BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0830 (PAB0830) DE:proliferating-cell nucleolar antigen P120,
putative
(449 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75033 probable proliferating-cell nucleolar antigen p120 P... 911 0.0
pir||G71135 probable fmu protein - Pyrococcus horikoshii >gi|325... 804 0.0
pir||A72478 probable fmu protein APE2465 - Aeropyrum pernix (str... 296 3e-79
pir||G75137 sun protein (fmu protein) PAB2390 - Pyrococcus abyss... 204 2e-51
pir||C71102 probable fmu protein - Pyrococcus horikoshii >gi|325... 202 6e-51
dbj|BAB06226.1| (AP001515) unknown conserved protein [Bacillus h... 201 1e-50
pir||G75121 nucleolar protein PAB0523 - Pyrococcus abyssi (strai... 185 1e-45
pir||H71009 probable proliferating-cell nucleolar protein p120 -... 184 1e-45
gi|11499621 proliferating-cell nucleolar antigen P120, putative ... 183 3e-45
sp|P94464|SUN_BACSU SUN PROTEIN >gi|7429452|pir||E69878 RNA-bind... 183 4e-45
gi|11499905 fmu and fmv protein [Archaeoglobus fulgidus] >gi|744... 178 1e-43
sp|P72943|SUN_SYNY3 SUN PROTEIN (FMU PROTEIN) >gi|7429453|pir||S... 174 2e-42
pir||A75030 probable proliferating-cell nucleolar antigen p120 P... 173 5e-42
pir||B81093 fmu and fmv protein, probable NMB1351 [imported] - N... 170 2e-41
pir||F81848 SUN-family protein NMA1563 [imported] - Neisseria me... 170 3e-41
sp|P36929|SUN_ECOLI SUN PROTEIN (FMU PROTEIN) >gi|7445095|pir||D... 168 2e-40
pir||G71215 probable nucleolar protein - Pyrococcus horikoshii >... 168 2e-40
pir||A72245 sun protein - Thermotoga maritima (strain MSB8) >gi|... 166 5e-40
sp|Q60343|Y026_METJA HYPOTHETICAL PROTEIN MJ0026 >gi|2127710|pir... 163 3e-39
sp|P44788|SUN_HAEIN SUN PROTEIN (FMU PROTEIN) >gi|1074459|pir||F... 161 2e-38
dbj|BAB01410.1| (AP000375) contains similarity to SUN and FMU pr... 157 2e-37
pir||C72748 probable sun protein APE0514 - Aeropyrum pernix (str... 155 9e-37
pir||G82372 sun protein VC0044 [imported] - Vibrio cholerae (gro... 155 9e-37
dbj|BAB08657.1| (AB026659) nucleolar protein-like [Arabidopsis t... 155 9e-37
sp|P45679|SUN_COXBU SUN PROTEIN (FMU PROTEIN) 154 2e-36
pir||T40814 probable nucleolar protein-NOL1-NOP2-sun family - fi... 152 6e-36
gb|AAA58086.1| (U18997) we have one ORF, ECFMT has fmu and fmv [... 151 2e-35
gi|11498459 proliferating-cell nucleolar antigen P120, putative ... 146 3e-34
dbj|BAA31227.1| (D86411) Fmv [Vibrio alginolyticus] 146 3e-34
emb|CAA10711.1| (AJ132604) sunL protein [Lactococcus lactis] 146 3e-34
pir||B81236 16S RNA methyltransferase NMB0112 [imported] - Neiss... 144 2e-33
gb|AAK40591.1| Proliferating-cell nucleolar antigen p120 homolog... 144 2e-33
pir||G82009 SUN homolog NMA0162 [imported] - Neisseria meningiti... 143 4e-33
pir||G71030 probable nucleolar protein - Pyrococcus horikoshii >... 143 5e-33
emb|CAA54370.1| (X77091) fmv [Escherichia coli] 142 7e-33
gi|6324268 90-kDa protein, located in nucleolus, that is homolog... 142 9e-33
emb|CAA58502.1| (X83512) Yna1p [Saccharomyces cerevisiae] 142 9e-33
pir||B75183 probable proliferating-cell nucleolar antigen p120 P... 142 9e-33
pir||A48998 nucleolar protein p120 - mouse (fragment) 141 2e-32
gb|AAA36398.1| (M32110) proliferating cell nuclear protein P120 ... 140 3e-32
gi|5453792 nucleolar protein 1 (120kD) [Homo sapiens] >gi|117174... 140 3e-32
gi|11436286 nucleolar protein 1 (120kD) [Homo sapiens] 140 3e-32
pir||I40649 hypothetical protein 265 - Coxiella burnetii >gi|511... 138 1e-31
pir||F83643 conserved hypothetical protein PA0017 [imported] - P... 134 3e-30
gb|AAG19031.1| (AE005002) proliferating-cell nucleolar antigen; ... 131 1e-29
gb|AAF58504.1| (AE003822) CG8545 gene product [Drosophila melano... 126 4e-28
pir||A82744 conserved hypothetical protein XF0928 [imported] - X... 124 2e-27
pir||T33803 hypothetical protein W07E6.1 - Caenorhabditis elegan... 123 4e-27
gb|AAF14354.1|AF113138_1 (AF113138) nucleolar protein Nop2 [Erem... 123 4e-27
gb|AAK40477.1| Sun (fmu) protein (sun-2) [Sulfolobus solfataricus] 121 2e-26
pir||C81412 NOL1/NOP2/sun family protein Cj0636 [imported] - Cam... 119 7e-26
pir||C64945 probable rRNA methylase yebU - Escherichia coli >gi|... 117 2e-25
sp|P76273|YEBU_ECOLI HYPOTHETICAL 53.2 KD PROTEIN IN PRC-PRPA IN... 117 2e-25
pir||T08926 hypothetical protein T15N24.50 - Arabidopsis thalian... 116 5e-25
pir||A82193 Sun/nucleolar protein family protein VC1502 [importe... 116 6e-25
sp|P71675|YE07_MYCTU HYPOTHETICAL 48.5 KDA PROTEIN RV1407 >gi|74... 113 6e-24
gb|AAF51875.1| (AE003599) CG11109 gene product [Drosophila melan... 111 1e-23
gi|8922322 hypothetical protein FLJ10267 [Homo sapiens] >gi|7022... 104 2e-21
emb|CAB76894.1| (AL159139) hypothetical protein SCL6.29c [Strept... 104 2e-21
gb|AAK40701.1| Sun (fmu) protein (sun-1) [Sulfolobus solfataricus] 101 1e-20
pir||C72710 probable fmu protein APE1098 - Aeropyrum pernix (str... 101 2e-20
gi|11419358 hypothetical protein FLJ10267 [Homo sapiens] 99 1e-19
gb|AAF55643.1| (AE003725) CG5558 gene product [alt 2] [Drosophil... 96 8e-19
gb|AAF55642.1| (AE003725) CG5558 gene product [alt 1] [Drosophil... 96 8e-19
gi|11545785 hypothetical protein FLJ22609 [Homo sapiens] >gi|104... 91 2e-17
pir||T38517 hypothetical protein SPAC2C4.06c - fission yeast (S... 89 1e-16
pir||F72048 RNA methyltransferase - Chlamydophila pneumoniae (st... 87 5e-16
pir||A71500 probable RNA methyltransferase - Chlamydia trachomat... 84 3e-15
gb|AAF73608.1| (AE002350) Nol1/Nop2/Sun family protein [Chlamydi... 84 3e-15
pir||F75306 probable sun protein - Deinococcus radiodurans (stra... 84 3e-15
emb|CAB70100.1| (AL132949) contains similarity to Pfam domain: P... 83 5e-15
emb|CAB70101.1| (AL132949) contains similarity to Pfam domain: P... 83 5e-15
gi|6324306 Ynl022cp [Saccharomyces cerevisiae] >gi|1730712|sp|P5... 80 7e-14
emb|CAA21831.1| (AL033125) 1-evidence=predicted by content~1-met... 78 2e-13
gb|AAF45921.1| (AE003430) EG:EG0007.9 gene product [Drosophila m... 78 2e-13
pir||T38272 probable NOL1-NOP2-sun family nucleolar protein - fi... 76 6e-13
emb|CAC05734.1| (AL391744) putative methyltransferase possibily ... 73 9e-12
gi|6319447 Probable proliferating-cell nucleolar antigen (human ... 70 4e-11
gb|AAD22359.1|AC006592_16 (AC006592) unknown protein [Arabidopsi... 70 4e-11
dbj|BAB13875.1| (AK021688) unnamed protein product [Homo sapiens] 70 4e-11
>pir||D75033 probable proliferating-cell nucleolar antigen p120 PAB0830 -
Pyrococcus abyssi (strain Orsay)
>gi|5458674|emb|CAB50161.1| (AJ248287)
proliferating-cell nucleolar antigen P120, putative
[Pyrococcus abyssi]
Length = 449
Score = 911 bits (2328), Expect = 0.0
Identities = 449/449 (100%), Positives = 449/449 (100%)
Query: 1 MEEKEKKLSIPPKGIRAIIEAIRLGEVIKPSQYAKREAFKKHEVEEAWLNRVLTMIFYDI 60
MEEKEKKLSIPPKGIRAIIEAIRLGEVIKPSQYAKREAFKKHEVEEAWLNRVLTMIFYDI
Sbjct: 1 MEEKEKKLSIPPKGIRAIIEAIRLGEVIKPSQYAKREAFKKHEVEEAWLNRVLTMIFYDI 60
Query: 61 MKKQGLIDRAIQDIVGVNPLILDPWLRAALRVAVDIFLFHEPSSQTIKNLRWKGSDFISS 120
MKKQGLIDRAIQDIVGVNPLILDPWLRAALRVAVDIFLFHEPSSQTIKNLRWKGSDFISS
Sbjct: 61 MKKQGLIDRAIQDIVGVNPLILDPWLRAALRVAVDIFLFHEPSSQTIKNLRWKGSDFISS 120
Query: 121 RTHPYVGMYFWDTIDRIMQYKPNPRNELEELEWKYLAPAWFIERVRKILGNETEEFFRAV 180
RTHPYVGMYFWDTIDRIMQYKPNPRNELEELEWKYLAPAWFIERVRKILGNETEEFFRAV
Sbjct: 121 RTHPYVGMYFWDTIDRIMQYKPNPRNELEELEWKYLAPAWFIERVRKILGNETEEFFRAV 180
Query: 181 NERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGK 240
NERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGK
Sbjct: 181 NERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGK 240
Query: 241 IIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRL 300
IIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRL
Sbjct: 241 IIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRL 300
Query: 301 KEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESK 360
KEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESK
Sbjct: 301 KEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESK 360
Query: 361 IKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPY 420
IKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPY
Sbjct: 361 IKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPY 420
Query: 421 DPGFLEGTMRAWPHRHSTIGFFYALLRKD 449
DPGFLEGTMRAWPHRHSTIGFFYALLRKD
Sbjct: 421 DPGFLEGTMRAWPHRHSTIGFFYALLRKD 449
>pir||G71135 probable fmu protein - Pyrococcus horikoshii
>gi|3257262|dbj|BAA29945.1| (AP000003) 450aa long
hypothetical fmu protein [Pyrococcus horikoshii]
Length = 450
Score = 804 bits (2053), Expect = 0.0
Identities = 382/448 (85%), Positives = 421/448 (93%)
Query: 1 MEEKEKKLSIPPKGIRAIIEAIRLGEVIKPSQYAKREAFKKHEVEEAWLNRVLTMIFYDI 60
ME ++KKLSIPPKGIRAIIEAIRLGE+IKPSQYAKREAFKKH+VEEAWLNRVLTMIFYDI
Sbjct: 1 MEAEKKKLSIPPKGIRAIIEAIRLGEIIKPSQYAKREAFKKHDVEEAWLNRVLTMIFYDI 60
Query: 61 MKKQGLIDRAIQDIVGVNPLILDPWLRAALRVAVDIFLFHEPSSQTIKNLRWKGSDFISS 120
MKKQGLID+ I++IVGV PLILDPWLRAALRVAVDI LFH+PSSQTIKNLRWK SDFISS
Sbjct: 61 MKKQGLIDKVIKEIVGVTPLILDPWLRAALRVAVDIALFHDPSSQTIKNLRWKASDFISS 120
Query: 121 RTHPYVGMYFWDTIDRIMQYKPNPRNELEELEWKYLAPAWFIERVRKILGNETEEFFRAV 180
RTHPYVGMYFWD +D+I +YKPNP+NELEELEWKYLAP+W IERV+ ILG+ETE+FFR+V
Sbjct: 121 RTHPYVGMYFWDLLDKIFEYKPNPKNELEELEWKYLAPSWLIERVKGILGDETEDFFRSV 180
Query: 181 NERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGK 240
N+R EWIS+RVNTLKANVEEVI EL DGVEVVRSERVPTILKIKGPYNFD+S AFN+GK
Sbjct: 181 NKRHEWISIRVNTLKANVEEVIGELEEDGVEVVRSERVPTILKIKGPYNFDTSSAFNEGK 240
Query: 241 IIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRL 300
IIVQEEASAVAS++L+P+PGE +VDLAAAPGGKTTHLAELMKNKGKIYAFD+DK RMKRL
Sbjct: 241 IIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRL 300
Query: 301 KEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESK 360
K+FV RMGIKIVKP++KD RKAPEI+GEE+AD+VLLDAPCTSSGTIGKNPELRWRLRE K
Sbjct: 301 KDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDK 360
Query: 361 IKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPY 420
I EM+QLQRELLESAA+LVKPGG LLYTTCS+F EENE+N++WFLN H EFKLV L SPY
Sbjct: 361 INEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPLKSPY 420
Query: 421 DPGFLEGTMRAWPHRHSTIGFFYALLRK 448
DPGFLEGTMRAWPHRHSTIGFFYALL K
Sbjct: 421 DPGFLEGTMRAWPHRHSTIGFFYALLEK 448
>pir||A72478 probable fmu protein APE2465 - Aeropyrum pernix (strain K1)
>gi|5106170|dbj|BAA81481.1| (AP000064) 420aa long
hypothetical fmu protein [Aeropyrum pernix]
Length = 420
Score = 296 bits (750), Expect = 3e-79
Identities = 164/418 (39%), Positives = 248/418 (59%), Gaps = 9/418 (2%)
Query: 39 FKKHEVEEAWLNRVLTMIFYDIMKKQGLIDRAIQDIVGVNP---LILDPWLRAALRVAVD 95
F +H + + +RV T I Y + + QG++DRA+ +GV P + +P LR ALR++
Sbjct: 2 FARHGLLGSKYDRVFTAIMYKMFRMQGVLDRAVAHALGVRPEDVIGFEPMLRQALRLSAY 61
Query: 96 IFLFHEPSSQT-IKNLRWKGSDFISSRTHPYVGMYFWDTIDRIMQYKPNPRNELEELEWK 154
+ F E + I L G ++SR ++R++ P EE +
Sbjct: 62 LAQFDETRDRRLISALLRHGLPLLASRYGWRKARLVHKVLERLIDEPWKPSTREEEFMAR 121
Query: 155 YLAPAWFIERVRKILG--NETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEV 212
Y+ P + R+++ +E E+ A+N R SVRVNTLKA+ +EV + +R+ G+
Sbjct: 122 YMVPIDIVIMARRVVAGDDELEKLLDAIN-RPPVNSVRVNTLKASFDEVYKAIRSSGLYA 180
Query: 213 VRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGG 272
S+RV +++ +GP+N ++ +GKI+ Q+E+SA A+ +L P+PGE+++D+ AAPGG
Sbjct: 181 WPSDRVEGVIRYRGPFNDTLARLLAEGKIVPQDESSAAAAPLLQPRPGEIVLDMCAAPGG 240
Query: 273 KTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIK-DGRKAPEILGEEIA 331
KTTHLAEL + + +I FDI R++R+K V + ++K D AP+ILG
Sbjct: 241 KTTHLAELSRLQARILGFDIYWDRLRRMKTLVEATASEAAVAVVKADAANAPKILGRGSV 300
Query: 332 DRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCS 391
D++LLD PC+++G + KN + RWRL KI E+ +LQ+ LL++A + VKPGGL+LYT CS
Sbjct: 301 DKILLDPPCSTTGGLHKNVDARWRLTRRKIMELQELQKTLLDAAVETVKPGGLILYTVCS 360
Query: 392 LFTEENEENVKWFLNNHQEFKLVHLNSPYDPG-FLEGTMRAWPHRHSTIGFFYALLRK 448
+ EE E+ V L ++V LN PYD L GTMRAWPHRH GFFYALLRK
Sbjct: 361 ILAEEGEDVVLHALEKWGNLEIVPLNGPYDESPILPGTMRAWPHRHGVTGFFYALLRK 418
>pir||G75137 sun protein (fmu protein) PAB2390 - Pyrococcus abyssi (strain
Orsay) >gi|5458327|emb|CAB49816.1| (AJ248285) SUN
PROTEIN (FMU PROTEIN) [Pyrococcus abyssi]
Length = 450
Score = 204 bits (513), Expect = 2e-51
Identities = 120/311 (38%), Positives = 184/311 (58%), Gaps = 16/311 (5%)
Query: 147 ELEELEW---KYLAPAWFIERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIE 203
E + +EW ++ P W++E + +LG + N R + VRVNTLKA++++V
Sbjct: 146 EKDRIEWLSVRFSHPRWYVEYIIDMLGYDEAVRLLLSNLRPQRYYVRVNTLKADIDKVRR 205
Query: 204 ELRNDGVEVVRS--ERVPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGE 261
L +GV V + + V +L + P + KG ++Q+ ASA + +LNP+PGE
Sbjct: 206 YLEENGVRVALTPVDDVLKVLDYEKPVT--RLEWHRKGYFVIQDLASAYVAHVLNPEPGE 263
Query: 262 VIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRK 321
++DLAAAPG KT H A LM+NKG+I A D R+ ++KE + R+G+K VK + DG+
Sbjct: 264 RVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYDRLMKMKERMKRLGVKNVKLVHADGQ- 322
Query: 322 APEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKP 381
+ E ++++LDAPC+SSGT + PE++WR E KIK + +QR +L +A + ++
Sbjct: 323 --SFIDREGFEKIILDAPCSSSGTYRQFPEVKWRFDEEKIKRVISVQRNMLLNAYRNLRS 380
Query: 382 GGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPY-DPGFL---EGTMRAWPHRHS 437
GG + Y+TCS+ +ENEENV + L + F++V + D GFL E RAW H+H
Sbjct: 381 GGEMTYSTCSIRIDENEENVIFAL--EKGFEIVDYPFEWGDKGFLEIGEKVFRAWTHKHD 438
Query: 438 TIGFFYALLRK 448
FF A LRK
Sbjct: 439 CNSFFIAKLRK 449
>pir||C71102 probable fmu protein - Pyrococcus horikoshii
>gi|3257494|dbj|BAA30177.1| (AP000004) 450aa long
hypothetical fmu protein [Pyrococcus horikoshii]
Length = 450
Score = 202 bits (509), Expect = 6e-51
Identities = 119/312 (38%), Positives = 183/312 (58%), Gaps = 17/312 (5%)
Query: 145 RNELEELEWKYLAPAWFIERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEE 204
R+ +E L ++ P W++E V K+LG + N R + +RVNTLK +V+ V
Sbjct: 147 RDRIEWLSVRFSHPRWYVEYVVKLLGYDETVRLLLSNLRPQRYYIRVNTLKVDVDRVKRY 206
Query: 205 LRNDGVEVVRSERVPTILKIKGPYNFDSSKA--FNKGKIIVQEEASAVASLILNPQPGEV 262
L +GV V + V +LK+ Y +K + KG ++Q+ ASA + +LNP+PGE
Sbjct: 207 LEENGVRVSLTP-VDDVLKVL-EYEKPVTKLEWYRKGYFVIQDLASAYVAHVLNPEPGER 264
Query: 263 IVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKA 322
++DLAAAPG KT H A LM+N+G+I A D R+ +++E + ++G+K VK + DG+
Sbjct: 265 VLDLAAAPGSKTFHAAALMENRGEIVAVDYSYDRLIKMRERMKKLGVKNVKLVHADGQSY 324
Query: 323 PEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPG 382
E +E D+++LDAPC+SSGT + PE++WR E KIK + +QR +L +A + + G
Sbjct: 325 TE---KEKFDKIILDAPCSSSGTYRQFPEVKWRFNEEKIKRVISVQRNMLINAYRNLAGG 381
Query: 383 GLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPY---DPGFLE---GTMRAWPHRH 436
G + Y+TCS+ +ENE+NV + + E ++ P+ D GFLE R W H+H
Sbjct: 382 GEMTYSTCSIRIDENEQNVLFAIEKGLEL----VDYPFEWGDKGFLEIGDKVFRTWTHKH 437
Query: 437 STIGFFYALLRK 448
FF A LRK
Sbjct: 438 DCNSFFIAKLRK 449
>dbj|BAB06226.1| (AP001515) unknown conserved protein [Bacillus halodurans]
Length = 450
Score = 201 bits (507), Expect = 1e-50
Identities = 126/416 (30%), Positives = 211/416 (50%), Gaps = 30/416 (7%)
Query: 52 VLTMIFYDIMKKQGLIDRAIQDIVGVNPLILDPWLRAALRVAVDIFLF------HEPSSQ 105
+LT + Y +++Q +D I V L+ W+R LR++V ++ H +
Sbjct: 44 LLTELVYGTVQRQKTLDYYIASFVAKGKRKLEDWVRILLRLSVYQLVYLDKVPPHAIIHE 103
Query: 106 TIKNLRWKGSDFISSRTHPYVGMYFWDTIDRIMQYKPNP-----RNELEELEWKYLAPAW 160
+ + +G IS + + R MQ + P ++++ L +Y P W
Sbjct: 104 AVNIAKKRGHKGISGLVNGVL---------RSMQRQGMPPFAAIEDKVKRLAVEYSYPEW 154
Query: 161 FIERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPT 220
++R G E ++ RVN K VEE +E L ++GV+
Sbjct: 155 LVKRWIDQYGEEETVSICEEMLLPPKVTARVNVRKRTVEEALERLEHEGVQATNGVLSDD 214
Query: 221 ILKI-KGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAE 279
+ + KG S++ F G++ +Q+E+S + + + P+PGE I+D AAPGGK+TH+AE
Sbjct: 215 AIVVDKG--TITSTRLFQDGELTIQDESSMLVARAVAPRPGERILDACAAPGGKSTHMAE 272
Query: 280 LMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAP 339
M +G I + D+ + ++K ++E R+G+ +K D RKA E+ +E DR+L+DAP
Sbjct: 273 RMDGEGTIVSLDMHRHKVKLIEEQAKRLGLDNIKAQTLDARKAREVFADEPFDRILVDAP 332
Query: 340 CTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEE 399
C+ G I + P+++W RE+ +K + +Q ++L S AKLVKPGGLL+Y+TC++ ENE+
Sbjct: 333 CSGLGVIRRKPDIKWTKREADMKAIRNVQLDILSSVAKLVKPGGLLIYSTCTIDQLENEQ 392
Query: 400 NVKWFLNNHQEFKLVHLNSPYDPGFL-------EGTMRAWPHRHSTIGFFYALLRK 448
+ F+ H EF + P + EG + PH T GFF L+K
Sbjct: 393 VIAEFMEAHGEFSIDDTVLDRLPAAVQATCNIREGMVTILPHHFGTDGFFITCLKK 448
>pir||G75121 nucleolar protein PAB0523 - Pyrococcus abyssi (strain Orsay)
>gi|5458199|emb|CAB49688.1| (AJ248285) NUCLEOLAR PROTEIN
[Pyrococcus abyssi]
Length = 311
Score = 185 bits (464), Expect = 1e-45
Identities = 112/301 (37%), Positives = 172/301 (56%), Gaps = 19/301 (6%)
Query: 161 FIERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPT 220
F ER ++ G +A+ E+ R+NTLK +V+ +++ L G + RVP
Sbjct: 16 FAERYYQLWGERALRIAQAM-EKPLPRCFRINTLKISVQNLVKRLNKKGFQF---RRVPW 71
Query: 221 ILK----IKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTH 276
+ + P++ S+ + G I +QE +S + L+P+PGE++ D+AAAPGGKT++
Sbjct: 72 AREGFCLTREPFSITSTPEYLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSY 131
Query: 277 LAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLL 336
LA+LM+NKG IYAFD+D+ R+K + ++R+G+ V + + LG E D++LL
Sbjct: 132 LAQLMENKGVIYAFDVDEDRLKETRINLSRLGVLNVI-LFHSSSLYIDQLGIEF-DKILL 189
Query: 337 DAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEE 396
DAPCT SGTI KNPE +W IK LQ +L+E A +++KPGG+L+Y+TCSL EE
Sbjct: 190 DAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMKLVEKALEVLKPGGILVYSTCSLEPEE 249
Query: 397 NEENVKWFLNNHQ------EFKLVHLNSPYD---PGFLEGTMRAWPHRHSTIGFFYALLR 447
NE ++W L N ++ L P+ ++ R +P H T GFF A +R
Sbjct: 250 NEFVIQWVLENFDVELLPLKYGEPALTRPFGIELSDEIKKARRLYPDVHGTSGFFVAKIR 309
Query: 448 K 448
K
Sbjct: 310 K 310
>pir||H71009 probable proliferating-cell nucleolar protein p120 - Pyrococcus
horikoshii >gi|3257797|dbj|BAA30480.1| (AP000006) 315aa
long hypothetical proliferating-cell nucleolar protein
p120 [Pyrococcus horikoshii]
Length = 315
Score = 184 bits (463), Expect = 1e-45
Identities = 105/272 (38%), Positives = 160/272 (58%), Gaps = 18/272 (6%)
Query: 190 RVNTLKANVEEVIEELRNDGVEVVRSERVPTILK----IKGPYNFDSSKAFNKGKIIVQE 245
RVNTLK +V+++++ L G + +RVP + + P++ S+ F G I +QE
Sbjct: 48 RVNTLKISVQDLVKRLNKKGFQF---KRVPWAKEGFCLTREPFSITSTPEFLTGLIYIQE 104
Query: 246 EASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVN 305
+S + L+P+PGE++ D+AAAPGGKT++LA+LM+N G IYAFD+D+ R++ + ++
Sbjct: 105 ASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLS 164
Query: 306 RMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMA 365
R+G+ V E+ E D++LLDAPCT SGTI KNPE +W IK
Sbjct: 165 RLGVLNVILFHSSSLHIGELNVE--FDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQ 222
Query: 366 QLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQ------EFKLVHLNSP 419
LQ LLE +++KPGG+L+Y+TCSL EENE ++W L+N ++ L +P
Sbjct: 223 GLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVELLPLKYGEPALTNP 282
Query: 420 YDPGF---LEGTMRAWPHRHSTIGFFYALLRK 448
+ ++ R +P H T GFF A +RK
Sbjct: 283 FGIELSEEIKNARRLYPDVHETSGFFIAKIRK 314
>gi|11499621 proliferating-cell nucleolar antigen P120, putative [Archaeoglobus
fulgidus] >gi|7445096|pir||F69504 proliferating-cell
nucleolar antigen P120-like protein - Archaeoglobus
fulgidus >gi|2648496|gb|AAB89215.1| (AE000962)
proliferating-cell nucleolar antigen P120, putative
[Archaeoglobus fulgidus]
Length = 324
Score = 183 bits (460), Expect = 3e-45
Identities = 115/306 (37%), Positives = 172/306 (55%), Gaps = 9/306 (2%)
Query: 149 EELEWKYLAPAWFIERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRND 208
+EL KY + + R G+ETE+ RA E +R+NTLK + + ++E L +
Sbjct: 13 KELAVKYGYDEFIVRRWLHFFGDETEDIIRAFEEGIPKY-IRINTLKIDEKGLLERLESR 71
Query: 209 GVEVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAA 268
G ++ ++E ++ PY+ ++ + G V +++S + L L P+PGEV+VDLAA
Sbjct: 72 GFKLKKTEVPYCFEVVEEPYSIGATPEYLMGYYYVMDKSSCIPPLALEPKPGEVVVDLAA 131
Query: 269 APGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGE 328
+PGGKTT L+ LM+NKG + A + K R++ L + +NRMG V I DGR+ P +G
Sbjct: 132 SPGGKTTFLSMLMENKGAVIAVEPQKERLQPLIDNINRMGAMNVAVINVDGRRVP-AMGI 190
Query: 329 EIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYT 388
+ ADRVLLDAPCT G I K+P + + I + LQREL+ +A +K GG+++Y+
Sbjct: 191 K-ADRVLLDAPCTGEGIIHKDPSRKTDRGKEDILFCSSLQRELVLAAFDCLKEGGVMVYS 249
Query: 389 TCSLFTEENEENVKWFLNNHQ------EFKLVHLNSPYDPGFLEGTMRAWPHRHSTIGFF 442
TCSL EENE V + L + E+ L P + R +PHRH GFF
Sbjct: 250 TCSLTPEENEFVVDFLLERRKGVVEEIEWGDEALALPGVKNEVSKARRFYPHRHQCSGFF 309
Query: 443 YALLRK 448
A +RK
Sbjct: 310 VARIRK 315
>sp|P94464|SUN_BACSU SUN PROTEIN >gi|7429452|pir||E69878 RNA-binding Sun protein homolog
yloM - Bacillus subtilis >gi|2337803|emb|CAA74264.1|
(Y13937) putative Fmu protein [Bacillus subtilis]
>gi|2633946|emb|CAB13447.1| (Z99112) alternate gene
name: sun~similar to RNA-binding Sun protein [Bacillus
subtilis]
Length = 447
Score = 183 bits (459), Expect = 4e-45
Identities = 127/457 (27%), Positives = 229/457 (49%), Gaps = 27/457 (5%)
Query: 6 KKLSIPPKGIRAIIEAIRLGEVIKPSQYAKREAFKKHEVEEAWLNR-VLTMIFYDIMKKQ 64
KK S+ + A+I +L + S + K +E+ + NR +LT + Y ++ +
Sbjct: 2 KKTSVRDIALEALI---KLEQNQAYSNLLLKSVIKSNELSDQ--NRGLLTELVYGTLQNK 56
Query: 65 GLIDRAIQDIVGVNPLILDPWLRAALRVAVDIFLFHE--PSSQTIKNLRWKGSDFISSRT 122
+D ++ + P + PW+ LR+++ + E P I + + R
Sbjct: 57 IALDYMLKPFIN-KPQKVKPWVIQLLRLSLYQMEYLEKIPDRAAIH----EAVEIAKIRG 111
Query: 123 HPYVGMYFWDTIDRIMQYKPNPRNELEELEWKYLA-----PAWFIERVRKILGNETEEFF 177
H + F + + R +Q + P + E + LA P W ++ G E E
Sbjct: 112 HKGIAS-FVNGVLRSIQREGVPSFDAIEDPVRRLATETSHPEWLVKEWADAYGFEAAEKI 170
Query: 178 RAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKI-KGPYNFDSSKAF 236
++ ++RVN +KA+ E+++++ +G+EV + + +K+ KG + F
Sbjct: 171 CRIHLIPPKQTLRVNQMKADRAELLDQMAAEGIEVEKGDLAEDAVKLLKG--TIAGTHFF 228
Query: 237 NKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTR 296
G++ +Q+E+S + + L+P+ E ++D AAPGGK+ H+AELMKNKG + + D+ K +
Sbjct: 229 QNGEVSIQDESSMLVARALDPKSDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHK 288
Query: 297 MKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRL 356
+K +KE +R+G+ I+ D RKA E E DR+L+DAPC+ G I + P++++
Sbjct: 289 VKLIKEAADRLGLTIIHAETMDARKAGETFENEQFDRILVDAPCSGFGVIRRKPDMKYTK 348
Query: 357 RESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFK---- 412
+ +A++Q +L A LVK GG L+Y+TC++ EN+E + F+ H +F+
Sbjct: 349 KPDDSARLAEIQLSILREIAPLVKKGGTLVYSTCTMDRTENDEVIHAFIQEHPDFEPDLS 408
Query: 413 -LVHLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
L P +G ++ PH T GFF +RK
Sbjct: 409 LEKRLPEKVRPFVRDGRLQILPHYFGTDGFFICSMRK 445
>gi|11499905 fmu and fmv protein [Archaeoglobus fulgidus]
>gi|7445109|pir||D69540 fmu and fmv protein homolog -
Archaeoglobus fulgidus >gi|2648195|gb|AAB88932.1|
(AE000944) fmu and fmv protein [Archaeoglobus fulgidus]
Length = 437
Score = 178 bits (447), Expect = 1e-43
Identities = 107/313 (34%), Positives = 174/313 (55%), Gaps = 25/313 (7%)
Query: 148 LEELEWKYLAPAWFIERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRN 207
L+EL Y P WF++ ++LG + N R VRVN LK +VE V E L
Sbjct: 138 LKELSLTYFHPEWFVKYAIELLGEDGALKLMKANLRNPPTYVRVNELKGSVESVREYLEK 197
Query: 208 DGVEVVRSERVPTILKIKGPYNFDSSKAFN-KGKIIVQEEASAVASLILNPQPGEVIVDL 266
+GV ++ + + ++KG +S ++ +GK ++Q+ AS S LNP PG+V++DL
Sbjct: 198 NGV-ILEETFLDEVFRVKGYEKHPASLDWHSEGKYVIQDLASCFVSHALNPSPGDVVIDL 256
Query: 267 AAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEIL 326
AAAPG KT H+A LM+N+G+I A D +R++R++ + ++G+K V+ + DG +
Sbjct: 257 AAAPGMKTAHMAMLMQNEGRIVAVDNSPSRVRRMRSKLKQLGVKNVEIKLGDG-----CV 311
Query: 327 GEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLL 386
E AD+ L+DAPC+S+G P ++W E K + ++QR+++ +A ++ ++
Sbjct: 312 FECEADKALVDAPCSSTGNYASQPNVKWTFDERKFRATMKVQRKMIANA---LRNADEVV 368
Query: 387 YTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPYDPGF----------LEGTMRAWPHRH 436
Y TCS+ EENEEN+ K++ L SP+ G E +R++PH H
Sbjct: 369 YATCSITFEENEENLL-----KTGAKILPLPSPFGRGVREFRGVLFRDWEKVVRSFPHLH 423
Query: 437 STIGFFYALLRKD 449
T GFF + L +D
Sbjct: 424 DTAGFFISKLTRD 436
>sp|P72943|SUN_SYNY3 SUN PROTEIN (FMU PROTEIN) >gi|7429453|pir||S74920 fmu protein -
Synechocystis sp. (strain PCC 6803)
>gi|1652035|dbj|BAA16960.1| (D90902) fmu and fmv protein
[Synechocystis sp.]
Length = 446
Score = 174 bits (437), Expect = 2e-42
Identities = 125/421 (29%), Positives = 205/421 (48%), Gaps = 39/421 (9%)
Query: 51 RVLTMIFYDIMKKQGLIDRAIQDI----VGVNPLILDPWLRAALRVAVDI--FLFHEPSS 104
R T + Y ++++Q +D I+ + +G P P LR +++ + +L P+S
Sbjct: 41 RFCTELVYGVVRRQRTLDCLIEQLGDRPIGKQP----PDLRRIVQLGLYQLRYLDQVPAS 96
Query: 105 QTIKNLRWKGSDFISSRTHPYVGMYFWDTIDRIMQYKPNPRNELEE----LEWKYLAPAW 160
+ G D + + + R + + +N L++ L +Y P W
Sbjct: 97 AAVNT----GVDLAKANGLKGLSKVVNGMLRRYQRAEEQGKNILDQEKISLGEQYSFPDW 152
Query: 161 FIERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPT 220
+E + G E A + + +R+N LK + EV + L + +P
Sbjct: 153 LMELFEQTWGKAETESLCAYFNQNPSLDLRINPLKTSRVEVAQSLAELNLTTTAMAGLPQ 212
Query: 221 ILKIKGPYN-FDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAE 279
L++ G F +G VQ+ ++ + ILNPQP E I D+ AAPGGKTTH+AE
Sbjct: 213 GLRLGGKTGAITQLPGFAEGWWTVQDASAQWVAQILNPQPEETIFDVCAAPGGKTTHIAE 272
Query: 280 LMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVK----PIIKDGRKAPEILGEEIADRVL 335
LM ++G+IYA D R+++L R+G+ +K + + G K P E+ DR L
Sbjct: 273 LMGDQGQIYAGDRHGWRLQKLAVTQQRLGLTSIKIWEGDLTQPGVKPPV----ELVDRAL 328
Query: 336 LDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTE 395
LD PC+ GT+ +NP+LRWR + I + LQ+ LL++ A LVK GG L+Y+TC+L
Sbjct: 329 LDVPCSGLGTLHRNPDLRWRQTPATIATLLPLQQALLKAIAPLVKSGGTLVYSTCTLNPA 388
Query: 396 ENEENVKWFLNNHQEFKLVHLNSPYD--------PGFLEGTMRAWPHRHSTIGFFYALLR 447
ENE ++ FL +H++++ + P++ G + PH H GFF A L+
Sbjct: 389 ENEAQIERFLQDHEDWR----SEPFEWTSPQGQTNSVTSGMLTILPHHHHQDGFFIANLK 444
Query: 448 K 448
K
Sbjct: 445 K 445
>pir||A75030 probable proliferating-cell nucleolar antigen p120 PAB1173 -
Pyrococcus abyssi (strain Orsay)
>gi|5459193|emb|CAB50679.1| (AJ248288)
proliferating-cell nucleolar antigen P120, putative
[Pyrococcus abyssi]
Length = 385
Score = 173 bits (433), Expect = 5e-42
Identities = 110/264 (41%), Positives = 162/264 (60%), Gaps = 21/264 (7%)
Query: 189 VRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEAS 248
V + + + +E+IE R VEV T+ K K P + K+F KG Q S
Sbjct: 136 VGIGIARMDYKEMIEATRGLAVEV-------TLPKFKLP-SLSELKSFEKGYFYPQSLPS 187
Query: 249 AVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMG 308
VA+ +L P+ E+I+D+AAAPGGKTTH+A+L++N+G+I A D K R+K+++E + R+G
Sbjct: 188 MVATRVLEPKEDELIIDMAAAPGGKTTHIAQLLQNRGEIIAIDKSKNRLKKMEENLRRLG 247
Query: 309 IKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESK-IKEMAQL 367
+K VK I D R P+ LG + AD++LLDAPCT+ +G P+L W R K I+ A+
Sbjct: 248 VKNVKLIQMDARNLPD-LGLK-ADKILLDAPCTA---LGVRPKL-WEERTPKHIEATARY 301
Query: 368 QRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQ--EFKLVHLNSPYDPGF- 424
QR + +A K ++ GG+L+Y+TC+L EENE NVK+ L E + + + S PG
Sbjct: 302 QRAFIWAAIKSLRKGGVLVYSTCTLSYEENEGNVKFMLKKGMKLEDQQIFIGS---PGIG 358
Query: 425 LEGTMRAWPHRHSTIGFFYALLRK 448
L+ R +PH+H+T GFF A LRK
Sbjct: 359 LDKVQRFYPHKHNTQGFFIAKLRK 382
>pir||B81093 fmu and fmv protein, probable NMB1351 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7226595|gb|AAF41725.1| (AE002483) fmu and fmv
protein, putative [Neisseria meningitidis MC58]
Length = 418
Score = 170 bits (427), Expect = 2e-41
Identities = 103/302 (34%), Positives = 167/302 (55%), Gaps = 17/302 (5%)
Query: 158 PAWFIERVRKILGNETE-EFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSE 216
P W +E++++ E F R++N+ + +RVNTLK ++V+ L+ + + +
Sbjct: 122 PQWLVEQLKQHWREEEILAFGRSINQPAP-LDIRVNTLKGKRDKVLPLLQAESADAEATP 180
Query: 217 RVPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTH 276
P +++K + + F G + VQ+E S + +L++ + GE+IVD A GGKT
Sbjct: 181 YSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALLVGAKRGEIIVDFCAGAGGKTLA 240
Query: 277 LAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPI---IKDGRKAPEILGEEIADR 333
+ M NKG+IYAFDI + R+ LK + R G+ + P + + + G+ ADR
Sbjct: 241 VGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNIHPERIGSEHDARIARLAGK--ADR 298
Query: 334 VLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLF 393
VL+DAPC+ GT+ +NP+L++R + + + Q +L++A+KLVKP G L+Y TCS+
Sbjct: 299 VLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQHSILDAASKLVKPQGRLVYATCSIL 358
Query: 394 TEENEENVKWFLNNHQEFK-------LVHLNSPYDPGFLEGTMRAWPHRHSTIGFFYALL 446
EENE V+ FL+ H EF+ L L D G +R RH T GFF A+L
Sbjct: 359 PEENELQVERFLSEHPEFEPVNCAELLAGLKIDLDTG---KYLRLNSARHQTDGFFAAVL 415
Query: 447 RK 448
++
Sbjct: 416 QR 417
>pir||F81848 SUN-family protein NMA1563 [imported] - Neisseria meningitidis
(group A strain Z2491) >gi|7380204|emb|CAB84790.1|
(AL162756) SUN-family protein [Neisseria meningitidis
Z2491]
Length = 418
Score = 170 bits (426), Expect = 3e-41
Identities = 104/300 (34%), Positives = 169/300 (55%), Gaps = 13/300 (4%)
Query: 158 PAWFIERVRKILGNETE--EFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRS 215
P W +E++++ NE E F R++N+ + +RVNTLK ++V+ L+ + + +
Sbjct: 122 PQWLVEQLQQHW-NEEEILAFGRSINQAAP-LDIRVNTLKGKRDKVLPLLQAESADAEAT 179
Query: 216 ERVPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTT 275
P +++K + + F G + VQ+E S + +L++ + GE+IVD A GGKT
Sbjct: 180 PYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALLVGAKRGEIIVDFCAGAGGKTL 239
Query: 276 HLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKP---IIKDGRKAPEILGEEIAD 332
+ M NKG+IYAFDI + R+ LK + R G+ V P + + + G+ AD
Sbjct: 240 AIGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNVHPERISSEHDSRIARLAGK--AD 297
Query: 333 RVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSL 392
RVL+DAPC+ GT+ +NP+L++R + ++ + Q +L++A+KLVKP G L+Y TCS+
Sbjct: 298 RVLVDAPCSGLGTLRRNPDLKYRQSAETVAKLLEQQHSILDAASKLVKPQGRLVYATCSI 357
Query: 393 FTEENEENVKWFLNNHQEFKLVH----LNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
EENE V+ FL+ H EF+ V+ L S +R H T GFF A+L++
Sbjct: 358 LPEENELQVERFLSEHPEFEPVNCAELLQSLKVDLHTGKYLRLNSGEHQTDGFFAAVLQR 417
>sp|P36929|SUN_ECOLI SUN PROTEIN (FMU PROTEIN) >gi|7445095|pir||D65121 fmu protein -
Escherichia coli >gi|1772512|emb|CAA71359.1| (Y10307)
sun [Escherichia coli] >gi|2367212|gb|AAC76314.1|
(AE000407) orf, hypothetical protein [Escherichia coli
K12]
Length = 429
Score = 168 bits (420), Expect = 2e-40
Identities = 101/305 (33%), Positives = 165/305 (53%), Gaps = 14/305 (4%)
Query: 147 ELEELEWKYLAPAWFIERVRKILGNETEEFFRAVNERQE-WISVRVNTLKANVEEVIEEL 205
E + +YL P+W ++R++K + + A N+R W+ R+N + + + L
Sbjct: 135 EFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWL--RINRTHHSRDSWLALL 192
Query: 206 RNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVD 265
G++ P ++++ P + F G + VQ+ ++ L PQ GE I+D
Sbjct: 193 DEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILD 252
Query: 266 LAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIK--DGRKAP 323
L AAPGGKTTH+ E+ + ++ A DID+ R+ R+ + + R+G+K +K DGR
Sbjct: 253 LCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKAT---VKQGDGRYPS 308
Query: 324 EILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGG 383
+ GE+ DR+LLDAPC+++G I ++P+++W R+ I E+AQLQ E+L++ +K GG
Sbjct: 309 QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGG 368
Query: 384 LLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPYDPGFLEGTMRAWPHRHSTIGFFY 443
L+Y TCS+ EEN +K FL + +L +P PG + P GFFY
Sbjct: 369 TLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG-----KQNLPGAEEGDGFFY 423
Query: 444 ALLRK 448
A L K
Sbjct: 424 AKLIK 428
>pir||G71215 probable nucleolar protein - Pyrococcus horikoshii
>gi|3258435|dbj|BAA31118.1| (AP000007) 389aa long
hypothetical nucleolar protein [Pyrococcus horikoshii]
Length = 389
Score = 168 bits (420), Expect = 2e-40
Identities = 107/264 (40%), Positives = 159/264 (59%), Gaps = 21/264 (7%)
Query: 189 VRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEAS 248
V + + + +E+ E R VEV T+ K K P + KAF KG Q S
Sbjct: 139 VGIGIARMDYKEMTEATRGLAVEV-------TLPKFKLP-SLSELKAFEKGYFYPQGLPS 190
Query: 249 AVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMG 308
V + +L P+ +VI+D+AAAPGGKTTH+A+L++NKG+I A D K R+++++E + R+G
Sbjct: 191 MVTARVLEPKEDDVIIDMAAAPGGKTTHIAQLLENKGEIIAIDKSKNRLRKMEENIKRLG 250
Query: 309 IKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESK-IKEMAQL 367
+K VK + D RK P+ LG + AD++LLDAPCT+ +G P+L W R K I+ A+
Sbjct: 251 VKNVKLVQMDARKLPD-LGIK-ADKILLDAPCTA---LGVRPKL-WEERTLKHIEATARY 304
Query: 368 QRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQ--EFKLVHLNSPYDPGF- 424
QR + +A K ++ GG+L+Y+TC+L EENE NVK+ + E + + + S PG
Sbjct: 305 QRAFIWAAIKSLRRGGVLVYSTCTLSYEENEGNVKFMIRKGMKLEEQSIFIGS---PGIG 361
Query: 425 LEGTMRAWPHRHSTIGFFYALLRK 448
+ R +PH+H T GFF A LRK
Sbjct: 362 MNKVQRFYPHKHLTQGFFIAKLRK 385
>pir||A72245 sun protein - Thermotoga maritima (strain MSB8)
>gi|4982078|gb|AAD36579.1|AE001799_11 (AE001799) sun
protein [Thermotoga maritima]
Length = 431
Score = 166 bits (416), Expect = 5e-40
Identities = 114/386 (29%), Positives = 198/386 (50%), Gaps = 30/386 (7%)
Query: 51 RVLTMIFYDIMKKQGLIDRAIQDIVGVNPLILDPWLRAALRVAVDIFLF------HEPSS 104
R + + +++K+ L+D I ++ + P +R ALR+ LF + S
Sbjct: 40 RFFKELVWGVVRKEELLDWYINQLLKKKDI--PPAVRVALRMGAYQLLFMNSVPDYAAVS 97
Query: 105 QTIKNLRWKGSDFISSRTHPYVGMYFWDTIDRIMQYKPNPRNELEELEWKYLAPAWFIER 164
+T+K + K +F + + R ++ P P+ EL Y P W +
Sbjct: 98 ETVKLV--KNENFKK----------LVNAVLRRLRTVPEPK----ELHLVYSHPEWIVNY 141
Query: 165 VRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTIL-- 222
R L E N+ + +RVN+L A EEVI+ L +G E V + P L
Sbjct: 142 WRSFLPEEAVLRIMKWNQEPLPVMLRVNSLAATKEEVIKILAEEGTEAVPGKHAPFSLIV 201
Query: 223 -KIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELM 281
K+ P N S+ N G VQ E+S + + +PG ++D AAPGGKTT +AELM
Sbjct: 202 RKLGVPMN--DSRVINDGLASVQGESSQLVPFFMELRPGLRVLDTCAAPGGKTTAIAELM 259
Query: 282 KNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCT 341
K++GKI A DI + +++ +++ R+ + ++ I D + E + ++ DRVL+DAPCT
Sbjct: 260 KDQGKILAVDISREKIQLVEKHAKRLKLSSIETKIADAERLTEYV-QDTFDRVLVDAPCT 318
Query: 342 SSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENV 401
S GT +PE+ R+ + ++ +++Q +++ A +L++ GG+LLY+TC++ EEN E V
Sbjct: 319 SLGTARNHPEVLRRVNKEDFEKFSEIQLRMVQQAWQLLEKGGILLYSTCTVTKEENTEVV 378
Query: 402 KWFLNNHQEFKLVHLNSPYDPGFLEG 427
K F+ ++ +++ + +EG
Sbjct: 379 KRFVYEQKDVEVIDIRDKMKEFEVEG 404
>sp|Q60343|Y026_METJA HYPOTHETICAL PROTEIN MJ0026 >gi|2127710|pir||B64303 120K
proliferating-cell nucleolar antigen homolog -
Methanococcus jannaschii >gi|1592257|gb|AAB98007.1|
(U67461) proliferating-cell nucleolar antigen,
FMU/NOL1/NOP2 family [Methanococcus jannaschii]
Length = 274
Score = 163 bits (409), Expect = 3e-39
Identities = 101/268 (37%), Positives = 150/268 (55%), Gaps = 15/268 (5%)
Query: 189 VRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEAS 248
+RVNTLK N E + + L N GV + ++ K P++ S+ + G + Q +S
Sbjct: 13 IRVNTLKINPEVLKKRLENKGVVLEKTFLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISS 72
Query: 249 AVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMG 308
+ ++LNP+ + I+D+ AAPGGKTTHLA+LMKNKG I A +I KTR K LK +NRMG
Sbjct: 73 MIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG 132
Query: 309 IKIVKPIIKDGRKAPEIL--GEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQ 366
+ I D RK + L E D++LLDAPC+ + KN + E IK +
Sbjct: 133 VLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNR----NVSEEDIKYCSL 188
Query: 367 LQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNS------PY 420
Q+EL++ L+K G L+Y+TCS+ EENEE +K+ L + +L+ + +
Sbjct: 189 RQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRNDVELIIIKANEFKGINI 248
Query: 421 DPGFLEGTMRAWPHRHSTIGFFYALLRK 448
G+++GT+R +P FF A LRK
Sbjct: 249 KEGYIKGTLRVFPPNEP---FFIAKLRK 273
>sp|P44788|SUN_HAEIN SUN PROTEIN (FMU PROTEIN) >gi|1074459|pir||F64155 hypothetical
protein HI0624 - Haemophilus influenzae (strain Rd KW20)
>gi|1573620|gb|AAC22284.1| (U32745) sun protein (sun)
[Haemophilus influenzae Rd]
Length = 451
Score = 161 bits (402), Expect = 2e-38
Identities = 101/302 (33%), Positives = 165/302 (54%), Gaps = 14/302 (4%)
Query: 153 WKYLAPAWFIERVRKILGNETEEFFRAVNERQE-WISVRVNTLKANVEEVIEELRNDGVE 211
W+ L P WF+ +++K N E A N++ W+ RVN+ K +E L GV
Sbjct: 155 WQTLHPEWFVNKLKKAYPN-WREIIEANNQKPPMWL--RVNSQKNALETYRTLLEEQGVS 211
Query: 212 VVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPG 271
S P L + P F +G + VQ+ ++ A+ +L P+ E I+D AAPG
Sbjct: 212 SKTSHH-PNALCLDIPIAVQKLPHFEEGAVTVQDLSAQWAATLLEPKNEEWILDACAAPG 270
Query: 272 GKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGE--- 328
GKTTH+ EL + + A D++ R+KR++E + R+ + + + D K E L E
Sbjct: 271 GKTTHILELAP-QANVIALDVESHRLKRVEENLERLNQQAIV-VCGDASKPDEWLAEIGK 328
Query: 329 --EIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLL 386
DR+LLDAPC+++G I ++P+++W +E+ I ++ +LQ+++L + + +KP G+LL
Sbjct: 329 SAAKFDRILLDAPCSATGVIRRHPDIKWLRKETDIAQLVELQKKILSALWEKLKPNGVLL 388
Query: 387 YTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPYDPGFLEGTMRAWPHRHSTIGFFYALL 446
Y TCS+ EEN E ++ FLN H + +L+ L P+ + P +S GF+YA L
Sbjct: 389 YATCSVLPEENCEQIQAFLNAHADAELLSL--PFSDDKSAVGFQFIPQPNSGDGFYYAKL 446
Query: 447 RK 448
K
Sbjct: 447 LK 448
>dbj|BAB01410.1| (AP000375) contains similarity to SUN and FMU
proteins~gene_id:MJG19.14 [Arabidopsis thaliana]
Length = 531
Score = 157 bits (393), Expect = 2e-37
Identities = 111/342 (32%), Positives = 173/342 (50%), Gaps = 7/342 (2%)
Query: 110 LRWKGSDFISSRTHPYVGMYFWDTIDRIMQYKPNPRNELEELEWKYLAPAWFIERVRKIL 169
LR DF++ V + D + + + + + R + L + P W + R K L
Sbjct: 188 LRPGAGDFVNGILRKLVSLKEKDALP-LPKVEGDDRAQARALATLHSHPVWMVRRWVKYL 246
Query: 170 GNETEEFFRAVNERQEWISVRVNTLKANVE-EVIEELRNDGVEVVRSERVPTILKIK-GP 227
G + N S+R NT + +++E L + V S + ++IK G
Sbjct: 247 GLDEATKLMIWNNNDPGFSLRANTGRDITRADLVERLNSLKVPHELSLHLEEFVRIKTGL 306
Query: 228 YNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKI 287
+ +G VQ+E++ + ++ PQPGE I+D AAPGGKT +A +K +G I
Sbjct: 307 QTVVQAGLLKEGICSVQDESAGLIVSVVKPQPGERIMDACAAPGGKTLFMASCLKGQGMI 366
Query: 288 YAFDIDKTRMKRLKEFVNRMGIK-IVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTI 346
YA D+++ R++ L E + ++ I D R E E D+VLLDAPC+ G +
Sbjct: 367 YAMDVNEGRLRILGETAKSHQVDGLITTIHSDLRVFAET-NEVQYDKVLLDAPCSGLGVL 425
Query: 347 GKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLN 406
K +LRW + + E+ +LQ ELL+SA+KLVK GG+L+Y+TCS+ EENE V+ FL
Sbjct: 426 SKRADLRWNRKLEDMLELTKLQDELLDSASKLVKHGGVLVYSTCSIDPEENEGRVEAFLL 485
Query: 407 NHQEFKLVHLNSPYDPGFL--EGTMRAWPHRHSTIGFFYALL 446
H EF + + S F+ +G + P +HS G F A L
Sbjct: 486 RHPEFTIDPVTSFVPSSFVTSQGFFLSNPVKHSLDGAFAARL 527
>pir||C72748 probable sun protein APE0514 - Aeropyrum pernix (strain K1)
>gi|5104163|dbj|BAA79479.1| (AP000059) 352aa long
hypothetical sun protein [Aeropyrum pernix]
Length = 352
Score = 155 bits (388), Expect = 9e-37
Identities = 95/300 (31%), Positives = 148/300 (48%), Gaps = 13/300 (4%)
Query: 162 IERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTI 221
+E+ +ILG E A N++ ++R N E+ L G V R +P
Sbjct: 51 VEKYIQILGEEEARELIAWNDKPLPETIRCNDFLIPCSELESMLSQKGFLVSRIPWLPHG 110
Query: 222 LKI-KGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAEL 280
+++ + P ++ + +G +Q+ S + + +L +PGE ++D+AAAPGGK+TH+ +L
Sbjct: 111 IEVLEQPIRVGATHEYMQGLYYIQDPGSMLVAYLLGVEPGETVLDMAAAPGGKSTHIQQL 170
Query: 281 MKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPC 340
++ + A DI + RM+ L+ + RMG + + D R P I G ADRV+LDAP
Sbjct: 171 SRDSTILVAVDISRRRMRALRSHMQRMGFRSYVAVRADSRLLPRIAGTGWADRVMLDAPS 230
Query: 341 TSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEEN 400
T G I K+PE R ++ + + LQ ELL +A L +PG +LY CS EE E
Sbjct: 231 TGEGIIRKDPERRRSRSQADVLRIHYLQLELLYTAVDLARPGAPILYAACSTSPEEGELV 290
Query: 401 VKWFLNNHQEFKLVHLNSPYD------------PGFLEGTMRAWPHRHSTIGFFYALLRK 448
V L + ++ L SP G +R WP RH T GFF +R+
Sbjct: 291 VSRLLELRSDVEVERLESPVGSPGVDSYLGVDISGEARRCLRLWPQRHGTEGFFICRVRR 350
>pir||G82372 sun protein VC0044 [imported] - Vibrio cholerae (group O1 strain
N16961) >gi|9654437|gb|AAF93222.1| (AE004095) sun
protein [Vibrio cholerae]
Length = 434
Score = 155 bits (388), Expect = 9e-37
Identities = 96/296 (32%), Positives = 158/296 (52%), Gaps = 11/296 (3%)
Query: 154 KYLAPAWFIERVRKILGNETEEFFRAVNERQE-WISVRVNTLKANVEEVIEELRNDGVEV 212
+Y P W ++ +++ + ++ A N + W+ RVN E L G+
Sbjct: 147 RYGHPGWLLKLLKESYPEQWQQIVEANNSKAPMWL--RVNHQHHTRAEYQALLEQAGIVT 204
Query: 213 VRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGG 272
+ L ++ P + F +G + VQ+ A+ +A L PQ GE+I+D AAPGG
Sbjct: 205 TPHAQAEDALCLETPCDVHQLPGFAEGWVSVQDAAAQLALTYLAPQAGELILDCCAAPGG 264
Query: 273 KTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIAD 332
KT H+ E + ++ A D D+TR+KR++E + R+ + + I D R + E D
Sbjct: 265 KTAHILERTP-ESQVVAIDCDETRLKRVRENLQRLELT-AQVICGDARYPQQWWQGEQFD 322
Query: 333 RVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSL 392
R+LLDAPC+++G I ++P+++W R I +A+LQRE+L++ + +KPGG L+Y TCS+
Sbjct: 323 RILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREILDAMWQQLKPGGSLVYATCSI 382
Query: 393 FTEENEENVKWFLNNHQEFKLVHLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
+EN VK FL + +LV + P PG + P + GF+YA+L K
Sbjct: 383 TPQENRLQVKAFLERTPDARLVG-SDPAQPG-----RQILPGEEAMDGFYYAVLSK 432
>dbj|BAB08657.1| (AB026659) nucleolar protein-like [Arabidopsis thaliana]
Length = 682
Score = 155 bits (388), Expect = 9e-37
Identities = 103/289 (35%), Positives = 157/289 (53%), Gaps = 27/289 (9%)
Query: 182 ERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDS------SKA 235
E+Q S+R NTLK ++ + L N GV + + + G +DS +
Sbjct: 280 EKQRPTSIRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKV----GLVIYDSQVPIGATPE 335
Query: 236 FNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKT 295
+ G ++Q +S + + L P+ E IVD+AAAPGGKTT++A LMKN G IYA ++
Sbjct: 336 YLAGYYMLQGASSFLPVMALAPRENERIVDVAAAPGGKTTYIAALMKNTGLIYANEMKVP 395
Query: 296 RMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWR 355
R+K L ++RMG+ DGR+ P++LG+ DRVLLDAPC+ +G I K+ ++
Sbjct: 396 RLKSLTANLHRMGVTNTIVCNYDGRELPKVLGQNTVDRVLLDAPCSGTGIISKDESVKIT 455
Query: 356 LRESKIKEMAQLQRELLESAAKLV----KPGGLLLYTTCSLFTEENEENVKWFLNNHQEF 411
+IK+ A LQ++LL +A +V K GG ++Y+TCS+ ENE + + L ++
Sbjct: 456 KTMDEIKKFAHLQKQLLLAAIDMVDANSKTGGYIVYSTCSIMVTENEAVIDYALKK-RDV 514
Query: 412 KLVHLNSPYD-PGF-----------LEGTMRAWPHRHSTIGFFYALLRK 448
KLV + GF L+ T R +PH H+ GFF A L+K
Sbjct: 515 KLVTCGLDFGRKGFTRFREHRFQPSLDKTRRFYPHVHNMDGFFVAKLKK 563
>sp|P45679|SUN_COXBU SUN PROTEIN (FMU PROTEIN)
Length = 430
Score = 154 bits (386), Expect = 2e-36
Identities = 87/301 (28%), Positives = 168/301 (54%), Gaps = 4/301 (1%)
Query: 151 LEWKYLAPAWFIERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGV 210
+E +Y P WFI+ ++K + E A N R +++RVN K + E +E L +
Sbjct: 131 IEGQYAHPLWFIQHIKKAWPDHWESILIANNARPP-MTLRVNLTKISREIYLEMLDQKNI 189
Query: 211 EVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAP 270
+ +P ++++ P + FN+G +Q+ A A+ +L + + ++D AAP
Sbjct: 190 SAKPLDFLPAAIQLEKPCSVHQLPGFNEGYCYIQDAAGQFAAYLLKLENNQTVLDACAAP 249
Query: 271 GGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKI--VKPIIKDGRKAPEILGE 328
G KT+H+ E+ + + A D +K R+ R+KE + R+G++ ++ ++ D + +
Sbjct: 250 GSKTSHILEVNPHLKTLVAIDNNKQRLNRIKENITRLGLRQEHLQCLLADVSQIDQWSSG 309
Query: 329 EIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYT 388
E+ DR+LLDAPC+++G I ++P+++ + I + Q + +LL + ++K GG LLY+
Sbjct: 310 ELFDRILLDAPCSATGVIRRHPDIKLLRQPGDISQYHQKKLQLLNALWTVLKAGGFLLYS 369
Query: 389 TCSLFTEENEENVKWFLNNHQEFKLVHLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
TCS+ +ENE+ ++ FL+ H + +L N + L+ ++ P + + GF+Y+LL K
Sbjct: 370 TCSVLPDENEKVIEEFLSTHDKVELSPTN-VHGGLQLKYGVQQLPGQDNKDGFYYSLLFK 428
Query: 449 D 449
+
Sbjct: 429 N 429
>pir||T40814 probable nucleolar protein-NOL1-NOP2-sun family - fission yeast
(Schizosaccharomyces pombe) >gi|3810844|emb|CAA21805.1|
(AL032684) putative nucleolar protein; NOL1/NOP2/sun
family [Schizosaccharomyces pombe]
Length = 608
Score = 152 bits (381), Expect = 6e-36
Identities = 104/297 (35%), Positives = 157/297 (52%), Gaps = 22/297 (7%)
Query: 171 NETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGV--EVVRSERVPTILKIKGPY 228
+E EFF A NE +++R NTLK E+ + L N GV E + + +
Sbjct: 250 SEAVEFFEA-NEMPRPVTIRTNTLKTQRRELAQALINRGVNLEPIGKWSKVGLQVFESQV 308
Query: 229 NFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIY 288
++ + G I+Q +S + + L PQP E I+D+++APGGK T++A L KN G I+
Sbjct: 309 PIGATPEYLAGHYILQAASSFLPVMALAPQPNERILDMSSAPGGKVTYVAALQKNTGIIF 368
Query: 289 AFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAP-EILGEEIADRVLLDAPCTSSGTIG 347
A D +K R K L ++R+G++ DGRK P E++G DRVLLDAPC+ +G I
Sbjct: 369 ANDSNKARTKALSANIHRLGVRNAIVCNYDGRKFPNEVIGG--FDRVLLDAPCSGTGVIY 426
Query: 348 KNPELRWRLRESKIKEMAQLQRELLESAAKLV----KPGGLLLYTTCSLFTEENEENVKW 403
K+ ++ E ++ LQR+LL SA V K GG ++Y+TCS+ +E+E +++
Sbjct: 427 KDQSVKTNKSERDFDTLSHLQRQLLLSAIDSVNADSKTGGFIVYSTCSITVDEDEAVIQY 486
Query: 404 FLNNHQEFKLVHLNSPYD-PGF-----------LEGTMRAWPHRHSTIGFFYALLRK 448
L KLV + GF L+ T R +PH H+ GFF A L+K
Sbjct: 487 ALKKRPNVKLVSTGLEFGREGFTRFREKRFHPSLKLTRRYYPHVHNIDGFFVAKLKK 543
>gb|AAA58086.1| (U18997) we have one ORF, ECFMT has fmu and fmv [Escherichia coli]
Length = 386
Score = 151 bits (377), Expect = 2e-35
Identities = 86/254 (33%), Positives = 145/254 (56%), Gaps = 9/254 (3%)
Query: 147 ELEELEWKYLAPAWFIERVRKILGNETEEFFRAVNERQE-WISVRVNTLKANVEEVIEEL 205
E + +YL P+W ++R++K + + A N+R W+ R+N + + + L
Sbjct: 135 EFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWL--RINRTHHSRDSWLALL 192
Query: 206 RNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVD 265
G++ P ++++ P + F G + VQ+ ++ L PQ GE I+D
Sbjct: 193 DEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILD 252
Query: 266 LAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIK--DGRKAP 323
L AAPGGKTTH+ E+ + ++ A DID+ R+ R+ + + R+G+K +K DGR
Sbjct: 253 LCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKAT---VKQGDGRYPS 308
Query: 324 EILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGG 383
+ GE+ DR+LLDAPC+++G I ++P+++W R+ I E+AQLQ E+L++ +K GG
Sbjct: 309 QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGG 368
Query: 384 LLLYTTCSLFTEEN 397
L+Y TCS+ EEN
Sbjct: 369 TLVYATCSVLPEEN 382
>gi|11498459 proliferating-cell nucleolar antigen P120, putative [Archaeoglobus
fulgidus] >gi|7445110|pir||E69356 proliferating-cell
nucleolar antigen P120 homolog - Archaeoglobus fulgidus
>gi|2649749|gb|AAB90385.1| (AE001045) proliferating-cell
nucleolar antigen P120, putative [Archaeoglobus
fulgidus]
Length = 317
Score = 146 bits (366), Expect = 3e-34
Identities = 113/327 (34%), Positives = 177/327 (53%), Gaps = 37/327 (11%)
Query: 143 NPRNELEELE--WKYLAPAWFIERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEE 200
+P ++EE++ ++ + P + ER+ KI G++ EFFR + + +SVRVNTLKA V+E
Sbjct: 6 DPDGDIEEIKEAFRLINPELY-ERLLKIDGSD--EFFRYMVKPLR-VSVRVNTLKAEVDE 61
Query: 201 VIEELRNDGVEVVRSERVPTILKIKGPY----NFDSSKAFNKGKIIVQEEASAVASLILN 256
V+E L+ + + RVP + G Y F G I QE AS + L++
Sbjct: 62 VVENLKE-----LITGRVPWCEE--GFYLSIDEFSRIPEHQLGLIFSQEAASMIPPLVME 114
Query: 257 PQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPII 316
+P ++D+AA+PG KTT +A+ ++N+G I A D+ +R+ L + R G+ I K +
Sbjct: 115 LEPKMTVLDIAASPGAKTTQIAQYLQNEGCIVANDVKHSRINILISNLQRCGVLIAKVTV 174
Query: 317 KDGRKAPEILGEEIADRVLLDAPCTSSGTIGKN-PELR-WRLRESKIKEMAQLQRELLES 374
KDGR D VL+DAPC++ G I KN +R W++R+ +++LQ+ LL +
Sbjct: 175 KDGRYFGRFRNR--FDAVLVDAPCSNMGMIRKNYRNIRLWKMRD--CYGLSKLQKSLLMA 230
Query: 375 AAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPYD------------- 421
A K VKPGG+++Y+TC+L ENEE V + L N + ++ +N P
Sbjct: 231 AYKAVKPGGVVVYSTCTLEPIENEEVVDYILRN-TDAEIEEVNLPVKGVEPFTKFDGKEY 289
Query: 422 PGFLEGTMRAWPHRHSTIGFFYALLRK 448
+ +R P T GFF A LRK
Sbjct: 290 SEEVRKCLRLHPQSSDTEGFFVAKLRK 316
>dbj|BAA31227.1| (D86411) Fmv [Vibrio alginolyticus]
Length = 225
Score = 146 bits (366), Expect = 3e-34
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 8/227 (3%)
Query: 222 LKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELM 281
+K+ P + F+KG + VQ+ A+ ++ L PQ GE+I+D AAPGGKT H+ E
Sbjct: 4 IKLAAPCDVMKLPGFDKGWVSVQDAAAQLSINYLKPQDGELILDCCAAPGGKTAHILERT 63
Query: 282 KNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCT 341
++ A D D TR+KR+ E + R+ ++ K + D R E E DR+LLDAPC+
Sbjct: 64 SGS-EVVAIDCDDTRLKRVHENLKRLNLQ-AKVVCGDARNPQEWWQGEQFDRILLDAPCS 121
Query: 342 SSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENV 401
++G I ++P+++W R I +A+LQ E+ ++ +KPGG ++Y TCS+ +EN E V
Sbjct: 122 ATGVIRRHPDIKWLRRADDIAALAELQSEIFDAMWTQLKPGGTMVYATCSITPQENVEQV 181
Query: 402 KWFLNNHQEFKLVHLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
K FL + +L+ + P PG + P GF+YA+L K
Sbjct: 182 KAFLARTADAQLLD-SDPDQPG-----RQILPGEEDMDGFYYAVLTK 222
>emb|CAA10711.1| (AJ132604) sunL protein [Lactococcus lactis]
Length = 424
Score = 146 bits (366), Expect = 3e-34
Identities = 107/400 (26%), Positives = 191/400 (47%), Gaps = 26/400 (6%)
Query: 53 LTMIFYDIMKKQGLIDRAIQDIVGVNPLILDPWLRAALRVAVDIFLFHE--PSSQTIKNL 110
+T + Y ++ K+ L++ I ++ P PW + L + + LF + P S +
Sbjct: 44 VTALVYGVVSKKALLEWYITPLLKKEP---KPWAKMLLLLTIYQVLFMDKVPISAAVDE- 99
Query: 111 RWKGSDFISSRTHPYVGMYFWDTIDRIMQYKPNPRNELEELEWKYLAPAWFIER-VRKIL 169
+ I+ R F + + R + E ++ E KY P +++ VR+
Sbjct: 100 ----AVKIAKRHDGQATANFINAVLRNFMRSEHRNEEPKDWETKYSMPKLLLDKMVRQFG 155
Query: 170 GNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYN 229
G T E ++ E+ +S+R ++ +E + R + I N
Sbjct: 156 GKRTGEILESL-EKPSHVSLR------KIDPTVE------IAGTRPSLLTETALIADSGN 202
Query: 230 FDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYA 289
F ++ F G+I +Q+E S + + L + E ++D AAPGGK+TH+A+ + G I A
Sbjct: 203 FSITEEFQTGRITIQDETSQLVAPQLELEGTEEVLDACAAPGGKSTHMAQYLTT-GHITA 261
Query: 290 FDIDKTRMKRLKEFVNRMGIKIVKPIIK-DGRKAPEILGEEIADRVLLDAPCTSSGTIGK 348
D+ + ++ + + R + K D E G E DR+L+DAPC+ G I +
Sbjct: 262 LDLYEHKLDLINQNAQRQHVADKITTQKADATMIYENFGPEKFDRILVDAPCSGIGLIRR 321
Query: 349 NPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNH 408
P++R+R S ++ ++Q E+L SA+K +K G+++Y+TC++F EEN + V FL NH
Sbjct: 322 KPDIRYRKESSDFIDLQKIQLEILNSASKSLKKSGIMVYSTCTIFDEENFDVVHEFLENH 381
Query: 409 QEFKLVHLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
F+ V +++ EG + P + T GFF A +K
Sbjct: 382 PNFEQVEISNEKPEVIKEGCLFITPEMYHTDGFFIAKFKK 421
>pir||B81236 16S RNA methyltransferase NMB0112 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7225328|gb|AAF40571.1| (AE002370) 16S RNA
methyltransferase [Neisseria meningitidis MC58]
Length = 419
Score = 144 bits (360), Expect = 2e-33
Identities = 88/295 (29%), Positives = 150/295 (50%), Gaps = 18/295 (6%)
Query: 154 KYLAPAWFIERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVV 213
K+ P W++ ++ A+ +++RVN N E +E+L +G+
Sbjct: 142 KHNLPLWWVAYLKNHYPKHWHNIAAALQSHPP-MTLRVNRRHGNAESYLEKLVAEGIAAK 200
Query: 214 RSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGK 273
+ L+ P N F+ G + VQ+ + A+ +LNP+ GE I+D AAPGGK
Sbjct: 201 ALDEYAVTLEEAVPVN--RLPGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGK 258
Query: 274 TTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADR 333
T H+ EL + + A DID R+KR+++ + R+G + D + + D
Sbjct: 259 TGHILELADCR--VTALDIDAGRLKRVEDNIARLGFQTASTACADAQDLSAWYDGKPFDA 316
Query: 334 VLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLF 393
VL D PCT+SG +NP+++W R + + A+ Q LL++ +++K GG +L TCS+F
Sbjct: 317 VLADVPCTASGVARRNPDVKWLRRPTDALKTARQQEALLDALWQVLKSGGRMLIATCSVF 376
Query: 394 TEENEENVKWFLNNHQEFKLVHLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
EEN+ ++ FLN H + +L+ + P++H GF+YAL++K
Sbjct: 377 VEENDGQLQKFLNRHADAELIE------------SRVLLPNKHQD-GFYYALIQK 418
>gb|AAK40591.1| Proliferating-cell nucleolar antigen p120 homolog [Sulfolobus
solfataricus]
Length = 339
Score = 144 bits (360), Expect = 2e-33
Identities = 100/326 (30%), Positives = 172/326 (52%), Gaps = 18/326 (5%)
Query: 140 YKPNPRNELEELEWKYLAPAWFIERVRKILGNETE--EFFRAVNERQEWISVRVNTLKAN 197
++ +P + + L KY + IER + E E E+ + + + S+R NTLK +
Sbjct: 16 FQISPSYKAKRLASKYRFLDYMIERYLNMFSTEEELEEYLNSCSFPLKK-SIRCNTLKTD 74
Query: 198 VEEVIEELRNDG--VEVVRSERVPTILKIKGPY-NFDSSKAFNKGKIIVQEEASAVASLI 254
+++ E + G +E V+ + ++K P + S+ + G +Q AS V + +
Sbjct: 75 CKKLEEIMLEKGFVLEKVKWLQHGYVVKRTPPKPSLGSTLEYLMGYYHIQGLASMVPAYV 134
Query: 255 LNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKP 314
LNP + ++D+AAAPGGKTT L+++M+NKG + A + ++R++ L VNR+G + V
Sbjct: 135 LNPSYDDFVLDMAAAPGGKTTQLSQIMQNKGLVIAVEKKRSRIRALLSNVNRLGAENVVL 194
Query: 315 IIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLES 374
I D I + D++LLDAPC+ G I K+P R++ +++ A LQ L+E
Sbjct: 195 IKTDALNLININKSQF-DKILLDAPCSGEGLIQKDPTRRYKTTMDDLRDFAHLQLSLIEI 253
Query: 375 AAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPYDPGFLE-------- 426
A +L+K GG ++Y+TCS+ EE+E V + + + P G++E
Sbjct: 254 AYELLKKGGYIVYSTCSVAPEEDELIVNFAIEELGMKAMSVEGYPASNGYIEYYTTRFSN 313
Query: 427 ---GTMRAWPHRHSTIGFFYALLRKD 449
+R +PH+ T GFF LL+K+
Sbjct: 314 DVKNCLRFFPHKQGTEGFFLCLLKKE 339
>pir||G82009 SUN homolog NMA0162 [imported] - Neisseria meningitidis (group A
strain Z2491) >gi|7378933|emb|CAB83476.1| (AL162752) SUN
homolog [Neisseria meningitidis Z2491]
Length = 419
Score = 143 bits (357), Expect = 4e-33
Identities = 89/295 (30%), Positives = 149/295 (50%), Gaps = 18/295 (6%)
Query: 154 KYLAPAWFIERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVV 213
K+ P W++ ++ A+ +++RVN N E +E+L +G+
Sbjct: 142 KHNLPLWWVAYLKNHYPKHWHNIAAALQSHPP-MTLRVNRRHGNAESYLEKLAAEGIAAK 200
Query: 214 RSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGK 273
+ L+ P N F+ G + VQ+ + A+ +LNP+ GE I+D AAPGGK
Sbjct: 201 ALDEYAVTLEEAVPVN--RLPGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGK 258
Query: 274 TTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADR 333
T H+ EL + + A DID R+KR+++ + R+G + D R + D
Sbjct: 259 TGHILELADCR--VTALDIDAGRLKRVEDNIARLGFQTASAACADARDLAAWYDGKPFDT 316
Query: 334 VLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLF 393
+L D PCT+SG +NP+++W R + + A+ Q LL++ + +K GG +L TCS+F
Sbjct: 317 ILADVPCTASGVARRNPDVKWLRRPTDALKTARQQEALLDALWQTLKQGGRMLLATCSVF 376
Query: 394 TEENEENVKWFLNNHQEFKLVHLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
EEN+ ++ FLN H + + P + L P++H GF+YAL++K
Sbjct: 377 VEENDGQLQKFLNRHADAE------PIESRVL------LPNKHQD-GFYYALIQK 418
>pir||G71030 probable nucleolar protein - Pyrococcus horikoshii
>gi|3257964|dbj|BAA30647.1| (AP000006) 312aa long
hypothetical nucleolar protein [Pyrococcus horikoshii]
Length = 312
Score = 143 bits (356), Expect = 5e-33
Identities = 103/306 (33%), Positives = 167/306 (53%), Gaps = 30/306 (9%)
Query: 162 IERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTI 221
+ER K+ +++E+F+ + + S+R+NTLK + E+ + L E ER+P
Sbjct: 15 VERYSKL--DDSEDFWAYLYKPLR-PSIRINTLKGKLNEIKKLLE----EKFELERIPWT 67
Query: 222 LKIKGPY------NFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTT 275
K +G Y N+ ++ G II QE +S + ++L+P+PGE+I+D+AAAPG KTT
Sbjct: 68 -KGEGFYINSYSVNYGELIEYSLGLIIPQEASSMIPPVVLDPKPGELILDMAAAPGSKTT 126
Query: 276 HLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVL 335
+A+ M+N G I A D + R L + R G+ I K ++DG + E+ DR+L
Sbjct: 127 QIAQYMENDGCIIANDAKRDRANILIANLTRAGVLIAKVTVRDGAHYAKY--EDTFDRIL 184
Query: 336 LDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTE 395
LDAPC+S G I KN + K+ ++LQ++L+ +A + +KPGG+L+Y+TC++
Sbjct: 185 LDAPCSSVGMIRKNFKFAKTWSLGKVYYHSRLQKKLILAAYRALKPGGVLVYSTCTVDPL 244
Query: 396 ENEENVKWFLNNHQEFKLVHLNSPY---DPGF----------LEGTMRAWPHRHSTIGFF 442
ENEE V + L + KL +N P +P L+ T+R P + T F+
Sbjct: 245 ENEEVVDYLLQK-TDAKLKKINLPIKSTEPVLEWEGRRYSEELKKTIRIHPQDNDTEAFY 303
Query: 443 YALLRK 448
A + K
Sbjct: 304 IAKIIK 309
>emb|CAA54370.1| (X77091) fmv [Escherichia coli]
Length = 191
Score = 142 bits (355), Expect = 7e-33
Identities = 80/196 (40%), Positives = 118/196 (59%), Gaps = 11/196 (5%)
Query: 255 LNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKP 314
L PQ GE I+DL AAPGGKTTH+ E+ + ++ A DID+ R+ R+ + + R+G+K
Sbjct: 4 LAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKAT-- 60
Query: 315 IIK--DGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELL 372
+K DGR + GE+ DR+LLDAPC+++G I ++P+++W R+ I E+AQLQ E+L
Sbjct: 61 -VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 119
Query: 373 ESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPYDPGFLEGTMRAW 432
++ +K GG L+Y TCS+ EEN +K FL + +L +P PG +
Sbjct: 120 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG-----KQNL 174
Query: 433 PHRHSTIGFFYALLRK 448
P GFFYA L K
Sbjct: 175 PGAEEGDGFFYAKLIK 190
>gi|6324268 90-kDa protein, located in nucleolus, that is homologous to a human
proliferation-associated nucleolar protein, p120; Nop2p
[Saccharomyces cerevisiae]
>gi|730166|sp|P40991|NOP2_YEAST NUCLEOLAR PROTEIN NOP2
>gi|1078161|pir||A55188 nucleolar protein NOP2 - yeast
(Saccharomyces cerevisiae) >gi|576442|emb|CAA57979.1|
(X82656) Nop2p [Saccharomyces cerevisiae]
>gi|1098483|gb|AAA99650.1| (U12141) Ynl2428p
[Saccharomyces cerevisiae] >gi|1301934|emb|CAA95934.1|
(Z71337) ORF YNL061w [Saccharomyces cerevisiae]
>gi|1093321|prf||2103264A nuclear protein [Saccharomyces
cerevisiae]
Length = 618
Score = 142 bits (354), Expect = 9e-33
Identities = 99/300 (33%), Positives = 159/300 (53%), Gaps = 31/300 (10%)
Query: 172 ETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFD 231
E EFF A NE I++R NTLK ++ + L N GV + + + + K+ G FD
Sbjct: 257 EAMEFFEA-NEIARPITIRTNTLKTRRRDLAQTLVNRGVNL---QPIGSWTKV-GLQIFD 311
Query: 232 S------SKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKG 285
S + + G I+Q +S + + L+P E I+D+AAAPGGKTT+++ +MKN G
Sbjct: 312 SQVPIGATPEYLAGHYILQAASSFLPVIALDPHENERILDMAAAPGGKTTYISAMMKNTG 371
Query: 286 KIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGT 345
++A D +K+R K L ++R+G D R+ P+++G DR+LLDAPC+ +G
Sbjct: 372 CVFANDANKSRTKSLIANIHRLGCTNTIVCNYDAREFPKVIGG--FDRILLDAPCSGTGV 429
Query: 346 IGKNPELRWRLRESKIKEMAQLQRELLESAAKLV----KPGGLLLYTTCSLFTEENEENV 401
IGK+ ++ E ++ LQ++LL SA V K GG+++Y+TCS+ EE+E +
Sbjct: 430 IGKDQSVKVSRTEKDFIQIPHLQKQLLLSAIDSVDCNSKHGGVIVYSTCSVAVEEDEAVI 489
Query: 402 KWFLNNHQEFKLV-------------HLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
+ L KLV + + P ++ R +PH ++ GFF A +K
Sbjct: 490 DYALRKRPNVKLVDTGLAIGKEAFTSYRGKKFHPS-VKLARRYYPHTYNVDGFFVAKFQK 548
>emb|CAA58502.1| (X83512) Yna1p [Saccharomyces cerevisiae]
Length = 473
Score = 142 bits (354), Expect = 9e-33
Identities = 99/300 (33%), Positives = 159/300 (53%), Gaps = 31/300 (10%)
Query: 172 ETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFD 231
E EFF A NE I++R NTLK ++ + L N GV + + + + K+ G FD
Sbjct: 112 EAMEFFEA-NEIARPITIRTNTLKTRRRDLAQTLVNRGVNL---QPIGSWTKV-GLQIFD 166
Query: 232 S------SKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKG 285
S + + G I+Q +S + + L+P E I+D+AAAPGGKTT+++ +MKN G
Sbjct: 167 SQVPIGATPEYLAGHYILQAASSFLPVIALDPHENERILDMAAAPGGKTTYISAMMKNTG 226
Query: 286 KIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGT 345
++A D +K+R K L ++R+G D R+ P+++G DR+LLDAPC+ +G
Sbjct: 227 CVFANDANKSRTKSLIANIHRLGCTNTIVCNYDAREFPKVIGG--FDRILLDAPCSGTGV 284
Query: 346 IGKNPELRWRLRESKIKEMAQLQRELLESAAKLV----KPGGLLLYTTCSLFTEENEENV 401
IGK+ ++ E ++ LQ++LL SA V K GG+++Y+TCS+ EE+E +
Sbjct: 285 IGKDQSVKVSRTEKDFIQIPHLQKQLLLSAIDSVDCNSKHGGVIVYSTCSVAVEEDEAVI 344
Query: 402 KWFLNNHQEFKLV-------------HLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
+ L KLV + + P ++ R +PH ++ GFF A +K
Sbjct: 345 DYALRKRPNVKLVDTGLAIGKEAFTSYRGKKFHPS-VKLARRYYPHTYNVDGFFVAKFQK 403
>pir||B75183 probable proliferating-cell nucleolar antigen p120 PAB1947 -
Pyrococcus abyssi (strain Orsay)
>gi|5458055|emb|CAB49545.1| (AJ248284)
proliferating-cell nucleolar antigen P120, putative
[Pyrococcus abyssi]
Length = 311
Score = 142 bits (354), Expect = 9e-33
Identities = 106/306 (34%), Positives = 161/306 (51%), Gaps = 30/306 (9%)
Query: 162 IERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTI 221
+ER K+ +++EEF+ + + S+R+NTLK N++E+ L E E +P
Sbjct: 15 VERYSKL--DDSEEFWAYLYKPLR-PSIRINTLKGNLKEIKALLE----EKFELEPIPWT 67
Query: 222 LKIKGPY------NFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTT 275
K +G Y N+ ++ G II QE +S + ++L+P+P EVI+D+AAAPG KTT
Sbjct: 68 -KGEGFYIKSYDVNYGQLIEYSLGLIIPQEASSMIPPVVLDPKPSEVILDMAAAPGSKTT 126
Query: 276 HLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVL 335
+A+ M+N+G I A D + R L + R G+ I K +KDG E DRVL
Sbjct: 127 QMAQYMENEGCIIANDAKRDRANILIANLTRAGVLIAKVTVKDGAYFARY--ENTFDRVL 184
Query: 336 LDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTE 395
LDAPC+S G I KN + K+ ++LQ+ L+ +A K +KPGG+L+Y+TC++
Sbjct: 185 LDAPCSSVGMIRKNFKFARTWSIGKVYYHSRLQKRLILAAYKSLKPGGVLVYSTCTVDPL 244
Query: 396 ENEENVKWFLNNHQEFKLVHLNSPYDPG-------------FLEGTMRAWPHRHSTIGFF 442
ENEE V FL + KL + P + T+R P + T F+
Sbjct: 245 ENEEVVD-FLLQKTDAKLEKVKLPLKTSEPVIEWEGRKYSDEVRKTIRIHPQDNDTEAFY 303
Query: 443 YALLRK 448
A +RK
Sbjct: 304 IAKIRK 309
>pir||A48998 nucleolar protein p120 - mouse (fragment)
Length = 783
Score = 141 bits (352), Expect = 2e-32
Identities = 102/296 (34%), Positives = 153/296 (51%), Gaps = 22/296 (7%)
Query: 171 NETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEV--VRSERVPTILKIKGPY 228
+E EF A NE I++R NTLK ++ + L N GV + + ++
Sbjct: 241 SELIEFLEA-NEVPRPITLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKSGLVVYDSSV 299
Query: 229 NFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIY 288
++ + G ++Q +S + + L PQ E I+D+ APGGKT+++A+LMKN G I
Sbjct: 300 PIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVIL 359
Query: 289 AFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGK 348
A D + R+K + ++R+G+ DGR+ P+++G DRVLLDAPC+ +G I K
Sbjct: 360 ANDANADRLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGG--FDRVLLDAPCSGTGVISK 417
Query: 349 NPELRWRLRESKIKEMAQLQRELLESAAKLV----KPGGLLLYTTCSLFTEENEENVKWF 404
+P ++ E I+ A LQ+ELL SA V K GG L+Y TCS+ EENE V +
Sbjct: 418 DPAVKTNKDEKDIQRCAHLQKELLLSAIDSVNAASKTGGYLVYCTCSITVEENEWVVDYA 477
Query: 405 LNNHQEFKLVHLNSPY-DPGF-----------LEGTMRAWPHRHSTIGFFYALLRK 448
L + +LV + GF L T R +PH H+ GFF A +K
Sbjct: 478 LKK-RNVRLVPTGLDFGQEGFTRFQARRFHPTLRSTRRFYPHTHNMDGFFIAKFKK 532
>gb|AAA36398.1| (M32110) proliferating cell nuclear protein P120 [Homo sapiens]
Length = 869
Score = 140 bits (349), Expect = 3e-32
Identities = 101/296 (34%), Positives = 152/296 (51%), Gaps = 22/296 (7%)
Query: 171 NETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEV--VRSERVPTILKIKGPY 228
+E EF A NE +++R NTLK ++ + L N GV + + ++
Sbjct: 309 SELVEFLEA-NEVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSV 367
Query: 229 NFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIY 288
++ + G ++Q +S + + L PQ E I+D+ APGGKT+++A+LMKN G I
Sbjct: 368 PIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVIL 427
Query: 289 AFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGK 348
A D + R+K + ++R+G+ DGR+ P+++G DRVLLDAPC+ +G I K
Sbjct: 428 ANDANAERLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGG--FDRVLLDAPCSGTGVISK 485
Query: 349 NPELRWRLRESKIKEMAQLQRELLESAAKLV----KPGGLLLYTTCSLFTEENEENVKWF 404
+P ++ E I A LQ+ELL SA V K GG L+Y TCS+ EENE V +
Sbjct: 486 DPAVKTNKDEKDILRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYA 545
Query: 405 LNNHQEFKLVHLNSPY-DPGF-----------LEGTMRAWPHRHSTIGFFYALLRK 448
L + +LV + GF L T R +PH H+ GFF A +K
Sbjct: 546 LKK-RNVRLVPTGLDFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKK 600
>gi|5453792 nucleolar protein 1 (120kD) [Homo sapiens]
>gi|1171747|sp|P46087|NOL1_HUMAN PROLIFERATING-CELL
NUCLEOLAR ANTIGEN P120 (PROLIFERATION-ASSOCIATED
NUCLEOLAR PROTEIN P120) >gi|482505|pir||A48168
proliferating-cell nucleolar antigen P120 - human
>gi|287723|emb|CAA39119.1| (X55504) P120 antigen [Homo
sapiens]
Length = 855
Score = 140 bits (349), Expect = 3e-32
Identities = 101/296 (34%), Positives = 152/296 (51%), Gaps = 22/296 (7%)
Query: 171 NETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEV--VRSERVPTILKIKGPY 228
+E EF A NE +++R NTLK ++ + L N GV + + ++
Sbjct: 295 SELVEFLEA-NEVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSV 353
Query: 229 NFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIY 288
++ + G ++Q +S + + L PQ E I+D+ APGGKT+++A+LMKN G I
Sbjct: 354 PIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVIL 413
Query: 289 AFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGK 348
A D + R+K + ++R+G+ DGR+ P+++G DRVLLDAPC+ +G I K
Sbjct: 414 ANDANAERLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGG--FDRVLLDAPCSGTGVISK 471
Query: 349 NPELRWRLRESKIKEMAQLQRELLESAAKLV----KPGGLLLYTTCSLFTEENEENVKWF 404
+P ++ E I A LQ+ELL SA V K GG L+Y TCS+ EENE V +
Sbjct: 472 DPAVKTNKDEKDILRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYA 531
Query: 405 LNNHQEFKLVHLNSPY-DPGF-----------LEGTMRAWPHRHSTIGFFYALLRK 448
L + +LV + GF L T R +PH H+ GFF A +K
Sbjct: 532 LKK-RNVRLVPTGLDFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKK 586
>gi|11436286 nucleolar protein 1 (120kD) [Homo sapiens]
Length = 812
Score = 140 bits (349), Expect = 3e-32
Identities = 101/296 (34%), Positives = 152/296 (51%), Gaps = 22/296 (7%)
Query: 171 NETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEV--VRSERVPTILKIKGPY 228
+E EF A NE +++R NTLK ++ + L N GV + + ++
Sbjct: 295 SELVEFLEA-NEVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSV 353
Query: 229 NFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIY 288
++ + G ++Q +S + + L PQ E I+D+ APGGKT+++A+LMKN G I
Sbjct: 354 PIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVIL 413
Query: 289 AFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGK 348
A D + R+K + ++R+G+ DGR+ P+++G DRVLLDAPC+ +G I K
Sbjct: 414 ANDANAERLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGG--FDRVLLDAPCSGTGVISK 471
Query: 349 NPELRWRLRESKIKEMAQLQRELLESAAKLV----KPGGLLLYTTCSLFTEENEENVKWF 404
+P ++ E I A LQ+ELL SA V K GG L+Y TCS+ EENE V +
Sbjct: 472 DPAVKTNKDEKDILRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYA 531
Query: 405 LNNHQEFKLVHLNSPY-DPGF-----------LEGTMRAWPHRHSTIGFFYALLRK 448
L + +LV + GF L T R +PH H+ GFF A +K
Sbjct: 532 LKK-RNVRLVPTGLDFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKK 586
>pir||I40649 hypothetical protein 265 - Coxiella burnetii
>gi|511454|gb|AAA56914.1| (U10529) unknown [Coxiella
burnetii]
Length = 265
Score = 138 bits (344), Expect = 1e-31
Identities = 76/265 (28%), Positives = 151/265 (56%), Gaps = 3/265 (1%)
Query: 187 ISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEE 246
+++RVN K + E +E L + + +P ++++ P + FN+G +Q+
Sbjct: 1 MTLRVNLTKISREIYLEMLDQKNISAKPLDFLPAAIQLEKPCSVHQLPGFNEGYCYIQDA 60
Query: 247 ASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNR 306
A A+ +L + + ++D AAPG KT+H+ E+ + + A D +K R+ R+KE + R
Sbjct: 61 AGQFAAYLLKLENNQTVLDACAAPGSKTSHILEVNPHLKTLVAIDNNKQRLNRIKENITR 120
Query: 307 MGIKI--VKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEM 364
+G++ ++ ++ D + + E+ DR+LLDAPC+++G I ++P+++ + I +
Sbjct: 121 LGLRQEHLQCLLADVSQIDQWSSGELFDRILLDAPCSATGVIRRHPDIKLLRQPGDISQY 180
Query: 365 AQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPYDPGF 424
Q + +LL + ++K GG LLY+TCS+ +ENE+ ++ FL+ H + +L N +
Sbjct: 181 HQKKLQLLNALWTVLKAGGFLLYSTCSVLPDENEKVIEEFLSTHDKVELSPTN-VHGGLQ 239
Query: 425 LEGTMRAWPHRHSTIGFFYALLRKD 449
L+ ++ P + + GF+Y+LL K+
Sbjct: 240 LKYGVQQLPGQDNKDGFYYSLLFKN 264
>pir||F83643 conserved hypothetical protein PA0017 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9945836|gb|AAG03407.1|AE004441_8 (AE004441)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 434
Score = 134 bits (333), Expect = 3e-30
Identities = 80/291 (27%), Positives = 149/291 (50%), Gaps = 3/291 (1%)
Query: 158 PAWFIERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSER 217
P W ++ +++ + + A N +++RVN + + EL G++ +
Sbjct: 143 PRWLLKALKQAWPEQLDALC-AANNAHPPMTLRVNRRHGERDAYLAELAEAGIKARACDY 201
Query: 218 VPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHL 277
+++ P + F +G++ VQ+EA+ +A+ L PG+ ++D APGGKT HL
Sbjct: 202 SRDGIQLAAPRDVRELPGFAEGRVSVQDEAAQLAAEQLESAPGQRVLDACCAPGGKTCHL 261
Query: 278 AELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLD 337
E ++ A D++++R+ R++E + R+G++ + D R E + R+LLD
Sbjct: 262 LETQPELAEVVAVDLEESRLVRVRENLQRLGLQ-ASLVAADARATGEWWDGKPFQRILLD 320
Query: 338 APCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEEN 397
APC+++G I ++P+++ + I +A LQ ELL++ ++ GG+LLY TCS+ EN
Sbjct: 321 APCSATGVIRRHPDIKLARKPEDIAALAHLQGELLDALWPTLEVGGVLLYATCSVMPAEN 380
Query: 398 EENVKWFLNNHQEFKLVHLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
+++ FL + + L P+ G + P GF+YA L K
Sbjct: 381 SDSIAAFLARTPGARELDLPGPWGMKQPHG-RQLLPQVEGHDGFYYAKLIK 430
>gb|AAG19031.1| (AE005002) proliferating-cell nucleolar antigen; Cna [Halobacterium
sp. NRC-1]
Length = 303
Score = 131 bits (327), Expect = 1e-29
Identities = 97/292 (33%), Positives = 143/292 (48%), Gaps = 27/292 (9%)
Query: 175 EFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSK 234
E F A ER +VRVN L + +E L +GV V R E P +L++ D++K
Sbjct: 15 EGFLAACERPLPTTVRVNPLAVTPDRAVEALAAEGVAVDRREWHPGVLEV------DTNK 68
Query: 235 AFNK-----GKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYA 289
N G + QEE S V +L+P+PG+V+ D AAPGGKT +A + + G + A
Sbjct: 69 PGNTWPYVHGWVHGQEEVSCVPPRVLDPEPGDVVWDACAAPGGKTAQIAAEIDDDGLVVA 128
Query: 290 FDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIA--DRVLLDAPCTSSGTIG 347
D + R+ L+ +R+G+ D R+A ++A D L+DAPC+ GTI
Sbjct: 129 NDDNLGRLSALRGNCDRLGVTSAAVTNTDARRATLDAFPDVAAVDAALVDAPCSCEGTIR 188
Query: 348 KNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNN 407
KN + S + + +LQ ++L A L +PGG ++Y+TC+ EENE V L
Sbjct: 189 KNADALDGAGASASRSLGRLQADILARAVALTRPGGTVVYSTCTFAPEENEAVVDEVLGR 248
Query: 408 HQ----EFKLVHLNSP---------YDPGFLEGTMRAWPHRHSTIGFFYALL 446
EF + ++P YD L R +PH + T GFF A L
Sbjct: 249 TDSRLVEFDVGLASAPGLTEWGDASYDDS-LARAQRYYPHHNDTGGFFAAKL 299
>gb|AAF58504.1| (AE003822) CG8545 gene product [Drosophila melanogaster]
Length = 857
Score = 126 bits (314), Expect = 4e-28
Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 21/280 (7%)
Query: 187 ISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTI--LKIKGPYNFDSSKAFNKGKIIVQ 244
+++R NTLK ++ L N GV + + + + ++ + G ++Q
Sbjct: 327 LTIRTNTLKTRRRDLAGALINRGVNLDPLGKWTKVGLVVFNSQVPLGATPEYLAGHYMIQ 386
Query: 245 EEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFV 304
+S + + L PQ E I+D+ +APGGK +H+A +MKN G ++A D ++ R+K +
Sbjct: 387 GASSLLPVMALAPQENERILDMCSAPGGKGSHIASIMKNTGVLFANDSNRDRIKAIVANF 446
Query: 305 NRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEM 364
+R+GI +DG K I+ DRVLLDAPCT +G + K+P ++ E ++
Sbjct: 447 HRLGIVNAVVSCEDGTKFRNIMTG--FDRVLLDAPCTGTGVVSKDPSVKTTKSEVDVQRC 504
Query: 365 AQLQRELLESAAKLV----KPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPY 420
LQR+LL +A GG ++Y+TCS+ EENE + + L + KLV +
Sbjct: 505 YNLQRKLLLTAIDCTDAKSSTGGYIVYSTCSVLPEENEWVIDYALKK-RNVKLVPTGLDF 563
Query: 421 D-PGF-----------LEGTMRAWPHRHSTIGFFYALLRK 448
GF L T R +PH H+ GF+ A L+K
Sbjct: 564 GVEGFTKFRQHRFHPSLNLTKRYYPHTHNMDGFYVAKLKK 603
>pir||A82744 conserved hypothetical protein XF0928 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9105851|gb|AAF83738.1|AE003932_2 (AE003932)
conserved hypothetical protein [Xylella fastidiosa]
Length = 421
Score = 124 bits (309), Expect = 2e-27
Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 6/293 (2%)
Query: 158 PAWFIERVRKILGNETEEFFRA-VNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSE 216
P W ER+R G E F A + W+ RVN + ++ L+ G+E V S
Sbjct: 133 PRWLAERIRADWGELAEAIFDASLKPAPMWL--RVNLRYGDRHTYVQRLQAAGLEAVPSG 190
Query: 217 RVPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTH 276
VP L + F G++ VQ+ ++ + +L+P P ++D AAPGGK H
Sbjct: 191 LVPEALALDCSMPVLQLPGFQAGEVSVQDLSAQQVAALLSPAPHARVLDACAAPGGKAAH 250
Query: 277 LAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLL 336
L E + A D+D R++R+ E +R+ +K + + D E D VLL
Sbjct: 251 LLERAPTLC-LTALDVDMQRLRRVAETCDRIHVK-ARLCVADATDLAAWWDGEAFDAVLL 308
Query: 337 DAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEE 396
DAPC+++G + + P++ R + + +Q LL++ + ++PGG+L+Y TCS+ E
Sbjct: 309 DAPCSATGVVRRQPDVLLHRRAEDLLPLLNIQSRLLDACWRTLRPGGVLVYVTCSVLRAE 368
Query: 397 NEENVKWFLNNHQEFKLVHLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRKD 449
N+ ++ FL + Y G R P GFFYA L K+
Sbjct: 369 NQTQLEAFLARTVDACAEDPGDAYGQPAGLGRQRL-PGEQGGDGFFYARLIKE 420
>pir||T33803 hypothetical protein W07E6.1 - Caenorhabditis elegans (fragment)
>gi|3886025|gb|AAC78177.1| (AF106576) similar to the
nucleolar protein NOF1/NOP2 family [Caenorhabditis
elegans]
Length = 645
Score = 123 bits (306), Expect = 4e-27
Identities = 91/301 (30%), Positives = 150/301 (49%), Gaps = 29/301 (9%)
Query: 170 GNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYN 229
G E EF A N+ +++R N+LK ++ + L N G+ V + + G
Sbjct: 215 GAELLEFLEA-NDNPRPVTIRANSLKVKRRDLAKNLINRGMNVDPAADWTKV----GLVV 269
Query: 230 FDS------SKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKN 283
+DS + + G ++Q S + + L PQPG+ ++D+ +APGGKT+H+A LMKN
Sbjct: 270 YDSQVPVGATPEYLAGHYMIQGLNSLLPVMALAPQPGDRVLDMCSAPGGKTSHIAALMKN 329
Query: 284 KGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSS 343
G ++A D + TR + + ++R+G+ G + +I DR+LLDAPC+ +
Sbjct: 330 SGVLFANDANFTRCRAIIGNLHRLGVNNTVVCNLGGEEFSKIRPNGF-DRILLDAPCSGT 388
Query: 344 GTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKP----GGLLLYTTCSLFTEENEE 399
G I K+ ++ ++ +QR+L+ SA + GG L+Y+TCS+ EENE
Sbjct: 389 GVIWKDQSVKTSKDSQDVQRRHTMQRQLILSALDSLDANSPNGGYLVYSTCSVLVEENEA 448
Query: 400 NVKWFL-NNHQEFKLVHLNSPYDPGF-----------LEGTMRAWPHRHSTIGFFYALLR 447
V + L H E L+ D G+ L T R +PH H+ GF+ A ++
Sbjct: 449 VVNFLLERRHCELVPTGLSIGVD-GYTRFRDYRFHPSLSMTKRYYPHVHNIDGFYVAKIK 507
Query: 448 K 448
K
Sbjct: 508 K 508
>gb|AAF14354.1|AF113138_1 (AF113138) nucleolar protein Nop2 [Eremothecium gossypii]
Length = 240
Score = 123 bits (306), Expect = 4e-27
Identities = 74/210 (35%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 256 NPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPI 315
+P E I+D+AAAPGGKTT+++ +MKN G ++A D +K R K L ++R+G
Sbjct: 1 DPHENERILDMAAAPGGKTTYISAMMKNTGCVFANDANKARTKSLIANIHRLGCTNTIVC 60
Query: 316 IKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESA 375
D R+ P+++G DR+LLDAPC+ +G IGK+ ++ E ++ LQ++L+ SA
Sbjct: 61 NYDAREFPKVIGG--FDRILLDAPCSGTGVIGKDQSVKVNRTEKDFMQIPHLQKQLILSA 118
Query: 376 AKLV----KPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLV-------------HLNS 418
V K GG+++Y+TCS+ EENE V + L KLV +
Sbjct: 119 IDSVDSNSKHGGVIVYSTCSVAVEENEAVVDYALRKRPNVKLVETGLAIGKEGSTSYRGK 178
Query: 419 PYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
+ P + T R +PH ++ GFF A +K
Sbjct: 179 KFHPHY-HLTRRYYPHTYNVDGFFVAKFQK 207
>gb|AAK40477.1| Sun (fmu) protein (sun-2) [Sulfolobus solfataricus]
Length = 368
Score = 121 bits (300), Expect = 2e-26
Identities = 90/307 (29%), Positives = 155/307 (50%), Gaps = 26/307 (8%)
Query: 149 EELEWKYLAPAWFIERVRKILGNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRND 208
E +E K+ P W +++ +L + R + ER WI R+N LK ++++V L +
Sbjct: 74 ENIEIKF--PKWMEDKLFTLL--DVNALKRKLTER--WIWARINLLKTDIDKVYRMLESQ 127
Query: 209 GVEVVRSERVPTILKI-KGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLA 267
+E + ++KI + S K+I+ ++AS++ L P+ E +VDL+
Sbjct: 128 NIEFEPDKDFYYMIKINRSSVRLSSLSIVKDFKLILHDKASSIVVEALKPEISEKLVDLS 187
Query: 268 AAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKI--VKPIIKDGRKAPEI 325
+APG K + L +N+ + + D+D R+ + + R G+ + V I +D K I
Sbjct: 188 SAPGIKASLYMMLTENRAETFLADVDLKRLSKEYNLLKRCGVDLRKVHIIYQDSTKNSII 247
Query: 326 LGEEIADRVLLDAPCTSSGTIGKNPELRWRLRE-SKIKEMAQLQRELLESAAKLVKPGGL 384
+D++LLDAPC+SSG I +P + +LR KI++ +LQ+ LL A K+
Sbjct: 248 K----SDKILLDAPCSSSGMINNDPSILLKLRNGEKIEKFTKLQKSLLNEALKI--KSNK 301
Query: 385 LLYTTCSLFTEENEENVKWFLNNHQEFKLVHLNSPYDPGFL-----EGTMRAWPHRHSTI 439
L+Y CSLF EE E+ ++ + ++ S Y G+ + + R +PH ST
Sbjct: 302 LVYAVCSLFPEEGEKVIEDYYEIAEK-----PFSNYQSGYSLFKSGKRSNRTFPHIDSTE 356
Query: 440 GFFYALL 446
GFF + L
Sbjct: 357 GFFISTL 363
>pir||C81412 NOL1/NOP2/sun family protein Cj0636 [imported] - Campylobacter
jejuni (strain NCTC 11168) >gi|6968103|emb|CAB75272.1|
(AL139075) NOL1\NOP2\sun family protein [Campylobacter
jejuni]
Length = 279
Score = 119 bits (295), Expect = 7e-26
Identities = 74/227 (32%), Positives = 127/227 (55%), Gaps = 8/227 (3%)
Query: 187 ISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEE 246
+ V NTLK ++EE+ +E ++ + + K S KAFN+ +Q
Sbjct: 14 VCVFANTLKTSIEELEKEFLKQNLKFKKINVYCYLFDAKDKAILSSMKAFNEAHFYIQNY 73
Query: 247 ASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNR 306
+S + +L L + G+ ++D+ AAPGGK+ +LA M+N G + ++ + R L++ +
Sbjct: 74 SSYLCALNLEVKAGQSVLDMCAAPGGKSINLANFMQNTGYLACNEMSRDRFFILQKNLKN 133
Query: 307 MGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQ 366
G+ K +KDG+ + + D++LLDAPC++ IG + E ++ +IK +A+
Sbjct: 134 YGVN-AKVFMKDGKNIGNLCPLKF-DKILLDAPCSTFAKIGFDLEKSYK----EIKNIAK 187
Query: 367 LQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKL 413
Q++LL SA K +K GG L+Y+TC+ EENEE ++ L + EFKL
Sbjct: 188 TQKKLLHSALKALKIGGELVYSTCTFTKEENEEVIENALKS--EFKL 232
>pir||C64945 probable rRNA methylase yebU - Escherichia coli
>gi|1736482|dbj|BAA15648.1| (D90827) Proliferating-cell
nucleolar antigen P120 (Proliferation-associated
nucleolar protein P120). [Escherichia coli]
>gi|1788140|gb|AAC74905.1| (AE000278) putative nucleolar
proteins [Escherichia coli K12]
Length = 481
Score = 117 bits (291), Expect = 2e-25
Identities = 94/314 (29%), Positives = 151/314 (47%), Gaps = 35/314 (11%)
Query: 158 PAWFIERVRKILGNETE-EFFRAVNERQEWISVRVNTLKANVEEVIEELRNDG------- 209
P F+ ++R+ + + + F A +R S+RVNTLK +V + ++ G
Sbjct: 11 PDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPIP 70
Query: 210 -------VEVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEASA--VASLILNPQPG 260
+E + +P S+ G +QE +S VA+L +
Sbjct: 71 WCEEGFWIERDNEDALP----------LGSTAEHLSGLFYIQEASSMLPVAALFADGNAP 120
Query: 261 EVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGR 320
+ ++D+AAAPG KTT ++ M N+G I A + +R+K L ++R GI V DGR
Sbjct: 121 QRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGR 180
Query: 321 KAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVK 380
+ E+ D +LLDAPC+ G + K+P+ +E+A QREL++SA ++
Sbjct: 181 VFGAAV-PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALR 239
Query: 381 PGGLLLYTTCSLFTEENEENVKWFLNNHQE-FKLVHLNSPYDPG-----FLEGTMRAWPH 434
PGG L+Y+TC+L EENE W + + + + L + PG EG + +P
Sbjct: 240 PGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLF-PGANKALTEEGFLHVFPQ 298
Query: 435 RHSTIGFFYALLRK 448
+ GFF A LRK
Sbjct: 299 IYDCEGFFVARLRK 312
>sp|P76273|YEBU_ECOLI HYPOTHETICAL 53.2 KD PROTEIN IN PRC-PRPA INTERGENIC REGION
Length = 479
Score = 117 bits (291), Expect = 2e-25
Identities = 94/314 (29%), Positives = 151/314 (47%), Gaps = 35/314 (11%)
Query: 158 PAWFIERVRKILGNETE-EFFRAVNERQEWISVRVNTLKANVEEVIEELRNDG------- 209
P F+ ++R+ + + + F A +R S+RVNTLK +V + ++ G
Sbjct: 9 PDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPIP 68
Query: 210 -------VEVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEASA--VASLILNPQPG 260
+E + +P S+ G +QE +S VA+L +
Sbjct: 69 WCEEGFWIERDNEDALP----------LGSTAEHLSGLFYIQEASSMLPVAALFADGNAP 118
Query: 261 EVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGR 320
+ ++D+AAAPG KTT ++ M N+G I A + +R+K L ++R GI V DGR
Sbjct: 119 QRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGR 178
Query: 321 KAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVK 380
+ E+ D +LLDAPC+ G + K+P+ +E+A QREL++SA ++
Sbjct: 179 VFGAAV-PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALR 237
Query: 381 PGGLLLYTTCSLFTEENEENVKWFLNNHQE-FKLVHLNSPYDPG-----FLEGTMRAWPH 434
PGG L+Y+TC+L EENE W + + + + L + PG EG + +P
Sbjct: 238 PGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLF-PGANKALTEEGFLHVFPQ 296
Query: 435 RHSTIGFFYALLRK 448
+ GFF A LRK
Sbjct: 297 IYDCEGFFVARLRK 310
>pir||T08926 hypothetical protein T15N24.50 - Arabidopsis thaliana
>gi|7228247|emb|CAB77061.1| (AL078465) putative protein
[Arabidopsis thaliana] >gi|7269512|emb|CAB79515.1|
(AL161565) putative protein [Arabidopsis thaliana]
Length = 626
Score = 116 bits (288), Expect = 5e-25
Identities = 88/282 (31%), Positives = 137/282 (48%), Gaps = 39/282 (13%)
Query: 182 ERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTI--LKIKGPYNFDSSKAFNKG 239
E++ S+R NTLK ++ + L N GV + + + + ++ + G
Sbjct: 263 EKKRPTSIRTNTLKTRRRDLADILLNRGVNLDPLSKWSKVGLIVYDSQVPIGATPEYLAG 322
Query: 240 KIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKR 299
++Q +S + + L P+ E +VD+AAAPGGKTT++A LMKN G IYA ++ R+K
Sbjct: 323 FYMLQSASSFLPVMALAPREKERVVDMAAAPGGKTTYVAALMKNTGIIYANEMKVPRLKS 382
Query: 300 LKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRES 359
L ++RMG+ DGR+ I K+ ++
Sbjct: 383 LSANLHRMGVTNTIVCNYDGRE-----------------------VISKDESVKTSKSAD 419
Query: 360 KIKEMAQLQRELLESAAKLV----KPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVH 415
IK+ A LQ++L+ A LV K GG ++Y+TCS+ ENE + + L N ++ KLV
Sbjct: 420 DIKKFAHLQKQLILGAIDLVDANSKTGGYIVYSTCSVMIPENEAVIDYALKN-RDVKLVP 478
Query: 416 LNSPYD-PGF--------LEGTMRAWPHRHSTIGFFYALLRK 448
+ PGF LE T R +PH H+ GFF A L+K
Sbjct: 479 CGLDFGRPGFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKK 520
>pir||A82193 Sun/nucleolar protein family protein VC1502 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9656005|gb|AAF94657.1| (AE004228) Sun/nucleolar
protein family protein [Vibrio cholerae]
Length = 503
Score = 116 bits (287), Expect = 6e-25
Identities = 95/303 (31%), Positives = 146/303 (47%), Gaps = 14/303 (4%)
Query: 158 PAWFIERVRKILGNETE-EFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSE 216
P FI + KIL + T+ F A +R S+RVNTLK +V E + ++
Sbjct: 38 PEPFIASMAKILPDPTQLADFIAACQRPLRKSIRVNTLKISVAEFCQRAAEKEWQLTPVP 97
Query: 217 RVPTILKIKGPYNF---DSSKAFNKGKIIVQEEASA--VASLILNPQPGEVIVDLAAAPG 271
I + ++ G +QE +S V++L + + ++D+AAAPG
Sbjct: 98 WCENGFWIDADESLVPLGNTAEHMAGLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPG 157
Query: 272 GKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIA 331
KTT +A LM N+G + A + +R+K L + R GI+ DG L E
Sbjct: 158 SKTTQMAALMDNQGVLVANEFSASRVKVLHANIERCGIRNTALSNFDGCVFGGWLPERF- 216
Query: 332 DRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCS 391
D VL+DAPC+ GTI K+P+ I+ +A Q+ L+ESA + +K GG L+Y+TC+
Sbjct: 217 DAVLIDAPCSGEGTIRKDPDAMKNWSLESIQSIANTQKALIESAFQALKVGGTLVYSTCT 276
Query: 392 LFTEENEENVKWFLNN--HQEFKLVHLNSPYDPGFL----EGTMRAWPHRHSTIGFFYAL 445
L EEN++ V W L L + ++ L EG + +P + GFF A
Sbjct: 277 LSREENQQ-VCWHLKQTYGDAVSFESLGNLFEHASLALTEEGFLHIFPQMYDCEGFFVAK 335
Query: 446 LRK 448
+RK
Sbjct: 336 IRK 338
>sp|P71675|YE07_MYCTU HYPOTHETICAL 48.5 KDA PROTEIN RV1407 >gi|7445108|pir||D70901
probable fmu protein - Mycobacterium tuberculosis
(strain H37RV) >gi|1542915|emb|CAB02186.1| (Z80108) fmu
[Mycobacterium tuberculosis]
Length = 457
Score = 113 bits (279), Expect = 6e-24
Identities = 126/460 (27%), Positives = 195/460 (42%), Gaps = 56/460 (12%)
Query: 28 IKPSQYAKREAFKKHEVEEAWLNRVL-----------------TMIFYDIMKKQGLIDRA 70
+ P++ A E + +A+ N VL T + Y + +GL+D
Sbjct: 13 LDPARRAAFETLRAVSARDAYANLVLPALLAQRGIGGRDAAFATELTYGTCRARGLLDAV 72
Query: 71 IQDIVGVNPLILDPWLRAALRVAVDIFL-----FHEPSSQTIKNLRWKGSDFISSRTHPY 125
I +P +DP L LR+ L H S T++ G +F S+R
Sbjct: 73 IGAAAERSPQAIDPVLLDLLRLGTYQLLRTRVDAHAAVSTTVEQA---GIEFDSARAGFV 129
Query: 126 VGMYFW----DTIDRIMQYKPNPRNE-LEELEWKYLAPAWFIERVRKILG---NETEEFF 177
G+ D + + P+ +N+ + + + P W + LG E E
Sbjct: 130 NGVLRTIAGRDERSWVGELAPDAQNDPIGHAAFVHAHPRWIAQAFADALGAAVGELEAVL 189
Query: 178 RAVNERQE-WISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAF 236
+ +ER ++ R L A E+ +R V R L P +
Sbjct: 190 ASDDERPAVHLAARPGVLTAG--ELARAVRGT---VGRYSPFAVYLPRGDPGRLAPVR-- 242
Query: 237 NKGKIIVQEEASAVAS--LILNPQPGEV--IVDLAAAPGGKTTHLAEL-MKNKGKIYAFD 291
G+ +VQ+E S + + L L P G+ +DL A PGGKT LA L ++ ++ A +
Sbjct: 243 -DGQALVQDEGSQLVARALTLAPVDGDTGRWLDLCAGPGGKTALLAGLGLQCAARVTAVE 301
Query: 292 IDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPE 351
R + + + +++++ DGR G DRVL+DAPCT G + + PE
Sbjct: 302 PSPHRADLVAQNTRGLPVELLRV---DGRHTDLDPG---FDRVLVDAPCTGLGALRRRPE 355
Query: 352 LRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEF 411
RWR + + + +A+LQRELL +A L +PGG++LY TCS E V L H
Sbjct: 356 ARWRRQPADVAALAKLQRELLSAAIALTRPGGVVLYATCSPHLAETVGAVADALRRHPVH 415
Query: 412 KL--VHLNSPYDPGFLEGT-MRAWPHRHSTIGFFYALLRK 448
L L P G EG ++ WPHRH T F A LR+
Sbjct: 416 ALDTRPLFEPVIAGLGEGPHVQLWPHRHGTDAMFAAALRR 455
>gb|AAF51875.1| (AE003599) CG11109 gene product [Drosophila melanogaster]
Length = 358
Score = 111 bits (276), Expect = 1e-23
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 28/232 (12%)
Query: 242 IVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRL- 300
++Q S V +L+PQPGE I+D+ AAPG KT+H+AELM ++G + A D +R++ +
Sbjct: 129 LLQNLPSIVCVRVLDPQPGERILDMCAAPGNKTSHIAELMGDRGSVVALDNSASRVRSML 188
Query: 301 -----KEFVNRMGIKIVKPIIKDGRKAP--EILGE----EIADRVLLDAPCTSSGTIGKN 349
+ + + + D AP E G E DR+LLDAPC+ +G
Sbjct: 189 PKLGHYKSITAHVFNSTEAVAADAPSAPVGEFTGPPFPCESFDRILLDAPCSG---LGNR 245
Query: 350 PELRWRLRESKI-KEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNH 408
P+L +++ K+ +QR L E A +LV+PGG+L+Y+TC++ +E E V W L
Sbjct: 246 PQLSCSIKQVKVLSSYPHIQRRLFEQAVQLVRPGGILVYSTCTVTEDECECLVAWALRKF 305
Query: 409 QEFKLVHLNSPYD------PGFLEGTMRAWPH------RHSTIGFFYALLRK 448
E +L + PGF R T+GFF A +K
Sbjct: 306 VELRLTDATPRWGGPGLPLPGFEACKSRLLQRFGPSGANADTVGFFIAKFQK 357
>gi|8922322 hypothetical protein FLJ10267 [Homo sapiens]
>gi|7022196|dbj|BAA91515.1| (AK001129) unnamed protein
product [Homo sapiens]
Length = 429
Score = 104 bits (258), Expect = 2e-21
Identities = 86/290 (29%), Positives = 137/290 (46%), Gaps = 33/290 (11%)
Query: 189 VRVNTLKANVEEVIEELRNDGVEVV-RSERVPTILKIKGPY-----------------NF 230
VRVNTLK ++V++ + G R+ + + +KG + +
Sbjct: 138 VRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDL 197
Query: 231 DSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAF 290
+ G +I+Q+ AS + +++L+P PG ++D AAPG KT+HLA L+KN+GKI+AF
Sbjct: 198 HEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAF 257
Query: 291 DIDKTRMKRLKEFVNRMGIKIVKPIIKDG-RKAPEILGEEIADRVLLDAPCTSSGTIGKN 349
D+D R+ + + R G+ + +D +P +LLD C+ SG +
Sbjct: 258 DLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQ 317
Query: 350 PELRWRLRESKIK--EMAQLQRELLESAAKLVKPG-GLLLYTTCSLFTEENEENVKWFL- 405
E S ++ +A Q+ L A L P L+Y+TCSL EENE+ V+ L
Sbjct: 318 LEEPGAGTPSPVRLHALAGFQQRALCHA--LTFPSLQRLVYSTCSLCQEENEDVVRDALQ 375
Query: 406 NNHQEFKLV-------HLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
N F+L H PG E +RA P + GFF A++ +
Sbjct: 376 QNPGAFRLAPALPAWPHRGLSTFPG-AEHCLRASPETTLSSGFFVAVIER 424
>emb|CAB76894.1| (AL159139) hypothetical protein SCL6.29c [Streptomyces coelicolor
A3(2)]
Length = 475
Score = 104 bits (258), Expect = 2e-21
Identities = 121/456 (26%), Positives = 184/456 (39%), Gaps = 31/456 (6%)
Query: 13 KGIRAIIEAIRLGEVIKPSQYAKREAFKKHEVEEAWLNRVLTMIFYDIMKKQGLIDRAIQ 72
+ +RA+ E ++ P K + E +A + T + Y +++QG D I
Sbjct: 29 EALRAVDERDAYANLVLPPLLRKAREKEGPEKFDARDAALATELVYGTLRRQGTYDAIIA 88
Query: 73 DIVGVNPLILDPWLRAALRVAVDIFL-----FHEPSSQTIKNLRWKGSDFISSRTHPYVG 127
D V +DP + L + V L H S +++ R D + + +
Sbjct: 89 DCVDRPLREVDPPVLDVLSLGVHQLLGTRIPSHAAVSASVELARVVLGDGRAKFVNAVLR 148
Query: 128 MYFWDTIDRIMQYKPNPRNELEE--LEWKYLAPAWFIERVRKILGNET---EEFFRAVNE 182
D +D ++ P +E E L + P W + + LG EE A NE
Sbjct: 149 KVARDDLDGWLERVAPPYDEDPEDHLAVVHSHPRWVVSALWDSLGGGRAGIEELLAADNE 208
Query: 183 RQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGKII 242
R E +++ +A EE++ E V P +++ + A + +
Sbjct: 209 RPE-VTLVARPGRATREELLGE-----EAAVPGRWSPYAVRLSEGGEPGAVDAVRENRAG 262
Query: 243 VQEEASAVASLILNPQP----GEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMK 298
VQ+E S + +L L P +D A PGGK L L +G AF + +
Sbjct: 263 VQDEGSQLVALALANAPLDGPDRRWLDGCAGPGGKAALLGALAAERG---AFLLASEKQP 319
Query: 299 RLKEFVNRMGIKIVKP---IIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWR 355
V R P I DG + G DRVL+D PCT G + + PE RWR
Sbjct: 320 HRAGLVARALDGNPGPYQVIAADGTRPAWRPGS--FDRVLVDVPCTGLGALRRRPEARWR 377
Query: 356 LRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVH 415
R + A LQR LL +A + V+ GG++ Y TCS E V L H +L+
Sbjct: 378 RRPEDLDGFAPLQRGLLRNALEAVRVGGVVAYATCSPHLAETRAVVTDVLKQHPGTELLD 437
Query: 416 LNS--PYDPGFLEG-TMRAWPHRHSTIGFFYALLRK 448
P PG EG ++ WPH H T + ALLR+
Sbjct: 438 ARPLLPGVPGLGEGPDVQLWPHVHGTDAMYLALLRR 473
>gb|AAK40701.1| Sun (fmu) protein (sun-1) [Sulfolobus solfataricus]
Length = 327
Score = 101 bits (250), Expect = 1e-20
Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 26/212 (12%)
Query: 239 GKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMK 298
G I VQ +AS + +L+P P E IVD+ A GGK TH+ +L + + K+ FD + +++
Sbjct: 138 GLIYVQGKASMYVAHLLDPHPNEKIVDMTAYAGGKLTHIYQL-EPRVKLIGFDHTEKKVE 196
Query: 299 RLKEFVNRMGIKIVKPIIK-DGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLR 357
+L++ N+MG++I I K D R E D+V++D PC++ +G P+L
Sbjct: 197 KLRDLANKMGMRI--EIYKADSRYLYEDYKIGDVDKVVIDPPCSA---LGIRPKLYDHKT 251
Query: 358 ESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHLN 417
+ I + Q++ L SA K++K G+++Y+TC++ T ENE+ +
Sbjct: 252 KQDILNFHKYQKQFLNSAYKILKKNGVVIYSTCTVTTWENEKVIN--------------- 296
Query: 418 SPYDPGF-LEGTMRAWPHRHSTIGFFYALLRK 448
DP F +E +R PH H GFF A L K
Sbjct: 297 ---DPRFSVEYEIRFHPHIHEITGFFIAKLIK 325
>pir||C72710 probable fmu protein APE1098 - Aeropyrum pernix (strain K1)
>gi|5104768|dbj|BAA80083.1| (AP000060) 388aa long
hypothetical fmu protein [Aeropyrum pernix]
Length = 388
Score = 101 bits (248), Expect = 2e-20
Identities = 78/222 (35%), Positives = 117/222 (52%), Gaps = 20/222 (9%)
Query: 236 FNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKT 295
F +G + Q S + L+P+PG V+VDL AAPGGK +H+A+L + I A D +
Sbjct: 177 FREGLVYGQSVTSMYVARALDPRPGWVVVDLNAAPGGKVSHVAQLAGREAVIVAID-RPS 235
Query: 296 RMKRLKEFVNRMGIKIVKPIIKDGRKAPEILG--EEIADRVLLDAPCTSSGTIGKNPELR 353
++ RL+E + R+G V+ + D R+A +L D VL+D PCT+ G I K +++
Sbjct: 236 KVGRLRETLERLGAGWVRVVGGDSRRASRLLPGLAGRVDAVLVDPPCTNIGVIPKVFDVK 295
Query: 354 WRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKL 413
LR+S ++ Q +E A +L++ GGLL Y+TC+L + ENE V F+L
Sbjct: 296 -TLRDS--AAASRYQWMFVEEAWRLLRRGGLLAYSTCTLSSLENELIVA--RAEELGFRL 350
Query: 414 VHLNSPYDPGFLEGT-MRAW------PHRHSTIGFFYALLRK 448
+ G R+W PHR T GFF A+L K
Sbjct: 351 T-----WSWGLRPSRGRRSWLGFRWEPHRDGTPGFFLAILEK 387
>gi|11419358 hypothetical protein FLJ10267 [Homo sapiens]
Length = 382
Score = 98.7 bits (242), Expect = 1e-19
Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 24/236 (10%)
Query: 189 VRVNTLKANVEEVIEELRNDGVEVV-RSERVPTILKIKGPY-----------------NF 230
VRVNTLK ++V++ + G R+ + + +KG + +
Sbjct: 138 VRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDL 197
Query: 231 DSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAF 290
+ G +I+Q+ AS + +++L+P PG ++D AAPG KT+HLA L+KN+GKI+AF
Sbjct: 198 HEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAF 257
Query: 291 DIDKTRMKRLKEFVNRMGIKIVKPIIKDG-RKAPEILGEEIADRVLLDAPCTSSGTIGKN 349
D+D R+ + + R G+ + +D +P +LLD C+ SG +
Sbjct: 258 DLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQ 317
Query: 350 PELRWRLRESKIK--EMAQLQRELLESAAKLVKPG-GLLLYTTCSLFTEENEENVK 402
E S ++ +A Q+ L A L P L+Y+TCSL EENE+ V+
Sbjct: 318 LEEPGAGTPSPVRLHALAGFQQRALCHA--LTFPSLQRLVYSTCSLCQEENEDVVR 371
>gb|AAF55643.1| (AE003725) CG5558 gene product [alt 2] [Drosophila melanogaster]
Length = 383
Score = 96.0 bits (235), Expect = 8e-19
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 14/221 (6%)
Query: 240 KIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKR 299
+ I+Q +A+ +A+ +L P G ++D+ AAPG KT H+ +M+NKG IY+ + D R
Sbjct: 158 RFILQNKATCLAAELLAPPSGATVLDMCAAPGMKTVHICNVMQNKGCIYSVEQDHVRYNT 217
Query: 300 LKEFVNRMGIKIVKPIIKDG-RKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRE 358
L E G IVKPI+ D PE + + +L+D C+ SG + +
Sbjct: 218 LCEITKDAGCDIVKPILGDALNLTPERFPD--VEYILVDPSCSGSGMQNRMTVCDEPKED 275
Query: 359 SKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLV---- 414
+++++ LQ ++L A + Y TCSL+ EENE+ V+ L + FKL+
Sbjct: 276 KRLQKLQGLQIKILSHAMGAFPNVKRIAYCTCSLWKEENEQVVQRCLQLNPSFKLLSCKK 335
Query: 415 -------HLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
++ P + + P T G F AL K
Sbjct: 336 ALRNKWHNVGDKDYPNIGKNVLYCQPDSDLTDGIFLALFEK 376
>gb|AAF55642.1| (AE003725) CG5558 gene product [alt 1] [Drosophila melanogaster]
Length = 433
Score = 96.0 bits (235), Expect = 8e-19
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 14/221 (6%)
Query: 240 KIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKR 299
+ I+Q +A+ +A+ +L P G ++D+ AAPG KT H+ +M+NKG IY+ + D R
Sbjct: 208 RFILQNKATCLAAELLAPPSGATVLDMCAAPGMKTVHICNVMQNKGCIYSVEQDHVRYNT 267
Query: 300 LKEFVNRMGIKIVKPIIKDG-RKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRE 358
L E G IVKPI+ D PE + + +L+D C+ SG + +
Sbjct: 268 LCEITKDAGCDIVKPILGDALNLTPERFPD--VEYILVDPSCSGSGMQNRMTVCDEPKED 325
Query: 359 SKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEFKLV---- 414
+++++ LQ ++L A + Y TCSL+ EENE+ V+ L + FKL+
Sbjct: 326 KRLQKLQGLQIKILSHAMGAFPNVKRIAYCTCSLWKEENEQVVQRCLQLNPSFKLLSCKK 385
Query: 415 -------HLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
++ P + + P T G F AL K
Sbjct: 386 ALRNKWHNVGDKDYPNIGKNVLYCQPDSDLTDGIFLALFEK 426
>gi|11545785 hypothetical protein FLJ22609 [Homo sapiens]
>gi|10439061|dbj|BAB15417.1| (AK026262) unnamed protein
product [Homo sapiens]
Length = 340
Score = 91.3 bits (223), Expect = 2e-17
Identities = 59/177 (33%), Positives = 100/177 (56%), Gaps = 7/177 (3%)
Query: 237 NKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTR 296
N K + AS + L L + GE ++DL AAPGGK+ L + G ++ + D R
Sbjct: 109 NLKKYYLLNAASLLPVLALELRDGEKVLDLCAAPGGKSIALLQCAC-PGYLHCNEYDSLR 167
Query: 297 MKRLKE----FVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGT-IGKNPE 351
++ L++ F+ + I ++K DGRK + E+ D+VL+DAPC++ + + +
Sbjct: 168 LRWLRQTLESFIPQPLINVIKVSELDGRKMGDAQ-PEMFDKVLVDAPCSNDRSWLFSSDS 226
Query: 352 LRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNH 408
+ R S+ + + LQ ELL SA K ++PGG+L+Y+TC+L EN++ + LN+H
Sbjct: 227 QKASCRISQRRNLPLLQIELLRSAIKALRPGGILVYSTCTLSKAENQDVISEILNSH 283
>pir||T38517 hypothetical protein SPAC2C4.06c - fission yeast
(Schizosaccharomyces pombe) >gi|2414617|emb|CAB16366.1|
(Z99259) hypothetical protein [Schizosaccharomyces
pombe]
Length = 455
Score = 88.5 bits (216), Expect = 1e-16
Identities = 77/288 (26%), Positives = 128/288 (43%), Gaps = 32/288 (11%)
Query: 189 VRVNTLKANVEEVIEELRNDGVEVVRS---------ERVPTILKIKGPYNFDSSKAFNKG 239
+R+NT+K+ +EV++ L D V + + V ++ I + + + +G
Sbjct: 129 LRINTIKSTKDEVLQGLGLDKVSSIEELGPDKFYIDDCVENLIAIDPSFPIVENSLYKEG 188
Query: 240 KIIVQEEASAVASLILNPQPGEV--IVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRM 297
K+I+Q++AS + +L G V I+D AAPG KTTHLA K I+AF+ D R+
Sbjct: 189 KVIIQDKASCFPAAVLAGLTGHVGDIIDGCAAPGNKTTHLAACFP-KSHIFAFERDAKRV 247
Query: 298 KRLKEFVNRMGIKIVKPIIKDGRKA-PEILGEEIADRVLLDAPCTSSGTIGKNPELRWRL 356
+ L++ V G V +D P+ +LLD C+ SG + + L
Sbjct: 248 QTLRKMVGISGANNVTIEHQDFTLTDPKSDLYRNVTHILLDPSCSGSGIVSRQDYLLGNE 307
Query: 357 RE-----SKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEF 411
++ +++ + Q +L+ A + + Y+TCS+ ENE+ V L+ ++
Sbjct: 308 QDVTEDTERLENLCSFQSTILKHALQFPNCRH-VTYSTCSVHRLENEQVVCEVLSQEPDW 366
Query: 412 KLVHLNSPY-------------DPGFLEGTMRAWPHRHSTIGFFYALL 446
K L P EG +R P TIGFF A L
Sbjct: 367 KCNSLTKTLPNWKTRGIPEYCAQPSMAEGMIRCKPGAGGTIGFFVANL 414
>pir||F72048 RNA methyltransferase - Chlamydophila pneumoniae (strain CWL029)
>gi|4376975|gb|AAD18813.1| (AE001650) RNA
Methyltransferase [Chlamydophila pneumoniae CWL029]
>gi|8163359|gb|AAF73625.1| (AE002170) Nol1/Nop2/Sun
family protein [Chlamydophila pneumoniae AR39]
>gi|8979046|dbj|BAA98881.1| (AP002547) RNA
methyltransferase [Chlamydophila pneumoniae J138]
Length = 364
Score = 86.6 bits (211), Expect = 5e-16
Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 15/234 (6%)
Query: 170 GNETEEFFRAVNERQEWISVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYN 229
G E E + + I++RVNT K +V+E+ E+L +P L +
Sbjct: 114 GEEQAEEIAKIWLTEAPITIRVNTDKISVKELQEKLEYPS----SPGELPEALHFSKRHP 169
Query: 230 FDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYA 289
S++AF +G +Q+E S S ++ ++++D A GGK+ A+ K+ +
Sbjct: 170 LQSTEAFRRGFFEIQDENSQRISQGISLTDKDIVLDFCAGAGGKSLIFAQKAKH---VVI 226
Query: 290 FDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKN 349
D K ++ K + R G + + D + V++DAPC+ +G ++
Sbjct: 227 NDSRKAILQTAKHRLLRAGARNFS--LADQLRLGSF------SVVIVDAPCSGTGVFRRH 278
Query: 350 PELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKW 403
PE +W+ + + ++Q+ +L+ A+ V P G L+Y TCSL EENE +V +
Sbjct: 279 PEHKWQFSKKLLLNYVRVQKSILKQASAYVGPRGRLVYITCSLLKEENEAHVAY 332
>pir||A71500 probable RNA methyltransferase - Chlamydia trachomatis (serotype
D, strain UW3/Cx) >gi|3328993|gb|AAC68155.1| (AE001326)
RNA Methyltransferase [Chlamydia trachomatis]
Length = 325
Score = 84.3 bits (205), Expect = 3e-15
Identities = 56/216 (25%), Positives = 107/216 (48%), Gaps = 14/216 (6%)
Query: 188 SVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEA 247
S+RVNT + +V+++ + L + P+ L+ + Y ++AF +G +Q+E+
Sbjct: 89 SIRVNTRRISVDKLQKVLPFP----CQRGAAPSSLRFEKRYPLQHTRAFRRGLFEIQDES 144
Query: 248 SAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRM 307
S + + + + + ++D A GGK+ A+ ++ + +R + L+E +R+
Sbjct: 145 SQIITNAILIKDSDTVLDFCAGAGGKSLIFAQRARH------VTLHDSRPQALEEARHRL 198
Query: 308 GIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQL 367
+ IK+ + L + V++DAPCT SG ++PE + + + +
Sbjct: 199 S----RSGIKNFTIPSQPLKKHSFSLVVVDAPCTGSGVFRRHPEKKLLFSKQLLHNNSIA 254
Query: 368 QRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKW 403
Q +L+ A V P G L+Y TCSL EENE++ W
Sbjct: 255 QERILKEALAYVAPCGRLVYITCSLMKEENEKHTSW 290
>gb|AAF73608.1| (AE002350) Nol1/Nop2/Sun family protein [Chlamydia muridarum]
Length = 368
Score = 84.3 bits (205), Expect = 3e-15
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 188 SVRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEA 247
S+RVNT + +V+++ E L + P+ L+ Y ++AF +G +Q+E+
Sbjct: 132 SIRVNTRRISVDKLQEVLPFSS----QRGAAPSSLRFDKRYPLQHTRAFRRGLFEIQDES 187
Query: 248 SAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRM 307
S + + + + + ++D A GGK+ A+ ++ + D ++ ++ ++R
Sbjct: 188 SQIITNAILVKDSDTVLDFCAGAGGKSLIFAQRAQH---VTLHDSRPQALEEARQRLSRS 244
Query: 308 GIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQL 367
GIK + A L + V++DAPCT SG ++PE + + +K +
Sbjct: 245 GIK-------NFTIASLPLKQHGFSLVVVDAPCTGSGVFRRHPEKKLLFSKQLLKNNSVA 297
Query: 368 QRELLESAAKLVKPGGLLLYTTCSLFTEENEEN 400
Q ++L+ A V P G L+Y TCSL EENE++
Sbjct: 298 QGKILKQAQTYVAPRGRLVYITCSLLKEENEKH 330
>pir||F75306 probable sun protein - Deinococcus radiodurans (strain R1)
>gi|6459968|gb|AAF11717.1|AE002050_3 (AE002050) sun
protein, putative [Deinococcus radiodurans]
Length = 439
Score = 83.9 bits (204), Expect = 3e-15
Identities = 67/217 (30%), Positives = 99/217 (44%), Gaps = 7/217 (3%)
Query: 232 SSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFD 291
+++AF +G+ AS L G ++DLA G K LA ++ + D
Sbjct: 228 ATRAFMQGQAQPINPASLACVDALGDVAGVRVLDLAGGMGIKAAMLAT---RGAEVTSVD 284
Query: 292 IDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGTIGKNPE 351
+ + + + R+G+ + P L A VLLDAPCT SGT+ +PE
Sbjct: 285 VVARKHDAARANLKRLGLHA--EFLTHDLTTP--LDLPPAPAVLLDAPCTGSGTLRSHPE 340
Query: 352 LRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWFLNNHQEF 411
++ RL + E A LQ ++L +AA LV PGG+L+Y+ CS+ +E V FL H EF
Sbjct: 341 IKLRLTPDAVAEAAALQAQMLPNAAALVAPGGVLVYSVCSVTKQEGPGVVADFLAAHPEF 400
Query: 412 KLVHLNSPYDPGFLEGTMRAWPHRHSTIGFFYALLRK 448
+ + P G GFF A LRK
Sbjct: 401 QPESVPELDVPHVAAGAGVLTVPLGGVDGFFIARLRK 437
>emb|CAB70100.1| (AL132949) contains similarity to Pfam domain: PF01189
(NOL1/NOP2/sun family), Score=57.3, E-value=3e-16, N=2
[Caenorhabditis elegans]
Length = 792
Score = 83.5 bits (203), Expect = 5e-15
Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 67/312 (21%)
Query: 191 VNTLKA-NVEEVIEELRNDGVEVVRSERVPTILKIKGP--YNFDSSKAFNKGKIIVQEEA 247
+ TLK N E++ ++++D EV V ++ I P NF + +I+Q++A
Sbjct: 489 LGTLKPENFAEMVTKMKDD--EVYVDPHVENLI-IFAPNIQNFYEYWMVEQRYLILQDKA 545
Query: 248 SAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRM 307
S + + +LNP+PG + D AAPG KT+H A +M+N+GK++A D R+ +K+ ++
Sbjct: 546 SCLPAFLLNPRPGSQVFDTCAAPGMKTSHAAAIMENQGKVWAMDRAADRVATMKQLLDAS 605
Query: 308 GIKIVKPIIKDGRKAPEILGEEIADR-------VLLDAPCTSSGTIGKNPELR------- 353
+ I D L ++ D+ ++D PC+ SG + + E+
Sbjct: 606 KVAIASSFCGD------FLKTDVTDKKFSKVKFAIVDPPCSGSGIVKRMDEITGGNAEKE 659
Query: 354 --------------------WRLRES----KIKEMAQLQRELLESAAKLVKPG-GLLLYT 388
W+ E+ K K++ + +L+ A KL PG +Y+
Sbjct: 660 RLEKLKNLQVHKNLDLLKMCWKCSENCFKKKTKKLIENDAMILKHALKL--PGLKRAVYS 717
Query: 389 TCSLFTEENEENVKWFLNN---HQEFKLVHLNSP---------YDPGFLEGTMRAWPHRH 436
TCS+ EENE+ V L + Q + L P Y+ G E +RA P
Sbjct: 718 TCSVHEEENEQVVDEVLLDTYVRQNYVLKKNVLPEWTYRGLKTYEVG--EHCLRANPKVT 775
Query: 437 STIGFFYALLRK 448
T GFF A+ +
Sbjct: 776 LTNGFFVAVFER 787
>emb|CAB70101.1| (AL132949) contains similarity to Pfam domain: PF01189
(NOL1/NOP2/sun family), Score=57.3, E-value=3e-16,
N=2~cDNA EST yk65h1.3 comes from this gene~cDNA EST
yk65h1.5 comes from this gene~cDNA EST yk274e1.3 comes
from this gene~cDNA EST yk478h4.3 comes>
Length = 469
Score = 83.5 bits (203), Expect = 5e-15
Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 67/312 (21%)
Query: 191 VNTLKA-NVEEVIEELRNDGVEVVRSERVPTILKIKGP--YNFDSSKAFNKGKIIVQEEA 247
+ TLK N E++ ++++D EV V ++ I P NF + +I+Q++A
Sbjct: 166 LGTLKPENFAEMVTKMKDD--EVYVDPHVENLI-IFAPNIQNFYEYWMVEQRYLILQDKA 222
Query: 248 SAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRM 307
S + + +LNP+PG + D AAPG KT+H A +M+N+GK++A D R+ +K+ ++
Sbjct: 223 SCLPAFLLNPRPGSQVFDTCAAPGMKTSHAAAIMENQGKVWAMDRAADRVATMKQLLDAS 282
Query: 308 GIKIVKPIIKDGRKAPEILGEEIADR-------VLLDAPCTSSGTIGKNPELR------- 353
+ I D L ++ D+ ++D PC+ SG + + E+
Sbjct: 283 KVAIASSFCGD------FLKTDVTDKKFSKVKFAIVDPPCSGSGIVKRMDEITGGNAEKE 336
Query: 354 --------------------WRLRES----KIKEMAQLQRELLESAAKLVKPG-GLLLYT 388
W+ E+ K K++ + +L+ A KL PG +Y+
Sbjct: 337 RLEKLKNLQVHKNLDLLKMCWKCSENCFKKKTKKLIENDAMILKHALKL--PGLKRAVYS 394
Query: 389 TCSLFTEENEENVKWFLNN---HQEFKLVHLNSP---------YDPGFLEGTMRAWPHRH 436
TCS+ EENE+ V L + Q + L P Y+ G E +RA P
Sbjct: 395 TCSVHEEENEQVVDEVLLDTYVRQNYVLKKNVLPEWTYRGLKTYEVG--EHCLRANPKVT 452
Query: 437 STIGFFYALLRK 448
T GFF A+ +
Sbjct: 453 LTNGFFVAVFER 464
>gi|6324306 Ynl022cp [Saccharomyces cerevisiae]
>gi|1730712|sp|P53972|YNC2_YEAST HYPOTHETICAL 56.2 KD
PROTEIN IN UME3-HDA1 INTERGENIC REGION
>gi|2131865|pir||S62934 hypothetical protein YNL022c -
yeast (Saccharomyces cerevisiae)
>gi|1301853|emb|CAA95884.1| (Z71298) ORF YNL022c
[Saccharomyces cerevisiae]
Length = 490
Score = 79.6 bits (193), Expect = 7e-14
Identities = 84/341 (24%), Positives = 130/341 (37%), Gaps = 86/341 (25%)
Query: 189 VRVNTLKAN----VEEVIEELRNDGV------------EVVRSERVPTILKIKGPYNFDS 232
+R+N LK + E V+ ELR + E +P + I +
Sbjct: 156 IRINPLKCHPNGETEPVLAELRKKFTLKVDKWSELVPGSIYYDEFIPNLFGIHPSDKITA 215
Query: 233 SKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELM------KNKGK 286
+ + GKII+Q+ AS + ILNP P ++++D +APG KTTH A + N +
Sbjct: 216 HELYKHGKIIIQDRASCFPAHILNPGPSDIVIDSCSAPGNKTTHTASYIYPEPPKDNNTR 275
Query: 287 IYAFDIDKTRMKRLKEFVNRMGIK-IVKPIIKDGRKAPEILGEEIADRVLLDAPCTSSGT 345
IYAF+ D R K L++ + G + + D K + ++D C+ SG
Sbjct: 276 IYAFEKDPERAKVLQKMIKIAGCSPNISVNVGDFTKLATPEKYKDVTCFIVDPSCSGSGI 335
Query: 346 IGK------------------------------NPELRWRLRESKIKEMAQLQRELLESA 375
G+ EL+ RL + + ++ + A
Sbjct: 336 FGRKFFDSFNRRKIDDKDDDGGIVPDEQEEFIAKEELQTRLAKLSSFQFQMVKHAMSFPA 395
Query: 376 AKLVKPGGLLLYTTCSLFTEENEENVKWFL-------------------------NNHQE 410
AK + +Y+TCS+ EENE V L +E
Sbjct: 396 AKKI------VYSTCSIHAEENERVVIDLLLDKSVREWGWKVAPKREVIPSWPRRGKVEE 449
Query: 411 FKLVHLNS-PYDPGFL-EGTMRAWPHRHSTIGFFYALLRKD 449
F+ V + YDP L EG +RA P IGFF +D
Sbjct: 450 FEEVFRDGVTYDPQQLAEGCIRALPKSDGGIGFFAVCFERD 490
>emb|CAA21831.1| (AL033125) 1-evidence=predicted by
content~1-method=genefinder;084~1-evidence_end~2-
evidence=predicted by
match~2-match_accession=SWISS-PROT:P38205~2-
match_description=HYPOTHETICAL 77.9 KD PROTEIN IN
RRN10-MCM2 INTERGENIC REGION.~2-match_species=SACCHA>
Length = 751
Score = 78.4 bits (190), Expect = 2e-13
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 20/178 (11%)
Query: 239 GKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNK--------GKIYAF 290
G I QE S + ++L+ +P + ++D+ AAPG KT L E + G + A
Sbjct: 156 GGISRQEAVSMIPPIVLDVRPTDKVLDMCAAPGSKTAQLIEALHAAPEEHKIPPGFVLAN 215
Query: 291 DIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEIL-----GEEIA---DRVLLDAPCTS 342
D+D R L R+ + D P ++ G + D++L D PC+
Sbjct: 216 DVDNNRCYMLVHQAKRLNSPCLLVTNHDSSVFPNLVTTKPDGSKAILKFDKILCDVPCSG 275
Query: 343 SGTIGKNPE--LRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENE 398
GT+ KNP+ L+W L ++ + +Q ++ A++++ GG L+Y+TCSL ENE
Sbjct: 276 DGTLRKNPDIWLKWNLAQAY--NLHGIQYRIVRRGAEMLEVGGRLVYSTCSLNPIENE 331
>gb|AAF45921.1| (AE003430) EG:EG0007.9 gene product [Drosophila melanogaster]
Length = 746
Score = 78.4 bits (190), Expect = 2e-13
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 20/178 (11%)
Query: 239 GKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNK--------GKIYAF 290
G I QE S + ++L+ +P + ++D+ AAPG KT L E + G + A
Sbjct: 156 GGISRQEAVSMIPPIVLDVRPTDKVLDMCAAPGSKTAQLIEALHAAPEEHKIPPGFVLAN 215
Query: 291 DIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEIL-----GEEIA---DRVLLDAPCTS 342
D+D R L R+ + D P ++ G + D++L D PC+
Sbjct: 216 DVDNNRCYMLVHQAKRLNSPCLLVTNHDSSVFPNLVTTKPDGSKAILKFDKILCDVPCSG 275
Query: 343 SGTIGKNPE--LRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENE 398
GT+ KNP+ L+W L ++ + +Q ++ A++++ GG L+Y+TCSL ENE
Sbjct: 276 DGTLRKNPDIWLKWNLAQAY--NLHGIQYRIVRRGAEMLEVGGRLVYSTCSLNPIENE 331
>pir||T38272 probable NOL1-NOP2-sun family nucleolar protein - fission yeast
(Schizosaccharomyces pombe) >gi|2465159|emb|CAB16888.1|
(Z99753) putative NOL1-NOP2-sun family nucleolar protein
[Schizosaccharomyces pombe]
Length = 674
Score = 76.5 bits (185), Expect = 6e-13
Identities = 57/193 (29%), Positives = 81/193 (41%), Gaps = 33/193 (17%)
Query: 239 GKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNK-------------- 284
G I QE S + L L+ +P VI+D+ AAPG KT L E + K
Sbjct: 139 GNINRQEAVSMLPPLFLDVEPHHVILDMCAAPGSKTAQLIEAVYKKANIKDAAHDSKNLK 198
Query: 285 ---GKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIA---------- 331
G + A D D R + L +NR+ + + D P I + +
Sbjct: 199 SVEGLVIANDADPKRAQMLVHQINRLNSPNILVVNHDASTMPNIYVKGSSPSDGLNVIEE 258
Query: 332 ------DRVLLDAPCTSSGTIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLL 385
DR+L D PC+ GT KN L + + LQ +L +L+K GG L
Sbjct: 259 KKILKFDRILADVPCSGDGTFRKNLSLWREWSANSAFSLHPLQLRILIRGLQLLKVGGCL 318
Query: 386 LYTTCSLFTEENE 398
+Y+TCS+ ENE
Sbjct: 319 VYSTCSINPIENE 331
>emb|CAC05734.1| (AL391744) putative methyltransferase possibily cytidine and tRNAs;
similar to yeast ncl1 [Schizosaccharomyces pombe]
Length = 396
Score = 72.6 bits (175), Expect = 9e-12
Identities = 59/189 (31%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 239 GKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKN------------KGK 286
G I QE S V L+LN + ++D+ AAPG KT L E + G
Sbjct: 123 GDINRQESVSMVPPLLLNVESHHKVLDMCAAPGSKTAQLLEALHKPTKKEDITTLLPSGI 182
Query: 287 IYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEIL-----GEEIA--DRVLLDAP 339
+ A D D R L + R+ V + D P G++ DR+L D P
Sbjct: 183 VIANDSDNKRAHMLVHQIKRLNSPNVLIVNHDASFLPNFHLSSPDGKKFLKFDRILADVP 242
Query: 340 CTSSGTIGKNPEL--RWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEEN 397
C+ GT KN L W L+ + Q+ ++L +L++ GG L+Y+TCSL EN
Sbjct: 243 CSGDGTFRKNIALWNEWSLKTALGLHATQI--KILMRGLQLLEKGGRLVYSTCSLNPIEN 300
Query: 398 EENVKWFLN 406
E V LN
Sbjct: 301 EAVVSAVLN 309
>gi|6319447 Probable proliferating-cell nucleolar antigen (human p120); Ncl1p
[Saccharomyces cerevisiae]
>gi|586408|sp|P38205|NCL1_YEAST PUTATIVE
METHYLTRANSFERASE NCL1 >gi|626852|pir||S45758
proliferating-cell nucleolar antigen homolog YBL024w -
yeast (Saccharomyces cerevisiae)
>gi|536023|emb|CAA84843.1| (Z35785) ORF YBL024w
[Saccharomyces cerevisiae] >gi|602895|emb|CAA54502.1|
(X77291) homolog of human proliferating-cell nucleolar
protein p120 [Saccharomyces cerevisiae]
Length = 684
Score = 70.2 bits (169), Expect = 4e-11
Identities = 67/266 (25%), Positives = 103/266 (38%), Gaps = 56/266 (21%)
Query: 239 GKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELM-----KNKGKIYAFDID 293
G I QE S + ++L +P ++D+ AAPG KT L E + + G + A D D
Sbjct: 145 GNISRQEAVSMIPPIVLEVKPHHTVLDMCAAPGSKTAQLIEALHKDTDEPSGFVVANDAD 204
Query: 294 KTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIA---------DRVLLDAPCTSSG 344
R L + R+ + + D + P I + DR+L D PC+ G
Sbjct: 205 ARRSHMLVHQLKRLNSANLMVVNHDAQFFPRIRLHGNSNNKNDVLKFDRILCDVPCSGDG 264
Query: 345 TIGKNPELRWRLRESKIKEMAQLQRELLESAAKLVKPGGLLLYTTCSLFTEENEENVKWF 404
T+ KN + + +Q +L L+K G L+Y+TCSL ENE V
Sbjct: 265 TMRKNVNVWKDWNTQAGLGLHAVQLNILNRGLHLLKNNGRLVYSTCSLNPIENEAVVAEA 324
Query: 405 LNN-HQEFKLVH----------------------------------LNSPYDPG------ 423
L + +LV+ L+S + P
Sbjct: 325 LRKWGDKIRLVNCDDKLPGLIRSKGVSKWPVYDRNLTEKTKGDEGTLDSFFSPSEEEASK 384
Query: 424 -FLEGTMRAWPHRHSTIGFFYALLRK 448
L+ MR +PH+ +T GFF + K
Sbjct: 385 FNLQNCMRVYPHQQNTGGFFITVFEK 410
>gb|AAD22359.1|AC006592_16 (AC006592) unknown protein [Arabidopsis thaliana]
Length = 837
Score = 70.2 bits (169), Expect = 4e-11
Identities = 55/186 (29%), Positives = 81/186 (42%), Gaps = 27/186 (14%)
Query: 239 GKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKN--------KGKIYAF 290
G I QE S V L L+ P ++D+ AAPG KT L E++ G + A
Sbjct: 165 GNITRQEAVSMVPPLFLDVHPDHFVLDMCAAPGSKTFQLLEIIHEASEPGSLPNGLVVAN 224
Query: 291 DIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEI-----------------LGEEIADR 333
D+D R L RM + +G++ P + + DR
Sbjct: 225 DVDFKRSNLLIHQTKRMCTSNLIVTNHEGQQFPGCRLNKSRASEKGISENMPINQLAFDR 284
Query: 334 VLLDAPCTSSGTIGKNPELRWRLRESKIKE-MAQLQRELLESAAKLVKPGGLLLYTTCSL 392
VL D PC+ GT+ K P++ WR S + + LQ L L+K GG ++Y+TCS+
Sbjct: 285 VLCDVPCSGDGTLRKAPDI-WRKWNSGMGNGLHSLQIILAMRGLSLLKVGGKMIYSTCSM 343
Query: 393 FTEENE 398
E+E
Sbjct: 344 NPVEDE 349
>dbj|BAB13875.1| (AK021688) unnamed protein product [Homo sapiens]
Length = 315
Score = 70.2 bits (169), Expect = 4e-11
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 17/244 (6%)
Query: 218 VPTILKIKGPYNFDSSKAFNKGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHL 277
+P +L + + G +I+Q+ AS + +++L+P+ + KT+HL
Sbjct: 1 MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRRAPMSWMPVPPQAIKTSHL 60
Query: 278 AELMKNKGKIYAFDIDKTRMKRLKEFVNRMGIKIVKPIIKDGRKAPEILGEEIAD--RVL 335
A L+KN+GKI+AFD+D R+ + + G+ + + ++ A L + VL
Sbjct: 61 AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCE-LAEEDFLAVSPLDPRYREVHYVL 119
Query: 336 LDAPCTSSGTIGKNPELRWRLRESKIK--EMAQLQRELLESAAKLVKPG-GLLLYTTCSL 392
LD C+ SG + E S ++ +A Q+ L A L P L+Y+ CSL
Sbjct: 120 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHA--LTFPSLQRLVYSMCSL 177
Query: 393 FTEENEENVKWFL-NNHQEFKLV-------HLNSPYDPGFLEGTMRAWPHRHSTIGFFYA 444
EENE+ V+ L N F+L H PG E +RA P + GFF A
Sbjct: 178 CQEENEDMVQDALQQNPDAFRLAPALPARPHRGLSTFPG-AEHCLRASPKTTLSGGFFVA 236
Query: 445 LLRK 448
++ +
Sbjct: 237 VIER 240
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.138 0.406
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171109181
Number of Sequences: 2977
Number of extensions: 7219245
Number of successful extensions: 23269
Number of sequences better than 1.0e-10: 80
Number of HSP's better than 0.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 23020
Number of HSP's gapped (non-prelim): 102
length of query: 449
length of database: 189,106,746
effective HSP length: 56
effective length of query: 393
effective length of database: 155,591,474
effective search space: 61147449282
effective search space used: 61147449282
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 166 (69.1 bits)