BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0883 (mgtE-like) DE:MG2+ TRANSPORT PROTEIN (MGTE)
(398 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75043 mg2+ transport protein (mgte) PAB0883 - Pyrococcus a... 757 0.0
pir||H71116 hypothetical protein PH0703 - Pyrococcus horikoshii ... 554 e-157
gi|11499100 A. fulgidus predicted coding region AF1505 [Archaeog... 203 3e-51
pir||F69053 conserved hypothetical protein MTH1401 - Methanobact... 155 1e-36
pir||T33024 hypothetical protein K07H8.2 - Caenorhabditis elegan... 98 2e-19
pir||T32564 hypothetical protein ZK185.2 - Caenorhabditis elegan... 87 5e-16
gb|AAF46385.1| (AE003444) CG1521 gene product [Drosophila melano... 85 2e-15
gi|8923439 hypothetical protein FLJ20473 [Homo sapiens] >gi|7020... 71 2e-11
dbj|BAB14241.1| (AK022780) unnamed protein product [Homo sapiens] 71 2e-11
pir||A72771 hypothetical protein APE0156 - Aeropyrum pernix (str... 71 3e-11
gi|11431344 hypothetical protein FLJ20473 [Homo sapiens] 70 4e-11
pir||T27671 hypothetical protein ZK1053.6 - Caenorhabditis elega... 69 7e-11
>pir||H75043 mg2+ transport protein (mgte) PAB0883 - Pyrococcus abyssi (strain
Orsay) >gi|5458758|emb|CAB50245.1| (AJ248287) MG2+
TRANSPORT PROTEIN (MGTE) [Pyrococcus abyssi]
Length = 398
Score = 757 bits (1934), Expect = 0.0
Identities = 398/398 (100%), Positives = 398/398 (100%)
Query: 1 MVMRMALKIRENSITSGLIKDAFLVSFPALLLCLLLDFFAGAFLGKFFTLIRTEYPIILV 60
MVMRMALKIRENSITSGLIKDAFLVSFPALLLCLLLDFFAGAFLGKFFTLIRTEYPIILV
Sbjct: 1 MVMRMALKIRENSITSGLIKDAFLVSFPALLLCLLLDFFAGAFLGKFFTLIRTEYPIILV 60
Query: 61 ILPGLMGMRGNIFGAMASRFSTMLYLGEISPSLKDRNVLKNIFLSIVLSLIPVLLLWLVG 120
ILPGLMGMRGNIFGAMASRFSTMLYLGEISPSLKDRNVLKNIFLSIVLSLIPVLLLWLVG
Sbjct: 61 ILPGLMGMRGNIFGAMASRFSTMLYLGEISPSLKDRNVLKNIFLSIVLSLIPVLLLWLVG 120
Query: 121 ALKVRNVDVAIAVLLIVLVSTIYASLFLGTATAITTVLPYKKGIDPDSVAAPIITSVADL 180
ALKVRNVDVAIAVLLIVLVSTIYASLFLGTATAITTVLPYKKGIDPDSVAAPIITSVADL
Sbjct: 121 ALKVRNVDVAIAVLLIVLVSTIYASLFLGTATAITTVLPYKKGIDPDSVAAPIITSVADL 180
Query: 181 ITIPLLVGFILLYPHKQTFIALTVVSIVILGILRGYSKLNREDLKFLRELLTIIGGLALL 240
ITIPLLVGFILLYPHKQTFIALTVVSIVILGILRGYSKLNREDLKFLRELLTIIGGLALL
Sbjct: 181 ITIPLLVGFILLYPHKQTFIALTVVSIVILGILRGYSKLNREDLKFLRELLTIIGGLALL 240
Query: 241 SSITGSLLESYSKLIDSVAIFSVMYPMVLDTTGNLGSIIGAKTSTKLHLEGIEKIINLDI 300
SSITGSLLESYSKLIDSVAIFSVMYPMVLDTTGNLGSIIGAKTSTKLHLEGIEKIINLDI
Sbjct: 241 SSITGSLLESYSKLIDSVAIFSVMYPMVLDTTGNLGSIIGAKTSTKLHLEGIEKIINLDI 300
Query: 301 LKEITVYSLLALPLGIVGNVIGMELTKLLLHRKAEIIPHFILLYPVFVFSVLWFAYFLAI 360
LKEITVYSLLALPLGIVGNVIGMELTKLLLHRKAEIIPHFILLYPVFVFSVLWFAYFLAI
Sbjct: 301 LKEITVYSLLALPLGIVGNVIGMELTKLLLHRKAEIIPHFILLYPVFVFSVLWFAYFLAI 360
Query: 361 VADRAKLDPDNVTVPTITTLSDVFSTLFIVGIAKIVVG 398
VADRAKLDPDNVTVPTITTLSDVFSTLFIVGIAKIVVG
Sbjct: 361 VADRAKLDPDNVTVPTITTLSDVFSTLFIVGIAKIVVG 398
>pir||H71116 hypothetical protein PH0703 - Pyrococcus horikoshii
>gi|3257111|dbj|BAA29794.1| (AP000003) 397aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 397
Score = 554 bits (1411), Expect = e-157
Identities = 274/396 (69%), Positives = 338/396 (85%), Gaps = 1/396 (0%)
Query: 2 VMRMALKIR-ENSITSGLIKDAFLVSFPALLLCLLLDFFAGAFLGKFFTLIRTEYPIILV 60
+MRM LKI+ E I S L+++AFLVSFPALL C+LLDFFAGAFLGKFF+LIR YPIILV
Sbjct: 1 MMRMNLKIKLEKFINSELVRNAFLVSFPALLFCILLDFFAGAFLGKFFSLIRRNYPIILV 60
Query: 61 ILPGLMGMRGNIFGAMASRFSTMLYLGEISPSLKDRNVLKNIFLSIVLSLIPVLLLWLVG 120
+LPGLMGMRGNIFGAMASR ST+LYLGEI P L DR VLKN+FLSI+LSL+P+ +LW++G
Sbjct: 61 MLPGLMGMRGNIFGAMASRLSTLLYLGEIEPKLMDRTVLKNVFLSIMLSLVPMTMLWIIG 120
Query: 121 ALKVRNVDVAIAVLLIVLVSTIYASLFLGTATAITTVLPYKKGIDPDSVAAPIITSVADL 180
A+KVR ++VAIAVLLIV VSTIY S LG+ATA+ T+LPYKKG DPD++AAP+ITS+ADL
Sbjct: 121 AIKVRELEVAIAVLLIVFVSTIYTSFLLGSATALATILPYKKGADPDAIAAPVITSIADL 180
Query: 181 ITIPLLVGFILLYPHKQTFIALTVVSIVILGILRGYSKLNREDLKFLRELLTIIGGLALL 240
+TIPLLVGFILLY ++ F+ + +VS+ IL L+ SKL + D+K RELL+I+ LAL
Sbjct: 181 VTIPLLVGFILLYSNRMAFMGVGLVSLAILVFLKLNSKLEKSDIKTFRELLSILIALALF 240
Query: 241 SSITGSLLESYSKLIDSVAIFSVMYPMVLDTTGNLGSIIGAKTSTKLHLEGIEKIINLDI 300
SSI G++LESYSKLI+ VAI S+MYPM+LDTTGNLG+IIGAKTSTKLHLEGIEKIIN++
Sbjct: 241 SSIAGTILESYSKLIEKVAILSIMYPMILDTTGNLGAIIGAKTSTKLHLEGIEKIINIET 300
Query: 301 LKEITVYSLLALPLGIVGNVIGMELTKLLLHRKAEIIPHFILLYPVFVFSVLWFAYFLAI 360
KEI VYSLLALPL +VGNVIG +T+++L +A ++P FI+LYP+F F V+W AYF+AI
Sbjct: 301 FKEILVYSLLALPLALVGNVIGAGITRVILSVEATVMPTFIILYPLFTFGVMWMAYFIAI 360
Query: 361 VADRAKLDPDNVTVPTITTLSDVFSTLFIVGIAKIV 396
+A+RA LDPDNVTVPTITTLSD+FSTLFIV +A ++
Sbjct: 361 LAERANLDPDNVTVPTITTLSDIFSTLFIVLLAHLI 396
>gi|11499100 A. fulgidus predicted coding region AF1505 [Archaeoglobus fulgidus]
>gi|7483647|pir||H69437 hypothetical protein AF1505 -
Archaeoglobus fulgidus >gi|2649071|gb|AAB89753.1|
(AE000999) A. fulgidus predicted coding region AF1505
[Archaeoglobus fulgidus]
Length = 336
Score = 203 bits (511), Expect = 3e-51
Identities = 117/337 (34%), Positives = 191/337 (55%), Gaps = 3/337 (0%)
Query: 61 ILPGLMGMRGNIFGAMASRFSTMLYLGEISPSLKDRNVLKNIFLSIVLSLIPVLLLWLVG 120
++PGLMG+RGN+FG++ SR ST LYLG P++KD V KN+F SI + IP L+L+L+
Sbjct: 1 MIPGLMGLRGNVFGSLGSRISTSLYLGSSDPTIKDEYVSKNVFFSIWAATIPALILFLIA 60
Query: 121 ALKVRNVDVAIAVLLIVLVSTIYASLFLGTATAITTVLPYKKGIDPDSVAAPIITSVADL 180
ALK + ++L S++ S L TA+ + +++G+DPD++ P +T+ ADL
Sbjct: 61 ALKFFGKEGLTTSFQVILDSSVVISAILAVMTALIVIGSFRRGLDPDNIMGPAVTTFADL 120
Query: 181 ITIPLLVGFILLYPHKQTFIALTVVSIVILGILRGYSKLNREDLKFLRELLTIIGGLALL 240
++IP +V FI L+ TV ++ L + S D K +E L I+ LAL+
Sbjct: 121 VSIPSIVLFIFLFERYTGAWISTVACVIALAMSVYLSIRGGYDGKAYKETLLIVSLLALI 180
Query: 241 SSITGSLLESYSKLIDSVAIFSVMYPMVLDTTGNLGSIIGAKTSTKLHLEGIEKIINLDI 300
SITG++L+ +S++I S YP V+ + GN GSI+ A+TSTKLHL G + L
Sbjct: 181 QSITGNVLQEFSEVIHRALFLSFAYPAVIGSIGNYGSIMVARTSTKLHL-GELSVGKLSD 239
Query: 301 LKEITVYSLLALP-LGIVGNVIGMELTKLLLHRKAEIIPHFILLYPVFVFSVLWFAYFLA 359
+ + S++ P + ++ ++ T + + +F+++Y VL F+ L+
Sbjct: 240 APYVFLTSVVIAPTIYVLASLFASTFTGAPFPEAKDFL-YFMIVYLALAAFVLLFSTTLS 298
Query: 360 IVADRAKLDPDNVTVPTITTLSDVFSTLFIVGIAKIV 396
I R +DPDN +P TTL+D+ T +V +A ++
Sbjct: 299 IWLHRVGVDPDNGGIPLTTTLTDIVGTTAVVVLAYLI 335
>pir||F69053 conserved hypothetical protein MTH1401 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622512|gb|AAB85878.1| (AE000902) unknown
[Methanobacterium thermoautotrophicum]
Length = 446
Score = 155 bits (387), Expect = 1e-36
Identities = 121/394 (30%), Positives = 213/394 (53%), Gaps = 32/394 (8%)
Query: 26 SFPALLLCLLLDFFAGAFLGKFFTLIRTEYPIILVILPGLMGMRGNIFGAMASRFSTMLY 85
SF AL +C + D AG FLGK ++ + YP +LV++PG +GMRGNIFGA+ SR + L+
Sbjct: 60 SFVALFICAIGDLIAGIFLGKMSPMLES-YPGLLVLIPGAIGMRGNIFGALGSRLGSGLH 118
Query: 86 LGEISPSLKDRNVLKN-----IFLSIVLSLIPVLLLWLVGALKVRNVDVAIAVLLIVLVS 140
+G +SP L+ +VL + I L++V+SL + W+ L + +I ++
Sbjct: 119 IGVLSPELRRSDVLADNIEGTIILTVVMSLFLGFMAWIFCQLFGFESMGIMDFTVISVIG 178
Query: 141 TIYASLFLGTATAITTVLPYKKGIDPDSVAAPIITSVADLITIP-LLVGFILLYPHKQTF 199
I + FL AT + ++ Y+ G DPD+V P+I + DL T+P + +L + F
Sbjct: 179 GIISGAFLLPATVLISLKSYENGWDPDNVTTPLIAASGDLFTLPSIFAALAVLEMVRNGF 238
Query: 200 IALTVVSIVIL----GILRGYSKLNREDL-KFLRELLTIIGGLALLSSITGSLLES-YSK 253
+ +I +L G++ G+ R DL K +R+ + ++ + L + G++L S S
Sbjct: 239 FEWILFAIFLLIGAAGLIAGFR--GRYDLRKIIRQSVPVLLICSALGTTAGTVLNSKLSF 296
Query: 254 LIDSVAIFSVMYPMVLDTTGNLGSIIGAKTSTKLHLEGI---------EKIINLDILKEI 304
++D+ AI +++ P+ +G+L SI+GA+ S+ LH GI E + N I I
Sbjct: 297 ILDNPAILALV-PLFSGESGDLVSILGARLSSGLH-SGIIPASLRPHGEALRNFGI---I 351
Query: 305 TVYSLLALP-LGIVGNVIGMELTKLLLHRKAEIIPHFILLYPVFVFSVLWFAYFLAIVAD 363
V SLL P +G++ +++ L L + ++ + Y + F +L ++L+ +
Sbjct: 352 AVLSLLIYPTIGLLAHLVSDFLGIGSLGPFSMVLISSMAGYMLTPF-LLLVGFYLSSASY 410
Query: 364 RAKLDPDNVTVPTITTLSD-VFSTLFIVGIAKIV 396
R +LDPDN+ +P T+++D V +T ++ I I+
Sbjct: 411 RLRLDPDNIVIPLSTSMTDPVANTCLVIAIITIM 444
>pir||T33024 hypothetical protein K07H8.2 - Caenorhabditis elegans
>gi|2911858|gb|AAC04427.1| (AF047659) K07H8.2 gene
product [Caenorhabditis elegans]
Length = 507
Score = 97.5 bits (239), Expect = 2e-19
Identities = 113/405 (27%), Positives = 183/405 (44%), Gaps = 41/405 (10%)
Query: 23 FLVSFPALLLCLLLDFFAGAFLGKFFTL-IRTEYPIILVILPGLMGMRGNIFGAMASRFS 81
F V FP + L + FAG L T + E P IL+++P L+G++GN+ +ASR S
Sbjct: 92 FQVLFPFAVAGLGM-VFAGLVLSIVVTWPLFEEIPEILILVPALLGLKGNLEMTLASRLS 150
Query: 82 TMLYLGEISPSLKDRN-VLKNIFLSIVLSLIPVLLLWLVGA----LKVRNVDVAIAVLLI 136
T+ LG + S + ++ V+ N+ L V + + L A + + D A L+
Sbjct: 151 TLANLGHMDSSKQRKDVVIANLALVQVQATVVAFLASAFAAALAFIPSGDFDWAHGALMC 210
Query: 137 V--LVSTIYASLFLGTATAITTVLPYKKGIDPDSVAAPIITSVADLITIPLLV--GFILL 192
L + ASL L + V K I+PD+VA PI S+ DL T+ +L G + L
Sbjct: 211 ASSLATACSASLVLSLLMVVVIVTSRKYNINPDNVATPIAASLGDLTTLTVLAFFGSVFL 270
Query: 193 YPHKQTFIALTVVSIVILGILRGYSKLNRED---LKFLRELLTIIGGLALLSSITGSLLE 249
H +V ++ L +L + K+ E+ + L T + L+SS G +LE
Sbjct: 271 KAHNTESWLNVIVIVLFLLLLPFWIKIANENEGTQETLYNGWTPVIMSMLISSAGGFILE 330
Query: 250 SYSKLIDSVAIFSVMYPMVLDTTGNLGSIIGAKTSTKLHLEGIEKIINLD---------- 299
+ + S++ + P++ GNL ++ ++ ST H G ++ +
Sbjct: 331 TAVRRYHSLSTYG---PVLNGVGGNLAAVQASRLSTYFHKAGTVGVLPNEWTVSRFTSVQ 387
Query: 300 ---ILKEITVYSLLALPLGIV-GNVIGMELTKLL-LHRKAEIIPH---FILLYPVF---- 347
KE S L L +V G++ L +L L K + PH F LY +
Sbjct: 388 RAFFSKEWDSRSARVLLLLVVPGHICFNFLIQLFTLTSKNNVTPHGPLFTSLYMIAAIIQ 447
Query: 348 VFSVLWFAYFLAIVADRAKLDPDNVTVPTITTLSDVFST--LFIV 390
V +L+ L + + K+DPDN +P +T L D+ T LFIV
Sbjct: 448 VVILLFVCQLLVALLWKWKIDPDNSVIPYLTALGDLLGTGLLFIV 492
>pir||T32564 hypothetical protein ZK185.2 - Caenorhabditis elegans
>gi|2665946|gb|AAB88559.1| (AF036704) ZK185.2 gene
product [Caenorhabditis elegans]
Length = 482
Score = 86.6 bits (211), Expect = 5e-16
Identities = 84/373 (22%), Positives = 171/373 (45%), Gaps = 38/373 (10%)
Query: 46 KFFTLIRTEYPIILVILPGLMGMRGNIFGAMASRFSTMLYLGEISPSLKDRNV-LKNIFL 104
+FFT + P ++++P L+G++GN+ ++SR ST+ LG + NV L N+ L
Sbjct: 94 EFFTTL----PDAVIMVPTLVGLKGNLEMTLSSRLSTLANLGFMESRKDKINVALSNMAL 149
Query: 105 ----SIVLSLIPVLLLWLVGALKVRNVDVAIAVLLIVLVSTIYASLFLGTATAITTVLPY 160
+I +S + V+ + +G + + D + +LL +V+ ASL L +
Sbjct: 150 IQCQAIAVSSLAVIPVLFLGEQAI-SFDDTLCLLLSAVVTASLASLVLSLLMVAVVIAAR 208
Query: 161 KKGIDPDSVAAPIITSVADLITIPLLVGFILLYPHKQTF-------IALTVVSIVILGIL 213
+ ++PD+++ P+ S+ D+ T+ +L+ L H + I L +I I+G +
Sbjct: 209 RWKLNPDNISTPVAASLGDVSTLYILLTVGTLACHMRDLHVTLLIVILLFFYAIAIVGAV 268
Query: 214 RGYSKLNREDLKFLRELLTIIGGLALLSSITGSLLESYSKLIDSVAIFSVMYPMVLDTTG 273
+R L+ L+ I ++++ +G +L+ + +A F P++ G
Sbjct: 269 MAAE--DRFTLEVLKNGWWPILCAMMITTFSGLVLKKSMQTYPPLAAFQ---PLINGLGG 323
Query: 274 NLGSIIGAKTSTKLHLEGIEKIINLDILK-------------EITVYSLLALPLGIVGNV 320
NL ++ ++ ST+LH + I + L+ E + + L + + N+
Sbjct: 324 NLVAVQASRISTQLHRARKNREIEVRSLQTYINPWRAFFGNNEDASAAQILLGISVPSNI 383
Query: 321 IGMELTKLL---LHRKAEIIPHFILLYPVFVFSVLWFAYFLAIVADRAKLDPDNVTVPTI 377
I + + L H F+L+ + V ++L+ L ++DPDN +P +
Sbjct: 384 IFIFIIFLFGVGFHNTTPFTISFVLVCAIQVTTLLYICQILVRAMWIMRIDPDNSAIPFL 443
Query: 378 TTLSDVFSTLFIV 390
T L D+ +L ++
Sbjct: 444 TALGDLIGSLLLI 456
>gb|AAF46385.1| (AE003444) CG1521 gene product [Drosophila melanogaster]
Length = 679
Score = 84.7 bits (206), Expect = 2e-15
Identities = 88/358 (24%), Positives = 165/358 (45%), Gaps = 33/358 (9%)
Query: 58 ILVILPGLMGMRGNIFGAMASRFSTMLYLGEI-SPSLKDRNVLKNIFL----SIVLSLIP 112
+ +++P L+G++GN+ +ASR ST + LG + S R ++ NI L + V S +
Sbjct: 298 LFILVPALLGLKGNLDMCLASRLSTQVNLGNMTSRQGVIRMIVGNIALVQVQATVASFLV 357
Query: 113 VLLLWLVGALKVRNVDVAIAVLLIV-LVSTIYASLFLGTATAITTVL-PYKKGIDPDSVA 170
+ VGA + +LL + T +S F+ + +L K ++PD++A
Sbjct: 358 AMFAVSVGAAMTGDFYFENMMLLTASAMFTATSSCFVLDFVLVAVILFSQKYRLNPDNLA 417
Query: 171 APIITSVADLITIPLLVGFI--LLYPHKQTFIALTVVSI----VILGILRGYSKLNREDL 224
P+ S+ D+++I LL FI LLY H +T + +T + + V+L + N
Sbjct: 418 TPLAASIGDVVSISLL-SFIASLLYDHIKTHLWITFIVVTCYLVLLPMWVMIVLRNEYTR 476
Query: 225 KFLRELLTIIGGLALLSSITGSLLESYSKLIDSVAIFSVMYPMVLDTTGNLGSIIGAKTS 284
L+ + +S + G +L++ ++ + +F P++ GNL S+ +K S
Sbjct: 477 PVLKSGWVPVLSALCISGLGGLVLDAAVEVFNGFVVFQ---PIINGIGGNLVSVQASKIS 533
Query: 285 TKLHLEGIEKII--NLDILK----------EITVYSLLALPLGIVGNVIGMELTKLLLHR 332
T LH I II + I + + + + + I GNV+ + + +
Sbjct: 534 TMLHQSSIIGIIPPHTQIFEWPWRALFKGVPYAKTARILIAMSIPGNVLFIFAADYINYS 593
Query: 333 KAEIIPHFILLY----PVFVFSVLWFAYFLAIVADRAKLDPDNVTVPTITTLSDVFST 386
+ + F+L Y V V +L+ A+ + + K+DPDN +P +T L D+ +
Sbjct: 594 TSTVTWVFVLSYLTASLVQVMLLLYIAHIIVHAMWKWKIDPDNSAIPYLTALGDLLGS 651
>gi|8923439 hypothetical protein FLJ20473 [Homo sapiens]
>gi|7020596|dbj|BAA91192.1| (AK000480) unnamed protein
product [Homo sapiens]
Length = 471
Score = 71.0 bits (171), Expect = 2e-11
Identities = 85/331 (25%), Positives = 146/331 (43%), Gaps = 44/331 (13%)
Query: 91 PSLKDRNVLKNIFL----SIVLSLIPVLLLWLVGALKVRNVDVAIAVLLIV--LVSTIYA 144
P + R + N+ L + V+ L+ + L+G + VDVA LL +++ A
Sbjct: 100 PQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVAKVELLCASSVLTAFLA 159
Query: 145 SLFLGTATAITTVLPYKKGIDPDSVAAPIITSVADLITIPLL-VGFILLYPHKQ------ 197
+ LG + K G++PD++A PI S+ DLIT+ +L + Y HK
Sbjct: 160 AFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILALVSSFFYRHKDSRYLTP 219
Query: 198 ----TFIALTVVSIVILGILRGYSKLNREDLKFLR-ELLTIIGGLALLSSITGSLLESYS 252
+F ALT V ++I +K + +K L+ II LA++ S G L+ S +
Sbjct: 220 LVCLSFAALTPVWVLI-------AKQSPPIVKILKFGWFPII--LAMVISSFGGLILSKT 270
Query: 253 KLIDSVAIFSVMYPMVLDTTGNLGSIIGAKTSTKLHLEGIEKIINLDILK---------- 302
++ P++ GNL +I ++ ST LH+ ++ L + K
Sbjct: 271 VSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPNPCSTFC 330
Query: 303 --EITVYSLLALPLGIV-GNVIGMELTKLLLHRKAEIIPHFILLY----PVFVFSVLWFA 355
EI S L L +V G++I + L+ + F++LY + V +L+ A
Sbjct: 331 TSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLA 390
Query: 356 YFLAIVADRAKLDPDNVTVPTITTLSDVFST 386
+ + LDPDN +P +T L D+ +
Sbjct: 391 EVMVRLTWHQALDPDNHCIPYLTGLGDLLGS 421
>dbj|BAB14241.1| (AK022780) unnamed protein product [Homo sapiens]
Length = 464
Score = 71.0 bits (171), Expect = 2e-11
Identities = 85/331 (25%), Positives = 146/331 (43%), Gaps = 44/331 (13%)
Query: 91 PSLKDRNVLKNIFL----SIVLSLIPVLLLWLVGALKVRNVDVAIAVLLIV--LVSTIYA 144
P + R + N+ L + V+ L+ + L+G + VDVA LL +++ A
Sbjct: 100 PQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVAKVELLCASSVLTAFLA 159
Query: 145 SLFLGTATAITTVLPYKKGIDPDSVAAPIITSVADLITIPLL-VGFILLYPHKQ------ 197
+ LG + K G++PD++A PI S+ DLIT+ +L + Y HK
Sbjct: 160 AFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILALVSSFFYRHKDSRYLTP 219
Query: 198 ----TFIALTVVSIVILGILRGYSKLNREDLKFLR-ELLTIIGGLALLSSITGSLLESYS 252
+F ALT V ++I +K + +K L+ II LA++ S G L+ S +
Sbjct: 220 LVCLSFAALTPVWVLI-------AKQSPPIVKILKFGWFPII--LAMVISSFGGLILSKT 270
Query: 253 KLIDSVAIFSVMYPMVLDTTGNLGSIIGAKTSTKLHLEGIEKIINLDILK---------- 302
++ P++ GNL +I ++ ST LH+ ++ L + K
Sbjct: 271 VSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPNPCSTFC 330
Query: 303 --EITVYSLLALPLGIV-GNVIGMELTKLLLHRKAEIIPHFILLY----PVFVFSVLWFA 355
EI S L L +V G++I + L+ + F++LY + V +L+ A
Sbjct: 331 TSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLA 390
Query: 356 YFLAIVADRAKLDPDNVTVPTITTLSDVFST 386
+ + LDPDN +P +T L D+ +
Sbjct: 391 EVMVRLTWHQALDPDNHCIPYLTGLGDLLGS 421
>pir||A72771 hypothetical protein APE0156 - Aeropyrum pernix (strain K1)
>gi|5103546|dbj|BAA79067.1| (AP000058) 363aa long
hypothetical protein [Aeropyrum pernix]
Length = 363
Score = 70.6 bits (170), Expect = 3e-11
Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 32/351 (9%)
Query: 58 ILVILPGLMGMRGNIFGAMASRFSTMLYLGEISPSLKDRNVL----KNIFLSIVLSLIPV 113
+L + P L + G + +++SR + LG P + + IFL+ V S
Sbjct: 32 LLALYPQLSALTGGLLLSLSSRAISNHVLGGAGPEVYLTGLAVSAASGIFLTTVFSTATS 91
Query: 114 LLLWLVGALKVRNVDVAIAVLLIVLVSTIYASLFLGTATAITTVLPYKKGIDPDSVAAPI 173
+ L G V V A+ LL VL L L T I V+ + G+ PD+V I
Sbjct: 92 IAL---GLEPVMMVPAALITLLGVL-------LVLTLLTWIIIVMLLRLGVSPDNVMPAI 141
Query: 174 ITSVADL-ITIPLLVGFILLYPHKQTFIALTVVSIVILGILRGYSKLNREDLKFLRELLT 232
+TS+ D+ + I +V F ++ + + +V++V + +S D + +
Sbjct: 142 LTSIIDMAVLILAIVAFSMVSRMDE---GIYLVAVVTFSLALAFSAA-AYDFRLTIDTTF 197
Query: 233 IIGGLALLSSITGSLLESYSKLIDSVAIFSVMYPMVLDTTGNLGSII-GAKTSTKLHLEG 291
L ++ I G LL + + ++ + + V+ P+ GS+ A TS L+
Sbjct: 198 SNFALQVVEMIAGVLLSATAPVLAATGLLPVLPPLNKLAGSVAGSMASAATTSVSLYGHY 257
Query: 292 IEKIINLDILKEITVYSL-LALPLGIVGNVIGMELTKLLLHRKAEIIPHFIL--LYPVFV 348
++ + L +ITV ++ AL +G++G V+ + + P +L L V
Sbjct: 258 LDLPSMISTLFKITVGAIPSALYIGVIGYVLASV-------GEGSVGPQIVLASLLVSIV 310
Query: 349 FSVL--WFAYFLAIVADRAKLDPDNVTVPTITTLSDVFSTLFIVGIAKIVV 397
S+L A+ L +V+ RA LDPD + +P T+L D+ + + +A I++
Sbjct: 311 LSILGSLIAWLLVVVSIRAGLDPDAIAMPLATSLVDLLGVVSLSVVAWILL 361
>gi|11431344 hypothetical protein FLJ20473 [Homo sapiens]
Length = 365
Score = 70.2 bits (169), Expect = 4e-11
Identities = 81/311 (26%), Positives = 138/311 (44%), Gaps = 40/311 (12%)
Query: 107 VLSLIPVLLLWLVGALKVRNVDVAIAVLLIV--LVSTIYASLFLGTATAITTVLPYKKGI 164
V+ L+ + L+G + VDVA LL +++ A+ LG + K G+
Sbjct: 14 VVGLLAAVAALLLGVVSREEVDVAKVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGV 73
Query: 165 DPDSVAAPIITSVADLITIPLL-VGFILLYPHKQ----------TFIALTVVSIVILGIL 213
+PD++A PI S+ DLIT+ +L + Y HK +F ALT V ++I
Sbjct: 74 NPDNIATPIAASLGDLITLSILALVSSFFYRHKDSRYLTPLVCLSFAALTPVWVLI---- 129
Query: 214 RGYSKLNREDLKFLR-ELLTIIGGLALLSSITGSLLESYSKLIDSVAIFSVMYPMVLDTT 272
+K + +K L+ II LA++ S G L+ S + ++ P++
Sbjct: 130 ---AKQSPPIVKILKFGWFPII--LAMVISSFGGLILSKTVSKQQYKGMAIFTPVICGVG 184
Query: 273 GNLGSIIGAKTSTKLHLEGIEKIINLDILK------------EITVYSLLALPLGIV-GN 319
GNL +I ++ ST LH+ ++ L + K EI S L L +V G+
Sbjct: 185 GNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPNPCSTFCTSEINSMSARVLLLLVVPGH 244
Query: 320 VIGMELTKLLLHRKAEIIPHFILLY----PVFVFSVLWFAYFLAIVADRAKLDPDNVTVP 375
+I + L+ + F++LY + V +L+ A + + LDPDN +P
Sbjct: 245 LIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLAEVMVRLTWHQALDPDNHCIP 304
Query: 376 TITTLSDVFST 386
+T L D+ +
Sbjct: 305 YLTGLGDLLGS 315
>pir||T27671 hypothetical protein ZK1053.6 - Caenorhabditis elegans
>gi|3925431|emb|CAB04979.1| (Z82084) contains similarity
to Pfam domain: PF01769 (Divalent cation transporter),
Score=211.5, E-value=4.2e-60, N=2 [Caenorhabditis
elegans]
Length = 573
Score = 69.5 bits (167), Expect = 7e-11
Identities = 86/392 (21%), Positives = 164/392 (40%), Gaps = 57/392 (14%)
Query: 43 FLGKFFTLIRTEYPIILVILPGLMGMRGNIFGAMASRFSTMLYLGEISPSLKDRNVLKNI 102
+ K TL++ E P LV++P L G+RGN+ +SR ST+ + GE + V KN
Sbjct: 170 YANKTMTLVK-EVPEFLVLMPPLQGLRGNLDMTFSSRMSTLAHKGEFNEPDIYLRVRKNA 228
Query: 103 FLSIVLSLIPVLLLWLVGALKVR------NVDVAIAVLLIVLVSTIY-------ASLFLG 149
++ LS++ +L L+ V+ N +A + L + + Y +LFL
Sbjct: 229 AVAQALSILICILTNLISYCIVQITPSLDNPTLANSTSLQSIHNDTYHYLDNKETALFLT 288
Query: 150 TATAITTVL---------------PYKKGIDPDSVAAPIITSVADLITIPLLVGF-ILLY 193
++ ++ L +K +PD++ AP+ S++D++TI ++ F LL
Sbjct: 289 GSSILSVALNCAICTTFLFTIVYCAWKNDYNPDNIVAPLGASISDMLTIGSMLFFCYLLR 348
Query: 194 PHKQTFIALTVVSIVI------LGILRGYSKLNREDLKFLRELLTIIGGLALLSSITGSL 247
P+ ++ VV +V+ L I+ + N ED + + A + S L
Sbjct: 349 PYSGFSSSVPVVIVVVAACSIPLWIMIAW---NDEDALRIAKQQCFTLAFAAMVSCGAGL 405
Query: 248 LESYSKLIDSVAIFSVMYPMVLDTTGNLGSIIGAKTSTKLHLEGIEKIINLDILKEITVY 307
L+S + + + ++ GN G+++ ++ S+ L + + I+ Y
Sbjct: 406 LQSKGAM--TYPNYPAYQTLISGLAGNRGAVLASRISSHLEVHKTSDLGWRQRASPISYY 463
Query: 308 S-----------LLALPLGIVGNVIGMELT-KLLLHRKAEIIPHFILLYPVFVF----SV 351
LL L +G+ ++ E F + Y + V ++
Sbjct: 464 RSASSESRTARLLLFTALPFQMFFVGLSTAMSFVIDEPVETDFRFFIAYALVVLIQQSTI 523
Query: 352 LWFAYFLAIVADRAKLDPDNVTVPTITTLSDV 383
L+ A + +DPDN +P +T+ +DV
Sbjct: 524 LYLAQLIVFAFWSFGIDPDNHAIPLLTSAADV 555
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.329 0.146 0.409
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127172944
Number of Sequences: 2977
Number of extensions: 5074844
Number of successful extensions: 21548
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 21495
Number of HSP's gapped (non-prelim): 20
length of query: 398
length of database: 189,106,746
effective HSP length: 55
effective length of query: 343
effective length of database: 156,189,961
effective search space: 53573156623
effective search space used: 53573156623
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.7 bits)
S2: 166 (69.1 bits)