BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0855 (iorA-1) DE:indolepyruvate ferredoxin oxidoreductase,
subunit alpha (iorA-1)
(648 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75038 indolepyruvate ferredoxin oxidoreductase, chain alph... 1324 0.0
sp|O58495|IORA_PYRHO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA ... 1271 0.0
sp|O07835|IORA_PYRKO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA ... 1107 0.0
gi|11499084 indolepyruvate ferredoxin oxidoreductase, subunit al... 543 e-153
pir||G75085 indolepyruvate ferredoxin oxidoreductase, chain alph... 535 e-151
pir||D71055 probable indolepyruvate ferredoxin oxidoreductase al... 529 e-149
sp|O27880|IORA_METTH INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA ... 505 e-142
gb|AAK42250.1| Indolepyruvate ferredoxin oxidoreductase alpha su... 481 e-134
emb|CAC12141.1| (AL445066) indolepyruvate ferredoxin oxidoreduct... 423 e-117
pir||F75168 2-ketoglutarate ferredoxin oxidoreductase, chain alp... 92 2e-17
pir||F71046 probable ferredoxin oxidoreductase alpha subunit - P... 91 3e-17
pir||H69004 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.... 83 7e-15
sp|Q57724|KORA_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KET... 83 7e-15
sp|O27112|KORA_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KET... 83 9e-15
gi|11498080 2-ketoglutarate ferredoxin oxidoreductase, subunit a... 82 3e-14
pir||A53708 indolepyruvate synthase (EC 1.2.7.-) alpha subunit -... 79 2e-13
pir||A69194 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) al... 77 5e-13
sp|O26800|VORB_METTH KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORB... 77 5e-13
pir||C75168 2-ketoglutarate ferredoxin oxidoreductase, chain alp... 71 5e-11
pir||H72214 hypothetical protein TM1759 - Thermotoga maritima (s... 70 7e-11
>pir||E75038 indolepyruvate ferredoxin oxidoreductase, chain alpha (iora-1)
PAB0855 - Pyrococcus abyssi (strain Orsay)
>gi|5458715|emb|CAB50202.1| (AJ248287) indolepyruvate
ferredoxin oxidoreductase, subunit alpha (iorA-1)
[Pyrococcus abyssi]
Length = 648
Score = 1324 bits (3390), Expect = 0.0
Identities = 648/648 (100%), Positives = 648/648 (100%)
Query: 1 MVKVTDIVLWDKPGERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAG 60
MVKVTDIVLWDKPGERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAG
Sbjct: 1 MVKVTDIVLWDKPGERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAG 60
Query: 61 VYMEYSTNEKVAFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVAD 120
VYMEYSTNEKVAFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVAD
Sbjct: 61 VYMEYSTNEKVAFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVAD 120
Query: 121 DPSMWSSQNEQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSS 180
DPSMWSSQNEQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSS
Sbjct: 121 DPSMWSSQNEQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSS 180
Query: 181 HMRGDVVLGELPQEIKEGKRKFGDFKKNPERYVDIPAFQRPKHKWLLETIEKFREEFNNS 240
HMRGDVVLGELPQEIKEGKRKFGDFKKNPERYVDIPAFQRPKHKWLLETIEKFREEFNNS
Sbjct: 181 HMRGDVVLGELPQEIKEGKRKFGDFKKNPERYVDIPAFQRPKHKWLLETIEKFREEFNNS 240
Query: 241 PFNWIEGPEDAKVGIIAPGLSYAYVKEALAWLGVDNVKVLKLGTPFPVPYGLLEKFFQGL 300
PFNWIEGPEDAKVGIIAPGLSYAYVKEALAWLGVDNVKVLKLGTPFPVPYGLLEKFFQGL
Sbjct: 241 PFNWIEGPEDAKVGIIAPGLSYAYVKEALAWLGVDNVKVLKLGTPFPVPYGLLEKFFQGL 300
Query: 301 ERVLIVEELEPVVEEQVKVWAFDKGINVEIHGKDLVPRVYEMTTRRAVEAIAKFLGLETP 360
ERVLIVEELEPVVEEQVKVWAFDKGINVEIHGKDLVPRVYEMTTRRAVEAIAKFLGLETP
Sbjct: 301 ERVLIVEELEPVVEEQVKVWAFDKGINVEIHGKDLVPRVYEMTTRRAVEAIAKFLGLETP 360
Query: 361 INFEEIDEKYKKVQEIVPPRPPSLCPACPHRNTFFALRKAATPRAIYPSDIGCYTLGVLP 420
INFEEIDEKYKKVQEIVPPRPPSLCPACPHRNTFFALRKAATPRAIYPSDIGCYTLGVLP
Sbjct: 361 INFEEIDEKYKKVQEIVPPRPPSLCPACPHRNTFFALRKAATPRAIYPSDIGCYTLGVLP 420
Query: 421 PLKTVDTTIAMGGSIGVAHGLSIALNGSIAEEQRKTGKGKKIIAATIGDSTFFHTGLPAL 480
PLKTVDTTIAMGGSIGVAHGLSIALNGSIAEEQRKTGKGKKIIAATIGDSTFFHTGLPAL
Sbjct: 421 PLKTVDTTIAMGGSIGVAHGLSIALNGSIAEEQRKTGKGKKIIAATIGDSTFFHTGLPAL 480
Query: 481 ANAIYNRSNVLIVVLDNLVTAMTGDQPNPGTGETPHGPGKRILIEEVAKAMGADFVAVVD 540
ANAIYNRSNVLIVVLDNLVTAMTGDQPNPGTGETPHGPGKRILIEEVAKAMGADFVAVVD
Sbjct: 481 ANAIYNRSNVLIVVLDNLVTAMTGDQPNPGTGETPHGPGKRILIEEVAKAMGADFVAVVD 540
Query: 541 PYDIKETYETFKKALEVEGVSVVVARRACALYRIGQLRRAGKQWPIYQVNEDKCTGCKIC 600
PYDIKETYETFKKALEVEGVSVVVARRACALYRIGQLRRAGKQWPIYQVNEDKCTGCKIC
Sbjct: 541 PYDIKETYETFKKALEVEGVSVVVARRACALYRIGQLRRAGKQWPIYQVNEDKCTGCKIC 600
Query: 601 INAYGCPAIYWDPEKKKAKVDPLMCWGCGGCAQVCPFDAFEKVREGEL 648
INAYGCPAIYWDPEKKKAKVDPLMCWGCGGCAQVCPFDAFEKVREGEL
Sbjct: 601 INAYGCPAIYWDPEKKKAKVDPLMCWGCGGCAQVCPFDAFEKVREGEL 648
>sp|O58495|IORA_PYRHO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA (IOR) (INDOLEPYRUVATE
FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|7450338|pir||F71124 probable indolepyruvate
ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3257173|dbj|BAA29856.1| (AP000003) 648aa
long hypothetical indolepyruvate ferredoxin
oxidoreductase alpha subunit [Pyrococcus horikoshii]
Length = 648
Score = 1271 bits (3254), Expect = 0.0
Identities = 611/648 (94%), Positives = 634/648 (97%)
Query: 1 MVKVTDIVLWDKPGERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAG 60
MVKVTDIVLWDKPGE+VLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMA VA +AG
Sbjct: 1 MVKVTDIVLWDKPGEKVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAMVAKKAG 60
Query: 61 VYMEYSTNEKVAFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVAD 120
VYMEYSTNEKVAFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMG+NGGL+VVVAD
Sbjct: 61 VYMEYSTNEKVAFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGINGGLIVVVAD 120
Query: 121 DPSMWSSQNEQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSS 180
DPSMWSSQNEQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSS
Sbjct: 121 DPSMWSSQNEQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSS 180
Query: 181 HMRGDVVLGELPQEIKEGKRKFGDFKKNPERYVDIPAFQRPKHKWLLETIEKFREEFNNS 240
HMRGDVVLGELPQEIKEGKRKFG+FKKNPE+YVDIPAFQRPKH WLLETIEKFREEFN S
Sbjct: 181 HMRGDVVLGELPQEIKEGKRKFGNFKKNPEKYVDIPAFQRPKHPWLLETIEKFREEFNTS 240
Query: 241 PFNWIEGPEDAKVGIIAPGLSYAYVKEALAWLGVDNVKVLKLGTPFPVPYGLLEKFFQGL 300
PFNWIEGPEDAKVGIIAPGLSYAYVKEALAWLG+DNVK+LKLGTPFPVPYGLLEKFF GL
Sbjct: 241 PFNWIEGPEDAKVGIIAPGLSYAYVKEALAWLGIDNVKILKLGTPFPVPYGLLEKFFNGL 300
Query: 301 ERVLIVEELEPVVEEQVKVWAFDKGINVEIHGKDLVPRVYEMTTRRAVEAIAKFLGLETP 360
ERVLIVEELEPVVEEQVKVWAFD IN+EIHGKDLVPRVYEMTTRRAVEA+AKFLG+ETP
Sbjct: 301 ERVLIVEELEPVVEEQVKVWAFDNNINIEIHGKDLVPRVYEMTTRRAVEAVAKFLGVETP 360
Query: 361 INFEEIDEKYKKVQEIVPPRPPSLCPACPHRNTFFALRKAATPRAIYPSDIGCYTLGVLP 420
INF+EIDEKYKKVQE+VPPRPPSLCPACPHRNTFFA+RKAATPRAI+PSDIGCYTLGVLP
Sbjct: 361 INFQEIDEKYKKVQEMVPPRPPSLCPACPHRNTFFAIRKAATPRAIFPSDIGCYTLGVLP 420
Query: 421 PLKTVDTTIAMGGSIGVAHGLSIALNGSIAEEQRKTGKGKKIIAATIGDSTFFHTGLPAL 480
PLKTVDTTIAMGGSIGVAHGLSIALNG++ EEQRKTGK KKII ATIGDSTFFHTGLPAL
Sbjct: 421 PLKTVDTTIAMGGSIGVAHGLSIALNGALGEEQRKTGKEKKIIVATIGDSTFFHTGLPAL 480
Query: 481 ANAIYNRSNVLIVVLDNLVTAMTGDQPNPGTGETPHGPGKRILIEEVAKAMGADFVAVVD 540
ANAIYNRSNVLIVV+DN+VTAMTGDQPNPGTGETPHGPGKRILIEEVA+AMGADFVAVVD
Sbjct: 481 ANAIYNRSNVLIVVMDNMVTAMTGDQPNPGTGETPHGPGKRILIEEVARAMGADFVAVVD 540
Query: 541 PYDIKETYETFKKALEVEGVSVVVARRACALYRIGQLRRAGKQWPIYQVNEDKCTGCKIC 600
PYDIKETYET KKALEVEGVSVVV+RRACALYRIGQLRR GKQWPIYQVNE+KCTGCKIC
Sbjct: 541 PYDIKETYETIKKALEVEGVSVVVSRRACALYRIGQLRREGKQWPIYQVNEEKCTGCKIC 600
Query: 601 INAYGCPAIYWDPEKKKAKVDPLMCWGCGGCAQVCPFDAFEKVREGEL 648
INAYGCPAIYWD EKKKA+VDPLMCWGCGGCAQVCPF AFEKVREGEL
Sbjct: 601 INAYGCPAIYWDAEKKKARVDPLMCWGCGGCAQVCPFGAFEKVREGEL 648
>sp|O07835|IORA_PYRKO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA (IOR) (INDOLEPYRUVATE
FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|2209070|dbj|BAA20528.1| (D86221) indolepyruvate
ferredoxin oxidoreductase alpha subunit [Pyrococcus sp.]
Length = 647
Score = 1107 bits (2832), Expect = 0.0
Identities = 530/647 (81%), Positives = 578/647 (88%)
Query: 1 MVKVTDIVLWDKPGERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAG 60
M KVTDIVLWDKPGERVLLLGN AI RGALE NI V+AAYPGTPSSE+T VA +AG
Sbjct: 1 MAKVTDIVLWDKPGERVLLLGNHAIERGALEANIAVFAAYPGTPSSELTIRWQTVAKKAG 60
Query: 61 VYMEYSTNEKVAFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVAD 120
VYMEYSTNEKVAFETAL+A+W+GLRAMTAMKHVGLNVA DSF++ MGV GG V++VAD
Sbjct: 61 VYMEYSTNEKVAFETALAAAWSGLRAMTAMKHVGLNVAADSFLSSVGMGVEGGFVIMVAD 120
Query: 121 DPSMWSSQNEQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSS 180
DPSMWSSQNEQDTR AKFAN+PVLEPSS EAK+M KYAFE+SEK+ VILRTTTRSS
Sbjct: 121 DPSMWSSQNEQDTRVYAKFANVPVLEPSSPHEAKEMTKYAFELSEKFKHFVILRTTTRSS 180
Query: 181 HMRGDVVLGELPQEIKEGKRKFGDFKKNPERYVDIPAFQRPKHKWLLETIEKFREEFNNS 240
H RGDVVLGELP+EIK GKRKFG FKK+P R+VD+PA R H +LE IEK REE NN
Sbjct: 181 HARGDVVLGELPEEIKTGKRKFGKFKKDPTRFVDVPAHARKFHPLILEKIEKIREELNNC 240
Query: 241 PFNWIEGPEDAKVGIIAPGLSYAYVKEALAWLGVDNVKVLKLGTPFPVPYGLLEKFFQGL 300
PFNWIEG EDAKVGIIAPGLSYAYVKEALAWLGV++VK+LKLGTPFPVPYGLL KFF GL
Sbjct: 241 PFNWIEGKEDAKVGIIAPGLSYAYVKEALAWLGVEDVKILKLGTPFPVPYGLLGKFFDGL 300
Query: 301 ERVLIVEELEPVVEEQVKVWAFDKGINVEIHGKDLVPRVYEMTTRRAVEAIAKFLGLETP 360
E+VLIVEELE VVEEQVK WA+DKG+ + IHGKDLVPRVYEMTTRRAVEAIAKFLGLETP
Sbjct: 301 EKVLIVEELERVVEEQVKTWAYDKGLRIPIHGKDLVPRVYEMTTRRAVEAIAKFLGLETP 360
Query: 361 INFEEIDEKYKKVQEIVPPRPPSLCPACPHRNTFFALRKAATPRAIYPSDIGCYTLGVLP 420
INF EIDEKY+KV +IVPPRPPSLCPACPHRN+FFA+RKAA P+AIYPSDIGCYTLGVLP
Sbjct: 361 INFAEIDEKYEKVSQIVPPRPPSLCPACPHRNSFFAIRKAAGPKAIYPSDIGCYTLGVLP 420
Query: 421 PLKTVDTTIAMGGSIGVAHGLSIALNGSIAEEQRKTGKGKKIIAATIGDSTFFHTGLPAL 480
PL+TVDTT+AMG SIG+ HGLSIA+NGS+AEE+ K GK K+II ATIGDSTF+HTGLPAL
Sbjct: 421 PLRTVDTTVAMGASIGIGHGLSIAMNGSLAEEEHKEGKEKQIIVATIGDSTFYHTGLPAL 480
Query: 481 ANAIYNRSNVLIVVLDNLVTAMTGDQPNPGTGETPHGPGKRILIEEVAKAMGADFVAVVD 540
ANAIYNRSNVLIVVLDNLVTAMTGDQPNPGTG+TPHG GKRI IE+VAKAMGADFVAVVD
Sbjct: 481 ANAIYNRSNVLIVVLDNLVTAMTGDQPNPGTGQTPHGMGKRIPIEDVAKAMGADFVAVVD 540
Query: 541 PYDIKETYETFKKALEVEGVSVVVARRACALYRIGQLRRAGKQWPIYQVNEDKCTGCKIC 600
PYDIK TYET KKALEVEGVSVVV+R+ CALY+IGQ+RR G +WPIY V EDKCTGCKIC
Sbjct: 541 PYDIKATYETIKKALEVEGVSVVVSRQVCALYKIGQMRRRGMKWPIYHVVEDKCTGCKIC 600
Query: 601 INAYGCPAIYWDPEKKKAKVDPLMCWGCGGCAQVCPFDAFEKVREGE 647
I YGCPAIYWDPE KKAKVDP MCWGCGGCAQVCPFDAFE ++EGE
Sbjct: 601 IKTYGCPAIYWDPETKKAKVDPTMCWGCGGCAQVCPFDAFEPMKEGE 647
>gi|11499084 indolepyruvate ferredoxin oxidoreductase, subunit alpha (iorA)
[Archaeoglobus fulgidus]
>gi|6685558|sp|O28783|IORA_ARCFU INDOLEPYRUVATE
OXIDOREDUCTASE SUBUNIT IORA (IOR) (INDOLEPYRUVATE
FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|7450334|pir||H69435 indolepyruvate ferredoxin
oxidoreductase, subunit alpha (iorA) homolog -
Archaeoglobus fulgidus >gi|2649079|gb|AAB89760.1|
(AE001000) indolepyruvate ferredoxin oxidoreductase,
subunit alpha (iorA) [Archaeoglobus fulgidus]
Length = 623
Score = 543 bits (1384), Expect = e-153
Identities = 301/646 (46%), Positives = 406/646 (62%), Gaps = 38/646 (5%)
Query: 8 VLWDKPGERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMA----AVASRAGVYM 63
V+ D GE+V LLGN+AI RGA+E I V+AAYPGTPSSEI DT++ + + YM
Sbjct: 5 VVRDAEGEKVFLLGNEAIARGAIEAGIDVFAAYPGTPSSEIADTLSDACRLLRGKMDFYM 64
Query: 64 EYSTNEKVAFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVADDPS 123
EYS NEKVAFE A+ AS AG RAM MKHVG+NVA D + +Y+G GG V+V ADDPS
Sbjct: 65 EYSANEKVAFEVAVGASLAGKRAMATMKHVGVNVAADPLFSFAYVGARGGFVLVTADDPS 124
Query: 124 MWSSQNEQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMR 183
M SSQNEQD R K A +PV+EPSSVQEAKD K F++SEK+G +ILR+ TR SH
Sbjct: 125 MHSSQNEQDNRWYGKAAKLPVVEPSSVQEAKDYAKLCFDLSEKFGLPMILRSYTRLSHAS 184
Query: 184 GDVVLGELPQEIKEGKRKFGDFKKNPERYVDIPAFQRPKHKWLLETIEKFREEFNNSPFN 243
G V LG++P+ KE R +++++PE V +PA R LLE +EK FN+S N
Sbjct: 185 GVVELGKIPE--KEFSRV--EWERHPETDVVLPAHARKLKPILLEKLEKIERYFNSSEMN 240
Query: 244 WIEGPEDAKVGIIAPGLSYAYVKEALAWLGVDNVKVLKLGTPFPVPYGLLEKFFQGLERV 303
W++ D VGIIA GLSYAY KEAL L + N+ VLKL + P+P L+E F +++V
Sbjct: 241 WVD-EGDGDVGIIACGLSYAYTKEALENLNL-NLPVLKLSSMHPLPERLIENFVSQMKKV 298
Query: 304 LIVEELEPVVEEQVKVWAFDKGINVEIHGK--DLVPRVYEMTTRRAVEAIAKFLGLETPI 361
++VEE++P VE V+ E++GK +P YE R IAK LG++
Sbjct: 299 IVVEEVDPFVELHVRAMGL-----AEVYGKMNGYMPMNYEYNVGRVETGIAKALGIKPSR 353
Query: 362 NFEEIDEKYKKVQEIVPPRPPSLCPACPHRNTFFALRKAATP--RAIYPSDIGCYTLGVL 419
++E I + +K+ PPRPP LCP CPH +F+A+R+ A PSDIGCYTLG+
Sbjct: 354 DYEGIVAESQKLAAKAPPRPPVLCPGCPHSASFYAIRRVVDELGDAALPSDIGCYTLGIN 413
Query: 420 PPLKTVDTTIAMGGSIGVAHGLSIALNGSIAEEQRKTGKGKKIIAATIGDSTFFHTGLPA 479
PL+ VD TI MG S+GV++GL+ LN I ATIGDSTF H G+P
Sbjct: 414 KPLEGVDITICMGASVGVSNGLAHVLNNK--------------IIATIGDSTFIHAGIPP 459
Query: 480 LANAIYNRSNVLIVVLDNLVTAMTGDQPNPGTGETPHG-PGKRILIEEVAKAMGADFVAV 538
L NA+YN ++ ++V+LDN T MTG QP+PGTG G GK + IE++ + G +FV V
Sbjct: 460 LINAVYNHADFVLVILDNSTTGMTGHQPHPGTGFRGCGEAGKAVRIEDIVRGCGVEFVEV 519
Query: 539 VDPYDIKETYETFKKALEVEGVSVVVARRACALYRIGQLRRAGKQWPIYQVNEDKCTGCK 598
V+PY++++ + ++AL +GV+VV+AR+ CA+ RR GK Y+V ED CT C
Sbjct: 520 VNPYNVRKMVDVLRRALNHDGVAVVIARQPCAILWSRARRREGK-IVTYKVTED-CTLCM 577
Query: 599 ICINAYGCPAIYWDPEKKKAKVDPLMCWGCGGCAQVCPFDAFEKVR 644
C+N + CPA+ +D E K +D +C GC CA++CP A + +
Sbjct: 578 ECVNTFACPALIFDGE--KVSIDQSLCVGCAVCAKICPNRAIKPAK 621
>pir||G75085 indolepyruvate ferredoxin oxidoreductase, chain alpha (iora-2)
PAB0718 - Pyrococcus abyssi (strain Orsay)
>gi|5458500|emb|CAB49988.1| (AJ248286) indolepyruvate
ferredoxin oxidoreductase, subunit alpha (iorA-2)
[Pyrococcus abyssi]
Length = 613
Score = 535 bits (1363), Expect = e-151
Identities = 300/640 (46%), Positives = 404/640 (62%), Gaps = 45/640 (7%)
Query: 18 LLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAFETAL 77
LL+GN+AI GALE I YPGTPS+E+ +T+A + + V+ E++ NEKVA E A
Sbjct: 4 LLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARL--KPEVFAEWAPNEKVALEEAA 61
Query: 78 SASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVADDPSMWSSQNEQDTRAIA 137
S+AGLR++ MK VGLNVA D M+++Y GV GGLV++VADDP +SQ EQD R
Sbjct: 62 GVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRYYG 121
Query: 138 KFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRGDVVLGELPQEIKE 197
K A +PVLEP QEA D++KYA+E+SEKY VI RTTTR +H DV +G E E
Sbjct: 122 KIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVG----EFVE 177
Query: 198 GKRKFGDFKKNPERYVDIP-AFQRPKHKWLLETIEKFREEFNNSPFNWIEGPEDAKVGII 256
RK FKK+ ERYV R +HKWL ETI K EEFN+ PFNW+EG + K+GII
Sbjct: 178 LNRK-PVFKKDIERYVRASMEGNRRRHKWLNETIRKIEEEFNSMPFNWVEG--EGKLGII 234
Query: 257 APGLSYAYVKEALAWLGVDNVKVLKLGTPFPVPYGLLEKFFQGLERVLIVEELEPVVEEQ 316
G Y YVKE L +G D K+LKL TP P+P L+ F + +E+V+++EE P +EE+
Sbjct: 235 VEGAPYNYVKEILPSIGED-FKILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLEEE 293
Query: 317 VKVWAFDKGINVEIHGK--DLVPRVYEMTTRRAVEAIAKFLGLETPINFEEIDEKYKKVQ 374
+KV A+++G++V I+GK L+P E+T R AI KFLG E I ++ + +
Sbjct: 294 IKVVAYEEGLSVPIYGKRTGLLPLEGELTPRLVKNAILKFLGKEA--EEVSIPQEVLEAE 351
Query: 375 EIVPPRPPSLCPACPHRNTF----FALRKAATPRAIYP--SDIGCYTLGVLPPLKTVDTT 428
++ P RPP +CP CPHR ++ ALR+ R P DIGCY L +LPPL+ + T
Sbjct: 352 KLAPKRPPGMCPGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAIWTE 411
Query: 429 IAMGGSIGVAHGLSIALNGSIAEEQRKTGKGKKIIAATIGDSTFFHTGLPALANAIYNRS 488
MG SI +A+G S+ +N K I ATIGDSTFFH G+ L +A+Y
Sbjct: 412 FVMGASISLANGQSVVMN--------------KKIVATIGDSTFFHNGIQPLIDAVYKDL 457
Query: 489 NVLIVVLDNLVTAMTGDQPNPGTGETPHG-PGKRILIEEVAKAMGADFVAVVDPYDIKET 547
+VL+++LDN TAMTG QP+PGTG + G + I IE + +A+G +V VDPYD+K T
Sbjct: 458 DVLVIILDNRTTAMTGHQPHPGTGGSETGRKFREIDIEALVRAIGVKYVKTVDPYDLKAT 517
Query: 548 YETFKKALEVEGVSVVVARRACAL--YRIGQLRRAGKQWPIYQVNEDKCTGCKICINAYG 605
E K+A++V+G +V++A+R C + R G+ R PI + E+KCTGCK CI G
Sbjct: 518 KEAIKEAMQVKGPAVIIAKRECVIPVIRRGETREP----PI--IIEEKCTGCKACILLSG 571
Query: 606 CPAIYWDPEKKKAKVDPLMCWGCGGCAQVCPFDAFEKVRE 645
C A+ +DPE +K K+D L+C GCG C Q+CPFDA K RE
Sbjct: 572 CQALIYDPETRKVKIDELICTGCGICNQLCPFDAI-KFRE 610
>pir||D71055 probable indolepyruvate ferredoxin oxidoreductase alpha subunit -
Pyrococcus horikoshii >gi|3257555|dbj|BAA30238.1|
(AP000005) 618aa long hypothetical indolepyruvate
ferredoxin oxidoreductase alpha subunit [Pyrococcus
horikoshii]
Length = 618
Score = 529 bits (1347), Expect = e-149
Identities = 295/642 (45%), Positives = 403/642 (61%), Gaps = 49/642 (7%)
Query: 18 LLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAFETAL 77
LL+GN+AI GALE + YPGTPS+E+ +T+A + + V+ E++ NEKVA E A
Sbjct: 9 LLMGNEAIAYGALEAGVSFATGYPGTPSTEVIETIARL--KPEVFAEWAPNEKVALEEAA 66
Query: 78 SASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVADDPSMWSSQNEQDTRAIA 137
AS+AG+R++ MK VGLNVA D M+++Y GV GGLVV+VADDP +SQ EQD R
Sbjct: 67 GASYAGIRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVVLVADDPGPHTSQTEQDDRYYG 126
Query: 138 KFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRGDVVLGELPQEIKE 197
K + +PVLEP QEA D++KYA+E+SEKY +I RTTTR +H DV +GE +
Sbjct: 127 KISLLPVLEPYDPQEAHDLIKYAYELSEKYKVPIIFRTTTRVNHTTADVEVGEF-----K 181
Query: 198 GKRKFGDFKKNPERYVDIP-AFQRPKHKWLLETIEKFREEFNNSPFNWIEGPEDAKVGII 256
+ FKK+ ERYV R +HKWL ET++K EEFNN +NWIEG D K+GII
Sbjct: 182 DLNRIPKFKKDIERYVRASMEGNRKRHKWLNETLKKIEEEFNNLDYNWIEG--DGKIGII 239
Query: 257 APGLSYAYVKEALAWLGVDNVKVLKLGTPFPVPYGLLEKFFQGLERVLIVEELEPVVEEQ 316
G Y YVKE L + D K+LKL TP P+P ++ F + +E+ L++EE P +EE+
Sbjct: 240 VEGAPYNYVKEVLPSIEGD-FKILKLSTPHPLPRKIVINFLKSVEKALVIEEGAPFLEEE 298
Query: 317 VKVWAFDKGINVEIHGK--DLVPRVYEMTTRRAVEAIAKFLGLETPINFEEID--EKYKK 372
+KV A+++G+ V I+GK +P E+T R AI K LG E EE+ ++ ++
Sbjct: 299 IKVVAYEEGLRVPIYGKRTGYLPLEGELTPRLVKNAILKLLGKEG----EEVSLPKEVEE 354
Query: 373 VQEIVPPRPPSLCPACPHRNTF----FALRKAATPRAIYP--SDIGCYTLGVLPPLKTVD 426
+ + P RPP +CP CPHR ++ ALR+ + P DIGCY L +LPPL+ +
Sbjct: 355 AERLAPKRPPVMCPGCPHRGSYRALLDALRELGYGKFDIPIHGDIGCYALSLLPPLEAIW 414
Query: 427 TTIAMGGSIGVAHGLSIALNGSIAEEQRKTGKGKKIIAATIGDSTFFHTGLPALANAIYN 486
T MG SI +A+G S+ + GKKI+ ATIGDSTFFH G+ L +A+Y
Sbjct: 415 TEFVMGASISLANGQSVVM-------------GKKIV-ATIGDSTFFHNGIQPLIDAVYK 460
Query: 487 RSNVLIVVLDNLVTAMTGDQPNPGTGETPHG-PGKRILIEEVAKAMGADFVAVVDPYDIK 545
+VL+++LDN TAMTG QP+PGTG + G + I IE + K +G +V VDPYD+K
Sbjct: 461 DLDVLVIILDNRTTAMTGHQPHPGTGGSETGRKFREIDIEALVKGIGVKYVKTVDPYDLK 520
Query: 546 ETYETFKKALEVEGVSVVVARRACAL--YRIGQLRRAGKQWPIYQVNEDKCTGCKICINA 603
T E K+A++V+G +V++ARR C + R G+ R PI V EDKCTGCK CI
Sbjct: 521 ATKEAIKEAMKVKGPAVIIARRECVIPVIRRGETREP----PI--VIEDKCTGCKACILL 574
Query: 604 YGCPAIYWDPEKKKAKVDPLMCWGCGGCAQVCPFDAFEKVRE 645
GCPA+ +DPE +K ++D L+C GCG C Q+CPFDA K RE
Sbjct: 575 SGCPALIYDPETRKVRIDELICTGCGICNQLCPFDAI-KFRE 615
>sp|O27880|IORA_METTH INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA (IOR) (INDOLEPYRUVATE
FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|7450335|pir||G69114 indolepyruvate oxidoreductase,
alpha subunit - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622988|gb|AAB86318.1| (AE000938)
indolepyruvate oxidoreductase, alpha subunit
[Methanobacterium thermoautotrophicum]
Length = 618
Score = 505 bits (1287), Expect = e-142
Identities = 281/649 (43%), Positives = 402/649 (61%), Gaps = 46/649 (7%)
Query: 8 VLWDKPGERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYST 67
+L + G+++ LLGN+A VR A+E +GV + YPGTPSSEI + ++ +A RAG+Y E+S
Sbjct: 6 ILNAREGDKLFLLGNEATVRAAIESGVGVASTYPGTPSSEIGNVLSGIAKRAGMYFEFSV 65
Query: 68 NEKVAFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVADDPSMWSS 127
NEKVA E A +A+ +G+R+ T MKHVGLNVA DSFM+ +Y GV G+VV+ ADDPSM+SS
Sbjct: 66 NEKVALEVAAAAAASGVRSFTFMKHVGLNVASDSFMSTAYTGVRAGMVVLTADDPSMFSS 125
Query: 128 QNEQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRGDVV 187
QNEQD R A+ A +P+LEPS QE + + +AFE+SE YG V+LRTTTR SHMRG V
Sbjct: 126 QNEQDNRHYARLACLPLLEPSDPQEVLEFMNHAFELSEDYGLPVLLRTTTRVSHMRGVVE 185
Query: 188 LGELPQEIKEGKRKFGDFKKNPERYVDIPAFQRPKHKWLLETIEKFREEFNNSPFNWI-E 246
+G +E E G F+K+PER+V +PA R H+ L++ +++ R + S N +
Sbjct: 186 VGSRMREPSE-----GFFRKDPERFVPVPATARVMHRKLVDKMKELRIRADESELNRVFN 240
Query: 247 GPEDAKVGIIAPGLSYAYVKEALAWLGVDNVKVLKLGTPFPVPYGLLEKFFQGLERVLIV 306
G D+++G++A G ++ YV +AL LG++ + VLKLG +P P GL+E+F GL+RVL+V
Sbjct: 241 GGSDSELGVVASGGAFNYVYDALESLGLE-LPVLKLGFTYPFPAGLVEEFLSGLKRVLVV 299
Query: 307 EELEPVVEEQVKVWAFDKGINVEIHGK--DLVPRVYEMTTRRAVEAIAKFLGLETPINFE 364
EE++P++E +V A +++++HGK +P +YE +AI+ G +
Sbjct: 300 EEVDPIMEREVLAVAGSARLDLDVHGKLDGTLPEIYEYNEDILRKAISGLTGAPSVEREC 359
Query: 365 EIDEKYKKVQEIVPPRPPSLCPACPHRNTFFALRKAAT------PRAIYPSDIGCYTLGV 418
++ + +P RPPSLCP CPHR ++A+R+AA I+P+DIGCYTLG+
Sbjct: 360 DVPD--------IPERPPSLCPGCPHRAVYYAVRRAADELELSGDEIIFPTDIGCYTLGI 411
Query: 419 LPPLKTVDTTIAMGGSIGVAHGLSIALNGSIAEEQRKTGKGKKIIAATIGDSTFFHTGLP 478
PP D ++MG SIG + G S A QR I + IGDSTFFH G+P
Sbjct: 412 EPPYSAADYLLSMGSSIGTSCGFSAATT------QR--------IVSFIGDSTFFHAGIP 457
Query: 479 ALANAIYNRSNVLIVVLDNLVTAMTGDQPNPGTGETPHG-PGKRILIEEVAKAMGADFVA 537
L NA++N+ ++VVLDN TAMTG QP+PG G I IEE+ +A G +FV
Sbjct: 458 PLINAVHNKQRFVLVVLDNRTTAMTGGQPHPGLPVDGMGDEAPEISIEEIVRASGVEFVE 517
Query: 538 VVDPYDIKETYETFKKALEVEGVSVVVARRACALYRIGQLRRAGKQWPIYQVNEDKCTGC 597
V+P +IK T ET K+ALE E V+VV+++ C L G +R G+ V+ +KC C
Sbjct: 518 TVNPMNIKRTSETVKRALEHESVAVVISKYPCML-SSGAVR--GRP---MAVDGEKCDLC 571
Query: 598 KICINAYGCPAIYWDPEKKKAKVDPLMCWGCGGCAQVCPFDAFEKVREG 646
CI CPA+ + + +DPL C GC C Q+CP A + +G
Sbjct: 572 LECIRDLACPAMV--TREGEVFIDPLKCRGCSVCLQICPAGAIKPEGKG 618
>gb|AAK42250.1| Indolepyruvate ferredoxin oxidoreductase alpha subunit (iorA)
[Sulfolobus solfataricus]
Length = 612
Score = 481 bits (1225), Expect = e-134
Identities = 286/638 (44%), Positives = 375/638 (57%), Gaps = 68/638 (10%)
Query: 18 LLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAFETAL 77
L+LGN+AI GAL + V A YPGTPS+EI +T+ +Y E+STNEKVAFETA
Sbjct: 10 LILGNEAIAFGALSAGVSVAAGYPGTPSTEIIETLMKFGK---IYAEWSTNEKVAFETAY 66
Query: 78 SASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVADDPSMWSSQNEQDTRAIA 137
A+ G A+T MKHVGLNVA D ++ SY GV G LV+V ADDPSMWSSQNEQD R
Sbjct: 67 GAAINGAFALTTMKHVGLNVAADPLISSSYTGVEGALVIVSADDPSMWSSQNEQDNRYYG 126
Query: 138 KFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRGDVVLGELPQEIKE 197
A IPV+EP Q A D+ AF++S K VI R+TTR H+RG P E+K
Sbjct: 127 LHALIPVVEPYDPQSAHDLTIEAFKLSNKVKHPVIFRSTTRIGHIRG-------PVELKP 179
Query: 198 GKRK-FGDFKKNPERYVDIPAFQRPKHKWLLETIEKFREEFNNSPFNWIEG-----PEDA 251
R G KNP+RYV +P R L+ E+ EE +EG D+
Sbjct: 180 PSRPVMGKVIKNPKRYVLVPENARRDRVEQLKRWERIEEE--------VEGLNELIDNDS 231
Query: 252 KVGIIAPGLSYAYVKEALAWLGVDNVKVLKLGTPFPVPYGLLEKFFQGLERVLIVEELEP 311
+ IIA G+S+ YV +A+ L + +L+L TP P+P L+ K +RVLIVEE EP
Sbjct: 232 ENLIIASGISFGYVIDAIKELEI-KANILRLTTPVPIPKRLILKAVSNSKRVLIVEEGEP 290
Query: 312 VVEEQVKVWAFDKGINVEIHGKDLVPRVYEMTTRRAVEAIAKFLGLETPINFEEIDEKYK 371
+VE QVK +D+G+ VE+HGKDLV RV EMT + A +KF GL +I Y
Sbjct: 291 IVEYQVKDLLYDQGVRVELHGKDLVSRVGEMTLDKVYYAFSKFFGL-------DIVTDYL 343
Query: 372 KVQEIVPPRPPSLCPACPHRNTFFALRKAATPRAIYPS------DIGCYTLGVLPPLKTV 425
+V + +PPRPP+LCP CPHR++F L+KA T + P+ DIGCYTLG+LPP
Sbjct: 344 EVPQDIPPRPPALCPGCPHRSSFIDLKKAITMASFKPNETFISGDIGCYTLGLLPPFDAQ 403
Query: 426 DTTIAMGGSIGVAHGLSIALNGSIAEEQRKTGKGKKIIAATIGDSTFFHTGLPALANAIY 485
D++ MG SIG+A+G+ R TG I A IGDSTFFH+G+ ALANA+Y
Sbjct: 404 DSSTDMGSSIGIANGV-----------YRATG---NIPIAVIGDSTFFHSGISALANAVY 449
Query: 486 NRSNVLIVVLDNLVTAMTGDQPNPGTGETPHGPGKRILIEEVAKAMGADFVAVVDPYDIK 545
N++ +L++VLDN TAMTG QP+ P K I I EVAK +G +V VDP+D+
Sbjct: 450 NQTPMLVLVLDNRSTAMTGQQPS---------PSKEIDIGEVAKGLGVKYVRYVDPFDVN 500
Query: 546 ETYETFKKAL----EVEGVSVVVARRACALYRIGQLRRAGKQWPIYQVNEDKCTGCKICI 601
+ AL + + +VV+A+RACAL + + + P V+ +KCTGC IC
Sbjct: 501 SSIRELSNALKWVKDNKQPAVVIAKRACALLVMDNVEES--NLPKAIVDLEKCTGCSICY 558
Query: 602 NAYGCPAIYWDPEKKKAKVDPLMCWGCGGCAQVCPFDA 639
+ + CPAI KKA++D C GCG C +CPF A
Sbjct: 559 DYFTCPAII-PRNDKKAEIDNYTCIGCGACVPICPFKA 595
>emb|CAC12141.1| (AL445066) indolepyruvate ferredoxin oxidoreductase, alpha subunit
related protein [Thermoplasma acidophilum]
Length = 605
Score = 423 bits (1076), Expect = e-117
Identities = 251/632 (39%), Positives = 354/632 (55%), Gaps = 62/632 (9%)
Query: 19 LLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAFETALS 78
++GN+AI A+ + V A YPGTPS+EI + + VY+E+S NEK+AFETA
Sbjct: 8 MIGNEAIAAAAVHAGVSVAAGYPGTPSTEIIENVRKFGP--DVYVEWSVNEKIAFETAYG 65
Query: 79 ASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVADDPSMWSSQNEQDTRAIAK 138
A+ +G + A+KHVGLNVA D + SY G+ G LV+V ADD SMWSSQNEQD R
Sbjct: 66 AAMSGGTGLVAVKHVGLNVASDPMFSSSYTGITGSLVIVSADDSSMWSSQNEQDNRFYGL 125
Query: 139 FANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRGDVVLGELPQEIKEG 198
A IPVLEP VQ A D+ AFE+S + VILRTTTR H+R +V+ + + ++
Sbjct: 126 HALIPVLEPYDVQSAYDLTLKAFEVSRLFHHPVILRTTTRIGHVRSNVIYEDHHEPLR-- 183
Query: 199 KRKFGDFKKNPERYVDIPAFQRPKHKWLLETIEKFREEFNNSPFNWIEGPEDAKVGIIAP 258
G K+P YV P R K + +E++RE + P+ II
Sbjct: 184 ----GKVIKDPNTYVLAPENARSDRK---KQLERWREISDYLSSLCSYEPDGGDSIIITG 236
Query: 259 GLSYAYVKEALAWLGVDNVKVLKLGTPFPVPYGLLEKFFQGLERVLIVEELEPVVEEQVK 318
G+SY+Y+KEAL G+ + VL+L P+P + G+ RVL+VEE +PV+E QV
Sbjct: 237 GISYSYLKEALEDAGI-HTNVLRLDATVPIPESAILNHINGIRRVLVVEENDPVMEMQVA 295
Query: 319 VWAFDKGINVEIHGKDLVPRVYEMTTRRAVEAIAKFLGLETPINFEEIDEKYKKVQEIVP 378
G VE HGKDL+P EMT + + F G++ ++ + E +
Sbjct: 296 DILLRNGKAVEFHGKDLIPIEGEMTFEKLKAGLFAFFGMKYSGSYFQ--------DEPLT 347
Query: 379 PRPPSLCPACPHRNTFFALRK----AATPRAIYPSDIGCYTLGVLPPLKTVDTTIAMGGS 434
PRPP+LCP CPHR++FF ++K + + + DIGCYTLG LPP + D+ MG S
Sbjct: 348 PRPPALCPGCPHRSSFFDIKKGLSRVSMQNSFFSGDIGCYTLGALPPFREQDSATNMGSS 407
Query: 435 IGVAHGLSIALNGSIAEEQRKTGKGKKIIAATIGDSTFFHTGLPALANAIYNRSNVLIVV 494
+G+++G+ R T ++ A IGDSTFFH+G+ +ANA+YN + +IVV
Sbjct: 408 LGISNGVF-----------RST---DQVPVAVIGDSTFFHSGIEGVANAVYNNTAEIIVV 453
Query: 495 LDNLVTAMTGDQPNPGTGETPHGPGKRILIEEVAKAMGADFVAVVDPYD-------IKET 547
LDN TAMTG QP+P T I I V +AMG ++V DP+D +++
Sbjct: 454 LDNRSTAMTGQQPSPSTA---------IDIGNVCRAMGIEYVETFDPFDVDAGEKAVQQA 504
Query: 548 YETFKKALEVEGVSVVVARRACALYRIGQLRRAGKQWPIYQVNEDKCTGCKICINAYGCP 607
E KK L+ +V++A+RACAL L + + P V+ ++CTGC IC + + CP
Sbjct: 505 AEYVKKTLK---PAVIIAKRACAL---EVLEKVDSETPKAYVDSNRCTGCTICYDFFTCP 558
Query: 608 AIYWDPEKKKAKVDPLMCWGCGGCAQVCPFDA 639
+I KKA +D C GCG C +VCPF+A
Sbjct: 559 SIL-PLSNKKATIDD-SCIGCGACVEVCPFNA 588
>pir||F75168 2-ketoglutarate ferredoxin oxidoreductase, chain alpha (kora-2)
PAB0346 - Pyrococcus abyssi (strain Orsay)
>gi|5457939|emb|CAB49429.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit alpha (korA-2)
[Pyrococcus abyssi]
Length = 385
Score = 92.1 bits (225), Expect = 2e-17
Identities = 91/336 (27%), Positives = 143/336 (42%), Gaps = 45/336 (13%)
Query: 14 GERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAF 73
G+ + G++AI R A+ YA YP TP+SEI + MA + +E +
Sbjct: 8 GKADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASI 67
Query: 74 ETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVV--------ADDPSMW 125
+ ASWAG +AMTA G ++ ++ + Y + +VVV P++
Sbjct: 68 AAIIGASWAGAKAMTATSGPGFSLMQEN---IGYAVMTETPIVVVDVQRGGPSTGQPTLP 124
Query: 126 SSQN-EQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRG 184
S + Q ++ VL PS+VQEA D AF ++EKY VIL + HMR
Sbjct: 125 SQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRE 184
Query: 185 DVVLGE----------LPQEIKEGKRKFGD-----------FKKNPERYVD--------- 214
V + E LPQ +E K FGD F + YV
Sbjct: 185 RVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGR 244
Query: 215 IPAFQRPKHKWLLETIEKFREEFNNSPFNW-IEGPEDAKVGIIAPGLSYAYVKEALAWLG 273
+R H+ ++ I + E F++ +DA+V I+ G+ A+ L
Sbjct: 245 PRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELR 304
Query: 274 VDNVK--VLKLGTPFPVPYGLLEKFFQGLERVLIVE 307
+K +LK+ T +P + L+EK +ER+ + E
Sbjct: 305 ELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPE 340
>pir||F71046 probable ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3258091|dbj|BAA30774.1| (AP000006) 385aa
long hypothetical ferredoxin oxidoreductase alpha
subunit [Pyrococcus horikoshii]
Length = 385
Score = 91.3 bits (223), Expect = 3e-17
Identities = 91/336 (27%), Positives = 144/336 (42%), Gaps = 45/336 (13%)
Query: 14 GERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAF 73
G+ + G++AI R A+ YA YP TP+SEI + MA + +E +
Sbjct: 8 GKADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLIDGVVIQMEDEIGSI 67
Query: 74 ETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVV--------ADDPSMW 125
+ ASWAG++AMTA G ++ ++ + Y + +VVV P++
Sbjct: 68 AAVIGASWAGVKAMTATSGPGFSLMQEN---IGYAVMTETPIVVVNVQRGGPSTGQPTLP 124
Query: 126 SSQN-EQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRG 184
S + Q + VL PS+VQEA D AF ++EKY VIL + HMR
Sbjct: 125 SQGDIMQSIWGTHGDHTLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRE 184
Query: 185 DVVLGE----------LPQEIKEGKRKFGD-----------FKKNPERYVD--------- 214
V + E LP +E K FGD F K YV
Sbjct: 185 RVYIPEPDEIEIVNRKLPGSEEEAKLPFGDPHGDGVPPMPIFGKGYRTYVTGLTHDEKGR 244
Query: 215 IPAFQRPKHKWLLETIEKFREEFNNSPFNW-IEGPEDAKVGIIAPGLSYAYVKEALAWLG 273
+R H+ L+ I + E+ F++ +DA++ I+ G+ A+ L
Sbjct: 245 PRTVEREVHERLIRRIFEKIEKNKKDIFDYEARELDDAEIAIVTTGIVARSALRAIKELR 304
Query: 274 VDNVK--VLKLGTPFPVPYGLLEKFFQGLERVLIVE 307
+K +LK+ T +P + L+EK + +ER+ + E
Sbjct: 305 NLGIKAGLLKINTIWPFDFELIEKVAEKVERIYVPE 340
>pir||H69004 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain
- Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622136|gb|AAB85529.1| (AE000875) 2-oxoglutarate
oxidoreductase, alpha subunit [Methanobacterium
thermoautotrophicum]
Length = 378
Score = 83.5 bits (203), Expect = 7e-15
Identities = 86/338 (25%), Positives = 134/338 (39%), Gaps = 48/338 (14%)
Query: 12 KPGERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKV 71
K E + GN A RGA++ +A YP TPS+EI + MA + R G +E
Sbjct: 2 KMTEEYFIQGNDACARGAIKAGCRFFAGYPITPSTEIAEEMALLLPREGGVFVQMEDEIG 61
Query: 72 AFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVV--------ADDPS 123
A + A W+G+R MTA G ++ + V Y + +V+V P+
Sbjct: 62 ALGAVIGAVWSGVRGMTATSGPGFSLMQEH---VGYAAMTETPLVIVNVQRGSPSTGQPT 118
Query: 124 MWSSQNEQDTR-AIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHM 182
M S + R I L PSSVQE D AF ++E+Y V++ HM
Sbjct: 119 MASQSDMMQARWGSHGDYEIIALSPSSVQECFDFTVRAFNLAEEYRVPVMVMGDEIVGHM 178
Query: 183 RGDVVLGELPQEIKEGKRK--------FGDFKKNPERYVDIPAF---------------- 218
R + +P +K KR+ F F + ++PAF
Sbjct: 179 REKIT---IPDRVKIRKRRGPSVPPEEFLPFSAPEDGVPEMPAFGDGYRIPVTGLTHDEG 235
Query: 219 -----QRPK--HKWLLETIEKFREEFNNSPFNWIEGPEDAKVGIIAPGLSYAYVKEALAW 271
P+ H+ + +K + E EDA + +I+ G V A+
Sbjct: 236 GYPDASNPEGHHRLVKRLCDKILRHRDRISDVQEELTEDAYITVISYGAPSRSVATAVKM 295
Query: 272 LGVDNVKV--LKLGTPFPVPYGLLEKFFQGLERVLIVE 307
D V+ LK+ TP+P P + + ++L+VE
Sbjct: 296 AREDGVRAGYLKINTPWPFPETEVRAAAERSGKLLVVE 333
>sp|Q57724|KORA_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KETOGLUTARATE
OXIDOREDUCTASE ALPHA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|2127893|pir||E64334 2-oxoacid--ferredoxin
oxidoreductase (EC 1.2.7.-) alpha chain - Methanococcus
jannaschii >gi|1592279|gb|AAB98264.1| (U67483)
2-ketoglutarate ferredoxin oxidoreductase, subunit alpha
(korA) [Methanococcus jannaschii]
Length = 366
Score = 83.5 bits (203), Expect = 7e-15
Identities = 100/370 (27%), Positives = 151/370 (40%), Gaps = 67/370 (18%)
Query: 21 GNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAFETALSAS 80
GNQA +GA++ +A YP TPS+EI + MA + G Y +E + + AS
Sbjct: 8 GNQACAKGAIKAGCRFFAGYPITPSTEIAEAMARELPKVGGYYIQMEDEIGSIAAVIGAS 67
Query: 81 WAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVV------ADDPSM---------- 124
W GL+AMTA G ++ M + +YM +VV + P+M
Sbjct: 68 WGGLKAMTATSGPGFSL-MQENIGFAYMTETPCVVVDIQRGGPSTGQPTMASQGDMMQCR 126
Query: 125 WSSQNEQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRG 184
W S + + A+A PSSVQE D AF +EKY V + HMR
Sbjct: 127 WGSHGDYEVIALA---------PSSVQEMYDFTIMAFNYAEKYRIPVFVMADEIVGHMRE 177
Query: 185 DVVLGE--------LPQEIKEGKRKFGDFKKNPERYV-----------------DIPAFQ 219
V+L + P+E K K+ + K PE V P
Sbjct: 178 KVILHDNIEIINRKKPEE-KPCKKPYPFDKLIPEMPVFGEGYNVHITGLTHDERGYPDVS 236
Query: 220 RPKHKWLLETIEKFREEFNNSPFNWIEGPEDAKVGIIAPGLSYAYVKEALAWL---GVDN 276
H L+ I + + W DA++ + G VK A+ L G+D
Sbjct: 237 PETHDKLVRRIVNKIRKNKDEIIKWEGENLDAEIVFVCYGSPSRTVKHAVRNLREKGLD- 295
Query: 277 VKVLKLGTPFPVPYGLLEKFFQGLERVLIVE--------ELEPVVEEQVKVWAFDKGINV 328
V ++L T +P P LL+K ++V++ E E+E V ++ +V DK I
Sbjct: 296 VGYIRLITVYPFPDDLLKKL--KAKKVVVPEMNLGQIYYEVERVCKKAEEVILVDK-IGG 352
Query: 329 EIHGKDLVPR 338
E+H + + R
Sbjct: 353 ELHRPEELER 362
>sp|O27112|KORA_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KETOGLUTARATE
OXIDOREDUCTASE ALPHA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
Length = 376
Score = 83.1 bits (202), Expect = 9e-15
Identities = 85/335 (25%), Positives = 133/335 (39%), Gaps = 48/335 (14%)
Query: 15 ERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAFE 74
E + GN A RGA++ +A YP TPS+EI + MA + R G +E A
Sbjct: 3 EEYFIQGNDACARGAIKAGCRFFAGYPITPSTEIAEEMALLLPREGGVFVQMEDEIGALG 62
Query: 75 TALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVV--------ADDPSMWS 126
+ A W+G+R MTA G ++ + V Y + +V+V P+M S
Sbjct: 63 AVIGAVWSGVRGMTATSGPGFSLMQEH---VGYAAMTETPLVIVNVQRGSPSTGQPTMAS 119
Query: 127 SQNEQDTR-AIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRGD 185
+ R I L PSSVQE D AF ++E+Y V++ HMR
Sbjct: 120 QSDMMQARWGSHGDYEIIALSPSSVQECFDFTVRAFNLAEEYRVPVMVMGDEIVGHMREK 179
Query: 186 VVLGELPQEIKEGKRK--------FGDFKKNPERYVDIPAF------------------- 218
+ +P +K KR+ F F + ++PAF
Sbjct: 180 IT---IPDRVKIRKRRGPSVPPEEFLPFSAPEDGVPEMPAFGDGYRIPVTGLTHDEGGYP 236
Query: 219 --QRPK--HKWLLETIEKFREEFNNSPFNWIEGPEDAKVGIIAPGLSYAYVKEALAWLGV 274
P+ H+ + +K + E EDA + +I+ G V A+
Sbjct: 237 DASNPEGHHRLVKRLCDKILRHRDRISDVQEELTEDAYITVISYGAPSRSVATAVKMARE 296
Query: 275 DNVKV--LKLGTPFPVPYGLLEKFFQGLERVLIVE 307
D V+ LK+ TP+P P + + ++L+VE
Sbjct: 297 DGVRAGYLKINTPWPFPETEVRAAAERSGKLLVVE 331
>gi|11498080 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha (korA)
[Archaeoglobus fulgidus]
>gi|6685587|sp|O29781|KORA_ARCFU 2-OXOGLUTARATE SYNTHASE
SUBUNIT KORA (2-KETOGLUTARATE OXIDOREDUCTASE ALPHA
CHAIN) (KOR) (2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE
ALPHA SUBUNIT) >gi|7433685|pir||E69308
2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.-)
alpha chain korA - Archaeoglobus fulgidus
>gi|2650159|gb|AAB90768.1| (AE001072) 2-ketoglutarate
ferredoxin oxidoreductase, subunit alpha (korA)
[Archaeoglobus fulgidus]
Length = 346
Score = 81.5 bits (198), Expect = 3e-14
Identities = 84/311 (27%), Positives = 133/311 (42%), Gaps = 25/311 (8%)
Query: 15 ERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAFE 74
E L+ GN+A VRGA+ +A YP TPSSEI MA + + G +E +
Sbjct: 2 EMELIQGNEAAVRGAINAGCNFFAGYPITPSSEIAHGMAELLPKFGGVFIQMEDEIASIS 61
Query: 75 TALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVV---VVADDPSMW----SS 127
+ AS AG AMTA G ++ + + Y + VV V+ PS S
Sbjct: 62 AVIGASMAGAVAMTATSGPGFSLMQEG---MGYAAITESPVVIFNVMRAGPSTGIPTAPS 118
Query: 128 QNEQDTRAIAKFANIP--VLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRGD 185
Q + + P VL P+SV++ + AF+I+ ++ VI+ + HMR
Sbjct: 119 QGDAMQARYGSHGDYPIVVLAPASVKDMYYLTVEAFKIAFRFSTPVIVLSDEIVGHMRES 178
Query: 186 VV---LGELPQEIKEGKRKFGDFKKNPERYV----DIPAFQRPKHKWLLETIEKFREEFN 238
V LGE+ K K +++ V +P +++ LL + ++F
Sbjct: 179 VALPPLGEIESYEKRAKNLIDGRRRHRTGLVHTENGLPTTDLEEYEKLLRLLFAKFDDFR 238
Query: 239 NSPFNWIEGPEDAKVGIIAPGLSYAYVKEALAWLGVDNVK--VLKLGTPFPVPYGLLEKF 296
P EG E V +A G SY K + L V +LKL + FP P + ++
Sbjct: 239 --PMVRFEGEEG--VLFVAYGSSYRLAKSSAKLLAEKGVSAGILKLESLFPFPEDAVRRY 294
Query: 297 FQGLERVLIVE 307
+ + V++ E
Sbjct: 295 SKKADLVVVPE 305
>pir||A53708 indolepyruvate synthase (EC 1.2.7.-) alpha subunit - Pyrococcus
furiosus (fragment) >gi|547118|gb|AAB31014.1|
indolepyruvate ferredoxin oxidoreductase alpha subunit,
IOR alpha {N-terminal} [Pyrococcus furiosus, DSM 3638,
Peptide Partial, 40 aa]
Length = 40
Score = 78.8 bits (191), Expect = 2e-13
Identities = 37/40 (92%), Positives = 38/40 (94%)
Query: 2 VKVTDIVLWDKPGERVLLLGNQAIVRGALEGNIGVYAAYP 41
VKVTDIVLWDKPGERVLLLGNQAIVRGALEGNI V+A YP
Sbjct: 1 VKVTDIVLWDKPGERVLLLGNQAIVRGALEGNIAVFAXYP 40
>pir||A69194 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621790|gb|AAB85209.1| (AE000849) 2-oxoisovalerate
oxidoreductase, beta subunit [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 77.3 bits (187), Expect = 5e-13
Identities = 85/337 (25%), Positives = 141/337 (41%), Gaps = 60/337 (17%)
Query: 18 LLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAFETAL 77
++ GN A++ GA+ Y YP TP+SEI + G + +E+ A
Sbjct: 1 MVKGNTAVIIGAMYAGCDCYFGYPITPASEILHEASRYFPMVGRKFVQAESEEAAINMVY 60
Query: 78 SASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVADDPSMWSSQNEQ-DTRAI 136
A+ AG R MTA G+++ + ++ + +V V+ P + + EQ D I
Sbjct: 61 GAAAAGHRVMTASSGPGISLKQEGISFLAGAELPAVIVDVMRAGPGLGNIGPEQGDYNQI 120
Query: 137 AK------FANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRGDVVLGE 190
K + N+ VL PSSVQE D+ AFE+++KY V++ T D VLG+
Sbjct: 121 VKGGGHGNYRNM-VLAPSSVQEMCDLTMEAFELADKYRNPVVVLT---------DAVLGQ 170
Query: 191 LPQEIKEGKRKFGDFKKNPERYVDIPAFQRPKHKWLL----ETIEKF----------REE 236
+ + P R+ + RP W + ET++ EE
Sbjct: 171 MAE---------------PLRFPEEAVEHRPDTSWAVCGNRETMKNLVTSIFLDFDELEE 215
Query: 237 FN---NSPFNWIEGPE---------DAKVGIIAPGLSYAYVKEALAWLGVD--NVKVLKL 282
FN + IE E DA++ ++A G+S + A+ + NV +L+
Sbjct: 216 FNFYLQEKYARIEENEVRYEEYLVDDAEIVMVAYGISSRVARSAVETARAEGINVGLLRP 275
Query: 283 GTPFPVPYGLLEKFFQGLERVLIVEELEPVVEEQVKV 319
T FP P + + G R + VE + E +++
Sbjct: 276 ITLFPFPSDRIRELADGGCRFISVEMSSGQMREDIRM 312
>sp|O26800|VORB_METTH KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORB (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE BETA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE BETA SUBUNIT)
Length = 352
Score = 77.3 bits (187), Expect = 5e-13
Identities = 85/337 (25%), Positives = 141/337 (41%), Gaps = 60/337 (17%)
Query: 18 LLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAFETAL 77
++ GN A++ GA+ Y YP TP+SEI + G + +E+ A
Sbjct: 5 MVKGNTAVIIGAMYAGCDCYFGYPITPASEILHEASRYFPMVGRKFVQAESEEAAINMVY 64
Query: 78 SASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVADDPSMWSSQNEQ-DTRAI 136
A+ AG R MTA G+++ + ++ + +V V+ P + + EQ D I
Sbjct: 65 GAAAAGHRVMTASSGPGISLKQEGISFLAGAELPAVIVDVMRAGPGLGNIGPEQGDYNQI 124
Query: 137 AK------FANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRGDVVLGE 190
K + N+ VL PSSVQE D+ AFE+++KY V++ T D VLG+
Sbjct: 125 VKGGGHGNYRNM-VLAPSSVQEMCDLTMEAFELADKYRNPVVVLT---------DAVLGQ 174
Query: 191 LPQEIKEGKRKFGDFKKNPERYVDIPAFQRPKHKWLL----ETIEKF----------REE 236
+ + P R+ + RP W + ET++ EE
Sbjct: 175 MAE---------------PLRFPEEAVEHRPDTSWAVCGNRETMKNLVTSIFLDFDELEE 219
Query: 237 FN---NSPFNWIEGPE---------DAKVGIIAPGLSYAYVKEALAWLGVD--NVKVLKL 282
FN + IE E DA++ ++A G+S + A+ + NV +L+
Sbjct: 220 FNFYLQEKYARIEENEVRYEEYLVDDAEIVMVAYGISSRVARSAVETARAEGINVGLLRP 279
Query: 283 GTPFPVPYGLLEKFFQGLERVLIVEELEPVVEEQVKV 319
T FP P + + G R + VE + E +++
Sbjct: 280 ITLFPFPSDRIRELADGGCRFISVEMSSGQMREDIRM 316
>pir||C75168 2-ketoglutarate ferredoxin oxidoreductase, chain alpha (kora-1)
PAB2359 - Pyrococcus abyssi (strain Orsay)
>gi|5457936|emb|CAB49426.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit alpha (korA-1)
[Pyrococcus abyssi]
Length = 408
Score = 70.6 bits (170), Expect = 5e-11
Identities = 58/209 (27%), Positives = 92/209 (43%), Gaps = 17/209 (8%)
Query: 12 KPGERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKV 71
KPG ++G++A+ GA+ YA YP TPSSEI +TMA + G Y +E
Sbjct: 31 KPGN-YFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIA 89
Query: 72 AFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVADDPSM-WSSQNE 130
+ + ASW GL+ MTA G ++ ++ LV V PS +++
Sbjct: 90 SIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGA 149
Query: 131 QDTRAIAKFAN-----IPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRG- 184
Q A++ I + P SV++A AF ++E+ V++ H R
Sbjct: 150 QGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQ 209
Query: 185 ---------DVVLGELPQEIKEGKRKFGD 204
++V +LPQ +E + FGD
Sbjct: 210 IRIPDPDEVEIVYRKLPQNEEEARLPFGD 238
>pir||H72214 hypothetical protein TM1759 - Thermotoga maritima (strain MSB8)
>gi|4982338|gb|AAD36824.1|AE001814_6 (AE001814)
2-oxoisovalerate oxidoreductase, beta subunit, putative
[Thermotoga maritima]
Length = 356
Score = 70.2 bits (169), Expect = 7e-11
Identities = 81/343 (23%), Positives = 144/343 (41%), Gaps = 37/343 (10%)
Query: 15 ERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAFE 74
+++++ GN+AI A+ +Y AYP TP SEI + MA G + +E
Sbjct: 5 KKLMMKGNEAIAESAIRAGCRLYFAYPITPQSEIAEYMARRLPEVGGVFLQTESEIATVN 64
Query: 75 TALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVADDPSMWSSQNEQDTR 134
A+ G R MT+ G ++ + ++ + V VV P + + Q Q
Sbjct: 65 MVYGAACTGKRVMTSTSSPGFSLMQEGISYIAGAELPCVFVDVVRGGPGLGNIQPSQGDY 124
Query: 135 AIAKFA------NIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRGDVVL 188
A + VL PS++QEA D+ + AF+++++Y V++ M V L
Sbjct: 125 FQAVKGGGHGDYRLIVLAPSTLQEAVDLTQLAFDLADRYRNPVLILADGMIGQMMEPVEL 184
Query: 189 GE------LPQEIKEGKRKFGDFKKNPERYVDIPAF-----------QRPKHKW-LLETI 230
E LP R G + P R I AF +R + K+ L+E
Sbjct: 185 PEMRDLSTLPDHSDWALR--GARNREPHR---IAAFNIDPVGLEKMNKRLQEKYRLIEAS 239
Query: 231 EKFREEFNNSPFNWIEGPEDAKVGIIAPGLSYAYVKEALAWLGVDNVKVLKLGTPFPVPY 290
E+ EE+ ++G E VG G V ++L G+ + + T +P P
Sbjct: 240 EQRWEEYR------VDGAEYLMVGYGTMGRILKSVVDSLREEGIP-AGLFRPVTLWPFPK 292
Query: 291 GLLEKFFQGLERVLIVEELEPVVEEQVKVWAFDKGINVEIHGK 333
L++ + ++ + +VE + E V++ + + + V +G+
Sbjct: 293 RRLKELAKKVQLIFVVEMSSGQMVEDVQI-SVEGKVPVHFYGR 334
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.137 0.411
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 254177454
Number of Sequences: 2977
Number of extensions: 11265554
Number of successful extensions: 32284
Number of sequences better than 1.0e-10: 20
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 32193
Number of HSP's gapped (non-prelim): 24
length of query: 648
length of database: 189,106,746
effective HSP length: 56
effective length of query: 592
effective length of database: 155,591,474
effective search space: 92110152608
effective search space used: 92110152608
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 168 (69.9 bits)