BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0869 (PAB0869) DE:similar to glucanase
(335 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75040 probable aminopeptidase (EC 3.4.11.-) PAB0869 - Pyro... 679 0.0
pir||B71121 hypothetical protein PH0737 - Pyrococcus horikoshii ... 620 e-177
pir||C69830 glucanase homolog yhfE - Bacillus subtilis >gi|22262... 310 2e-83
pir||A75456 conserved hypothetical protein - Deinococcus radiodu... 219 3e-56
pir||D83214 conserved hypothetical protein PA3461 [imported] - P... 213 2e-54
pir||S72475 glucanase (EC 3.2.1.-) - Anabaena variabilis >gi|152... 86 6e-16
pir||A69984 endo-1,4-beta-glucanase homolog ysdC - Bacillus subt... 86 6e-16
pir||A72609 probable deblocking aminopeptidase APE1335 - Aeropyr... 81 2e-14
dbj|BAB06851.1| (AP001517) endo-1,4-beta-glucanase [Bacillus hal... 81 2e-14
pir||E75067 aminopeptidase m42 PAB2375 [imported] - Pyrococcus a... 80 5e-14
pir||B71165 hypothetical protein PH0519 - Pyrococcus horikoshii ... 78 1e-13
pir||E71029 probable Frv operon protein FrvX - Pyrococcus horiko... 76 4e-13
pir||D75105 aminopeptidase m42 PAB0437 [imported] - Pyrococcus a... 74 3e-12
pir||JC5634 deblocking aminopeptidase (EC 3.4.11.-) [validated] ... 73 4e-12
pir||D82912 Endo-1,4-beta-glucanase UU280 [imported] - Ureaplasm... 73 6e-12
pir||D75152 aminopeptidase m42 PAB2096 [imported] - Pyrococcus a... 72 1e-11
pir||E71193 probable operon protein Frv - Pyrococcus horikoshii ... 71 2e-11
dbj|BAB06976.1| (AP001518) endo-1,4-beta-glucanase [Bacillus hal... 71 2e-11
pir||C72301 endoglucanase - Thermotoga maritima (strain MSB8) >g... 70 4e-11
sp|Q57975|Y555_METJA HYPOTHETICAL PROTEIN MJ0555 >gi|2127881|pir... 69 9e-11
>pir||G75040 probable aminopeptidase (EC 3.4.11.-) PAB0869 - Pyrococcus abyssi
(strain Orsay) >gi|5458733|emb|CAB50220.1| (AJ248287)
similar to glucanase [Pyrococcus abyssi]
Length = 335
Score = 679 bits (1734), Expect = 0.0
Identities = 335/335 (100%), Positives = 335/335 (100%)
Query: 1 MERVVKILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVAGNHREPKLVVI 60
MERVVKILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVAGNHREPKLVVI
Sbjct: 1 MERVVKILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVAGNHREPKLVVI 60
Query: 61 AHVDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHV 120
AHVDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHV
Sbjct: 61 AHVDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHV 120
Query: 121 NKDAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYINGFIKSHFLDDK 180
NKDAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYINGFIKSHFLDDK
Sbjct: 121 NKDAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYINGFIKSHFLDDK 180
Query: 181 ASVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGGSAGYPPSARELLVVDMGVVGEGVS 240
ASVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGGSAGYPPSARELLVVDMGVVGEGVS
Sbjct: 181 ASVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGGSAGYPPSARELLVVDMGVVGEGVS 240
Query: 241 GKETAVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYGSDGSAALRAGWDFRV 300
GKETAVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYGSDGSAALRAGWDFRV
Sbjct: 241 GKETAVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYGSDGSAALRAGWDFRV 300
Query: 301 ALIGPGVHASHGMERTHVKGLLATKELLRAYIEEL 335
ALIGPGVHASHGMERTHVKGLLATKELLRAYIEEL
Sbjct: 301 ALIGPGVHASHGMERTHVKGLLATKELLRAYIEEL 335
>pir||B71121 hypothetical protein PH0737 - Pyrococcus horikoshii
>gi|3257145|dbj|BAA29828.1| (AP000003) 336aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 336
Score = 620 bits (1581), Expect = e-177
Identities = 297/333 (89%), Positives = 318/333 (95%)
Query: 1 MERVVKILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVAGNHREPKLVVI 60
MER+VKIL+EILEIPSPTGY KE+M YLE FLKEN V FYYTNKGAL+AGNH +P+LVVI
Sbjct: 1 MERIVKILREILEIPSPTGYTKEVMSYLEKFLKENEVNFYYTNKGALIAGNHPKPELVVI 60
Query: 61 AHVDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHV 120
AHVDTLGAMVKEILP+GHLAFSRIGGL+LPTFEGEYCTIITR+GKKFRGTLLLRNPS HV
Sbjct: 61 AHVDTLGAMVKEILPDGHLAFSRIGGLVLPTFEGEYCTIITRKGKKFRGTLLLRNPSAHV 120
Query: 121 NKDAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYINGFIKSHFLDDK 180
N++ GKKER EENMYIRLDELVEK+EDTEKLGIRPGD+IAFDPKFEY+NGF+KSHFLDDK
Sbjct: 121 NREVGKKERKEENMYIRLDELVEKREDTEKLGIRPGDFIAFDPKFEYVNGFVKSHFLDDK 180
Query: 181 ASVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGGSAGYPPSARELLVVDMGVVGEGVS 240
ASVA ILDLI DM +ELEKYPVAFFFSPYEEVGHGGSAGYPP+ +ELLVVDMGVVGEGVS
Sbjct: 181 ASVAAILDLIIDMKDELEKYPVAFFFSPYEEVGHGGSAGYPPTTKELLVVDMGVVGEGVS 240
Query: 241 GKETAVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYGSDGSAALRAGWDFRV 300
GKETAVSIAAKDTT PYDYDMT RLIELAE+NNIPYVVDVFPYYGSDGSAALRAGWDFRV
Sbjct: 241 GKETAVSIAAKDTTGPYDYDMTNRLIELAEENNIPYVVDVFPYYGSDGSAALRAGWDFRV 300
Query: 301 ALIGPGVHASHGMERTHVKGLLATKELLRAYIE 333
ALIGPGVHASHGMERTHVKGLLATKEL+RAYI+
Sbjct: 301 ALIGPGVHASHGMERTHVKGLLATKELIRAYIK 333
>pir||C69830 glucanase homolog yhfE - Bacillus subtilis
>gi|2226238|emb|CAA74526.1| (Y14083) hypothetical
protein [Bacillus subtilis] >gi|2633356|emb|CAB12860.1|
(Z99109) similar to glucanase [Bacillus subtilis]
Length = 346
Score = 310 bits (785), Expect = 2e-83
Identities = 162/339 (47%), Positives = 224/339 (65%), Gaps = 6/339 (1%)
Query: 1 MERVVKILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVA---GNHREPKL 57
+ + ++++KE++ IPSPTG E++ Y+ES LKE V+ +KG L+A G
Sbjct: 4 VRKTMELIKELVSIPSPTGNTYEVINYIESLLKEWKVETVRNHKGGLIATLPGRDTSRHR 63
Query: 58 VVIAHVDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPS 117
++ AHVDTLGAMVKEI +G L IGG + EGEYC I T GK + GT+L+ S
Sbjct: 64 MLTAHVDTLGAMVKEIKADGRLKIDLIGGFRYNSIEGEYCQIETASGKMYTGTILMHQTS 123
Query: 118 MHVNKDAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYIN-GFIKSHF 176
+HV KDAGK ER +ENM IRLDE V ++DTE+LGI GD+++FDP+ E + GFIKS
Sbjct: 124 VHVYKDAGKAERNQENMEIRLDEPVHCRKDTEELGIGVGDFVSFDPRVEITSSGFIKSRH 183
Query: 177 LDDKASVAVILDLIADMG-EELE-KYPVAFFFSPYEEVGHGGSAGYPPSARELLVVDMGV 234
LDDKASVA++L LI ++ E++E Y F S EE+G+GG++ PP E L VDMG
Sbjct: 184 LDDKASVALLLRLIHEIQTEDIELPYTTHFLISNNEEIGYGGNSNIPPETVEYLAVDMGA 243
Query: 235 VGEGVSGKETAVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYGSDGSAALRA 294
+G+G + E +VSI KD + PY Y + L++LAE+++I Y +D++PYYGSD SAA+++
Sbjct: 244 IGDGQATDEYSVSICVKDASGPYHYQLRKHLVQLAEKHHIDYKLDIYPYYGSDASAAIKS 303
Query: 295 GWDFRVALIGPGVHASHGMERTHVKGLLATKELLRAYIE 333
G D LIGPG+ ASH ERTH L T +LL Y++
Sbjct: 304 GHDIVHGLIGPGIDASHAFERTHKSSLRHTAKLLYYYVQ 342
>pir||A75456 conserved hypothetical protein - Deinococcus radiodurans (strain
R1) >gi|6458670|gb|AAF10522.1|AE001947_5 (AE001947)
conserved hypothetical protein [Deinococcus radiodurans]
Length = 343
Score = 219 bits (553), Expect = 3e-56
Identities = 131/336 (38%), Positives = 184/336 (53%), Gaps = 4/336 (1%)
Query: 1 MERVVKILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALV--AGNHREPKLV 58
++ + +L +L PSPTG+ + + +E L + +V T KGAL +
Sbjct: 6 LDYTLDVLLRLLATPSPTGFTEAALALVEGELHKLSVPSQRTRKGALTWEVPGSGAGHVT 65
Query: 59 VIAHVDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSM 118
HVDTLGAMVK I PNG L +GG T EGE + + G+ GT++ S
Sbjct: 66 YSGHVDTLGAMVKAIKPNGRLLLWPLGGYDWATVEGEDVLVHRQNGETVSGTVVNVRQST 125
Query: 119 HVNKDAGKKERTEEN-MYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYIN-GFIKSHF 176
HV+ A + R E M +RLD + +T LGI GD+++FD + G++K+
Sbjct: 126 HVHGAALRDLRREAAVMEVRLDAVTGSAAETRGLGIGVGDFVSFDARPRLTPAGYVKARH 185
Query: 177 LDDKASVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGGSAGYPPSARELLVVDMGVVG 236
LD+KA+VAV L + + + VAF + YEEVGHG + G PP EL+ VDM VG
Sbjct: 186 LDNKAAVAVFLTVTRALLQSPPVKTVAFHVTTYEEVGHGAATGIPPHTDELIAVDMAAVG 245
Query: 237 EGVSGKETAVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYGSDGSAALRAGW 296
+G + E V++ D PYD+ + RL A + + VD++P+Y SDG+AA RAG
Sbjct: 246 DGQTSSEHHVTLCVADGGGPYDHALGNRLRAAAARAGVELRVDIYPFYSSDGTAAWRAGG 305
Query: 297 DFRVALIGPGVHASHGMERTHVKGLLATKELLRAYI 332
D+ VALIGPGV ASH ERTH L AT L+ AY+
Sbjct: 306 DYPVALIGPGVDASHAYERTHTDALDATAALMLAYV 341
>pir||D83214 conserved hypothetical protein PA3461 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949603|gb|AAG06849.1|AE004766_10 (AE004766)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 398
Score = 213 bits (537), Expect = 2e-54
Identities = 128/334 (38%), Positives = 187/334 (55%), Gaps = 8/334 (2%)
Query: 6 KILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVA---GNHREPKLVVIAH 62
++L E+L IPSPTG+ I+ Y+ L E V F T +G + A G P V AH
Sbjct: 14 RVLLEMLAIPSPTGFTDTIVRYVAEQLDELGVPFEMTRRGTIRATLQGRLNTPDRAVSAH 73
Query: 63 VDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHV-N 121
+DT+GA+V+EI PNG L + +G EG T+ T +G FRG++L S H N
Sbjct: 74 LDTIGALVREIKPNGRLGLAPVGCWSSRFAEGSRVTVFTEQGV-FRGSVLPLLASGHAFN 132
Query: 122 KDAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYI-NGFIKSHFLDDK 180
+ + + +N+ +RLD + D+E LGI GDY+AFDP E+ +G I + LDDK
Sbjct: 133 TEVDNLKISWDNIELRLDAYTASRADSESLGISVGDYVAFDPLPEFTESGHISARHLDDK 192
Query: 181 ASVAVILDLIADMGEELEKYPVAF--FFSPYEEVGHGGSAGYPPSARELLVVDMGVVGEG 238
A VA +L + + E ++ P+ F+ EEVG G + P E + +D+ V EG
Sbjct: 193 AGVAALLAALKAVKESGQEPPIDCHPLFTITEEVGSGAAGALPWDVSEFVGIDIAPVAEG 252
Query: 239 VSGKETAVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYGSDGSAALRAGWDF 298
+ E +VS+A +D+ PYD+ ++ L+ L E+++I D+F YY SD +A+ AG D
Sbjct: 253 QNSNEHSVSVAMQDSGGPYDFHLSRHLLRLGERHDIALRRDLFRYYHSDAQSAIAAGHDT 312
Query: 299 RVALIGPGVHASHGMERTHVKGLLATKELLRAYI 332
R AL+ G A+HG ERTH+ L A LL AYI
Sbjct: 313 RAALLAFGCDATHGYERTHIDSLAALSRLLTAYI 346
>pir||S72475 glucanase (EC 3.2.1.-) - Anabaena variabilis
>gi|1523802|emb|CAA66983.1| (X98339) glucanase [Anabaena
variabilis]
Length = 346
Score = 85.8 bits (209), Expect = 6e-16
Identities = 87/339 (25%), Positives = 156/339 (45%), Gaps = 19/339 (5%)
Query: 8 LKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVA---GNHREPKLVVIAHVD 64
++E++ SP+G EI L V+ + ++A G + + + + AH D
Sbjct: 11 IEELVMHHSPSGAETEINQLLLQKFAALGVEVWSDRADNIIAKIPGKNSDIAVAITAHKD 70
Query: 65 TLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHVNKDA 124
+GA+VK I G + ++GG P GE + + G +L S HV+ ++
Sbjct: 71 EIGAIVKNIGDAGKVEVRKLGGAY-PWVYGEGVVDLLGDNETISG--ILSFGSRHVSHES 127
Query: 125 GKKERTEENMYIRLDELVEKKEDTEKL---GIRPGDYIAFDPKFEY---INGFIKSHFLD 178
+K + E+ + +E K TE+L GIRPG + + + I S+ LD
Sbjct: 128 PQKVQQEDTAVKWENAWIETKRTTEELEAAGIRPGTRMVIGKHRKRPVRLQDHIASYTLD 187
Query: 179 DKASVAVILDLIADMGEE-LEKYPVAFFFSPYEEVGHGGSAGYPPSAR--ELLVVDMGVV 235
+KASVA++L L+ + + ++ Y VA S EEVG G+ + + + L+ +++ +
Sbjct: 188 NKASVAILLALVQQLKQPAIDVYLVA---SAKEEVGAIGALFFTQNQQLDALIALEICPL 244
Query: 236 GEGVSGKETAVSIA-AKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYGSDGSAALRA 294
E K++ + +D YD + L + A+Q N+ + +GSD S A++
Sbjct: 245 SEEYPVKDSENPVLLVQDAYGIYDEGLNGELRQCAKQLNMSVQLTTLSGFGSDASIAMKF 304
Query: 295 GWDFRVALIGPGVHASHGMERTHVKGLLATKELLRAYIE 333
G R A + +HG E H+ + LL+A+ E
Sbjct: 305 GHVGRAACLAFPTQNTHGYEIAHLGAISNCINLLKAFCE 343
>pir||A69984 endo-1,4-beta-glucanase homolog ysdC - Bacillus subtilis
>gi|1770012|emb|CAA99585.1| (Z75208) hypothetical
protein [Bacillus subtilis] >gi|2635347|emb|CAB14842.1|
(Z99118) similar to endo-1,4-beta-glucanase [Bacillus
subtilis]
Length = 361
Score = 85.8 bits (209), Expect = 6e-16
Identities = 72/305 (23%), Positives = 140/305 (45%), Gaps = 19/305 (6%)
Query: 1 MERVVKILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVA---GNHREPKL 57
++ + +LK++ + G +E+ ++S+++ + G+L+A G PK+
Sbjct: 4 LDETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAENGPKI 63
Query: 58 VVIAHVDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPS 117
++ H+D +G MV +I G + F +GG + TI+T++G + G + + P
Sbjct: 64 MIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKG-EITGVIGSKPPH 122
Query: 118 MHVNKDAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYING--FIKSH 175
+ ++ +A KK ++M+I D +E+ + G+ PGD I +F +N F+ +
Sbjct: 123 I-LSPEARKKSVEIKDMFI--DIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAK 179
Query: 176 FLDDKASVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGG--SAGYPPSARELLVVDMG 233
D++ A+ +D++ ++ V + EEVG G +A + VD+G
Sbjct: 180 AWDNRIGCAIAIDVLRNLQNTDHPNIVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVG 239
Query: 234 VVGE--GVSGKETAVSIAAKDTTTPYDYDMTTR------LIELAEQNNIPYVVDVFPYYG 285
+ G+ G+S KE + YD M + ++ AE+ IPY D G
Sbjct: 240 IAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIPYQFDAIAGGG 299
Query: 286 SDGSA 290
+D A
Sbjct: 300 TDSGA 304
>pir||A72609 probable deblocking aminopeptidase APE1335 - Aeropyrum pernix
(strain K1) >gi|5105013|dbj|BAA80327.1| (AP000061) 339aa
long hypothetical deblocking aminopeptidase [Aeropyrum
pernix]
Length = 339
Score = 80.8 bits (196), Expect = 2e-14
Identities = 56/219 (25%), Positives = 112/219 (50%), Gaps = 6/219 (2%)
Query: 4 VVKILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVAG-NHREPKLVVIAH 62
+++ L+E++ P P+G+ + + S L+E + G +V + EP+L+ AH
Sbjct: 1 MLETLRELVFTPGPSGFEDLVRSVVVSRLRELGLDPVVDELGNVVVNPSGGEPRLLAAAH 60
Query: 63 VDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHVNK 122
+D LG ++ + +G LAF ++GG+ G++ I+ G + G + + P H+
Sbjct: 61 MDELGFVITGVGDDGLLAFRKLGGIDDRILPGQHVEILLDGGARIEGVIGITPP--HLQL 118
Query: 123 DAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYING--FIKSHFLDDK 180
D G+ E+ +R+D + + + E+LG++P F + + G + S DD+
Sbjct: 119 DRGEAEKPLRWHELRIDIGAQSRAEAEELGVKPLQPAVFKKHWSTLAGGRALASRGFDDR 178
Query: 181 ASVAVILDLIADMGE-ELEKYPVAFFFSPYEEVGHGGSA 218
A VA++L+L + E ++ +A ++ EEVG G++
Sbjct: 179 AGVALLLELAKRIAEGRVDAGGIALAWTVQEEVGLRGAS 217
>dbj|BAB06851.1| (AP001517) endo-1,4-beta-glucanase [Bacillus halodurans]
Length = 361
Score = 80.8 bits (196), Expect = 2e-14
Identities = 78/307 (25%), Positives = 139/307 (44%), Gaps = 23/307 (7%)
Query: 1 MERVVKILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVA---GNHREPKL 57
++ +++LKE+ + G +E + ++ + G+LVA G PK+
Sbjct: 4 LDERLQMLKELTDANGIPGNEREARDVMRKHIEPFADEVTTDKLGSLVAKKVGKEDGPKI 63
Query: 58 VVIAHVDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPS 117
+V H+D +G MV I G L F +GG + T++T++G G + + P
Sbjct: 64 MVAGHLDEIGFMVTSIDDKGFLRFQTVGGWWEQVMLAQRVTVMTKKG-NIPGVIGSKPPH 122
Query: 118 MHVNKDAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYING--FIKSH 175
+ + +A KK +++M+I D V KE+ + G+RPGD I F + ++ +
Sbjct: 123 I-LPAEARKKPVDKKDMFI--DIGVASKEEALEFGVRPGDSIVPVCDFTVMKNEKYLMAK 179
Query: 176 FLDDKASVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGG---SAGY-PPSARELLVVD 231
D++ A+ +D++ ++ V + EEVG G SA Y P VD
Sbjct: 180 AWDNRIGCAIAIDVLRELKGTNHPNVVYGVGTVQEEVGLRGARTSAHYIKPDIG--FGVD 237
Query: 232 MGVVGE--GVSGKETAVSIAAKDTTTPYDYDMTTR------LIELAEQNNIPYVVDVFPY 283
+G+ G+ GV+ KE + YD M + + ++A+++NIPY D
Sbjct: 238 VGIAGDTPGVTEKEALAKMGEGPQIVLYDASMVSHKGLRDFVTDIADEHNIPYQFDAMAG 297
Query: 284 YGSDGSA 290
G+D A
Sbjct: 298 GGTDSGA 304
>pir||E75067 aminopeptidase m42 PAB2375 [imported] - Pyrococcus abyssi (strain
Orsay) >gi|5458947|emb|CAB50434.1| (AJ248287)
aminopeptidase from family M42 [Pyrococcus abyssi]
Length = 331
Score = 79.6 bits (193), Expect = 5e-14
Identities = 70/286 (24%), Positives = 129/286 (44%), Gaps = 16/286 (5%)
Query: 3 RVVKILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVAGNHREPKLVVIAH 62
R+++ LKE +IP +GY + I + +K+ +V + +L+ +AH
Sbjct: 2 RIIEELKEFTQIPGISGYEERIRERIIEEIKDFADYKVDAIGNLIVELGEGDERLLFMAH 61
Query: 63 VDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHVNK 122
+D +G ++ I +G L F ++GG+ G + +++T K G + P H++
Sbjct: 62 MDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVT-EDKIIDGVIGAIPP--HLSL 118
Query: 123 DAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYING-FIKSHFLDDKA 181
GK + I D E KE+ +L ++P D+ F F +NG ++ + LDD+
Sbjct: 119 GKGKDVIPWHELVI--DIGAESKEEALEL-VKPLDFAVFKKHFSVLNGRYVSTRSLDDRF 175
Query: 182 SVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGGSA----GYPPSARELLVVDMGVVGE 237
V +++ I D+ + V F F+ EE+G G+ Y P +D
Sbjct: 176 GVVALIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAP--EYAFAIDSFACCN 233
Query: 238 GVSGKET---AVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDV 280
++G I A D + Y D+ +++ +AE+N IP + V
Sbjct: 234 ELTGDVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGV 279
>pir||B71165 hypothetical protein PH0519 - Pyrococcus horikoshii
>gi|3256924|dbj|BAA29607.1| (AP000002) 332aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 332
Score = 78.0 bits (189), Expect = 1e-13
Identities = 80/343 (23%), Positives = 148/343 (42%), Gaps = 19/343 (5%)
Query: 1 MERVVKILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVAGNHREPKLVVI 60
M +++ LK+ +IP +GY + I + +K+ +V E +++ +
Sbjct: 1 MMSMIEKLKKFTQIPGISGYEERIREEIIREIKDFADYKVDAIGNLIVELGEGEERILFM 60
Query: 61 AHVDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHV 120
AH+D +G ++ I G L F ++GG+ G + ++T +G G + P + +
Sbjct: 61 AHMDEIGLLITGITDEGKLRFRKVGGIDDRLLYGRHVNVVTEKG-ILDGVIGATPPHLSL 119
Query: 121 NKDAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYING-FIKSHFLDD 179
+D + + +D E KE+ +L ++P D+ F F +NG ++ + LDD
Sbjct: 120 ERDKSVIPWYD----LVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNGKYVSTRGLDD 174
Query: 180 KASVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGGSA----GYPPS---ARELLVVDM 232
+ V +++ I D+ + + V F F+ EEVG G+ Y P A +
Sbjct: 175 RFGVVALIEAIKDLVDHELEGKVIFAFTVQEEVGLKGAKFLANHYYPQYAFAIDSFACCS 234
Query: 233 GVVGEGVSGKETAVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYGSDGSAAL 292
+ G+ GK I A D + Y D+ ++ +AE+N I + V G A+
Sbjct: 235 PLTGDVKLGKGPV--IRAVDNSAIYSRDLARKVWSIAEKNGIEIQIGV---TGGGTDASA 289
Query: 293 RAGWDFRVALIGPGVHASHGMERTHVKGLLATKELLRAYIEEL 335
+AL P + +E H+ L +L+ A EL
Sbjct: 290 FQDRSKTLALSVPIKYLHSEVETLHLNDLEKLVKLIEALAFEL 332
>pir||E71029 probable Frv operon protein FrvX - Pyrococcus horikoshii
>gi|3257954|dbj|BAA30637.1| (AP000006) 353aa long
hypothetical Frv operon protein FrvX [Pyrococcus
horikoshii]
Length = 353
Score = 76.5 bits (185), Expect = 4e-13
Identities = 92/351 (26%), Positives = 157/351 (44%), Gaps = 33/351 (9%)
Query: 6 KILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVAGN---HRE---PKLVV 59
++LK+++E P +GY E + + ++E +K Y GN H++ PK+++
Sbjct: 10 ELLKKVVEAPGVSGY--EFLGIRDVVIEE--IKDYVDEVKVDKLGNVIAHKKGEGPKVMI 65
Query: 60 IAHVDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMH 119
AH+D +G MV I NG L + IGG+ T + + +GK G P H
Sbjct: 66 AAHMDQIGLMVTHIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPP--H 123
Query: 120 VNKDAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYI--NGFIKSHFL 177
+ K +K+ + + I +D E KE+ E +G++ G I +D + E + + F+ F
Sbjct: 124 IQKPEDRKKAPDWDQ-IFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFVSIAF- 181
Query: 178 DDKASVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGGSA----GYPPSARELLVVDMG 233
DD+ +V IL++ + + K V F + EEVG G+ G P + V +
Sbjct: 182 DDRIAVYTILEVAKQLKD--AKADVYFVATVQEEVGLRGARTSAFGIEPDYGFAIDVTIA 239
Query: 234 VVGEGVS--------GKETAVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYG 285
G GK TA+ I D + + L ELA+++ IPY +++ G
Sbjct: 240 ADIPGTPEHKQVTHLGKGTAIKI--MDRSVICHPTIVRWLEELAKKHEIPYQLEILLGGG 297
Query: 286 SD-GSAALRAGWDFRVALIGPGVHASHGMERTHVKGLLATKELLRAYIEEL 335
+D G+ L AL P + E + + AT EL+ +E +
Sbjct: 298 TDAGAIHLTKAGVPTGALSVPARYIHSNTEVVDERDVDATVELMTKALENI 348
>pir||D75105 aminopeptidase m42 PAB0437 [imported] - Pyrococcus abyssi (strain
Orsay) >gi|5458068|emb|CAB49557.1| (AJ248285)
aminopeptidase from family M42 [Pyrococcus abyssi]
Length = 348
Score = 73.7 bits (178), Expect = 3e-12
Identities = 81/305 (26%), Positives = 140/305 (45%), Gaps = 32/305 (10%)
Query: 6 KILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVAGN---HRE---PKLVV 59
++LK+++E P +GY E + + ++E +K Y GN HR+ PK+++
Sbjct: 5 ELLKKVVEAPGVSGY--EFLGIRDVVIEE--IKDYVDEVKVDKLGNVIAHRKGEGPKVMI 60
Query: 60 IAHVDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMH 119
AH+D +G MV I NG L + IGG+ T + + + K G P H
Sbjct: 61 AAHMDQIGLMVTNIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKDKFIYGVGASVPP--H 118
Query: 120 VNKDAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYI--NGFIKSHFL 177
+ K +K+ E + I +D E KE+ E++G+R G I +D + E + + F+ F
Sbjct: 119 IQKPEERKKAPEWDQ-IFIDIGAESKEEAEEMGVRIGTVITWDGRLERLGKHRFVSIAF- 176
Query: 178 DDKASVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGG--SAGYPPSARELLVVDMGVV 235
DD+ +V +L++ + E K V F + EEVG G ++ + +D+ +
Sbjct: 177 DDRIAVYTMLEVARQL--EDTKADVYFVATVQEEVGLRGARTSAFAIEPDYGFAIDVTIA 234
Query: 236 GEGVS----------GKETAVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYG 285
+ GK TA+ I D + + L ELA++ IPY +++ G
Sbjct: 235 ADVPGTPEHKQVTHLGKGTAIKI--MDRSVICHPTIVRWLEELAKKYEIPYQLEILLGGG 292
Query: 286 SDGSA 290
+D A
Sbjct: 293 TDAGA 297
>pir||JC5634 deblocking aminopeptidase (EC 3.4.11.-) [validated] - Pyrococcus
furiosus
Length = 348
Score = 73.4 bits (177), Expect = 4e-12
Identities = 80/305 (26%), Positives = 138/305 (45%), Gaps = 32/305 (10%)
Query: 6 KILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVAGN---HRE---PKLVV 59
++LK+++E P +GY E M + ++E +K Y GN H++ PK+++
Sbjct: 5 ELLKKVVEAPGVSGY--EFMGIRDVVIEE--IKDYVDEVNVDKLGNVIAHKKGEGPKVMI 60
Query: 60 IAHVDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMH 119
AH+D +G MV I NG L + IGG+ T + + +GK G P H
Sbjct: 61 AAHMDQIGLMVTHIEKNGFLRVAPIGGIDPRTLIAQRFNVWIDKGKFIYGVGGSVPP--H 118
Query: 120 VNKDAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYI--NGFIKSHFL 177
+ K +K+ + + I +D E KE+ E+LG++ G + +D + E + + F+ F
Sbjct: 119 IQKPEDRKKAPDWDQ-IFIDIGAESKEEAEELGVKIGTIVTWDGRLERLGKHRFVSIAF- 176
Query: 178 DDKASVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGGSA----GYPPSARELLVVDMG 233
DD+ +V +++ + + K + F + EEVG G+ G P + V +
Sbjct: 177 DDRIAVYTLIETARQLQD--TKADIYFVATVQEEVGLRGARTSAFGINPDYGFAIDVTIA 234
Query: 234 VVGEGVS--------GKETAVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYG 285
G GK TA+ I D + + + ELA++ IPY D+ G
Sbjct: 235 ADVPGTPEHKQVTQLGKGTAIKI--MDRSVICHPTIVRWMEELAKKYEIPYQWDILLGGG 292
Query: 286 SDGSA 290
+D A
Sbjct: 293 TDAGA 297
>pir||D82912 Endo-1,4-beta-glucanase UU280 [imported] - Ureaplasma urealyticum
>gi|6899252|gb|AAF30689.1|AE002124_11 (AE002124)
Endo-1,4-beta-glucanase [Ureaplasma urealyticum]
Length = 363
Score = 72.6 bits (175), Expect = 6e-12
Identities = 83/347 (23%), Positives = 156/347 (44%), Gaps = 34/347 (9%)
Query: 10 EILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALV---AGNHREPKLVVIAHVDTL 66
E +EI + + + + L++ LK+ V + N G+++ +++ PK+++ H+D +
Sbjct: 15 EYMEIYGMSRHEERVASKLKASLKDAGVDYERDNLGSIIFKKTNSNKGPKILIATHMDEV 74
Query: 67 GAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHV-NKDAG 125
G +V++IL NG L S +GG+ G + +++ G + + S+H+ +A
Sbjct: 75 GFVVQQILDNGQLLLSMVGGVWPNIAIGSVAKVYVDEQRQYTG--VFGHTSIHILEPEAR 132
Query: 126 KKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFD-PKFE-YINGFIKSHFLDDKASV 183
K + +++ D K+ LGI G + + P Y +I +D++ SV
Sbjct: 133 SKAVPVKELFV--DCGFNSKQQAIDLGIEIGTEVYMEGPTLNFYDENYIVGKAVDNRVSV 190
Query: 184 AVILDLIADMGEELEKYPVAFFFSPYEEVGHGGSAGYPPSARELLVVDMGVVGEGVSGKE 243
AV+ LI + +++ F + EEVG G+ + D+G+V + + +
Sbjct: 191 AVLDLLIHSLKDKVIPNQTYFAATVQEEVGLRGAKTVVSKVKP----DIGIVIDTTTSHD 246
Query: 244 T------------AVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYGSDGSAA 291
T V I KD T + + ELA ++NIP V G+D +
Sbjct: 247 TYKCPEGDTKLNDGVCIRIKDGGTLVNPKLVKYFEELAIKHNIPLYKYVARGGGTD-AEE 305
Query: 292 LRAGWDFRVALIGPGV-----HASHGMERTHVKGLLATKELLRAYIE 333
L+ G + V IG + HA G+ VK + A +L+R ++E
Sbjct: 306 LQYGPNGGVLTIGLSIPQRYLHAPIGV--ATVKDIKAAFDLVREFLE 350
>pir||D75152 aminopeptidase m42 PAB2096 [imported] - Pyrococcus abyssi (strain
Orsay) >gi|5457809|emb|CAB49299.1| (AJ248284)
aminopeptidase from family M42 [Pyrococcus abyssi]
Length = 346
Score = 71.8 bits (173), Expect = 1e-11
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 10/216 (4%)
Query: 6 KILKEILEIPSPTGY-MKEIMPYLESFLKENNVKFYYTNKGALVAG-NHREPKLVVIAHV 63
K+++EI+E P +GY I + LKE + G ++A P+++V AH+
Sbjct: 5 KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHM 64
Query: 64 DTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHVNKD 123
D +G MV I NG+L IGG+L T + T +G+++ +L +D
Sbjct: 65 DKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQD 124
Query: 124 AGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYINGF-IKSHFLDDKAS 182
G K ++ I +D KE+ E++G + G F P F ++ + +LDD+
Sbjct: 125 KGGKIDWDQ---IVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRIC 181
Query: 183 VAVILDLIADMGE-ELEKYPVAFFFSPYEEVGHGGS 217
+ +++ +GE E + Y VA S EEVG G+
Sbjct: 182 LYAMIEAARQLGEHEADVYIVA---SVQEEVGLRGA 214
>pir||E71193 probable operon protein Frv - Pyrococcus horikoshii
>gi|3258257|dbj|BAA30940.1| (AP000007) 354aa long
hypothetical operon protein Frv [Pyrococcus horikoshii]
Length = 354
Score = 71.0 bits (171), Expect = 2e-11
Identities = 60/216 (27%), Positives = 102/216 (46%), Gaps = 10/216 (4%)
Query: 6 KILKEILEIPSPTGYMK-EIMPYLESFLKENNVKFYYTNKGALVAG-NHREPKLVVIAHV 63
K+++EI+E P +GY I + LKE + G ++A P+++V AH+
Sbjct: 13 KLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGSSPRIMVAAHM 72
Query: 64 DTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHVNKD 123
D +G MV I +G+L IGG+L T + T +G+++ +L +D
Sbjct: 73 DKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQED 132
Query: 124 AGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYINGF-IKSHFLDDKAS 182
G K ++ I +D KE+ E++G R G F P F +N + +LDD+
Sbjct: 133 KGSKIDWDQ---IVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRIC 189
Query: 183 VAVILDLIADMGE-ELEKYPVAFFFSPYEEVGHGGS 217
+ +++ +G+ E + Y V S EEVG G+
Sbjct: 190 LYAMIEAARQLGDHEADIYIVG---SVQEEVGLRGA 222
>dbj|BAB06976.1| (AP001518) endo-1,4-beta-glucanase [Bacillus halodurans]
Length = 357
Score = 70.6 bits (170), Expect = 2e-11
Identities = 80/339 (23%), Positives = 138/339 (40%), Gaps = 25/339 (7%)
Query: 7 ILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVA---GNHREPKLVVIAHV 63
+ K + E+ G+ I ++ L++ + G++ GN + PK++V H+
Sbjct: 8 LFKTLTELQGAPGFEHHIRRFVRGELEKYTNEIVQDRLGSIFGVKRGNEQGPKVMVAGHM 67
Query: 64 DTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHVNKD 123
D +G MV I G + F +GG + I+T G ++ + H+ ++
Sbjct: 68 DEVGFMVTSINEKGLIRFQTLGGWWSQVLLAQRVQIMTDEGPVIG---VIGSTPPHLLEE 124
Query: 124 AGKKERTE-ENMYIRLDELVEKKEDTEKLGIRPGDYIA----FDPKFEYINGFIKSHFLD 178
A +K+ + +NMYI D + KED +K+GI+PG I F P I + D
Sbjct: 125 AQRKKPMDVKNMYI--DIGADDKEDAQKIGIKPGQQIVPICPFTPLAN--EKKIMAKAWD 180
Query: 179 DKASVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGGSAGYPPSARE--LLVVDMGVVG 236
++ V + ++L+ ++ E + + EEVG G+A +D
Sbjct: 181 NRYGVGLAIELLKELQGETTPNILYSGATVQEEVGLRGAATSAQMIEPDIFYALDASPAN 240
Query: 237 EGVSGKETAVSIAAKDTTTPYDYDMTTR------LIELAEQNNIPYVVDVFPYYGSDGSA 290
+ +GK+ + YD M T +++ AE NIPY + G+D
Sbjct: 241 DATAGKDAFGQLGKGALVRIYDRTMVTHRGIRDFVLDTAETENIPYQFFI-SQGGTDAGR 299
Query: 291 ALRAGWDFRVALIGPGVHASH-GMERTHVKGLLATKELL 328
+G A+IG H HV A K LL
Sbjct: 300 VHLSGNGVPSAVIGICSRYIHTAASIIHVDDYAAAKALL 338
>pir||C72301 endoglucanase - Thermotoga maritima (strain MSB8)
>gi|4981591|gb|AAD36126.1|AE001765_5 (AE001765)
endoglucanase [Thermotoga maritima]
Length = 339
Score = 69.9 bits (168), Expect = 4e-11
Identities = 80/344 (23%), Positives = 146/344 (42%), Gaps = 32/344 (9%)
Query: 8 LKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYT----NKGALVAGNHREPKLVVIAHV 63
LKE+ +P +G ++ +++S + E V YT N AL G KL+V AH+
Sbjct: 3 LKELSMMPGVSGDEGKVRDFIKSKI-EGLVDNLYTDVLGNLIALKRGRDSSKKLLVSAHM 61
Query: 64 DTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHVNKD 123
D +G +V +I +G ++F +GG+ G+ + K +G + R +H+ +D
Sbjct: 62 DEVGFVVSKIEKDGKVSFLPVGGVDPRILPGKVVQV-----KNLKGVIGYR--PIHLQRD 114
Query: 124 AGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYINGFIKSHFLDDKASV 183
EN +R+D ++ +K + GDY++F + NG DD+A
Sbjct: 115 EENTPPRFEN--LRIDFGFSSADEAKKY-VSIGDYVSFVSDYIEKNGRAVGKAFDDRAGC 171
Query: 184 AVILDLIADMGEELEKYPVAFFFSPYEEVGHGGSAGYPPSARE--LLVVDMGVVGEGVS- 240
+V++D++ + G Y F F+ EE G GSA + +VV+ G+
Sbjct: 172 SVLIDVL-ESGVS-PAYDTYFVFTVQEETGLRGSAVVVEQLKPTCAIVVETTTAGDNPEL 229
Query: 241 ---------GKETAVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDVFPYYGSDGSAA 291
G A++ + P + T +++ A+ N+IP+ + G+D
Sbjct: 230 EERKWATHLGDGPAITFYHRGYVIPKEIFQT--IVDTAKNNDIPFQMKRRTAGGTDAGRY 287
Query: 292 LRAGWDFRVALIGPGVHASHGMER-THVKGLLATKELLRAYIEE 334
R + +I H + TK+L++ +EE
Sbjct: 288 ARTAYGVPAGVISTPARYIHSPNSIIDLNDYENTKKLIKVLVEE 331
>sp|Q57975|Y555_METJA HYPOTHETICAL PROTEIN MJ0555 >gi|2127881|pir||C64369 endoglucanase
homolog - Methanococcus jannaschii
>gi|1591260|gb|AAB98546.1| (U67504) endoglucanase (celM)
[Methanococcus jannaschii]
Length = 350
Score = 68.7 bits (165), Expect = 9e-11
Identities = 58/251 (23%), Positives = 121/251 (48%), Gaps = 10/251 (3%)
Query: 4 VVKILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVAGN-HREPKLVVIAH 62
VV+ LK++ ++ +G + +++ L++ N G L+A ++ K+++ AH
Sbjct: 3 VVEYLKKLSKLHGISGREDSVREFMKKELEKYCDSVEIDNFGNLIAKRGNKGKKIMIAAH 62
Query: 63 VDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHVNK 122
+D +G MVK I NG L F++IGG+ PT + + +G +L P + +
Sbjct: 63 MDEIGLMVKYIDDNGFLKFTKIGGIYDPTILNQKVVVHGSKGDLI--GVLGSKPPHRMKE 120
Query: 123 DAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAF-DPKFEYINGFIKSHFLDDKA 181
+ K E+M+I D E +E+ ++G+ G +++F ++ + DD+
Sbjct: 121 EEKTKIIKYEDMFI--DIGAESREEAIEMGVNIGTWVSFLSEVYDLGKNRLTGKAFDDRV 178
Query: 182 SVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGGS--AGYPPSARELLVVDMGVVGE-- 237
AV+L+++ + EE V + EEVG G+ + + + + +D+ + G+
Sbjct: 179 GCAVLLEVMKRLSEEDIDCQVYAVGTVQEEVGLKGARVSAFKINPDVAIALDVTIAGDHP 238
Query: 238 GVSGKETAVSI 248
G+ ++ V +
Sbjct: 239 GIKKEDAPVDL 249
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.140 0.403
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133492210
Number of Sequences: 2977
Number of extensions: 6012841
Number of successful extensions: 14093
Number of sequences better than 1.0e-10: 20
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 14056
Number of HSP's gapped (non-prelim): 20
length of query: 335
length of database: 189,106,746
effective HSP length: 55
effective length of query: 280
effective length of database: 156,189,961
effective search space: 43733189080
effective search space used: 43733189080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 165 (68.7 bits)