ F+ PS +E G+VLLEAM
Sbjct: 264 GDGPNRK--NLEAHFAGTN--TYFAGYMQGLELAAAFASADAFIFPSRTETLGLVLLEAM 319
Query: 286 ASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRV 343
A+ PV+ + GGI +I+ G+ G + P + + A ++S + L + R+
Sbjct: 320 AAGCPVVAAASGGILDIVTDGENGYLFDPAVAGGVVQATQRLMSAPGDRELLRQNARQEA 379
Query: 344 ERLYSWDVVAERTERLYR 361
ER + W + Y+
Sbjct: 380 ER-WGWPAATRQLVDYYQ 396
>pir||S75523 mannosyltransferase B - Synechocystis sp. (strain PCC 6803)
>gi|1653168|dbj|BAA18084.1| (D90911) Mannosyltransferase
B [Synechocystis sp.]
Length = 399
Score = 87.4 bits (213), Expect = 2e-16
Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 8/172 (4%)
Query: 197 LYVGRLEPRKGVNYLISAMKFVEG------KLTIVGD-GSMRKVLKMQAKKLGVEDKVEF 249
L+V LEPRK V LI A + +L ++G G + + +D++
Sbjct: 225 LFVSTLEPRKNVVGLIEAFNLFKQVTKAHHQLVLIGQLGWKYEPILTAIANSAYQDQIHR 284
Query: 250 LGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGII 309
L ++ + L Y+++ FV PS E FG+ ++EAM +P+I G +PE++GD+G++
Sbjct: 285 LAYVPNQWLGEFYQRATAFVYPSFYEGFGLPVVEAMNFGLPIITAGAGSLPEVMGDSGVL 344
Query: 310 VPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYR 361
V P+D++ALA A+ I+S+ L + R + +SW+ A +T +Y+
Sbjct: 345 VDPQDTQALALALEKIVSDTDWRDHLRQKSLTR-SKDFSWENTARKTLEVYQ 395
>pir||D69143 LPS biosynthesis RfbU related protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621394|gb|AAB84844.1| (AE000818) LPS biosynthesis
RfbU related protein [Methanobacterium
thermoautotrophicum]
Length = 350
Score = 87.4 bits (213), Expect = 2e-16
Identities = 69/239 (28%), Positives = 118/239 (48%), Gaps = 16/239 (6%)
Query: 138 MSYSYFKMYL--GQVKVGIGVSKASVSFLRK---FTNAPIVEIPNGVNIERFNGRGREWG 192
+ Y+ K +L G V V I S+ ++ LR+ F ++++PN + + + + +
Sbjct: 116 LGYAKIKKFLLGGAVDVVISPSQFLINKLRENNIFNETEMIKLPNPIELGETSPSSKPYH 175
Query: 193 TR-NILYVGRLEPRKGVNYLISAMKFVEGK---LTIVGDGSMRKVLKMQAKKLGVEDKVE 248
+ +LYVG L KG++ LI A+K ++ + + I G G K +K L V +
Sbjct: 176 KKLMLLYVGELSKHKGLHILIEALKRIDDENICVDIYGRGVHEDYFKSISKDLNVFFRGY 235
Query: 249 FLGFISQEELILLYKKSEVFVLPSLS-EAFGIVLLEAMASEVPVIGTSVGGIPEIIGDA- 306
GF EEL Y+ + V V+PS+ E FG+++LE+ + PVI + +GGIPE++ D
Sbjct: 236 ANGF---EELKKAYQNANVTVVPSICYEVFGMIILESFMNSTPVIASRIGGIPEVVRDGY 292
Query: 307 -GIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGEL 364
G + P L + I + K L + K + YS + ++ E +YRG L
Sbjct: 293 NGFLFKPGSVNGLRRILERISEHPSILKELERNAYKSSQG-YSIEDHVKKLEEIYRGLL 350
>gb|AAA92877.1| (L38424) unknown [Bacillus subtilis]
Length = 357
Score = 87.0 bits (212), Expect = 3e-16
Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 8/171 (4%)
Query: 196 ILYVGRLEPRKGVNYLISAMKFVEGK----LTIVGDGSMRKVLKMQAKKLGVEDKVEFLG 251
+++V K V +I + + GK L +VGDG + +K G+ED+V LG
Sbjct: 182 VIHVSNFRKVKRVQDVIRVFRNIAGKTKAKLLLVGDGPEKSTACELIRKYGLEDQVLMLG 241
Query: 252 FISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGD--AGII 309
+Q+ + LY S++ +L S E+FG+VLLEAMA VP IGT++GGIPE+I + +G +
Sbjct: 242 --NQDRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCIGTNIGGIPEVIKNNVSGFL 299
Query: 310 VPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY 360
V D A +IL +++ + R K + +E +S + + E++Y
Sbjct: 300 VDVGDVTAATARAMSILEDEQLSNRFTKAAIEMLENEFSSKKIVSQYEQIY 350
>pir||F70441 capsular polysaccharide biosynthsis protein - Aquifex aeolicus
>gi|2983976|gb|AAC07522.1| (AE000749) capsular
polysaccharide biosynthsis protein [Aquifex aeolicus]
Length = 316
Score = 87.0 bits (212), Expect = 3e-16
Identities = 51/156 (32%), Positives = 90/156 (57%), Gaps = 9/156 (5%)
Query: 196 ILYVGRLEPRKGVNYLISAMKFVEGK-----LTIVGDGSMRKVLKMQAKKLGVEDKVEFL 250
I+ VGRLE +KG Y++ A K + K L I+G+GS + ++ ++LG+++KV L
Sbjct: 145 IIAVGRLEDQKGYPYMLRAFKLISEKFKDLHLLIIGEGSKKNQVEKLIEELGLKNKVHLL 204
Query: 251 GFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGD--AGI 308
G+ Q K+++ +++ S+ E FG+VL+EAMA +PVI + + E++ D AG+
Sbjct: 205 GY--QLNPYKYIKRAKAYLMTSIYEGFGLVLVEAMALGIPVIAFDIPAVREVLNDGKAGV 262
Query: 309 IVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVE 344
+VP D A A + +L+++ + K G R +
Sbjct: 263 LVPFGDINAFAKGLEKLLTDRNLREYYIKNGLIRAK 298
>gb|AAC98618.1| (AF047478) mannosyltransferase; WbkA [Brucella melitensis]
Length = 376
Score = 87.0 bits (212), Expect = 3e-16
Identities = 51/171 (29%), Positives = 91/171 (52%), Gaps = 8/171 (4%)
Query: 197 LYVGRLEPRKGVNYLISAM----KFVEGKLTIV---GDGSMRKVLKMQAKKLGVEDKVEF 249
L++G LEPRK + L+ A + V +V G G + +LG+ +
Sbjct: 196 LFIGTLEPRKNLIRLLEAYANLPECVRNNFLLVVAGGKGWNLGDIGKTINRLGIAEYTRL 255
Query: 250 LGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGII 309
G+++ +L LY+ + ++PSL E FG+ ++EA A VPVI ++ +PE+ GDA I+
Sbjct: 256 TGYVTDSDLNDLYRNARTLLMPSLYEGFGLPIIEAQAYGVPVITSNCSSMPEVAGDAAIL 315
Query: 310 VPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY 360
V P + ++NA+ I ++ K +R L + +ER ++W E+ E ++
Sbjct: 316 VDPLNVAEISNALYRIATDNKLWQRKSLLALQNIER-FNWHNSIEKLESVF 365
>pir||A82964 glycosyltransferase WbpZ PA5447 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9951778|gb|AAG08832.1|AE004958_2
(AE004958) glycosyltransferase WbpZ [Pseudomonas
aeruginosa]
Length = 381
Score = 87.0 bits (212), Expect = 3e-16
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 6/175 (3%)
Query: 192 GTRNILYVGRLEPRKGVNYLISAMKFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLG 251
G R L+VG + KG++ L+ A++ + + IVG G ++ L QA LG+ + V FLG
Sbjct: 192 GPRFFLFVGVMRYYKGLHILLDALQGTDYPVVIVGAGPLQAELYAQAAALGLRN-VHFLG 250
Query: 252 FISQEELILLYKKSEVFVLPS--LSEAFGIVLLEAMASEVPVIGTSVG---GIPEIIGDA 306
+ E+ + L + S V PS SEAFGI LLE P+I + +G I G+
Sbjct: 251 RVDDEDKVALLQLSYAMVFPSHLRSEAFGISLLEGAMYGKPMISSEIGTGTSYINIHGET 310
Query: 307 GIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYR 361
G++VPP A A+ + + + A+ +G+ R +L++ + + R LYR
Sbjct: 311 GLVVPPSQPAAFRQAMRWLWEHPQQAEEMGRNAEARYRQLFTAEEMGRRWSELYR 365
>pir||S77338 LPS glycosyltransferase icsA - Synechocystis sp. (strain PCC 6803)
>gi|1652520|dbj|BAA17441.1| (D90906) LPS
glycosyltransferase IcsA [Synechocystis sp.]
Length = 379
Score = 86.6 bits (211), Expect = 4e-16
Identities = 64/224 (28%), Positives = 117/224 (51%), Gaps = 14/224 (6%)
Query: 144 KMYLGQVKVGIGVSKASVSFLRKFTNAP-IVEIPNGVNIERFNGRGREWGTR--NILYVG 200
++ G+ I VS+ S+L+++ + + +PNG+N RF G + T + +V
Sbjct: 147 EIVFGKATALIAVSQEVKSYLQQWVSGDRLFVMPNGINPARFAGLSKPSQTELFTVGFVS 206
Query: 201 RLEPRKGVNYLISAMKFV-----EGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQ 255
L+P G++YLI A + E +L IVGDG R+VL+ + + +V++ G +
Sbjct: 207 SLKPWHGLDYLIEAFAQLRRTVPEARLLIVGDGPQRQVLERAISQRNLTTQVQWTGTVPP 266
Query: 256 EELILLYKKSEVFVLP-SLSEAF---GIVLLEAMASEVPVIGTSVGGIPEIIGD--AGII 309
E++ + V V P SE F + ++E MA+ +P++ + +G + +II D GI+
Sbjct: 267 EQVPHWLSQMSVAVAPYPASEDFYFSPLKVVEYMAAGLPIVASCIGQVKDIIDDGVTGIL 326
Query: 310 VPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVA 353
P + ALA A+ + + + ++LG R V + ++WD VA
Sbjct: 327 CLPGEPTALAQALERLWRSPQQRQQLGLAARDFVLKHHTWDRVA 370
>sp|P39862|CAPM_STAAU CAPM PROTEIN >gi|506709|gb|AAA64652.1| (U10927) CapM
[Staphylococcus aureus]
Length = 380
Score = 86.2 bits (210), Expect = 5e-16
Identities = 99/378 (26%), Positives = 162/378 (42%), Gaps = 65/378 (17%)
Query: 31 LRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPGLIKDGINLSMIAKSSNSLVEYLKGF 90
LRK +V IV++ +GKE L++Y ++ V + +D IA S+ L LK
Sbjct: 26 LRKKNMDVHIVSS---DGKE--LKQYDNEIAHVIPMKRD------IALFSD-LKSLLKMI 73
Query: 91 DVVHAQHAFTPLSLKSIPAGNKVGALT-LVTNHSVEFENFSILNGFSKMSYSYFKMYLGQ 149
+ H + F S P +G + +T + L + + YF +YL +
Sbjct: 74 LLFHKEKPFIVNS--GTPKAGLIGTIAAFITQRPIRIYTVRGLRLETVKGFKYFVLYLME 131
Query: 150 VKVG-------IGVS-----KASVSFLRKFTNAPIVEI--PNGVNIERFNGRGREWGTRN 195
K+ I +S K S L K ++ NG+ E+F + +
Sbjct: 132 -KIAMFCATDIIAISESLKHKIITSNLAKENKITVLGFGSSNGIQFEKFQLDNNKLEEKY 190
Query: 196 ---------ILYVGRLEPRKGVNYLISAMKFVEGK-----LTIVGDGSMRKVLKMQAKKL 241
I YVGR+ KG++ LI + K + K L ++G +
Sbjct: 191 HKLLNDNFVIGYVGRIVKDKGIHELIQSFKIIVSKGYNVKLLVIGSLETENSI------- 243
Query: 242 GVEDKVEFLGFISQEELILL---------YKKSEVFVLPSLSEAFGIVLLEAMASEVPVI 292
D+ ++L ++L+ Y VFV P+ E FG V +EA A EVPVI
Sbjct: 244 ---DESDYLFLTQNPNVVLIKHVSDPISFYNNMNVFVFPTHREGFGNVSIEAQALEVPVI 300
Query: 293 GTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWD 350
T+V G + + G+ G IV D KA+A I +++++ + +G GRKRVE +S
Sbjct: 301 TTNVTGAIDTVVNGETGFIVEKGDFKAIAEKIEKLINDESLRETIGHNGRKRVENKFSSQ 360
Query: 351 VVAERTERLYRGELGDSD 368
++ E E +Y L +S+
Sbjct: 361 IIWEELESMYNTFLKESE 378
>pir||I76776 Mannosyltransferase (EC 5.-.-.-) B - Escherichia coli
>gi|598471|dbj|BAA07751.1| (D43637) mannosyltransferase
B [Escherichia coli]
Length = 381
Score = 85.4 bits (208), Expect = 9e-16
Identities = 51/172 (29%), Positives = 89/172 (51%), Gaps = 8/172 (4%)
Query: 197 LYVGRLEPRKGVNYLISAMKFVEGK------LTIVGDGSMRKVLKMQAKKLGV-EDKVEF 249
LY+G +EPRK + L+ A + + + L + G + Q + G E + +
Sbjct: 209 LYIGTMEPRKNIRGLLQAYQLLPMETRMRYPLILSGYRGWEDDVLWQLVERGTREGWIRY 268
Query: 250 LGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGII 309
LG++ E+L LY + FV PS E FG+ +LEAM+ VPV+ ++V +PE++GDAG++
Sbjct: 269 LGYVPDEDLPYLYAAARTFVYPSFYEGFGLPILEAMSCGVPVVCSNVTSLPEVVGDAGLV 328
Query: 310 VPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYR 361
P D A++ I L + + G + ++ +SW+ +T Y+
Sbjct: 329 ADPNDVDAISAHILQSLQDDSWREIATARGLAQAKQ-FSWENCTTQTINAYK 379
>gb|AAC38772.1| (AF010183) glycosyltransferase WbpZ [Pseudomonas aeruginosa]
Length = 381
Score = 85.4 bits (208), Expect = 9e-16
Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 6/175 (3%)
Query: 192 GTRNILYVGRLEPRKGVNYLISAMKFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLG 251
G R L+VG + KG++ L+ A++ + + IVG G ++ L Q LG+ + V FLG
Sbjct: 192 GPRFFLFVGVMRYYKGLHILLDALQGTDYPVVIVGAGPLQAELYAQTAALGLRN-VHFLG 250
Query: 252 FISQEELILLYKKSEVFVLPS--LSEAFGIVLLEAMASEVPVIGTSVG---GIPEIIGDA 306
+ E+ + L + S V PS SEAFGI LLE P+I + +G I G+
Sbjct: 251 RVDDEDKVALLQLSYAMVFPSHLRSEAFGISLLEGAMYGKPMISSEIGTGTSYINIHGET 310
Query: 307 GIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYR 361
G++VPP A A+ + + + A+ +G+ R +L++ + + R LYR
Sbjct: 311 GLVVPPSQPAAFRQAMRWLWEHPQQAEEMGRNAEARYRQLFTAEEMGRRWSELYR 365
>gb|AAF04384.1|AF189151_7 (AF189151) WbdB; mannosyl transferase B [Klebsiella pneumoniae]
Length = 381
Score = 85.4 bits (208), Expect = 9e-16
Identities = 51/172 (29%), Positives = 89/172 (51%), Gaps = 8/172 (4%)
Query: 197 LYVGRLEPRKGVNYLISAMKFVEGK------LTIVGDGSMRKVLKMQAKKLGV-EDKVEF 249
LY+G +EPRK + L+ A + + + L + G + Q + G E + +
Sbjct: 209 LYIGTMEPRKNIRGLLQAYQLLPMETRMRYPLILSGYRGWEDDVLWQLVERGTREGWIRY 268
Query: 250 LGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGII 309
LG++ E+L LY + FV PS E FG+ +LEAM+ VPV+ ++V +PE++GDAG++
Sbjct: 269 LGYVPDEDLPYLYAAARTFVYPSFYEGFGLPILEAMSCGVPVVCSNVTSLPEVVGDAGLV 328
Query: 310 VPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYR 361
P D A++ I L + + G + ++ +SW+ +T Y+
Sbjct: 329 ADPNDVDAISAHILQSLQDDSWREIATARGLAQAKQ-FSWENCTTQTINAYK 379
>emb|CAB91117.1| (AL355913) putative glycosyl transferase [Streptomyces coelicolor
A3(2)]
Length = 391
Score = 85.4 bits (208), Expect = 9e-16
Identities = 58/169 (34%), Positives = 83/169 (48%), Gaps = 14/169 (8%)
Query: 196 ILYVGRLEPRKGVNYLISAMKFV-----EGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFL 250
IL RL PRKG + LI A+ +V + L +VGDG L+ A + GV D V F
Sbjct: 198 ILCAARLVPRKGQDTLIRALPWVRRAVPDAVLLLVGDGPHAAGLRQLALREGVMDSVHFA 257
Query: 251 GFISQEELILLYKKSEVFVLPSLS-------EAFGIVLLEAMASEVPVIGTSVGGIPEII 303
G L Y ++ F +P + E GIV LEA AS +PV+ GG P+ +
Sbjct: 258 GGHPHHALPAFYAAADAFAMPCRTRKGGLELEGLGIVYLEAAASGLPVVAGDSGGAPDAV 317
Query: 304 --GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWD 350
G+ G +V R A A+ + +L + + A+ +G GR V +SWD
Sbjct: 318 REGETGHVVDGRSVAATADRLIRLLRDPRLARAMGGAGRDWVRTAWSWD 366
>gb|AAG18700.1| (AE004975) LPS biosynthesis protein; Lpb [Halobacterium sp. NRC-1]
Length = 338
Score = 85.4 bits (208), Expect = 9e-16
Identities = 85/339 (25%), Positives = 156/339 (45%), Gaps = 28/339 (8%)
Query: 34 MGHEVSIVTNALTNGKEGELQKYGIDLIKVPGLIKDGINLSMIAKSSNSLVEYLKGFDVV 93
MGH+V+++T + Q+ G +++ ++ + + I+ + FDVV
Sbjct: 8 MGHDVTVLTVTDDDSLPRHEQRDGYTVVRRKPTVE--LLGNEISAGVAKFLRNADDFDVV 65
Query: 94 HAQHAFTPLSLKSIPAGNKVGALTL-VTNHSVEFENFS--ILNGFSKMSYSYFKMYLGQV 150
HA H+ S ++G L +TNH + +N + + + K + + Q
Sbjct: 66 HA-HSHLYFSTNLAALKRRLGETPLAITNHGLYSQNAPEWLFDAYLK---TVGRWTFNQA 121
Query: 151 KVGIGVSKASVSFLRKF-TNAPIVEIPNGVNIERFNGRGREWGTRN-----ILYVGRL-- 202
V + +R+F ++ I +PNGV+ ERF G + +L+VGRL
Sbjct: 122 DVVFCYTDEDRERVREFGVDSRIEVVPNGVDTERFTPDGPTSDLIDHDGPVVLFVGRLVE 181
Query: 203 --EPRKGVNYLISAMKFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELIL 260
P+ V + + ++ KL +VGDG MR+ L+ ++ E+ V FLG + +E+
Sbjct: 182 GKRPQDAVKAVSRVAEDMDVKLYVVGDGPMREELE----EMSGEETV-FLGQLPYDEMPA 236
Query: 261 LYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGIIVPPRDSKALAN 320
+Y+ +V VLPS +E +LE AS VPV+ +++ +I G V + A
Sbjct: 237 VYRAGDVLVLPSRAEGLPRTVLEGFASGVPVVASNLEHTKAVIQKGGQTVDVGNVDGYAR 296
Query: 321 AINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERL 359
AI ++ +++T ++GR V + + W A T +
Sbjct: 297 AIQEVIDDRETR----QVGRGVVVKTFQWKDTARTTTEI 331
>pir||C75423 probable mannosyltransferase - Deinococcus radiodurans (strain R1)
>gi|6458966|gb|AAF10795.1|AE001970_10 (AE001970)
mannosyltransferase, putative [Deinococcus radiodurans]
Length = 402
Score = 85.0 bits (207), Expect = 1e-15
Identities = 86/355 (24%), Positives = 149/355 (41%), Gaps = 22/355 (6%)
Query: 1 MESLKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDL 60
M L+I L +D + P G+ V L+ LR +GH+V +V + +
Sbjct: 1 MNPLRIGLFTDTFLPDQNGIVTSVCLLSDELRALGHQVDVVAPRFPEHLDRRPDVRRVAS 60
Query: 61 IKVPGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVT 120
++ P L L+ + S + + +D++H T L L K G + T
Sbjct: 61 VRYPLL--PTYRLAWPGRRS-----FEQRYDLIHTHTPLT-LGLAGARLARKWGVPHVAT 112
Query: 121 NHSVEFENFSILNGFSKMSYSYFKM------YLGQVKVGIGVSKASVSFLRKFTNAPIVE 174
H+ + G ++++ + M G+ I + ++ LR+ V
Sbjct: 113 YHTHLEAYTHYVPGMTQLNRAVHFMPKVVGRLYGEADAVITPTAGTLDTLRQAGITDAVV 172
Query: 175 IPNGVN---IERFNGRGREW--GTRNILYVGRLEPRKGVNYLISAMKFVEGK-LTIVGDG 228
IP ++ +E W GTR +L VGRL K + ++ + + G L I+G+G
Sbjct: 173 IPTSIDPAVLEAAPPIASPWPPGTRRLLTVGRLAREKRFDLVLDTLADLPGAHLVILGEG 232
Query: 229 SMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASE 288
R L+ A++LGV + V F+G E+ Y+ +E+FV S +E G+VL EA
Sbjct: 233 PERTHLEDHAQRLGVAEHVTFVGVRPWTEIGAYYRLAELFVFASDTETQGLVLQEAQLMG 292
Query: 289 VPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRK 341
VPV+ G + G +G + P D L +L + + R + R+
Sbjct: 293 VPVVAVGARGTLTGVQSGYSGYLTAPGDVPELVRRARELLESPEQYARFSRQARE 347
>pir||T44601 probable glycosyltransferase [imported] - Rhizobium meliloti
megaplasmid 2 >gi|4929439|gb|AAD33995.1|AF148072_3
(AF148072) putative glycosyltransferase [Sinorhizobium
meliloti]
Length = 415
Score = 84.7 bits (206), Expect = 2e-15
Identities = 54/188 (28%), Positives = 99/188 (51%), Gaps = 21/188 (11%)
Query: 177 NGVNIERFNGRGREWGTRN---------ILYVGRLEPRKGVNYLISAMKF----VEGKLT 223
+G++++RF E R+ I+ VGR P+KG + L+ A+ + +
Sbjct: 203 HGLDLDRFPAFEGEHSRRDGADPDDPVRIVSVGRAVPKKGYDVLLKALSLLPADINWRFE 262
Query: 224 IVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFG----- 278
+G G + L+ A KLG+ED++ + G + Q++++ Y+ +++F L A G
Sbjct: 263 HIGAGELTGGLQALAAKLGIEDRIRWHGALDQKDVLGRYRGADIFALACRVAADGDRDGL 322
Query: 279 -IVLLEAMASEVPVIGTSVGGIPEIIGDA--GIIVPPRDSKALANAINAILSNQKTAKRL 335
VL+EA + + I T+V GIPE++ D G++VPP + LA A+ ++ + + +RL
Sbjct: 323 PNVLVEASSQRLACISTAVSGIPELLEDGKNGLVVPPESPEPLAAALERLIRDPELRRRL 382
Query: 336 GKLGRKRV 343
G +RV
Sbjct: 383 GAARERRV 390
>pir||F72257 lipopolysaccharide biosynthesis protein-related protein -
Thermotoga maritima (strain MSB8)
>gi|4981969|gb|AAD36476.1|AE001793_6 (AE001793)
lipopolysaccharide biosynthesis protein-related protein
[Thermotoga maritima]
Length = 471
Score = 84.7 bits (206), Expect = 2e-15
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 17/199 (8%)
Query: 175 IPNGVNIERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFVEG----KLT--IVGDG 228
IPNG+N+E ++ + + +VGR+ K + I A+ V+ KLT I+G
Sbjct: 265 IPNGINVEEYDLPPEKHEGFVVGFVGRVARIKDLKTAIRAISIVKEVVGEKLTFLIIGPV 324
Query: 229 SMRKVL---KMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAM 285
L K + L +ED VEFLG + +E Y K ++ +L S+SE +V+LEAM
Sbjct: 325 DAEDYLAECKRLVRVLRLEDTVEFLGPQNVKEY---YPKFDLLLLSSVSEGQPLVILEAM 381
Query: 286 ASEVPVIGTSVGGIPEII----GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRK 341
A+ VP++ T VG +II G GI+VPP+D +++ AI + +++ K +K
Sbjct: 382 AAGVPIVATDVGACRDIIYDKDGQCGIVVPPKDHLSMSKAIIKLYEDKELRDTFSKNAKK 441
Query: 342 RVERLYSWDVVAERTERLY 360
V++ Y + + E+ LY
Sbjct: 442 VVQK-YRVETMIEKYRNLY 459
>pir||H83539 probable glycosyl transferase PA0842 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946738|gb|AAG04231.1|AE004519_2 (AE004519) probable
glycosyl transferase [Pseudomonas aeruginosa]
Length = 406
Score = 84.3 bits (205), Expect = 2e-15
Identities = 94/381 (24%), Positives = 168/381 (43%), Gaps = 47/381 (12%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIK- 62
L IAL+S+ Y P++ GVA + L L+++GH V +V G +G + L +
Sbjct: 5 LSIALISETYPPEVNGVANTLGRLHAGLQQLGHRVQVV-RPRQPGDDGRRSDAELVLTRG 63
Query: 63 --VPGLIKDGINLSMIAKSSNSLVEYLKGF-----DVVHAQHAFTPLSLKSIPAGNKVGA 115
+PG G+ M +SL + L+ + DV++ PL ++ A ++G
Sbjct: 64 WPLPGY--PGLQWGM-----SSLHKLLRCWKRQRPDVLYIATE-GPLGFSALRAARRLG- 114
Query: 116 LTLVTNHSVEFENFSILNGF---SKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPI 172
+ V+ F+ +S GF +++ Y + + + ++ + S + L++ +
Sbjct: 115 IPAVSGFHTNFQQYSEHYGFGPLTRLVTGYLRWFHNRTQMTLVPSGSQRMELQRRGFERL 174
Query: 173 VEIPNGVNIERFNGRGRE------WGTRN----ILYVGRLEPRKGVNYL-------ISAM 215
+ GV+ + F+ R+ WG +L+VGRL K + L +A
Sbjct: 175 NLLSRGVDSQLFHPSRRDPELRRRWGLGEQDIAVLHVGRLAAEKNLGLLGGTFRALCAAH 234
Query: 216 KFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSE 275
++ +L +VGDG RK L+ + F G E L Y ++F+ PSLSE
Sbjct: 235 PQLKLRLVLVGDGPERKHLERDLPE------ALFCGVQRGETLAAHYASGDLFLFPSLSE 288
Query: 276 AFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAK 333
FG V+LEA A+ + V+ + I G G++ P D + +L +Q+ +
Sbjct: 289 TFGNVVLEAQAAGLAVVAFDQAAAGQHIRHGHNGVLAAPGDKSGFVEVASWLLDDQERLR 348
Query: 334 RLGKLGRKRVERLYSWDVVAE 354
R+ R+ R WD + E
Sbjct: 349 RVRLNARQHASR-QGWDSIVE 368
>gb|AAD46732.1|AF078736_12 (AF078736) putative glycosyl transferase [Escherichia coli]
Length = 374
Score = 84.3 bits (205), Expect = 2e-15
Identities = 71/237 (29%), Positives = 109/237 (45%), Gaps = 24/237 (10%)
Query: 146 YLGQVKVGIGVSKASVSFLRKFT-NAPIVEIPNGVNIERF----NGRGREWGTRNI---- 196
+L + + RK T IVEIPN +N +F N R + N+
Sbjct: 129 FLASITTNVSKEAVQEFIARKATPKNKIVEIPNFINTNKFDFDINVRKKTRDAFNLKDST 188
Query: 197 ---LYVGRLEPRKGVNYLISAMKFV---------EGKLTIVGDGSMRKVLKMQAKKLGVE 244
L VGRL K L++A+ + + L I GDG++R L +L +
Sbjct: 189 AVLLAVGRLVEAKDYPNLLNAINHLILSKTSNCNDFILLIAGDGALRNKLLDLVCQLNLV 248
Query: 245 DKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIG 304
DKV FLG + ++ L +++FVL S E FG+V+ EAMA E PV+ T GG+ E++G
Sbjct: 249 DKVFFLG--QRSDIKELMCAADLFVLSSEWEGFGLVVAEAMACERPVVATDSGGVKEVVG 306
Query: 305 DAGIIVPPRDSKALANAINAILSNQKTAKR-LGKLGRKRVERLYSWDVVAERTERLY 360
++P + LA I L A++ +G R+ + +S + ERLY
Sbjct: 307 PHNDVIPVSNHILLAEKIAETLKIDDNARKIIGMKNREYIVSNFSIKTIVSEWERLY 363
>dbj|BAB05402.1| (AP001512) unknown conserved protein [Bacillus halodurans]
Length = 375
Score = 83.9 bits (204), Expect = 3e-15
Identities = 96/381 (25%), Positives = 172/381 (44%), Gaps = 43/381 (11%)
Query: 14 FPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEG----------ELQKYGIDLIKV 63
+P +GG + L L + GHEV +T+++ E E+ +Y + K
Sbjct: 10 YPTVGGSGVVATELGKLLAEKGHEVHFITSSVPFRLEPVNPNIYFHEVEVNQYSV--FKY 67
Query: 64 PGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVG-ALTLVTNH 122
P +L++ +K + V + D++H +A P ++ +I A VG +L +VT
Sbjct: 68 PPY-----DLTLSSKMAE--VAKRQELDLLHVHYA-VPHAICAILAKQMVGDSLKVVT-- 117
Query: 123 SVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKF--TNAPIVEIPNGVN 180
++ + ++L G+ K + + + VS V + T PI + N V+
Sbjct: 118 TLHGTDITVL-GYDPALAEIIKFGIEKSDLVTAVSDDLVKQTKTLLHTEKPIETVYNFVD 176
Query: 181 IERFNGR---------GREWGTRNILYVGRLEPRKGVNYLISAMKF----VEGKLTIVGD 227
+ + G + +++V K V +I + V+ KL ++GD
Sbjct: 177 PREYYRKDVSELKATYGIGEDEKVVVHVSNFRRVKRVPDIIRCFRIIREHVKAKLLLIGD 236
Query: 228 GSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMAS 287
G + K+L ++D V LG +Q+ + L S+V +L S E+FG+V LEAMA
Sbjct: 237 GPDATLACHLIKELDLKDDVLMLG--NQKHIPELMSLSDVMLLLSEKESFGLVALEAMAC 294
Query: 288 EVPVIGTSVGGIPEIIGD--AGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVER 345
VPVIG ++GGIPE+I D G I D + +A +L+N++ + + R
Sbjct: 295 GVPVIGANIGGIPEVIVDEETGYICEIGDIQGVAQKAIELLTNKRRHEMFAEASINRAAT 354
Query: 346 LYSWDVVAERTERLYRGELGD 366
++S + + + E LY L +
Sbjct: 355 VFSSEQIVRQYEDLYEQLLSE 375
>pir||E71699 capm protein (capM2) RP414 - Rickettsia prowazekii
>gi|3860971|emb|CAA14871.1| (AJ235271) CAPM PROTEIN
(capM2) [Rickettsia prowazekii]
Length = 338
Score = 83.9 bits (204), Expect = 3e-15
Identities = 76/308 (24%), Positives = 149/308 (47%), Gaps = 23/308 (7%)
Query: 71 INLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLS---LKSIPAGNKVGALTLVTNHSVEFE 127
IN++ NSL+ + + F +++ PLS LK I K + N S+ F
Sbjct: 34 INVTSYRAKINSLL-HKRSFKLINLL-PIDPLSVLILKYIIYKTKPDIIIAHGNRSINFS 91
Query: 128 NFSILNGFSKM--SYSYFKMYLGQVKVGIGVSKASVSFLRK--FTNAPIVEIPNGVNIER 183
+ + + +++Y L + I ++ FL K F + I +PN +NI +
Sbjct: 92 KLAKPHNTKLIGIAHNYSLKGLRKCDFAIALTYHMKEFLLKNNFAESRIFILPNMINITK 151
Query: 184 FNGRGREWGTRNILYVG---RLEPRKGVNYLISAMKFVEGK-----LTIVGDGSMRKVLK 235
+ + + ++ +G R +KG++ I A+K ++ K + I G+G+ + L
Sbjct: 152 NFVPNKIY--KKVIVIGVLARFVAKKGIDVFIKAIKLLKDKQYNIQVVIGGNGNEKDNLI 209
Query: 236 MQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTS 295
KL ++D++ F G+++ ++ +K+ ++F LPSL E FGI++LEAM + VP++ T
Sbjct: 210 ALVHKLNLQDQISFTGWVNDKDTF--FKQIDIFCLPSLHEPFGIIILEAMQASVPIVSTD 267
Query: 296 VGGIPEIIGDA--GIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVA 353
G EI+ G+I + LA I ++ N A + K ++++ Y VV+
Sbjct: 268 TEGPKEILKHLKDGLICKVGSIEDLAEKIIYLIDNPLQAAKFSKNAYLKLKQNYDIKVVS 327
Query: 354 ERTERLYR 361
++ + + +
Sbjct: 328 KKLQYILK 335
>gi|11497665 mannosyltransferase A (mtfA) [Archaeoglobus fulgidus]
>gi|7483862|pir||E69255 mannosyltransferase A (mtfA)
homolog - Archaeoglobus fulgidus
>gi|2650604|gb|AAB91182.1| (AE001103)
mannosyltransferase A (mtfA) [Archaeoglobus fulgidus]
Length = 1213
Score = 83.5 bits (203), Expect = 4e-15
Identities = 62/181 (34%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
Query: 194 RNILYV-GRLEPRKGVNYLISAM----KFVEGKLTIVG----DGSMRKVLKMQAKKLGVE 244
R +LYV G + RK V LI A K ++ KL +V D + LK A+K+G
Sbjct: 219 RYLLYVPGGYDFRKNVEALILAFGKLPKEIKDKLQLVIASKIDEYNERRLKELARKVGAN 278
Query: 245 DKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIG 304
V G+I E+L LY E+FV PSL E FG+ ++EAMA PVIG+ I EII
Sbjct: 279 --VVLAGYIRDEDLSTLYNLCELFVHPSLHEGFGLPVVEAMACGAPVIGSDSSSIAEIIK 336
Query: 305 DAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGEL 364
+ + P+D ++++ I +L N + + L + G KR + +SW A+ + ++ +
Sbjct: 337 RSDALFNPKDINSISSKILEVLENDEFREELRRYGLKRAKD-FSWRESAKNILKFFKEKF 395
Query: 365 G 365
G
Sbjct: 396 G 396
>pir||C82750 mannosyltransferase XF0887 [imported] - Xylella fastidiosa (strain
9a5c) >gi|9105801|gb|AAF83697.1|AE003928_3 (AE003928)
mannosyltransferase [Xylella fastidiosa]
Length = 860
Score = 83.5 bits (203), Expect = 4e-15
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 196 ILYVGRLEPRKGVNYLISAMKFV------EGKLTIVGDG-SMRKVLKMQAKKLGVEDK-V 247
+LY G L+ RK V L+ A + +L ++GD + + + ++LG++ + V
Sbjct: 228 VLYNGGLDQRKNVPALLRAFALLPMAIRQRHQLVVLGDDREVHRPMMALCRQLGLDQQEV 287
Query: 248 EFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAG 307
F G ++ +L+ LY +FV PS E FG+ +LEAMA P + + +PE+ G
Sbjct: 288 VFTGRVNDSDLVALYGLCALFVFPSRLEGFGLPVLEAMACGAPTLCSDAASLPEVAGRQD 347
Query: 308 IIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAER 355
I+ PP D AL+ ++ +L + + + L G +R ++WD VA+R
Sbjct: 348 ILFPPEDHVALSARMSQVLDDPQWLQSLRDYGLRRA-TAFTWDRVAQR 394
>gi|11497939 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7451323|pir||G69290 probable hexosyltransferase (EC
2.4.1.-) AF0327 [similarity] - Archaeoglobus fulgidus
>gi|2650310|gb|AAB90909.1| (AE001082) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 357
Score = 83.1 bits (202), Expect = 5e-15
Identities = 66/218 (30%), Positives = 99/218 (45%), Gaps = 14/218 (6%)
Query: 154 IGVSKASVSFLRKFTNAPIVEIPNGVNIERFNGRGREWGTRNILYVGRLEPRKGVNYLIS 213
+ VS+ + L + IPNG++ E + ++++ GRL KG + LI
Sbjct: 151 VAVSETTARNLLNLGVKNVEVIPNGIDFEFIRRVEASEESLDVVFAGRLIKEKGADLLIK 210
Query: 214 AMKFV-EGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPS 272
AMK + + IVG+G + L A + V+F GF++ LI K ++VFVLPS
Sbjct: 211 AMKLLPDYSCLIVGEGPEKASLIKSAP-----ENVKFAGFMNYGYLIATLKSAKVFVLPS 265
Query: 273 LSEAFGIVLLEAMASEVPV--IGTSVGGIPEIIGDAGIIVPPRDSKALANAINAILSNQK 330
E FGI LEA A +PV I + + EI + G I P A+ S +K
Sbjct: 266 RREGFGIAALEANACGLPVVTINHPMNAVVEIARETGFIASPSPQDIAEKIKIAMESRKK 325
Query: 331 TAKRLGKLGRKRVERLYSWDVVAERTERLYRGELGDSD 368
+R RK + W V+A++ Y G SD
Sbjct: 326 MRRRCVDYARK-----FDWSVIAKKMADFY-DNCGSSD 357
>gb|AAG18698.1| (AE004975) LPS glycosyltransferase; Lpg [Halobacterium sp. NRC-1]
Length = 333
Score = 82.7 bits (201), Expect = 6e-15
Identities = 81/305 (26%), Positives = 133/305 (43%), Gaps = 34/305 (11%)
Query: 73 LSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLK-SIPAGNKVGALTLVTNHSVEFENFSI 131
+S I KS++ LV + HA PL L +P LV HS + N I
Sbjct: 54 ISKIVKSTDILV-----CSLFHATAIGVPLGLLLQVPK-------LLVWQHSTSYSN-QI 100
Query: 132 LNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFL-RKFTNAPIVEIPNGVNIERFNGRGRE 190
+ + +++Y L + + SV +K + PI G++++ +
Sbjct: 101 RSAYYRLAYRAADRVLADSDAVMEMLVDSVGVPDQKISTLPIA----GIDVKEYQPSKTH 156
Query: 191 WGTRNILY--VGRLEPRKGVNYLISAMKFVEGKLT--IVGDGSMRKVLKMQAKKLGVEDK 246
NI VGRL KG + LI + + L I G+G R+ L+ + D
Sbjct: 157 PSHENITVSTVGRLANVKGYDDLIRCARDIGDDLQFQIAGEGEERERLESKTP-----DN 211
Query: 247 VEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII--G 304
V F G + E++ S+++ PS E + ++EAMA +PV+ + VGGI E + G
Sbjct: 212 VNFQGMVPNEQIPQFLNNSDIYFQPSKYEGLCMAVIEAMACGLPVVASDVGGITESVVPG 271
Query: 305 DAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGEL 364
+ G + PRD + + + N K++G GRKRV YS +A R +R +
Sbjct: 272 ETGFLCRPRDIDCFSERLQQLSENPALRKQMGTAGRKRVISEYSQKALA----RQFRKAI 327
Query: 365 GDSDT 369
++T
Sbjct: 328 DQTET 332
>gb|AAK42884.1| Glycosyltransferase, putative [Sulfolobus solfataricus]
Length = 349
Score = 82.3 bits (200), Expect = 8e-15
Identities = 88/346 (25%), Positives = 158/346 (45%), Gaps = 28/346 (8%)
Query: 16 KIGGVAIHVHNLAIHLRKMGHEVSIVTNALTN-GKEGELQKYGIDLIKVPGLIKDGINLS 74
K GG ++ ++ L K G V+ ++ + KE E++ I +I+ I +
Sbjct: 15 KAGGAEQVIYEISRRLVKKGVSVTWLSEEIKGLPKEEEIEN--IRIIRRGNSITLHLYAP 72
Query: 75 MIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFENFSILNG 134
+ A+ +++ V HA ++ L K N + + V V++E LN
Sbjct: 73 IEARRHEIVID-----SVAHAVPFYSYLVNK-----NAIALVHHVHQDVVKYE----LNP 118
Query: 135 FSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAP---IVEIPNGVNIERFNGRGREW 191
+ ++ + + K I VS + L + A I I NG++ + G++
Sbjct: 119 IMARAVAFSERSVSNYKSIIAVSNTTKRDLVERLKAKEDRIEVIHNGIDHNIYRP-GKKA 177
Query: 192 GTRNILYVGRLEPRKGVNYLISAMKFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLG 251
IL++GRL+ K I K V+ KL + G G + + + K + E +LG
Sbjct: 178 SEPTILWIGRLKKYKNPLDAIDVAKRVKAKLVMAGGGDLENEVVQKIKTINGE----YLG 233
Query: 252 FISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGII 309
+S+E+ I LY+ + + ++ S E + +V +EA A PVI + G +PEII G G I
Sbjct: 234 RVSEEDKIRLYQSAWIVIVTSFIEGWSMVTVEANACGTPVIAYNKGSLPEIIKNGVNGYI 293
Query: 310 VPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAER 355
V +D +A++ IN ++ ++K K L K + Y WD +E+
Sbjct: 294 VNYKDIEAMSKIINELIEDEKRIKELWKSSYEE-SLNYDWDKSSEK 338
>pir||S77339 hypothetical protein sll1723 - Synechocystis sp. (strain PCC 6803)
>gi|1652521|dbj|BAA17442.1| (D90906) hypothetical
protein [Synechocystis sp.]
Length = 413
Score = 82.3 bits (200), Expect = 8e-15
Identities = 68/219 (31%), Positives = 102/219 (46%), Gaps = 25/219 (11%)
Query: 142 YFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGVNIERFNGRGREWGTRNILYVGR 201
Y + YL Q + G SK R + + E+P + R I+ V R
Sbjct: 187 YNRTYLQQ-QYGEAASKVQ----RIYNGMDLTELP-------YQPRSENCEPPLIISVSR 234
Query: 202 LEPRKGVNYLISAMKFV-----EGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQE 256
L +KG+ YLISA + E + IVG GS+ L+ Q + +E VE G Q
Sbjct: 235 LVEKKGLTYLISACDLLRRWDCEFRCQIVGAGSLEATLRSQIVQHQLEPWVEITGPKPQG 294
Query: 257 ELILLYKKSEVFVLPSL------SEAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGI 308
E+ L K+++VF P + + VLLEA+A P + T V GIPEII + G+
Sbjct: 295 EVFQLLKRAKVFAAPYIVGRDGNRDGLPTVLLEAIALGTPCVATDVTGIPEIIQHQETGL 354
Query: 309 IVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLY 347
+V D + LA A+ IL+ R + R+R+E+ +
Sbjct: 355 LVAQNDPEQLAKALQTILNQADLRHRYAQQARQRLEQAF 393
>pir||B83264 hypothetical protein PA3059 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9949165|gb|AAG06447.1|AE004730_11
(AE004730) hypothetical protein [Pseudomonas aeruginosa]
Length = 507
Score = 82.3 bits (200), Expect = 8e-15
Identities = 70/209 (33%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 175 IPNGVNIERFNG--RGREWGTRNIL-YVGRLEPRKGVNYLISAMKFV-----EGKLTIVG 226
IPNG++++ + G R G ++ VGR+ P K V I AM+ V E + IVG
Sbjct: 296 IPNGIDLDAWTGALERRPPGIPPVVGLVGRVVPIKDVKTFIRAMRGVVSAMPEAEGWIVG 355
Query: 227 ----DGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLL 282
D + LG++DKV+FLGF E++ + + VL S+SEA +V+L
Sbjct: 356 PEEEDPDYASECRSLVASLGLQDKVKFLGFRRIGEVL---PQLGLMVLTSISEAQPLVIL 412
Query: 283 EAMASEVPVIGTSVGGIPEII----------GDAGIIVPPRDSKALANAINAILSNQKTA 332
EA A+ PV+ + VG E+I G AG +V D +A + AI A+L N +
Sbjct: 413 EAWAAGAPVVSSDVGSCRELIEGADAEDRALGRAGEVVAIADPQATSRAILALLRNPQRW 472
Query: 333 KRLGKLGRKRVERLYSWDVVAERTERLYR 361
+ +G +RVER Y+ ++ R LYR
Sbjct: 473 QAAQAVGLQRVERYYTEALMLGRYRGLYR 501
>pir||H69147 LPS biosynthesis RfbU related protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621430|gb|AAB84876.1| (AE000822) LPS biosynthesis
RfbU related protein [Methanobacterium
thermoautotrophicum]
Length = 395
Score = 81.9 bits (199), Expect = 1e-14
Identities = 100/360 (27%), Positives = 162/360 (44%), Gaps = 44/360 (12%)
Query: 4 LKIALVSDWYFP--KIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLI 61
L+I V+ ++ P + GG V++LA GHEV++ T +G ++ +++
Sbjct: 13 LRILHVTPYFKPSWEAGGPPRSVYDLASRQVSAGHEVTVYTT------DGFKRRLDVEVN 66
Query: 62 KVPGLIKDGI------NLSMIAKSSNSLVEYLK----------GFDVVHAQHAFTPLSLK 105
+ L DGI NLSM + +L LK FDVVH T L+
Sbjct: 67 RP--LDVDGIRTYYFRNLSMYLAGNMNLPVPLKLPYVAWREIREFDVVHIHEHRTFLAAV 124
Query: 106 SIPAGNKVGALTLVTNH-SVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFL 164
++ G +V H SV + + L MY G ++ + S F
Sbjct: 125 VATLASRAGVPYIVQPHGSVPTMSRATLKEVFDFIAGNRIMY-GASRI-VATSTVESGFY 182
Query: 165 RK----FTNAPIVEIPNGVNIERFNGRG---REWG---TRNILYVGRLEPRKGVNYLISA 214
RK IV++PN V+I RG ++WG R ILY+GR+ RKG++ L+ A
Sbjct: 183 RKVYPKLDAEAIVKVPNPVDIPHRPSRGLFRKKWGLEDARIILYLGRIHERKGLDILLRA 242
Query: 215 MKFVEGKLTIV---GDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLP 271
+ ++ +V D + L +LG+ ++V G + + + + Y ++VFVLP
Sbjct: 243 FRDMDEDTVLVITGPDDHYLERLMGLIDELGIGERVLLTGPLYEMDKLEAYVDADVFVLP 302
Query: 272 SLS--EAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGIIVPPRDSKALANAINAILSNQ 329
S S E+FG EA+A PV+ TS GI E + I+ ++ L +AI +L +
Sbjct: 303 SASKYESFGNSAAEAIACGTPVVVTSSCGISEWMDPGDGIIARPSARDLRDAIIRVLKER 362
>gi|11497659 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7451322|pir||F69254 probable hexosyltransferase (EC
2.4.1.-) AF0038 [similarity] - Archaeoglobus fulgidus
>gi|2650614|gb|AAB91191.1| (AE001104) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 361
Score = 80.8 bits (196), Expect = 2e-14
Identities = 63/196 (32%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 175 IPNGVNIERFN---GRGREWGTRNILYVGRLEPRKGVNYLISAMKFV-EGKLTIVGDGSM 230
IPNGV+ R + EW ++++VGRL K + L AMK + E +VGDG
Sbjct: 170 IPNGVDFPRISEIPASSEEW---DVIFVGRLIREKNLELLFDAMKLLPELNCLVVGDGPE 226
Query: 231 RKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVP 290
R+ L A V+F G + EE+I + K S+VF +PS E FGI LEA A +P
Sbjct: 227 RERLSKIAPA-----NVDFGGSLGYEEVISMMKSSKVFAIPSRREGFGISALEANACGLP 281
Query: 291 V--IGTSVGGIPEIIGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVE--RL 346
V I + + EI G + P ++ A I L ++ ++ K + +
Sbjct: 282 VVTIRHQMNAVVEIAEKTGFVAEPH-ARDFAEKIRLALEMRR------EMREKCINFAKN 334
Query: 347 YSWDVVAERTERLYRG 362
+ W+V+A R E Y G
Sbjct: 335 FDWEVIARRLEEFYEG 350
>emb|CAC04040.1| (AL391406) putative transferase [Streptomyces coelicolor A3(2)]
Length = 496
Score = 80.4 bits (195), Expect = 3e-14
Identities = 91/400 (22%), Positives = 171/400 (42%), Gaps = 62/400 (15%)
Query: 18 GGVAIHVHNLAIHLRKMGHEVSIVTNALTNG-------KEGELQKYGIDLIKVPGLIKDG 70
GG+ +++ LA L + EV I T A T G L ++ +D GL K+
Sbjct: 86 GGMNVYIVELAQRLAAINIEVEIFTRATTAALPPAVELAPGVLVRH-VDAGPYEGLAKEE 144
Query: 71 INLSMIAKSSNSLVEYLKG-----FDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSV- 124
+ + A ++ +++ G +D+VH+ + + A + GA + H++
Sbjct: 145 LPAQLCA-FTHGVMQAWAGHRPGHYDLVHSHYWLS--GHVGWLAAQRWGAPLVHAMHTMA 201
Query: 125 EFENFSILNGFSKMSYSYF----KMYLGQVKVGIGVSKASVSFLRKFTNAP--IVEIPNG 178
+ +N ++ +G + + ++ ++ ++ + +R + P + + G
Sbjct: 202 KVKNANLADGDTPEPAARVIGETQIVAASDRLIANTAEEADELVRHYAADPDKVAVVHPG 261
Query: 179 VNIERFN--------GRGREWGTRNI--------------LYVGRLEPRKGVNYLISAMK 216
VN+ERF G G+ R L+ GR++P K + L+ A+
Sbjct: 262 VNLERFRPFPKGRVPGPGQHGNARAAARARLGLPQDALIPLFAGRIQPLKAPDILLRAVA 321
Query: 217 FVEGK---------LTIVGDGSMRKVLKMQ-----AKKLGVEDKVEFLGFISQEELILLY 262
+ + + +VG S + K + A +LG+ D V F + QE+L +
Sbjct: 322 VLLDERPELRSRIVVPVVGGPSGSGLAKPEGLQKLAARLGIADVVRFRPPVGQEQLADWF 381
Query: 263 KKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALAN 320
+ + V V+PS SE+FG+V +EA A+ PV+ +VGG+P + G G +V D A A
Sbjct: 382 RAASVLVMPSYSESFGLVAIEAQAAGTPVLAAAVGGLPVAVRDGHTGRLVHGHDPAAYAR 441
Query: 321 AINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY 360
+ N R+G + + + WD A T +Y
Sbjct: 442 VLRDFADNPDLTPRMGDAAARHAQS-FGWDSAAATTADVY 480
>pir||E69050 GlcNAc-phosphatidylinositol related biosynthetic protein -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621178|gb|AAB84644.1| (AE000802)
GlcNAc-phosphatidylinositol related biosynthetic protein
[Methanobacterium thermoautotrophicum]
Length = 384
Score = 80.4 bits (195), Expect = 3e-14
Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 189 REWGTRNILYVGRLEPRKGVNYLISAM-----KFVEGKLTIVGDGSMRKVLKMQAKKLGV 243
R+ T +I V RL K + LI A+ KF + + I+G G + + L+ A++L V
Sbjct: 199 RKTSTPSIACVSRLVEYKRIQDLIRAVSVIREKFPDIRCRIIGTGPLEERLRGLARELAV 258
Query: 244 EDKVEFLGFISQE-ELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEI 302
ED VEF+GF+ + +++ + +S VF LPS+ E FGIV++EAM P + + + E
Sbjct: 259 EDNVEFMGFVEKHADVLEVIAESWVFCLPSVVEGFGIVVVEAMGCGTPFVAARIPPVMES 318
Query: 303 IGD-AGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERL 359
+ G+ P + + LA + +LS+ + +RL V R YS D + + ER+
Sbjct: 319 SQEKGGLFFEPGNWRDLAEKLELLLSSGELHERLSSEAAD-VFRDYSADSIGRKLERV 375
>pir||B70610 hypothetical protein Rv1212c - Mycobacterium tuberculosis (strain
H37RV) >gi|1929086|emb|CAB07814.1| (Z93777) hypothetical
protein Rv1212c [Mycobacterium tuberculosis]
Length = 387
Score = 80.0 bits (194), Expect = 4e-14
Identities = 60/189 (31%), Positives = 94/189 (48%), Gaps = 32/189 (16%)
Query: 197 LYVGRLEPRKGVNYLISAMKFVEGKLTIV-----------GDGSMRKVLKMQAKKLGVED 245
++VGR+ +KGV +L++A + +V D V ++ + GV
Sbjct: 203 VFVGRITRQKGVVHLVTAAHRFRSDVQLVLCAGAADTPEVADEVRVAVAELARNRTGV-- 260
Query: 246 KVEFLGFISQEELIL-----LYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIP 300
F Q+ L + + + VFV PS+ E GIV LEAMA V+ + VGGIP
Sbjct: 261 ------FWIQDRLTIGQLREILSAATVFVCPSVYEPLGIVNLEAMACATAVVASDVGGIP 314
Query: 301 EIIGD--AGIIVPPRDSKA------LANAINAILSNQKTAKRLGKLGRKRVERLYSWDVV 352
E++ D G +V A LA A+NA++++ TA+R G GR+R + +SW +
Sbjct: 315 EVVADGITGSLVHYDADDATGYQARLAEAVNALVADPATAERYGHAGRQRCIQEFSWAYI 374
Query: 353 AERTERLYR 361
AE+T +YR
Sbjct: 375 AEQTLDIYR 383
>pir||H70548 hypothetical protein Rv0557 - Mycobacterium tuberculosis (strain
H37RV) >gi|2114019|emb|CAB08968.1| (Z95558) hypothetical
protein Rv0557 [Mycobacterium tuberculosis]
>gi|3719234|gb|AAC63250.1| (AF061562)
alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol
monomannoside transferase [Mycobacterium tuberculosis]
Length = 378
Score = 80.0 bits (194), Expect = 4e-14
Identities = 96/390 (24%), Positives = 165/390 (41%), Gaps = 36/390 (9%)
Query: 1 MESLKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKE-GELQKYGID 59
M +++A+V++ + P++ GV+ V + HLR+ GHE ++ G++ E G+
Sbjct: 1 MCGVRVAIVAESFLPQVNGVSNSVVKVLEHLRRTGHEALVIAPDTPPGEDRAERLHDGVR 60
Query: 60 LIKVPGLIKDGINLSMIAKSSNSLVEYLKGF--DVVHAQHAFTPLSLKSIPAGNKVGALT 117
+ +VP + + + + ++ L+GF DVVH L + A ++G T
Sbjct: 61 VHRVPSRMFPKVTTLPLGVPTFRMLRALRGFDPDVVHLASP-ALLGYGGLHAARRLGVPT 119
Query: 118 LVTNHSVEFENFSILNGF---SKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVE 174
V + + F+ G ++ ++++F+ + S A++ L +
Sbjct: 120 -VAVYQTDVPGFASSYGIPMTARAAWAWFRHLHRLADRTLAPSTATMESLIAQGIPRVHR 178
Query: 175 IPNGVNIERFNGRG------REW---GTRNILYVGRLEPRKGVNYLISAMKFVEGKLTIV 225
GV+++RF R W G + +VGRL P K V+ L +L IV
Sbjct: 179 WARGVDVQRFAPSARNEVLRRRWSPDGKPIVGFVGRLAPEKHVDRLTGLAASGAVRLVIV 238
Query: 226 GDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAM 285
GDG R A+ F G +EL Y +VFV E F V+ EA+
Sbjct: 239 GDGIDR------ARLQSAMPTAVFTGARYGKELAEAYASMDVFVHSGEHETFCQVVQEAL 292
Query: 286 ASEVPVIGTSVGGIPEIIGD--AGIIVPPRD-SKALANAINAILSNQK---TAKRLGKLG 339
AS +PVI GG ++I G+++P + L +A+ ++ ++ A R LG
Sbjct: 293 ASGLPVIAPDAGGPRDLITPHRTGLLLPVGEFEHRLPDAVAHLVHERQRYALAARRSVLG 352
Query: 340 RKRVERLYSWDVVAERTERLYRGELGDSDT 369
R SW VV + Y G T
Sbjct: 353 R-------SWPVVCDELLGHYEAVRGRRTT 375
>gb|AAG19109.1| (AE005009) Vng0598c [Halobacterium sp. NRC-1]
Length = 330
Score = 79.2 bits (192), Expect = 7e-14
Identities = 72/261 (27%), Positives = 112/261 (42%), Gaps = 21/261 (8%)
Query: 89 GFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHS--VEFENF----SILNGFSKMSYSY 142
G DVVHA F L L ++ + A + T H+ E+ + ++ + S Y
Sbjct: 43 GADVVHAHTPFG-LGLAAVRLARRNDAPLVATYHTPTAEYAEYVGPDAVTGAVRRASERY 101
Query: 143 FKMYLGQVKVGIGVSKASVSFLRKF-TNAPIVEIPNGVNIERFN---------GRGREWG 192
+ +L + + + S+ + +R + P+ +PNGV+ +RF
Sbjct: 102 ERWFLSRADLVLTPSERTRREVRALGVDTPVEAMPNGVDTDRFQPTDPTAFLAAHDLPAD 161
Query: 193 TRNILYVGRLEPRKGVNYLISAMKFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGF 252
I Y GR K + L++A V+ + GDG R L+ +A GV+ + FLGF
Sbjct: 162 EPLIGYTGRHGYEKRLGDLLAAAAGVDATVVFGGDGPARGDLEAEADARGVDAR--FLGF 219
Query: 253 ISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIV 310
+ +EE+ Y +VF PS E G+V LEA A PV G G + E I G G
Sbjct: 220 LDREEMPAFYSALDVFAFPSPIETEGLVALEANACGTPVAGVDAGALSETIIDGTTGYHY 279
Query: 311 PPRDSKALANAINAILSNQKT 331
D AI L ++ T
Sbjct: 280 DAGDIPGFRRAIRRALDDRDT 300
>dbj|BAB18471.1| (AB033991) BtrM [Bacillus circulans]
Length = 389
Score = 79.2 bits (192), Expect = 7e-14
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 7/159 (4%)
Query: 192 GTRNILYVGRLEPRKGVNYLISAMKFVEGKL-----TIVGDGSMRKVLKMQAKKLGVEDK 246
G + +L++GR+ KG + +S K + K+ + GDG R+ ++ Q K ++++
Sbjct: 204 GKKTVLFLGRIAHEKGWSTFVSVAKELADKIGDLQFIVCGDGPQREAMEEQIKAANLQNQ 263
Query: 247 VEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII--G 304
GFIS + + +++F+LPS E FG L+EA + VP+I T+ GG +I G
Sbjct: 264 FRITGFISHKFVSCYLHHAQLFLLPSHHEEFGGSLIEAAIAGVPIISTNNGGPADIFTHG 323
Query: 305 DAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRV 343
+ I+ P D +A+ IL+N A+ L R V
Sbjct: 324 ETAILKDPGDVSGIADEAYKILTNDSVAESLRLHSRPEV 362
>pir||E69727 biosynthesis of teichuronic acid tuaC - Bacillus subtilis
>gi|2454558|gb|AAB94864.1| (AF015609) unknown [Bacillus
subtilis] >gi|2636085|emb|CAB15576.1| (Z99122) alternate
gene name: yvhC [Bacillus subtilis]
Length = 389
Score = 78.8 bits (191), Expect = 9e-14
Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 40/253 (15%)
Query: 91 DVVHAQHAFTPLSLKSIPAGNKVGALT-------LVTNHSVEFENFSILNGFSKMSYSYF 143
D++HA A +P+G ++ ++T H + ++ +SK ++ F
Sbjct: 110 DLIHAHFA--------MPSGGAAAVVSESAQIPYVLTLHG---SDVNVYPHYSKGAFKAF 158
Query: 144 KMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGVNIERFNGR-----------GREWG 192
K +G V + VS +K + +P G+ + RF G G
Sbjct: 159 KRAVGSASVVLAVSHKLQEEAKKLSGFDSSVLPIGIQLSRFQGNEETKEEIRKRLGLPLD 218
Query: 193 TRNILYVGRLEPRKGVNYLISAMKFVEG--KLTIVGDGSMRKVLKMQAKKLGVEDKVEFL 250
R +YVGRL KG+ L A++ ++ K VGDG + L + +
Sbjct: 219 QRLAVYVGRLVREKGIFELSEAIESLQDSPKAVFVGDGPAKSTLTQKGHIV--------T 270
Query: 251 GFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIG-DAGII 309
G + ++ +++FVLPS SE V++EA+A VPVI T VGG+ + G ++
Sbjct: 271 GQVPNHQVRDYLLAADLFVLPSYSEGMPTVVIEALALRVPVICTDVGGVSSLFGKHQHLL 330
Query: 310 VPPRDSKALANAI 322
+ P+ ++ALA AI
Sbjct: 331 IKPKSAQALAEAI 343
>pir||E81824 alpha 1,2 N-acetylglucosamine transferase NMA1959 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7380591|emb|CAB85179.1| (AL162757) alpha 1,2
N-acetylglucosamine transferase [Neisseria meningitidis
Z2491]
Length = 354
Score = 78.8 bits (191), Expect = 9e-14
Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 14/193 (7%)
Query: 175 IPNGVNIERFNGRGREWGTR--NILYVGRLEPRKGVNYLISAM-----KFVEGKLTIVGD 227
+ NG++ RF + +R + Y GR+ P KG+ LI A K+ + +L + GD
Sbjct: 159 VHNGIDTGRFPPPQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGD 218
Query: 228 GSMRKV--LKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSL-SEAFGIVLLEA 284
G + LK G E V F GF E+L Y++S+V VLPSL EAFG+ L EA
Sbjct: 219 GHPDYMCRLKRDVSASGAEPFVSFEGFT--EKLASFYRQSDVVVLPSLVPEAFGLSLCEA 276
Query: 285 MASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKR 342
M VI ++G EII +GI++ ++LA+ I ++ N +T L G +
Sbjct: 277 MYCRTAVISNTLGAQKEIIEHHQSGILLDRLTPESLADEIERLVLNPETKNALATAGHQC 336
Query: 343 VERLYSWDVVAER 355
V ++ + A++
Sbjct: 337 VANRFTINHTADK 349
>dbj|BAB03209.1| (AB046360) putative glycosyltransferase [Actinobacillus
actinomycetemcomitans]
Length = 390
Score = 78.4 bits (190), Expect = 1e-13
Identities = 53/167 (31%), Positives = 89/167 (52%), Gaps = 8/167 (4%)
Query: 196 ILYVGRLEPRKGVNYLISAMKFV------EGKLTIVGD-GSMRKVLKMQAKKLGVEDKVE 248
IL V LEPRK + L+ A K + E L +VGD G L AK+L + ++
Sbjct: 216 ILSVCTLEPRKNLLRLVEAYKLLPESMKEEYPLVLVGDQGWKNSELFNSAKELFDKKQLI 275
Query: 249 FLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGI 308
+IS + + +Y + +F PSL E FG+ ++EAMAS VI ++ G + E+ GD+ +
Sbjct: 276 MTKYISDDLVKKIYSSAAIFAYPSLYEGFGLPIVEAMASGTAVITSNYGAMAEVAGDSAV 335
Query: 309 IVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAER 355
+V P ++ L +AI +L++ K G R +++SW+ ++
Sbjct: 336 LVNPHSTEELKDAIINLLTDIKFRNYFIDRGLNRA-KIFSWNNTVDK 381
>sp|P46915|CTSA_BACSU SPORE COAT PROTEIN SA >gi|7427927|pir||A70004 probable
hexosyltransferase (EC 2.4.1.-) ytxN - Bacillus subtilis
>gi|1197085|dbj|BAA06633.1| (D31847) orfX [Bacillus
subtilis] >gi|2293141|gb|AAC00219.1| (AF008220)
similarity with probable lipopolysaccharide
N-acetylglucosaminyltransferase from S. typhimurium
[Bacillus subtilis] >gi|2635575|emb|CAB15069.1| (Z99119)
alternate gene name: ytbA~similar to lipopolysaccharide
N-acetylglucosaminyltransferase [Bacillus subtilis]
Length = 377
Score = 78.0 bits (189), Expect = 2e-13
Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 21/187 (11%)
Query: 192 GTRNILYVGRLEPRKGVNYLISA------------MKFVEGKLTIVGDGSMRKVLKMQAK 239
G + +L+VGRL KG + L+ A M F+ K GD + +K
Sbjct: 190 GKKIVLFVGRLSKVKGPHILLQALPDIIEEHPDVMMVFIGSKW--FGDNELNNYVK-HLH 246
Query: 240 KLGV--EDKVEFLGFISQEELILLYKKSEVFVLPSL-SEAFGIVLLEAMASEVPVIGTSV 296
LG +D V F+ F+ +++ LY S+VFV S E V EAMA+ +P+I ++
Sbjct: 247 TLGAMQKDHVTFIQFVKPKDIPRLYTMSDVFVCSSQWQEPLARVHYEAMAAGLPIITSNR 306
Query: 297 GGIPEII--GDAGIIVPPRDS-KALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVA 353
GG PE+I G G I+ ++ K A IN +LS+ + +RLGK R+ E + W VA
Sbjct: 307 GGNPEVIEEGKNGYIIHDFENPKQYAERINDLLSSSEKRERLGKYSRREAESNFGWQRVA 366
Query: 354 ERTERLY 360
E +Y
Sbjct: 367 ENLLSVY 373
>pir||H83019 probable glycosyl transferase PA5004 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9951290|gb|AAG08389.1|AE004913_4 (AE004913) probable
glycosyl transferase [Pseudomonas aeruginosa]
Length = 378
Score = 77.6 bits (188), Expect = 2e-13
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 9/168 (5%)
Query: 199 VGRLEPRKGVNYLISAMKFV------EGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGF 252
VGRL P K L+ L I+G G + + LK A +LG+ ++V FLG
Sbjct: 201 VGRLHPDKDQATLLRGFAAALPRLPQNSLLAILGSGRLEEQLKDLACELGIGERVLFLGQ 260
Query: 253 ISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGIIVPP 312
+ EE +K + F L S E FG+VLLEAM + VP+I T+ GG E++ GI+ P
Sbjct: 261 V--EEARRYFKAFDAFALSSDHEPFGMVLLEAMVAGVPLIATACGGAREVVEGVGILFPL 318
Query: 313 RDSKALANAINAILS-NQKTAKRLGKLGRKRVERLYSWDVVAERTERL 359
D ALA + + + +++ + +L +R+E +S V RL
Sbjct: 319 GDETALAEGLTHLAALDRRQREACARLMLERLETRFSDAAVRREFWRL 366
>emb|CAB63280.1| (AJ251713) mannosyltransferase-like protein [Yersinia pestis]
Length = 337
Score = 77.3 bits (187), Expect = 3e-13
Identities = 67/249 (26%), Positives = 120/249 (47%), Gaps = 12/249 (4%)
Query: 118 LVTNHSVEFENFSILNGFSKMSYSYFK-MYLGQVKVGIGVSKASVSFLRKFTNAP---IV 173
+ T H +E F +NG +K +S+ K + + I VS+ + L+ + + P I
Sbjct: 92 VTTVHDFTYEKF--VNGPAKWVHSWQKNRAVNNSDLIICVSENTAKDLQMYCSVPSNKIR 149
Query: 174 EIPNGVNIERFNGRGREWGTRNILYVGRLEPRKGVNYLISAM-KFVEGKLTIVGDGSMRK 232
I NGV+ + +G + T +++VG K + + A+ K +L++VG G+
Sbjct: 150 VIYNGVSDKYHYIKGVKITTNKVIFVGARGGYKNFDIAVKAISKTPHLELSVVGGGAFTS 209
Query: 233 VLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVI 292
++ + + LG +S E L Y + + PS E FGI +LEAM++ PVI
Sbjct: 210 K-ELSLLNHYLPGRYHGLGRLSDEALNEAYNSAYALLYPSSYEGFGIPILEAMSAGCPVI 268
Query: 293 GTSVGGIPEIIGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVV 352
+V IPE+ GDA I+V + ++ +L+ + +L G K+ + +SWD
Sbjct: 269 SVNVSSIPEVAGDAAILV---QKPTIDELVDGLLAVESERSKLIGYGMKQAAK-FSWDKC 324
Query: 353 AERTERLYR 361
+ T +Y+
Sbjct: 325 YQETLDVYK 333
>pir||S70682 glycosyltransferase homolog - Bordetella pertussis
>gi|992981|emb|CAA62255.1| (X90711) gene referred to as
bplH in Mol. Microbiol. 19:37-52(1996) [Bordetella
pertussis] >gi|2959341|emb|CAA12124.1| (AJ224769) wlbH
[Bordetella bronchiseptica] >gi|3451508|emb|CAA07664.1|
(AJ007747) putative GlcNAc transferase [Bordetella
bronchiseptica] >gi|1589228|prf||2210367K bplH gene
[Bordetella pertussis]
Length = 390
Score = 76.9 bits (186), Expect = 4e-13
Identities = 65/225 (28%), Positives = 103/225 (44%), Gaps = 27/225 (12%)
Query: 164 LRKFTNAPIVEIPNGVNIERFNGRGREW-----GTRNILYVGRLEPRKGVNYLISAMKFV 218
+R T PI P G++ F G I V LE G++ LI A +
Sbjct: 159 MRGLTRRPIFVTPFGIDEALFQPAQSVQAPAADGPIVIGTVKALETHYGIDTLIQAFALL 218
Query: 219 EGKLT-------------IVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKS 265
L I G GS + L+ QA+ + ++VEF G I E+ +
Sbjct: 219 RQALAASQPGMAERLVLRIYGAGSQLQRLRAQAQAAHIANQVEFKGRIPHAEVPEALRAL 278
Query: 266 EVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAIN 323
+V+V S ++FG+ +LEA + +PV+ ++ G E++ G G IV D+ A A+ +
Sbjct: 279 DVYVALSRMDSFGVAILEACSCALPVVVSNADGPAEVVVDGKTGYIVAREDAHAAADRLQ 338
Query: 324 AILSNQKTAKRLGKLGRKRVERLYSW----DVVAE---RTERLYR 361
++ N + +RLG GR RV Y+W D++ + T RLYR
Sbjct: 339 ELVLNPELRQRLGAAGRARVLSEYTWSKSLDMMLDAYTETARLYR 383
>emb|CAB63299.1| (AJ251712) mannosyltransferase-like protein [Yersinia
pseudotuberculosis]
Length = 337
Score = 76.9 bits (186), Expect = 4e-13
Identities = 67/249 (26%), Positives = 120/249 (47%), Gaps = 12/249 (4%)
Query: 118 LVTNHSVEFENFSILNGFSKMSYSYFK-MYLGQVKVGIGVSKASVSFLRKFTNAP---IV 173
+ T H +E F +NG +K +S+ K + + I VS+ + L+ + + P I
Sbjct: 92 VTTVHDFTYEKF--VNGPAKWVHSWQKNRAVNNSDLIICVSENTAKDLQMYCSVPSNKIR 149
Query: 174 EIPNGVNIERFNGRGREWGTRNILYVGRLEPRKGVNYLISAM-KFVEGKLTIVGDGSMRK 232
I NGV+ + +G + T +++VG K + + A+ K +L++VG G+
Sbjct: 150 VIYNGVSDKYHYIKGVKITTNKVIFVGARGGYKNFDIAVKAISKTPHLELSVVGGGAFTS 209
Query: 233 VLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVI 292
++ + + LG +S E L Y + + PS E FGI +LEAM++ PVI
Sbjct: 210 K-ELSLLNHYLPGRYHGLGRLSDEALNEAYNSAYALLYPSSYEGFGIPILEAMSAGCPVI 268
Query: 293 GTSVGGIPEIIGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVV 352
+V IPE+ GDA I+V + ++ +L+ + +L G K+ + +SWD
Sbjct: 269 SVNVSSIPEVAGDAAILV---QKPTVDELVDGLLAVESERSKLIGYGMKQAAK-FSWDKC 324
Query: 353 AERTERLYR 361
+ T +Y+
Sbjct: 325 YQETLDVYK 333
>dbj|BAB07431.1| (AP001519) unknown conserved protein [Bacillus halodurans]
Length = 395
Score = 76.9 bits (186), Expect = 4e-13
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 23/210 (10%)
Query: 172 IVEIPNGVNIERFNG----------RGREWGTRN--ILYVGRLEPRKGVNYLISAMKFVE 219
I++IPNGV+ +RF R E IL+ G + RKG+ L+ A++ V+
Sbjct: 178 IIKIPNGVDDKRFAPVDCTTKRAIRRNLELPVERVLILFAGAINKRKGIVDLLDAVQKVK 237
Query: 220 GK--LTIVGDGSMRKVLKMQAK-----KLGVEDKVEFLGFISQEELILLYKKSEVFVLPS 272
K ++V G + + + + + K + K+ + G ++ E + S++FVLPS
Sbjct: 238 TKNHYSLVICGPILEDINFEERVQEINKTNKKIKIIYKGVVTDIEKYMA--ASDIFVLPS 295
Query: 273 LSEAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQK 330
SE VLLEA ++ + +I T +GG +I+ G G ++P S LA + ++ N+
Sbjct: 296 YSEGLPNVLLEAGSTGLALITTDIGGSRDIVIDGRNGFVIPTNSSDLLAKKMELLIDNED 355
Query: 331 TAKRLGKLGRKRVERLYSWDVVAERTERLY 360
+R+G R +E +S + VA+ E LY
Sbjct: 356 IRERMGDETRSVIENNFSLEFVAKEYEYLY 385
>pir||T44785 glycosyltransferase homolog [imported] - Bordetella parapertussis
>gi|2959339|emb|CAA12123.1| (AJ224768) putative GlcNAc
transferase [Bordetella parapertussis]
Length = 390
Score = 76.5 bits (185), Expect = 5e-13
Identities = 56/185 (30%), Positives = 91/185 (48%), Gaps = 22/185 (11%)
Query: 199 VGRLEPRKGVNYLISAMKFVEGKLT-------------IVGDGSMRKVLKMQAKKLGVED 245
V LE G++ LI A + L I G GS + L+ QA+ + +
Sbjct: 199 VKALETHYGIDTLIQAFALLRQALAASQPGMAERLVLRIYGAGSQLQRLRAQAQAAHIAN 258
Query: 246 KVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII-- 303
+VEF G I E+ + +V+V S ++FG+ +LEA + +PV+ ++ G E++
Sbjct: 259 QVEFKGRIPHAEVPEALRALDVYVALSRMDSFGVAILEACSCALPVVVSNADGPAEVVVD 318
Query: 304 GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSW----DVVAE---RT 356
G G IV D+ A A+ + ++ N + +RLG GR RV Y+W D++ + T
Sbjct: 319 GKTGYIVAREDAHAAADRLQELVLNPELRQRLGAAGRARVLSEYTWSKSLDMMLDAYTET 378
Query: 357 ERLYR 361
RLYR
Sbjct: 379 ARLYR 383
>dbj|BAB07382.1| (AP001519) lipopolysaccharide biosynthesis [Bacillus halodurans]
Length = 373
Score = 76.5 bits (185), Expect = 5e-13
Identities = 53/174 (30%), Positives = 94/174 (53%), Gaps = 13/174 (7%)
Query: 196 ILYVGRLEPRKGVNYLISAMKFV----EGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLG 251
I+ GRL P+K L+ A V + KL ++G+G +++ L+ +A +L V D+V FLG
Sbjct: 197 IITAGRLVPQKDQRTLLQAFAKVNEQTKSKLVLLGEGPLKEELQQEAARLEVADRVHFLG 256
Query: 252 FISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII---GDAGI 308
F Q + +K ++VFVL S+ E F V+ EA+A+ PV+ T+ PE + G G
Sbjct: 257 F--QSNPYVYFKHADVFVLSSIHEGFSHVIAEALATGTPVVSTNCKSGPEEVLDKGKYGF 314
Query: 309 IVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDV--VAERTERLY 360
+ D +A+ I +L+ + ++ L + +ER+ +D + ++ E L+
Sbjct: 315 LCEVGDVDEMASKIQHVLT--LSPEQRASLIERGLERVQDFDAKQIVKQYETLF 366
>sp|Q46638|AMSK_ERWAM AMYLOVORAN BIOSYNTHESIS PROTEIN AMSK >gi|1073271|pir||S52148 amsK
protein - Erwinia amylovora >gi|600437|emb|CAA54889.1|
(X77921) amsK [Erwinia amylovora]
Length = 407
Score = 76.1 bits (184), Expect = 6e-13
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 19/201 (9%)
Query: 178 GVNIERFNGRGRE--WGTRNILYVGRLEPRKGVNYLISAMKFVEGK-----LTIVGDGSM 230
G+ E+FN + R+ IL V RL +KG+ I A + ++ + TI+G G +
Sbjct: 206 GIEPEKFNLKLRDALHQPLRILSVARLTEKKGLGVAIEACRILKQQGGCFEYTIIGYGDL 265
Query: 231 RKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFG------IVLLEA 284
LK +ED V+ +GF QEE+ ++++F+LPSL+ A G + L+EA
Sbjct: 266 EAQLKTAIADGYLEDCVKLVGFKPQEEIKRYLDEADIFLLPSLTAADGDMEGIPVALMEA 325
Query: 285 MASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKR 342
MA +PV+ + GIPE+I +G + P D++ALA + + + + R +
Sbjct: 326 MAVGLPVVSSEHSGIPELIEHNVSGWLAPEGDAQALAAILLRLSQGEADVVPVVLAARAK 385
Query: 343 VERLYSWDV----VAERTERL 359
VE ++ + +AE ERL
Sbjct: 386 VETEFNQHIAYRQLAEILERL 406
>emb|CAB75373.1| (AL139298) putative transferase [Streptomyces coelicolor A3(2)]
Length = 942
Score = 76.1 bits (184), Expect = 6e-13
Identities = 63/198 (31%), Positives = 102/198 (50%), Gaps = 14/198 (7%)
Query: 172 IVEIPNGVNIERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFV-----EGKLTIVG 226
+ IPN + E F R G + I+ RL P K V++ I A +L I G
Sbjct: 189 LAAIPNAIP-EGFRPRSSLTG-KTIVMPRRLVPDKQVDHAIQAFAKALPDHPGWRLRIFG 246
Query: 227 DGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLS-EAFGIVLLEAM 285
DG L+ + LG+ D VE LG + + + ++ + +LPS EAF +VLLEA
Sbjct: 247 DGPQMSRLRNLIQGLGLHDSVELLG--PSQHMTEEWARASLTILPSQDGEAFPLVLLEAF 304
Query: 286 ASEVPVIGTS-VGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKR 342
A+ VP + V G EII G+ G++VPP D ++LA AI+ ++ ++ + G+ +
Sbjct: 305 AAGVPAVAYDIVTGPAEIIRHGEDGLLVPPNDVESLAEAISRLMGDEALLRSYGEKAHEG 364
Query: 343 VERLYSWDVVAERTERLY 360
R ++ DV+ ++ E L+
Sbjct: 365 STR-FAADVIVKQWEELF 381
>pir||C81053 alpha-1,2-N-acetylglucosamine transferase NMB1705 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226960|gb|AAF42053.1| (AE002520)
alpha-1,2-N-acetylglucosamine transferase [Neisseria
meningitidis MC58]
Length = 354
Score = 76.1 bits (184), Expect = 6e-13
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 175 IPNGVNIERFNGRGREWGTR--NILYVGRLEPRKGVNYLISAM-----KFVEGKLTIVGD 227
+ NG++ RF + +R + Y GR+ P KG+ LI A K+ + +L + GD
Sbjct: 159 VHNGIDTGRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGD 218
Query: 228 GSMRKV--LKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSL-SEAFGIVLLEA 284
G + LK G E V F GF E+L Y++S+V VLPSL EAFG+ L EA
Sbjct: 219 GHPDYMCRLKRDVSASGAEPFVSFEGFT--EKLASFYRQSDVVVLPSLVPEAFGLSLCEA 276
Query: 285 MASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKR 342
M VI ++G EI+ +GI++ ++LA+ I ++ N +T L +
Sbjct: 277 MYCRTAVISNTLGAQKEIVEHHQSGILLDRLTPESLADEIERLVLNPETKNALATAAHQC 336
Query: 343 VERLYSWDVVAER 355
V ++ + A++
Sbjct: 337 VAARFTINHTADK 349
>gb|AAC45156.1| (U39810) LPS glycosyltransferase IcsA [Neisseria meningitidis]
Length = 333
Score = 75.3 bits (182), Expect = 1e-12
Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 14/193 (7%)
Query: 175 IPNGVNIERFNGRGREWGTR--NILYVGRLEPRKGVNYLISAM-----KFVEGKLTIVGD 227
+ NG++ RF + R + Y GR+ P KG+ LI A K+ + +L + GD
Sbjct: 138 VHNGIDTGRFPPSQEKPDRRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGD 197
Query: 228 GSMRKV--LKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSL-SEAFGIVLLEA 284
G + LK G E V F GF E+L Y++S+V VLPSL EAFG+ L EA
Sbjct: 198 GHPDYMCRLKRDVSASGAEPFVSFEGFT--EKLASFYRQSDVVVLPSLVPEAFGLSLCEA 255
Query: 285 MASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKR 342
M VI ++G EI+ +GI++ ++LA+ I ++ N +T L +
Sbjct: 256 MYCRTAVISNTLGAQKEIVEHHQSGILLDRLTPESLADEIERLVLNPETKNALATAAHQC 315
Query: 343 VERLYSWDVVAER 355
V ++ + A++
Sbjct: 316 VAARFTINHTADK 328
>pir||S74778 hypothetical protein slr1077 - Synechocystis sp. (strain PCC 6803)
>gi|1652003|dbj|BAA16929.1| (D90901) hypothetical
protein [Synechocystis sp.]
Length = 386
Score = 75.3 bits (182), Expect = 1e-12
Identities = 90/366 (24%), Positives = 162/366 (43%), Gaps = 25/366 (6%)
Query: 15 PKIGGVAIHVHNLAIHLRKMGH-EVSIVTNALTNGKEGELQKYGIDLIKVPGLIKDG--- 70
P+ GG +I V NL L EV++++ LT+ KV +I +
Sbjct: 12 PEAGGPSITVTNLTDALSHQNFTEVTLLSQCLTDSSVVAPAPNS----KVNRIIVNSSHR 67
Query: 71 INLSMIAKSSNSLVEYLKGF--DVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFEN 128
I LS+ +N L L + D++H + P+S + + LV + E
Sbjct: 68 IALSLGLPLNNLLRSRLSSYPSDIIHGHGLWHPISYWRSQTAKQYN-IPLVIHPRGMLEP 126
Query: 129 FSI-LNGFSKMS--YSYFKMYLGQVKVGIGVSKASVSFLRKF-TNAPIVEIPNGV---NI 181
+++ F K + Y L + ++ + LR F PI PNG+ +
Sbjct: 127 WALNYRKFKKRIALWLYQNRDLQRAQILFATANQEAQSLRHFGLRQPIAITPNGILFPTL 186
Query: 182 ERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFV---EGKLTIVG--DGSMRKVLKM 236
E R L++ R+ P+KG+ LI A V + +L I G + + R ++
Sbjct: 187 ESQASPPESSRHRTALFLSRIHPKKGLMNLIQAWHQVSPPDWQLLIAGPNENNHRAEVQA 246
Query: 237 QAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSV 296
Q K+ +E ++ L + E LY+++++F+LP+ SE FG+V+ EA++ +PVI T+
Sbjct: 247 QIKQHQLEQTIKILDSVEGEAKANLYRQADLFILPTFSENFGVVVAEALSYGIPVITTTG 306
Query: 297 GGIPEI-IGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAER 355
++ G V P + A + + + + +G+ GR V + Y W+ +A+
Sbjct: 307 TPWQDLQTYRCGWWVEPTVATIADALQQATILHPQELRTMGERGRAYV-KCYDWNAIAQD 365
Query: 356 TERLYR 361
T +YR
Sbjct: 366 TLAVYR 371
>sp|Q9R9N1|LPSE_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS GLYCOSYL TRANSFERASE LPSE
>gi|6224912|gb|AAF06009.1|AF193023_3 (AF193023) LpsE
[Sinorhizobium meliloti]
Length = 340
Score = 75.3 bits (182), Expect = 1e-12
Identities = 81/335 (24%), Positives = 137/335 (40%), Gaps = 41/335 (12%)
Query: 48 GKEGELQKYGIDLIKVPGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSI 107
GK+G +++ + L+ L + G+ + I + ++G + H F LSL I
Sbjct: 9 GKDGGAERFFVHLVNA--LAERGVEQTAIIRPGRGWRRDIEGAAKIRESH-FRNLSLDRI 65
Query: 108 PAGNKVGALTLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVG-IGVSKASVSFLRK 166
L L H E +L ++ + Y G K+ +G +S+ R
Sbjct: 66 -------LLPLKVKHMARREKPDVLMAWAPRASELMPNYKGAFKISRLGDYPTRLSYFRN 118
Query: 167 FTNAPIVEIPNGVN-------------IERFNGRGREWGTRN-----------ILYVGRL 202
T+ + P I F G GR ++ +GR
Sbjct: 119 -TDCIVCNTPGIAERVSDLGWKREIRVISNFTGTGRVVAVDRAKLDTPADAPVVMSMGRF 177
Query: 203 EPRKGVNYLISAMKFVEGK-LTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILL 261
RKG + LI A+ + G L ++GDG R L A LGV +V F G+ Q++
Sbjct: 178 VERKGFHTLIEAVARLPGVYLWLLGDGEERDNLHKLATDLGVSGRVRFAGW--QDDTRPF 235
Query: 262 YKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALA 319
+VFV+ S E G V+LE+ A PV+ T G + G+ G++V D++ A
Sbjct: 236 LAAVDVFVMSSSHEPLGNVILESWAQGTPVVSTRSEGPQWFMRDGENGLMVDIGDAEGFA 295
Query: 320 NAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAE 354
AI I+++ RL + G + + +S + + +
Sbjct: 296 RAIEQIVADNSLRTRLAERGHETLVGQFSREAITD 330
>emb|CAC12195.1| (AL445066) N-acetylglucosaminyl-phosphatidylinositol biosynthetic
protein related protein [Thermoplasma acidophilum]
Length = 381
Score = 74.9 bits (181), Expect = 1e-12
Identities = 76/302 (25%), Positives = 142/302 (46%), Gaps = 23/302 (7%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGE----LQKYGID 59
++I +D Y+P GV++++ + L GHEV I + G E + KY
Sbjct: 1 MRILYFTDTYYPTPDGVSVYLKEVKQKLEDEGHEVMIFS---VTGDSREHNVYVPKYTAP 57
Query: 60 LIKVPGLIKDGINLSMIA-KSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTL 118
+ P + + +S I + +E+ D+VH +AF S+ + A ++G +
Sbjct: 58 FLPYP---QYRVPVSFIPFRVFRRALEFNP--DIVHLHNAFYMSSVGYLVA-RRIGVPPV 111
Query: 119 VTNHS-VEFENFSILNGFSKMSYSYFKMY----LGQVKVGIGVSKASVSFLRKFTNAPIV 173
T H+ V SI F +++ + Y + ++ + S +L+ +V
Sbjct: 112 ATFHTDVSRMKESINMPFKNLAFDLGERYSLFLYRKCRMVMAPSATVEEYLKIRGVKNVV 171
Query: 174 EIPNGVNIERFNGRGREWGTRNILYVGRLEPRKGVNYLIS---AMKFVEGKLTIVGDGSM 230
+P V+ +++ + G R ILY+GR+ KG+ ++ AMK + + I G G
Sbjct: 172 TLPLFVDTDKYRYVPADSGERYILYLGRITVDKGIYRVLDLAEAMKSEDVRFKIAGVGPE 231
Query: 231 RKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVP 290
++ K G+++ VE LG++ + + L + +FV PS ++ FGI + EA+AS VP
Sbjct: 232 LDRIRRIVKYHGMKN-VEILGYVDDQRKMDLMANASLFVYPSSADTFGISVFEALASGVP 290
Query: 291 VI 292
V+
Sbjct: 291 VM 292
>gb|AAC38771.1| (AF010182) glycosyltransferase WbpY [Pseudomonas aeruginosa]
Length = 371
Score = 74.5 bits (180), Expect = 2e-12
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 197 LYVGRLEPRKGVNYLISAMKFVEGK------LTIVG-DGSMRKVLKMQAKKLGVEDKVEF 249
L VG LEPRK ++ + A + L IVG G + L + ++ V
Sbjct: 196 LCVGTLEPRKNLSLALRAHGQLPAAVRQRFPLMIVGMPGWESRSLDDELRQALASGTVRL 255
Query: 250 LGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGII 309
LG++ E + L + V PS+ E FG+ +LEAMAS PV+ T + +PE+ G+AG
Sbjct: 256 LGYLPDERVAELMSGARALVFPSIYEGFGLPVLEAMASGTPVLLTRLSAMPEVAGEAGSY 315
Query: 310 VPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYR 361
+ P D+ L++ + + + + + G +R E+ +SW A T YR
Sbjct: 316 IDPDDANGLSDMLVRMTEDTVYWECCREAGLRRAEQ-FSWKRCANLTAAAYR 366
>pir||T35150 probable glycosyl transferase - Streptomyces coelicolor (fragment)
>gi|3334782|emb|CAA19930.1| (AL031107) putative glycosyl
transferase [Streptomyces coelicolor A3(2)]
Length = 368
Score = 74.5 bits (180), Expect = 2e-12
Identities = 51/176 (28%), Positives = 82/176 (45%), Gaps = 13/176 (7%)
Query: 192 GTRNILYVGRLEPRKGVNYLISAMKFVEG---KLTIVG----DGSMRKVLKMQAKKLGVE 244
G ++ V + PRKG + L+ A+ V VG D L+ + G++
Sbjct: 176 GVSKLVCVAAVTPRKGQHRLVEALAAVSDLPWSCVCVGGLAQDPEYVDRLRSLIARHGLQ 235
Query: 245 DKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIG 304
+++ G + +L Y +++ VL S +E +G+ + EA+A +PV+ T VGG+PE +G
Sbjct: 236 ERLVLAGPRAGADLDATYAAADLMVLTSYAETYGMAVTEALARGIPVLATDVGGLPEAVG 295
Query: 305 DA------GIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAE 354
A GI+VPP D ALA + +RL R R L W A+
Sbjct: 296 RAPDGGVPGILVPPEDPGALAAELRGWFGEPDVRRRLKAAARGRRAALNGWASTAQ 351
>pir||B82964 glycosyltransferase WbpY PA5448 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9951779|gb|AAG08833.1|AE004958_3
(AE004958) glycosyltransferase WbpY [Pseudomonas
aeruginosa]
Length = 375
Score = 74.5 bits (180), Expect = 2e-12
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 197 LYVGRLEPRKGVNYLISAMKFVEGK------LTIVG-DGSMRKVLKMQAKKLGVEDKVEF 249
L VG LEPRK ++ + A + L IVG G + L + ++ V
Sbjct: 200 LCVGTLEPRKNLSLALRAHGQLPAAVRQRFPLMIVGMPGWESRSLDDELRQALASGTVRL 259
Query: 250 LGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGII 309
LG++ E + L + V PS+ E FG+ +LEAMAS PV+ T + +PE+ G+AG
Sbjct: 260 LGYLPDERVAELMSGARALVFPSIYEGFGLPVLEAMASGTPVLLTRLSAMPEVAGEAGSY 319
Query: 310 VPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYR 361
+ P D+ L++ + + + + + G +R E+ +SW A T YR
Sbjct: 320 IDPDDANGLSDMLVRMTEDTVYWECCREAGLRRAEQ-FSWKRCANLTAAAYR 370
>dbj|BAB07099.1| (AP001518) glycosyl transferase (lipopolysaccharide biosynthesis)
[Bacillus halodurans]
Length = 452
Score = 74.1 bits (179), Expect = 2e-12
Identities = 77/322 (23%), Positives = 148/322 (45%), Gaps = 32/322 (9%)
Query: 64 PGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHS 123
P +IK ++ + SS L ++ +D++HAQ + +L + + T+ +S
Sbjct: 75 PYIIKQELDRYVFELSSALLP--IETYDLIHAQDVVSTRALARVKPAHIPLVTTIHGLYS 132
Query: 124 VEFENFSILNGFSKMSYSYFKMYLGQVKVG-IGVSKASV--SFLRK-------FTNAPIV 173
E N ++ + S+ Y L Q +G + K V +++R+ ++
Sbjct: 133 EERFNRGVIQTKNDHSWKYS---LAQEYIGALSADKVIVLTNWMRQRFQDQLNISSHHFE 189
Query: 174 EIPNGVNIERFNGRGR--------EWGTRNILYVGRLEPRKGVNYLISAMKFVEGK---- 221
IPNG+ IE F + E IL RL K LI A++ ++ +
Sbjct: 190 TIPNGMFIEEFTNKLTNKTQVHIPESKKFTILCPARLVAEKDHRTLIDAVQLLKKEREDF 249
Query: 222 -LTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIV 280
+ GDG +R+ L+ ++ V+D FLG ++ ++ L +S++ VLPSL E
Sbjct: 250 ICLLAGDGELREELEGYCREKEVQDVCLFLG--NRNDIPELMNRSDLVVLPSLQENLPFT 307
Query: 281 LLEAMASEVPVIGTSVGGIPEIIGD--AGIIVPPRDSKALANAINAILSNQKTAKRLGKL 338
++EA + P+I ++ GG+PE++ D G + RDS+ LA + ++ + + + LG
Sbjct: 308 VMEAQVAGKPLIVSNAGGLPEMVHDGVTGRLFKKRDSRQLAFILKELMDHDEDRQLLGNN 367
Query: 339 GRKRVERLYSWDVVAERTERLY 360
+ +S + E+ + +Y
Sbjct: 368 AKDWGRSQWSANTFCEKIKTVY 389
>gb|AAC44373.1| (U37258) GDP-mannose:cellobiosyl-diphosphopolyprenol
alpha-mannosyltransferse [Acetobacter xylinus]
Length = 393
Score = 74.1 bits (179), Expect = 2e-12
Identities = 91/386 (23%), Positives = 156/386 (39%), Gaps = 37/386 (9%)
Query: 2 ESLKIALVSDWYFPKIGGVAIHVHNLAIHLR-KMGHEVSIVTNALTNGKEGEL-QKYGID 59
E+LK+ + + P +GG+ + NLA R ++G + ++T G+ G+L + +D
Sbjct: 9 ETLKVLHICRQFSPSVGGLEDSLLNLARSQRQRLGIDAEVLTLDTVFGRPGKLPHRDVVD 68
Query: 60 LIKVPGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFT----------PLSLKSIPA 109
I V L G +A ++ ++ GFD++H HA PL K++ A
Sbjct: 69 GIPVTRLAWRGSTKYPLAPQ---VLRHIGGFDLLHV-HAIDFFFDFLAWTWPLHRKTMIA 124
Query: 110 GNKVGALTLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTN 169
G ++ F + S +Y K + S + R
Sbjct: 125 STHGGFFHTGALRRIKEIWFRTITPISVRAY----------KKIVACSYSDADLFRHVAA 174
Query: 170 APIVEIPNGVNIERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFVEG-----KLTI 224
++ I NG+N RF R IL GR K + L + + + +
Sbjct: 175 GRLITIENGINQTRFRDAASRTPNRTILAFGRFAVHKRLKLLFQLVALLRAYNSGWNIIV 234
Query: 225 VGDGSMRKV--LKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLL 282
G S L+ QA+ G+ED + + S EL L ++ F S E FG+ +
Sbjct: 235 AGQDSNLTADDLRAQARACGIEDSLRIVSGPSDAELRGLMGEASFFGCLSAHEGFGLAAV 294
Query: 283 EAMASEVPVIGTSVGGIPEII--GDAGIIVPPRD-SKALANAINAILSNQKTAKRLGKLG 339
EAM++ + I +++ ++ G AG++V P + + A + + +TA L +
Sbjct: 295 EAMSAGLVPILSNITPFARLMQQGAAGVMVNPDNLAPGAREAEDMAAALPETADAL-RAR 353
Query: 340 RKRVERLYSWDVVAERTERLYRGELG 365
V Y W VA RLY+ LG
Sbjct: 354 NMDVASRYDWHSVAHEYARLYQQVLG 379
>pir||T44332 hypothetical protein wblE [imported] - Vibrio cholerae
>gi|3721686|dbj|BAA33636.1| (AB012957) probable glucosyl
transferase [Vibrio cholerae]
Length = 359
Score = 74.1 bits (179), Expect = 2e-12
Identities = 68/240 (28%), Positives = 116/240 (48%), Gaps = 15/240 (6%)
Query: 71 INLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSV--EFEN 128
+N+ + K+ L+E G +VHA H PL ++ N + + T HS +
Sbjct: 64 LNIFKLRKTIKMLIEK-HGELIVHA-HLTWPLFYVALGLFN-LNVKLVYTEHSTFNKRRK 120
Query: 129 FSILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGVNIERFNGRG 188
+ L F ++ YS + +G + VSK+ +L + IV I NG F R
Sbjct: 121 YPFLKFFERLVYSRYSRIVG---ISNSVSKSIEVWLGSSFLSRIVTINNGARFYSFKCRH 177
Query: 189 REWGTRNI--LYVGRLEPRKGVNYLISAMKFVE---GKLTIVGDGSMRKVLKMQAKKLGV 243
++ I L VG L+P KG + I ++ + K TIVG G LK + V
Sbjct: 178 NLELSKKIKLLSVGSLKPLKGFDKTIKSLSKITQYIDKYTIVGTGPSYDTLKEISLDNHV 237
Query: 244 EDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEII 303
+ V+F+G+ EL Y ++++ ++PS E FG+ +E M++ +PVI ++V G+ E++
Sbjct: 238 DHLVDFVGW--SNELEKFYHEADILLIPSHWEGFGLSAVEGMSTGLPVIASNVDGLNEVV 295
>sp|Q48453|YC07_KLEPN HYPOTHETICAL 41.2 KD PROTEIN IN CPS REGION (ORF7)
>gi|747666|dbj|BAA04778.1| (D21242) ORF7 [Klebsiella
pneumoniae]
Length = 358
Score = 73.7 bits (178), Expect = 3e-12
Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 40/284 (14%)
Query: 68 KDGINLSMIAKSSNSLVEYLK--GFDVVHAQHAFTPLSLKSIPAG---NKVGALTLVTNH 122
+ G N+S ++ +++ LK FDV+H +F ++++ A NK + T H
Sbjct: 51 RTGRNISSLSSLFLVIIKTLKYNKFDVIHLHSSFAGFIVRALFAFKLINKKKYKVIYTPH 110
Query: 123 SVEFENFSILNGFSKMSYSYFKMYLGQ----------------VKVGIGVSKASVSFLRK 166
F + K Y Y + L + V GI +K V +
Sbjct: 111 CFSF--IMDTKKWKKKVYIYIERILAKQTDCIIANSYYEYKCAVDAGISKNKIKVVY--- 165
Query: 167 FTNAPIVEIPNGVN-IERFNGRGREWGTRNILYVGRLEPRKGVNYLISAMKFVE-GKLT- 223
NA ++ + I++ N + NIL+VGR + +KG +YL++ +K + K T
Sbjct: 166 --NAVSLDGQEKLERIKKCNENEVQKEKINILFVGRFDKQKGYDYLLNVIKVADVSKYTF 223
Query: 224 -IVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLL 282
I+GD S+ V + K + V + G++ +EL + +++V ++PS E+FG+V +
Sbjct: 224 NIIGD-SVHDVFEKIEK-----ENVVYYGWVDNKELPAYFCENDVLLMPSRWESFGLVAV 277
Query: 283 EAMASEVPVIGTSVGGIPEIIGD--AGIIVPPRDSKALANAINA 324
EA VPVI +V +PE+I D G++V D+ + +++
Sbjct: 278 EAQLYGVPVIANNVASLPEVISDGLTGMLVNFEDANKVVEIMDS 321
>pir||A75597 mannosyltransferase - Deinococcus radiodurans (strain R1)
>gi|6460564|gb|AAF12270.1|AE001862_96 (AE001862)
mannosyltransferase [Deinococcus radiodurans]
Length = 343
Score = 73.4 bits (177), Expect = 4e-12
Identities = 53/173 (30%), Positives = 85/173 (48%), Gaps = 11/173 (6%)
Query: 194 RNILYVGRLEPRKGVNYLISAMKFVEGK-------LTIVGDGSMRKVLKMQAKKLGVEDK 246
R L VG L+ RK ++ K E L I+G R+ + K V +
Sbjct: 165 RYFLMVGALQERKNFRRVLEVWKTWERTGRPDDLGLVIIGS---RESIFSSFKLDYVPEG 221
Query: 247 VEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDA 306
V+F+ +S E L LY + F+ PSL E FGI +LEAMA PVI ++V +PE+ A
Sbjct: 222 VQFMDKVSDEILPKLYSSAVAFLFPSLYEGFGIPILEAMACGTPVITSNVTSMPEVADKA 281
Query: 307 GIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERL 359
+++ P ++ A+ I S+ + L G +R ++ +SW+ A +T +
Sbjct: 282 ALLINPELHVSILQAMQTISSDGQLRDELRVAGLERAQQ-FSWERTALQTREV 333
>pir||D83107 conserved hypothetical protein PA4311 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9950534|gb|AAG07699.1|AE004847_6 (AE004847)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 371
Score = 73.4 bits (177), Expect = 4e-12
Identities = 62/241 (25%), Positives = 104/241 (42%), Gaps = 24/241 (9%)
Query: 141 SYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGVNIERFNGRGREWG-------- 192
+Y G + S+ L + A + P GV++ F+ R+ G
Sbjct: 135 NYVSKLYGHFDRVLAPSRVMAEKLMRLGVADVHVQPLGVDLVTFHPSNRDPGLRQELGLD 194
Query: 193 --TRNILYVGRLEPRKGVNYLISAMKFVEG--KLTIVGDGSMRKVLKMQAKKLGVEDKVE 248
TR +++ GR K + L+ A++ + L +VG +V + V D
Sbjct: 195 EETRLLVFAGRGSREKNLPVLLDAIQRLGDGYHLLLVGSNMPTRV----PRNTSVVDH-- 248
Query: 249 FLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGD-AG 307
F E+ L S+ + E FG+V LEAMAS +PV+ G + EI+ + G
Sbjct: 249 ---FCDSREVARLLASSDALLHAGDQETFGLVALEAMASGIPVVAVRAGALAEIVPERCG 305
Query: 308 IIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGELGDS 367
++ P + A+A A+ + S+ + G+ R+ VER ++WD V Y LGDS
Sbjct: 306 VLCAPNNGDAMACAVRELFSHDVELR--GQRARRHVERQHAWDAVVAGLLLHYHAVLGDS 363
Query: 368 D 368
+
Sbjct: 364 E 364
>gb|AAD43836.1|AF076290_6 (AF076290) putative mannosyltransferase [Brucella melitensis]
Length = 374
Score = 73.0 bits (176), Expect = 5e-12
Identities = 89/377 (23%), Positives = 155/377 (40%), Gaps = 44/377 (11%)
Query: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNA--LTNGKEGELQKYGIDLI 61
+KI V Y P GG V LA +GH V+IV+ + + + E D
Sbjct: 1 MKIIHVIGSYDPAKGGPQAVVVRLAAAQASLGHRVTIVSYSDDAVSRRAAEATAMIPDFD 60
Query: 62 KVPGLI---KDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTL 118
KV L+ D ++N++ ++G D VH L I N + A L
Sbjct: 61 KVQTLLLPMPDIYETFTGGHTANAVTALIRGADFVH---------LHGIWETNLLRASML 111
Query: 119 VTNHSVEFENF--SILNGFSKMSYSYFKMYLGQVKVGIGVSKASVSFLRKF-TNAPIVEI 175
+ + +L+G + + +++ + +R AP + I
Sbjct: 112 CRRFHIPYCVCCCGMLDGAAFIH---------------ALNRDEIELMRPLGLKAPSLVI 156
Query: 176 PNGVNIERFNGRGREW----GTRNILYVGRLEPRKGVNYLISAM-----KFVEGKLTIVG 226
PNGV + + R IL++ RL +K ++ L A F + L + G
Sbjct: 157 PNGVFLNEVEVGDMDVPGLPARRFILFLSRLHYKKRLDILADAYCRIAPHFRDVDLVVAG 216
Query: 227 -DGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAM 285
DG + + + G++ +V G + I K++ F LPS E F + + EA+
Sbjct: 217 PDGGAEDAFRRKIAEYGLQHRVHMPGGLYGLAKIAALKRAACFCLPSRQEGFSVAITEAL 276
Query: 286 ASEVPVIGTSVGGIPEIIGDAGI-IVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVE 344
A PV+ T PE +G+AG +V +++ + +A+ +L + A ++G G K V
Sbjct: 277 ACGAPVVITDACHFPE-VGEAGAGVVCALNAEMVGDALAGVLEDLDKAAQMGASGAKLVR 335
Query: 345 RLYSWDVVAERTERLYR 361
Y+W +A +T Y+
Sbjct: 336 ENYTWPRIARQTIEAYQ 352
>pir||T46662 alpha 1,2 N-acetylglucosamine transferase [imported] - Neisseria
meningitidis >gi|1209581|gb|AAC44648.1| (U58765) alpha
1,2 N-acetylglucosamine transferase [Neisseria
meningitidis] >gi|1588748|prf||2209336A rfaK gene
[Neisseria meningitidis]
Length = 354
Score = 72.2 bits (174), Expect = 9e-12
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 14/193 (7%)
Query: 175 IPNGVNIERFNGRGREWGTR--NILYVGRLEPRKGVNYLISAM-----KFVEGKLTIVGD 227
I NG++ +RF + +R + Y GR+ P KG+ LI A K+ + +L + G
Sbjct: 159 IHNGIDTDRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGH 218
Query: 228 GSMRKV--LKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSL-SEAFGIVLLEA 284
G + LK G E V F GF E + Y++S+V VLPSL EAFG+ L EA
Sbjct: 219 GHPDYMCRLKRDVSASGAEPFVSFEGFT--ENIASFYRQSDVVVLPSLVPEAFGLSLCEA 276
Query: 285 MASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKR 342
M VI ++G EI+ +GI++ ++LA+ I ++ N + L +
Sbjct: 277 MYCRTAVISNTLGAQKEIVEHHQSGILLDRLTPESLADEIERLVLNPEAKNALATAAHQC 336
Query: 343 VERLYSWDVVAER 355
V ++ + A++
Sbjct: 337 VAARFTINHTADK 349
>sp|Q11152|Y486_MYCTU HYPOTHETICAL 50.5 KDA PROTEIN RV0486 >gi|7476374|pir||A70744
probable hexosyltransferase (EC 2.4.1.-) Rv0486
[similarity] - Mycobacterium tuberculosis (strain H37RV)
>gi|1449284|emb|CAB00947.1| (Z77162) hypothetical
protein Rv0486 [Mycobacterium tuberculosis]
Length = 480
Score = 72.2 bits (174), Expect = 9e-12
Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 13/184 (7%)
Query: 194 RNILYVGRLEPRKGVNYLISAMKFVEGKLTIVGDGSMRKVLKMQ------AKKLGVEDKV 247
R + +VGR++P K + ++ A + G IV G L A +LG+ +V
Sbjct: 266 RVVAFVGRIQPLKAPDIVLRAAAKLPGVRIIVAGGPSGSGLASPDGLVRLADELGISARV 325
Query: 248 EFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGD-- 305
FL S +L L++ +++ +PS SE+FG+V +EA A PV+ +VGG+P + D
Sbjct: 326 TFLPPQSHTDLATLFRAADLVAVPSYSESFGLVAVEAQACGTPVVAAAVGGLPVAVRDGI 385
Query: 306 AGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVER---LYSWDVVAERTERLYRG 362
G +V + A+AI+ +L + A G++ + R +SW+ + YR
Sbjct: 386 TGTLVSGHEVGQWADAIDHLL--RLCAGPRGRVMSRAAARHAATFSWENTTDALLASYRR 443
Query: 363 ELGD 366
+G+
Sbjct: 444 AIGE 447
>pir||C70036 capsular polysaccharide biosynthesis homolog yveN - Bacillus
subtilis >gi|1495282|emb|CAA96471.1| (Z71928)
hypothetical protein [Bacillus subtilis]
>gi|1945693|emb|CAB08026.1| (Z94043) hypothetical
protein [Bacillus subtilis] >gi|2635947|emb|CAB15439.1|
(Z99121) similar to capsular polysaccharide biosynthesis
[Bacillus subtilis]
Length = 381
Score = 72.2 bits (174), Expect = 9e-12
Identities = 67/200 (33%), Positives = 90/200 (44%), Gaps = 23/200 (11%)
Query: 178 GVNIERFNG-------RGRE-WGTRN----ILYVGRLEPRKGVNYLISAMKFVEGK---- 221
GVN ERF R RE G R ++Y L K LI A ++ K
Sbjct: 170 GVNTERFRPVSPIEQQRLREKHGFREDDFILVYPAELNLNKNQKQLIEAAALLKEKIPSL 229
Query: 222 -LTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQ-EELILLYKKSEVFVLPSLSEAFGI 279
L G+G+M + A+KLG V F GF S ELI L ++V V S+ E G+
Sbjct: 230 RLVFAGEGAMEHTYQTLAEKLGASAHVCFYGFCSDIHELIQL---ADVSVASSIREGLGM 286
Query: 280 VLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGK 337
+LE MA+E P I T G EII G+ G ++ DS A A I + + ++LG+
Sbjct: 287 NVLEGMAAEQPAIATDNRGHREIIRDGENGFLIKIGDSAAFARRIEQLYHKPELCRKLGQ 346
Query: 338 LGRKRVERLYSWDVVAERTE 357
GRK R V E +
Sbjct: 347 EGRKTALRFSEARTVEEMAD 366
>sp|P71243|WCAL_ECOLI PUTATIVE COLANIC ACID BIOSYNTHESIS GLYCOSYL TRANSFERASE WCAL
>gi|7466272|pir||C64970 hypothetical protein b2044 -
Escherichia coli (strain K-12)
>gi|1736747|dbj|BAA15898.1| (D90842) ORF_ID:o352#3;
similar to [PIR Accession Number S15296] [Escherichia
coli] >gi|1788357|gb|AAC75105.1| (AE000295) putative
colanic acid biosynthesis glycosyl transferase
[Escherichia coli K12]
Length = 406
Score = 72.2 bits (174), Expect = 9e-12
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 18/192 (9%)
Query: 178 GVNIERFNGRGREWGTR--NILYVGRLEPRKGVNYLISAMKFVEG-----KLTIVGDGSM 230
GV++ RF+ R + I+ V RL +KG++ I A + ++ + I+G G
Sbjct: 205 GVDMTRFSPRPVKAPATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW 264
Query: 231 RKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFG------IVLLEA 284
+ L+ ++ +ED VE GF E+ + ++VF+LPS++ A G + L+EA
Sbjct: 265 ERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEA 324
Query: 285 MASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAI--LSNQKTAKRLGKLGR 340
MA +PV+ T GIPE++ +G +VP D++ALA + A L + A + K R
Sbjct: 325 MAVGIPVVSTLHSGIPELVEADKSGWLVPENDARALAQRLAAFSQLDTDELAP-VVKRAR 383
Query: 341 KRVERLYSWDVV 352
++VE ++ V+
Sbjct: 384 EKVEHDFNQQVI 395
>pir||C72354 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981140|gb|AAD35704.1|AE001736_2 (AE001736)
conserved hypothetical protein [Thermotoga maritima]
Length = 397
Score = 71.8 bits (173), Expect = 1e-11
Identities = 84/298 (28%), Positives = 125/298 (41%), Gaps = 43/298 (14%)
Query: 36 HEVSIVTNALTNGKEGELQKYGIDLIK-VPGLIKDGINLSMIAKSSNSLVEYLKGFDVVH 94
+ VSI N L K G L+ Y L K +I++ NL+ +D++H
Sbjct: 74 YPVSIEINLLRLIKYGLLRNYFTVLCKEYKKMIEEAFNLNE--------------YDLIH 119
Query: 95 AQHAFT-PLSLKSIPAGNKVGALTLVTNHSVEFENFSILNGFSKMSYSYFKMYLGQVKVG 153
A ++ P L + K +VT H S +N F + L
Sbjct: 120 AHGMYSVPAGLTAKILAEKYRKPFIVTLHG------SDVNLFMPHRKEIYVSILESASAT 173
Query: 154 IGVSKASVSFLRK--FTNAPIVEIPNGVNIERFNGRGREW----------GTRNILYVGR 201
I VSKA + + F+ V IPNG + F +E G + + +VG
Sbjct: 174 IFVSKALLEKAKSLGFSGKNAVVIPNGYDETIFKPMDKEAVRKELGIHREGYKYVGFVGN 233
Query: 202 LEPRKGVNYL-----ISAMKFVEGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQE 256
L P K + L + A + E IVGDG +RK ++ + K L + F G + Q+
Sbjct: 234 LIPIKRADKLGEIFHLIAKEIPETFFIIVGDGPLRKKIEKETKGLNII----FTGRLPQK 289
Query: 257 ELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGIIVPPRD 314
++ +V VLPS +E + V+LEA A VIG+S GIPE IG +V D
Sbjct: 290 DVAKYMNAMDVMVLPSRNEGWPCVILEAQACGTCVIGSSNRGIPEAIGFPEYVVEEGD 347
>emb|CAB58332.1| (AL121855) putative transferase [Streptomyces coelicolor A3(2)]
Length = 413
Score = 71.8 bits (173), Expect = 1e-11
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 195 NILYVGRLEPRKGVNYLISAMKFVEGK------LTIVGDGSMRKVLKMQAKKLGVEDKVE 248
++LY+GRL KGV L+ A + L + G G + + + A D V
Sbjct: 216 HLLYLGRLAEAKGVRLLMEAWDELAADGGVGVPLVVAGTGPLEREVTAWAAG---RDDVR 272
Query: 249 FLGFISQEELILLYKKSEVFVLPSL-SEAFGIVLLEAMASEVPVIGTSVGGIPEIIGD-- 305
++G E+ +S V PS EAFG+V++EAMA+ VP + G E++ D
Sbjct: 273 YVGLYDPEQCRRALARSVAVVAPSTWLEAFGLVVVEAMAAGVPAVAAGHGAFAELVDDGV 332
Query: 306 AGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYR 361
G++ P ++ +LA+ I I + + + +G+ R+R E+ +S V ER YR
Sbjct: 333 TGLLHRPGEAASLASRIRRIAAEPEGNQEMGRAARRRYEQGFSPAVGLERLLEGYR 388
>sp|P54490|YQGM_BACSU HYPOTHETICAL 40.8 KDA PROTEIN IN SODA-COMGA INTERGENIC REGION
>gi|7474699|pir||G69956 conserved hypothetical protein
yqgM - Bacillus subtilis >gi|1303860|dbj|BAA12516.1|
(D84432) YqgM [Bacillus subtilis]
>gi|2634924|emb|CAB14421.1| (Z99116) similar to
hypothetical proteins [Bacillus subtilis]
Length = 359
Score = 71.4 bits (172), Expect = 2e-11
Identities = 74/344 (21%), Positives = 149/344 (42%), Gaps = 22/344 (6%)
Query: 27 LAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPGLIKDGINLSMIAKSSNSLVEY 86
L +HL ++ ++ N G+L Y K I D N +M+ ++ +
Sbjct: 18 LGVHLNRLISYLNPHINITVFTPSGQLFSYA----KFEDYIADA-NFTMV----RHVLSH 68
Query: 87 LKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFENFSILNGFSKMSYSYF--K 144
K FD++HA T + + + ++G T H +E E + + Y +
Sbjct: 69 NKRFDLIHAHDDTTAPAAQYLK--QRLGLPLAATIHGLESERKKVCRE-APHPYRLMTER 125
Query: 145 MYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGVNIERFNGR-GREWGTRNILYVGRLE 203
+ + I +S L K + I IP+ ++E G+ R R + GR
Sbjct: 126 LLIESADALIVLSTFMKRSLDKAAHKKITVIPSPASMEEEKGKIPRSMNRRFLFSYGRFV 185
Query: 204 PRKGVNYLISAMKFVEGK-----LTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEEL 258
P KG++ L+ ++ + L + G+G + A ++D++ FL F++++++
Sbjct: 186 PEKGLSQLLKVFAILKQRQPDLYLVLAGEGPSLSCYEKLAAAYNLKDRIMFLPFLNRKDI 245
Query: 259 ILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPE--IIGDAGIIVPPRDSK 316
L E+ V PS E FG+ E+M V + + GG + + II +
Sbjct: 246 RTLLSHCEMAVFPSSYEPFGLAAQESMEQGVLTVVSQSGGFCDYAVHDKTAIIADFTLVQ 305
Query: 317 ALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLY 360
A+ +++ L +++ A+R+ + GR++V +L+ ++ +LY
Sbjct: 306 EAADLLDSFLKDREKARRIKEAGRQQVFKLHHPRLIMSSYLQLY 349
>pir||E70346 mannosyltransferase B - Aquifex aeolicus >gi|2983150|gb|AAC06752.1|
(AE000693) mannosyltransferase B [Aquifex aeolicus]
Length = 374
Score = 71.4 bits (172), Expect = 2e-11
Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 32/271 (11%)
Query: 117 TLVTNHSVE-FENFSILNGFSKMSYS--YFKMYLGQVKVGIGVSKASVSFLRKFTNAPIV 173
T+VT H + F + F K+ +F + K I +SK + + L KF +
Sbjct: 112 TVVTVHDLRPFTEYWDRGEFKKLIIKKLFFDRAIKYSKAIISISKTTKNDLLKFYS---- 167
Query: 174 EIPNGVNI--ERFNGRGREWGTRN------ILYVGRLEPRKGVNYLISAMKFVEGKLT-- 223
E+ N + + E F+ + T+ +LYVG+ + K ++ L+ A ++ K+
Sbjct: 168 EVQNKIVVIYETFSINKKSTETKQNIVGDYLLYVGQFKKHKNLDRLLKAFSMIKNKIKCK 227
Query: 224 IVGDGSMRKV-LKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLL 282
+V G + + K L + D+V + S ELI LYK ++ F+ PSL E FG+ L
Sbjct: 228 LVIAGKKDNIDIYNSIKSLNLGDRVVVIKNPSDGELINLYKNAKFFISPSLYEGFGLPPL 287
Query: 283 EAMASEVPVIGTSVGGIPEIIGDAGIIVPPRDSKALANAINAILSN-----QKTA----K 333
E++ +VPVI + + EI D I P + +A I LSN QKT K
Sbjct: 288 ESLNYDVPVILSDIPVFREIYEDIAIYFNPFSEENIAEKIIFALSNYNSIKQKTVSEKDK 347
Query: 334 RLGKLGRKRVERLYSWDVVAERTERLYRGEL 364
K ++++ + Y E ++ +GEL
Sbjct: 348 IFNKFEKRKIVKQY-----LELFNKIIKGEL 373
>pir||B71691 capm protein (capM1) RP344 - Rickettsia prowazekii
>gi|3860904|emb|CAA14804.1| (AJ235271) CAPM PROTEIN
(capM1) [Rickettsia prowazekii]
Length = 389
Score = 71.4 bits (172), Expect = 2e-11
Identities = 101/381 (26%), Positives = 166/381 (43%), Gaps = 48/381 (12%)
Query: 18 GGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKVPGLIKDGINLSMIA 77
GGV +A +L+ +GH I++ T KE L K I I++ K N +I
Sbjct: 25 GGVERGTIEVAKYLKILGHTPIIISAGGTLVKE--LDKEDILHIEMNSSSK---NPCIIV 79
Query: 78 KSSNSLVEYLKGF--DVVHAQHAFTPLSLKSIPAGNKVGALTLVTNHSVEFENFSILNGF 135
++ + E +K + D+VH + S S A A L T H V ++I N F
Sbjct: 80 NNAKLIAEIIKKYHVDIVHTRSRAPAWS--SYLATKWTNAKFLTTFHGV----YNIPNSF 133
Query: 136 SKMSYSYFKMYLGQVKVGIGVSKASVSFLRK---FTNAPIVEIPNGVNIERFNGRG---- 188
K Y+ + + + I VS +L K + IV I GVN + F+
Sbjct: 134 KK----YYNSIMLKGEKVIAVSNFVKQYLLKNYKVDESKIVVIERGVNCDYFDPANLTPE 189
Query: 189 ----------REWGTRNILYVGRLEPRKGVNYLISAMKFVEGK---LTIVGDGSMRKVLK 235
IL R+ KG L+ A+ ++ + +VGD S
Sbjct: 190 KLKKCSDKYDAPSNVPIILMPSRMTSWKGHLVLVEALSKLKHRDFYCLMVGDISRHPNFT 249
Query: 236 MQAKKL----GVEDKVEFLGFISQEELILLYKKSEVFVLPSLS-EAFGIVLLEAMASEVP 290
+ K+L +++K++ G + ++I LY S++ V S+ EAFG ++E A E
Sbjct: 250 NRVKELIATLKLQNKIQIFG--NDSDIISLYGISDIIVSASIEPEAFGRTIIEGQAMEKL 307
Query: 291 VIGTSVGGIPEIIGD--AGIIVPPRDSKALANAINAILS--NQKTAKRLGKLGRKRVERL 346
VI T++GG E I + G V P +++ALA I+ S TAK++ + R V
Sbjct: 308 VIATNLGGAVETINNNITGFHVEPNNAEALAQKIDYCFSILGTDTAKKIQEAARHTVIDN 367
Query: 347 YSWDVVAERTERLYRGELGDS 367
+S D++ + +Y+ L +S
Sbjct: 368 FSLDLMLRKNLEVYKEILKNS 388
>dbj|BAA25653.1| (AB005901) deduced glucosyltransferase [Streptomyces kasugaensis]
Length = 251
Score = 70.6 bits (170), Expect = 3e-11
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 25/222 (11%)
Query: 167 FTNAPIVEIPNGVNIERFNGRGR---EWGTRN--------ILYVGRLEPRKGVNYLISAM 215
FT+ I + G +++RF G W R+ L R PRK + ++A+
Sbjct: 30 FTDDDIHVVEFGTDLDRFRDDGAARARWRNRHGVADDETVFLVPARPVPRKCIEDAVAAL 89
Query: 216 KFVEGKL----------TIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKS 265
+ G+ T S + L+ A +LGV D+V + +S ++ +LY +
Sbjct: 90 AHLAGRHPRARLVLTTPTARTLDSYAEKLRALADELGVADRVIWEQGLSWHDMPMLYAGA 149
Query: 266 EVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGD--AGIIVPPRDSKALANAIN 323
+ VLPS E FGI L+E MA PVI ++V G E+I G + P RD +ALA +
Sbjct: 150 DAVVLPSSHEGFGIALVEGMAGRRPVITSNVEGHDEVIDHERTGFLYPARDVEALAGCMA 209
Query: 324 AILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERLYRGELG 365
++++ + L R +S VA ER Y G
Sbjct: 210 RVITSD--LENLVAAAHAEAVRPFSSTAVAAGHERAYEVACG 249
>pir||C71153 hypothetical protein PH0426 - Pyrococcus horikoshii
>gi|3256829|dbj|BAA29512.1| (AP000002) 403aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 403
Score = 70.6 bits (170), Expect = 3e-11
Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 29/255 (11%)
Query: 133 NGFSKMSYSYFKMYLGQV---KVGIGVSKASVSFLRKFTNAPIVEIPNGVNIERFNGRGR 189
NGF +S + Q+ ++ I VS SFL+K I+ N+
Sbjct: 149 NGFQSISDVFLLEKTAQLLREEISITVSN---SFLQKMFGGTIIWHTRDENVFNPKKYDP 205
Query: 190 EWGTRN---------ILYVGRLEPRKGVNYLISAMKFVEG-----KLTIVGDGSMRKVLK 235
E R+ +++ G P KG+ LI A+ E +LT+V G + +
Sbjct: 206 EESRRSFGIPEDKVVLMFFGTPRPHKGLEELIQAIYTTEELRNNQELTLVIGGIGKDLYS 265
Query: 236 MQAKKLGVE---DKVEFLGFISQEELILLYKKSEVFVLPSLSE--AFGIV---LLEAMAS 287
+ +LG + DKV F+G + EE S+++++P +FG + L +AMA
Sbjct: 266 QKIAQLGKKLLGDKVIFIGHVPFEETPKAVVASDIYIIPQKKTYASFGQLPAKLFDAMAM 325
Query: 288 EVPVIGTSVGGIPEIIGDAGIIVPPRD-SKALANAINAILSNQKTAKRLGKLGRKRVERL 346
+I T+V IP I+ GI++ K L+ I ++ N A++LG R+R +L
Sbjct: 326 ARAIISTNVSDIPRILDGVGIVISSETLEKNLSEEILYLVENLDEARKLGTKARRRFVKL 385
Query: 347 YSWDVVAERTERLYR 361
Y ++ + ++ ER+ R
Sbjct: 386 YGFNPMRKKLERILR 400
>gb|AAF23992.1| (AF035937) WbpU [Pseudomonas aeruginosa]
Length = 376
Score = 70.6 bits (170), Expect = 3e-11
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 12/195 (6%)
Query: 177 NGVNIERFNGRGREWGTRNILYVGRLEPRKGVNYLISA-----MKFVEGKLTIVGD---G 228
+GV++ ++ T + RL KGV + A + V +VGD G
Sbjct: 178 SGVDLTQYQPAPESPETPVVTLAARLLRDKGVLEFVEAANILRQRSVPAHFQLVGDLDPG 237
Query: 229 SMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASE 288
+ + + ++ E +E LG+ ++++ ++ +S + VLPS E VL+EA A
Sbjct: 238 NPTSIEPSELERWRSEGTIECLGY--RQDIASVFARSHIVVLPSYREGLPKVLVEASACG 295
Query: 289 VPVIGTSVGGIPEIIGD--AGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERL 346
V+ T V G + I G++VP RDS ALA+AI ++ + + K++G GR ER
Sbjct: 296 RAVVTTDVPGCRDAIQADVTGLLVPVRDSAALADAIQRLIESPELRKKMGAAGRALAERD 355
Query: 347 YSWDVVAERTERLYR 361
++ + + ++ +YR
Sbjct: 356 FAIESIVQQHLDIYR 370
>dbj|BAB06024.1| (AP001515) lipopolysaccharide N-acetylglucosaminyltransferase
[Bacillus halodurans]
Length = 502
Score = 70.6 bits (170), Expect = 3e-11
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 192 GTRNILYVGRLEPRKGVNYLISAM-----KFVEGKLTIVG------DGSMRKVLKMQAKK 240
G + IL+ GRL KG + L+ AM F L ++G DG V +++
Sbjct: 194 GKKVILFSGRLSANKGADVLVRAMHELGKSFSNVALVLMGSKWFSDDGVTDYVAYVRSLA 253
Query: 241 LGVEDKVEFLGFISQEELILLYKKSEVFVLPSL-SEAFGIVLLEAMASEVPVIGTSVGGI 299
V GF++ ++ Y +++FV PS E V EAMAS +P++ T+ GG
Sbjct: 254 NRSPIPVVTTGFVNPMDIHKWYAAADLFVCPSQWQEPLARVHYEAMASGLPIVTTARGGN 313
Query: 300 PEII--GDAGIIVPPRDSK-ALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERT 356
PE+I G++V ++ A A ++ +L++ + +G+ GR+ E YSWD V
Sbjct: 314 PEVIEQNKNGLVVEDVENPTAFAQELSKLLADPQLCLEMGRYGRQLAEEKYSWDRVVRDI 373
Query: 357 ERLY 360
E+++
Sbjct: 374 EQVW 377
>emb|CAB57276.1| (X77725) PIG-A [Homo sapiens]
Length = 248
Score = 69.9 bits (168), Expect = 5e-11
Identities = 49/179 (27%), Positives = 90/179 (49%), Gaps = 8/179 (4%)
Query: 190 EWGTRNILYVGRLEPRKGVNY-LISAM------KFVEGKLTIVGDGSMRKVLKMQAKKLG 242
E G + I+ RKG+ L+S + K+ + I G+G R +L+ ++
Sbjct: 62 ERGHKVIIVTHAYGNRKGIRIDLLSGIIPELCQKYPDLNFIIGGEGPKRIILEEVRERYQ 121
Query: 243 VEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIPEI 302
+ D+V LG + +++ + + +F+ SL+EAF + ++EA + + V+ T VGGIPE+
Sbjct: 122 LHDRVRLLGALEHKDVRNVLVQGHIFLNTSLTEAFCMAIVEAASCGLQVVSTRVGGIPEV 181
Query: 303 IGDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLG-RKRVERLYSWDVVAERTERLY 360
+ + II+ K+L + + K+ V+ Y+W VAERTE++Y
Sbjct: 182 LPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPAPENIHNIVKTFYTWRNVAERTEKVY 240
>pir||A82676 conserved hypothetical protein XF1470 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106494|gb|AAF84279.1|AE003977_2 (AE003977)
conserved hypothetical protein [Xylella fastidiosa]
Length = 376
Score = 69.5 bits (167), Expect = 6e-11
Identities = 44/144 (30%), Positives = 77/144 (52%), Gaps = 7/144 (4%)
Query: 222 LTIVGDGS-MRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIV 280
L I GDG + + L K L +E ++ LG+ + + L ++F L + EA G V
Sbjct: 226 LVIAGDGEPVMQHLLAHRKTLTLETQIHLLGY--RHDAPRLMSGFDIFALATQKEAAGTV 283
Query: 281 LLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKL 338
LEA + +P+I T VGG+PE++ G I+V P + AL NA++ +++N + +G+
Sbjct: 284 FLEAAQAGIPIIATRVGGVPEMLQEGTNAILVTPGNQTALTNALHTLVTNNQQRHSMGRA 343
Query: 339 GRKRVERLYSWDVV--AERTERLY 360
G + + + + A+ TE+ Y
Sbjct: 344 GWDWIRKSPVFSAIGHAKTTEQYY 367
>sp|O68547|LPCC_RHILV LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS MANNOSYLTRANSFERASE LPCC
>gi|2944086|gb|AAC05215.1| (AF050103) mannosyl
transferase [Rhizobium leguminosarum]
Length = 352
Score = 69.1 bits (166), Expect = 8e-11
Identities = 64/249 (25%), Positives = 108/249 (42%), Gaps = 29/249 (11%)
Query: 141 SYFKMYLGQVKVGIGVSKASVSFLRKFTNAPIVEIPNGVNIERFNGRGREW--------- 191
+Y K + ++ I S S SFL P I +GV++ F+
Sbjct: 109 AYTKWLIRRMDAVIATSDRSGSFLE----VPHTVIQHGVDLALFHPPEAAEDGIAATGLP 164
Query: 192 GTRNILYVGRLEPRKGVNYLISAM-----------KFVEGKLTIVGDGSMRKVLKMQAKK 240
G + GR+ +KG + + AM V G++T K LK
Sbjct: 165 GRHLVGCFGRVRHQKGTDLFVRAMIELLPQHTEWTAVVSGRVTAEHVAFADK-LKADVVA 223
Query: 241 LGVEDKVEFLGFISQEELILLYKKSEVFVLPSLSEAFGIVLLEAMASEVPVIGTSVGGIP 300
G+ D++ FLG + ++ + Y++ ++V PS +E FG+ LEAMAS V+ + G
Sbjct: 224 AGLSDRILFLGEVP--DIKIWYRRLTLYVAPSRNEGFGLTPLEAMASRTAVVASDAGAYA 281
Query: 301 EII--GDAGIIVPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTER 358
E+I G+ G +V D +AL AI +++ A G+ + V ++ + A
Sbjct: 282 ELIVTGETGSVVAASDGEALTRAIAPYIADPALAVAHGENALRHVRANFALEREASAIGA 341
Query: 359 LYRGELGDS 367
+Y LGD+
Sbjct: 342 VYNSLLGDN 350
>gb|AAC69662.1| (AF019745) WaaD [Escherichia coli]
Length = 380
Score = 69.1 bits (166), Expect = 8e-11
Identities = 61/230 (26%), Positives = 114/230 (49%), Gaps = 37/230 (16%)
Query: 163 FLRKF-----TNAPIVEIPNGVNIERFNGRGREWGTRN----------ILYVGRLEPRKG 207
+L+K+ NA I +PNG+++E + + TR+ I Y GR+ P KG
Sbjct: 149 YLKKYYQSYLANADIEIVPNGIDLETYQSNFQPI-TRSELNISPEEKIIFYAGRIVPDKG 207
Query: 208 VNYLISAMKFVEG-----KLTIVGD---------GSMRKVLKMQAKKLGVEDKVEFLGFI 253
+ L+ + + + KL ++GD G+ ++ ++ AK+L +D+ LG I
Sbjct: 208 ILLLMQSFEKLAAAHKNLKLVVIGDYTEMSKSDKGAYQRNVREIAKRL--KDRCIMLGSI 265
Query: 254 SQEELILLYKKSEVFVLPS-LSEAFGIVLLEAMASEVPVIGTSVGGIPEIIGDAGI---I 309
E++ Y +++ V+PS E F +V +EAM + PV+ ++ GG+ E + + +
Sbjct: 266 PPEKMHCYYPLADLVVIPSQFQEPFCMVAIEAMGAGKPVLVSTRGGMTEFVKENTTGFHL 325
Query: 310 VPPRDSKALANAINAILSNQKTAKRLGKLGRKRVERLYSWDVVAERTERL 359
P + ++++ I L+N + + K G+ V YSWD V +R E +
Sbjct: 326 KEPMTADSISSDILKTLANPELT-AVAKQGQDFVFEHYSWDGVTQRFEEV 374
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.138 0.387
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128605901
Number of Sequences: 2977
Number of extensions: 5246570
Number of successful extensions: 14884
Number of sequences better than 1.0e-10: 165
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 14576
Number of HSP's gapped (non-prelim): 190
length of query: 371
length of database: 189,106,746
effective HSP length: 58
effective length of query: 313
effective length of database: 154,394,500
effective search space: 48325478500
effective search space used: 48325478500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 166 (69.1 bits)