BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0906 (acaA) DE:acyl carrier protein synthase (acaA)
(350 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75047 acyl carrier protein synthase (acaa) PAB0906 - Pyroc... 708 0.0
pir||F71113 probable acyl carrier protein synthetase - Pyrococcu... 684 0.0
pir||T45082 acyl carrier protein synthase [imported] - Pyrococcu... 672 0.0
pir||A64493 acyl carrier protein synthase - Methanococcus jannas... 430 e-119
pir||F69205 3-hydroxy-3-methylglutaryl-CoA-synthase - Methanobac... 428 e-119
pir||A72574 probable acyl carrier protein synthase APE1873 - Aer... 414 e-114
emb|CAC12575.1| (AL445067) conserved hypothetical protein [Therm... 395 e-109
gb|AAK40854.1| Acyl carrier protein synthase [Sulfolobus solfata... 352 3e-96
emb|CAB57764.1| (Y18930) acyl carrier protein synthase [Sulfolob... 352 3e-96
gi|11499991 acyl carrier protein synthase (acaA-2) [Archaeoglobu... 345 4e-94
gb|AAF20927.1|AF207529_1 (AF207529) PhlA [Pseudomonas fluorescens] 220 1e-56
gb|AAB48109.1| (U41818) PhlA [Pseudomonas fluorescens] 205 5e-52
dbj|BAB07795.1| (AB037666) 3-hydroxy-3-methylglutaryl CoA syntha... 99 5e-20
dbj|BAB07822.1| (AB037907) HMG-CoA synthase [Streptomyces griseo... 90 3e-17
sp|P24249|FABH_ECOLI 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I... 89 8e-17
gb|AAD10460.1| (U40157) orf1; unknown function; similar to cond... 88 2e-16
gi|11497654 acyl carrier protein synthase (acaA-1) [Archaeoglobu... 86 5e-16
gb|AAG02422.1|AF290086_1 (AF290086) HMG-CoA synthase [Staphyloco... 86 7e-16
gb|AAG02438.1|AF290092_1 (AF290092) HMG-CoA synthase [Enterococc... 85 1e-15
gb|AAG02453.1|AF290098_1 (AF290098) HMG-CoA synthase [Streptococ... 84 2e-15
pdb|1EBL|A Chain A, The 1.8 A Crystal Structure And Active Site ... 84 3e-15
gb|AAG02427.1|AF290088_1 (AF290088) HMG-CoA synthase [Staphyloco... 83 6e-15
gb|AAG02433.1|AF290090_1 (AF290090) HMG-CoA synthase [Staphyloco... 82 1e-14
gb|AAG02448.1|AF290096_1 (AF290096) HMG-CoA synthase [Streptococ... 82 1e-14
sp|O84242|FABH_CHLTR 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I... 81 2e-14
pir||C81972 probable 3-oxoacyl-[acyl-carrier-protein] synthase (... 79 7e-14
pir||C81029 3-oxoacyl-(acyl-carrier-protein) synthase III NMB191... 79 9e-14
sp|O67185|FABH_AQUAE 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I... 79 9e-14
gb|AAG02443.1|AF290094_1 (AF290094) HMG-CoA synthase [Enterococc... 79 9e-14
sp|Q9PKF5|FABH_CHLMU 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I... 78 2e-13
sp|O85139|FABH_SALTY 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I... 77 3e-13
sp|P30790|FABH_RHOCA 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I... 76 6e-13
sp|P43711|FABH_HAEIN 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I... 76 6e-13
sp|O34746|FABH_BACSU 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I... 73 4e-12
sp|Q9Z8P0|FABH_CHLPN 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I... 73 4e-12
gb|AAC18104.1| (AF058302) putative four carbon starter unit synt... 71 1e-11
sp|O06399|FABH_MYCTU 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I... 71 3e-11
pir||B83522 3-oxoacyl-[acyl-carrier-protein PA0999 [imported] - ... 71 3e-11
sp|P31176|FABH_PORUM 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I... 70 3e-11
dbj|BAB04483.1| (AP001509) 3-oxoacyl-[acyl-carrier-protein] synt... 69 1e-10
>pir||E75047 acyl carrier protein synthase (acaa) PAB0906 - Pyrococcus abyssi
(strain Orsay) >gi|5458787|emb|CAB50274.1| (AJ248287)
acyl carrier protein synthase (acaA) [Pyrococcus abyssi]
Length = 350
Score = 708 bits (1808), Expect = 0.0
Identities = 350/350 (100%), Positives = 350/350 (100%)
Query: 1 MGKLLKPSKEIGIVGYGAYVPMYRIRNEEIGRVWGVSNFPIEEKAVPGLDEDAVTIGIEA 60
MGKLLKPSKEIGIVGYGAYVPMYRIRNEEIGRVWGVSNFPIEEKAVPGLDEDAVTIGIEA
Sbjct: 1 MGKLLKPSKEIGIVGYGAYVPMYRIRNEEIGRVWGVSNFPIEEKAVPGLDEDAVTIGIEA 60
Query: 61 ARNALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTE 120
ARNALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTE
Sbjct: 61 ARNALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTE 120
Query: 121 ALQAAIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGS 180
ALQAAIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGS
Sbjct: 121 ALQAAIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGS 180
Query: 181 YSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQ 240
YSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQ
Sbjct: 181 YSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQ 240
Query: 241 PNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWVSFG 300
PNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWVSFG
Sbjct: 241 PNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWVSFG 300
Query: 301 SGAGSDAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRKYIL 350
SGAGSDAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRKYIL
Sbjct: 301 SGAGSDAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRKYIL 350
>pir||F71113 probable acyl carrier protein synthetase - Pyrococcus horikoshii
>gi|3257085|dbj|BAA29768.1| (AP000003) 350aa long
hypothetical acyl carrier protein synthetase [Pyrococcus
horikoshii]
Length = 350
Score = 684 bits (1746), Expect = 0.0
Identities = 328/350 (93%), Positives = 346/350 (98%)
Query: 1 MGKLLKPSKEIGIVGYGAYVPMYRIRNEEIGRVWGVSNFPIEEKAVPGLDEDAVTIGIEA 60
MGKLLKP K++GIVGYGAYVPMYRIRNEEIGRVWG+SNFPIEEKAVPGLDEDA+TIGIEA
Sbjct: 1 MGKLLKPIKDVGIVGYGAYVPMYRIRNEEIGRVWGISNFPIEEKAVPGLDEDAITIGIEA 60
Query: 61 ARNALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTE 120
ARNALKRAKIDP++IRAIWFGSESKPYAVKPS+T+IAEAIGATPDLEAADFEFACKAGTE
Sbjct: 61 ARNALKRAKIDPKDIRAIWFGSESKPYAVKPSSTVIAEAIGATPDLEAADFEFACKAGTE 120
Query: 121 ALQAAIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGS 180
ALQAAIGFVASGMAKYAMAIGADTAQGRP DHLEFTAGAGGAAFI+GEKSSET+AYFEGS
Sbjct: 121 ALQAAIGFVASGMAKYAMAIGADTAQGRPGDHLEFTAGAGGAAFIIGEKSSETVAYFEGS 180
Query: 181 YSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQ 240
YSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHV+TAAKTLMDELGLTP DFDYAVFHQ
Sbjct: 181 YSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVVTAAKTLMDELGLTPEDFDYAVFHQ 240
Query: 241 PNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWVSFG 300
PNVKFPL AA++LGIPKEKVLPGLL+G+IGNTYSGATMVGISAVLDIAKPGDRILWVSFG
Sbjct: 241 PNVKFPLVAARMLGIPKEKVLPGLLSGRIGNTYSGATMVGISAVLDIAKPGDRILWVSFG 300
Query: 301 SGAGSDAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRKYIL 350
SGAGSDAFSIVVQDAIEEKR+LAPKVEDY+KRRKVIDYALYAKARRKYI+
Sbjct: 301 SGAGSDAFSIVVQDAIEEKRNLAPKVEDYIKRRKVIDYALYAKARRKYII 350
>pir||T45082 acyl carrier protein synthase [imported] - Pyrococcus furiosus
>gi|1197357|emb|CAA59499.1| (X85250) acyl carrier
protein synthase [Pyrococcus furiosus]
Length = 350
Score = 672 bits (1715), Expect = 0.0
Identities = 324/350 (92%), Positives = 343/350 (97%)
Query: 1 MGKLLKPSKEIGIVGYGAYVPMYRIRNEEIGRVWGVSNFPIEEKAVPGLDEDAVTIGIEA 60
M K++KP K++GIVGYGAYVPMYRIRNEEIGRVWGVS+FPIEEKAVPGLDEDA+TIGIEA
Sbjct: 1 MRKVMKPMKDVGIVGYGAYVPMYRIRNEEIGRVWGVSSFPIEEKAVPGLDEDAITIGIEA 60
Query: 61 ARNALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTE 120
ARNALKRAKIDP++IRAIWFG+ESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTE
Sbjct: 61 ARNALKRAKIDPQKIRAIWFGTESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTE 120
Query: 121 ALQAAIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGS 180
ALQAAIGFV SGMA+YAMAIGADTAQGRP DHLEFTAGAGGAAFIVGEKS+E++AYFEGS
Sbjct: 121 ALQAAIGFVGSGMAEYAMAIGADTAQGRPGDHLEFTAGAGGAAFIVGEKSNESVAYFEGS 180
Query: 181 YSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQ 240
YSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHH+I AAKTLM+ELGL P+DFDYAVFHQ
Sbjct: 181 YSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHIINAAKTLMEELGLKPSDFDYAVFHQ 240
Query: 241 PNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWVSFG 300
PNVKFPLT AKILGIPKEKVLPGLLTG+IGNTYSGATMVG+SAVLDIAKPGDRILWVSFG
Sbjct: 241 PNVKFPLTVAKILGIPKEKVLPGLLTGRIGNTYSGATMVGVSAVLDIAKPGDRILWVSFG 300
Query: 301 SGAGSDAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRKYIL 350
SGAGS+AFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRKYIL
Sbjct: 301 SGAGSNAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRKYIL 350
>pir||A64493 acyl carrier protein synthase - Methanococcus jannaschii
>gi|1592177|gb|AAB99564.1| (U67595) putative
beta-ketoacyl acyl-carrier-protein synthase (fabH)
[Methanococcus jannaschii]
Length = 345
Score = 430 bits (1094), Expect = e-119
Identities = 215/342 (62%), Positives = 258/342 (74%), Gaps = 8/342 (2%)
Query: 12 GIVGYGAYVPMYRIRNEEIGRVWGVSNFPIE------EKAVPGLDEDAVTIGIEAARNAL 65
GIVGYGAY+P YRI+ EEI RVW I+ EKAVP LDED TI +EAARNAL
Sbjct: 3 GIVGYGAYIPKYRIKVEEIARVWNKDPESIKKGLLVYEKAVPSLDEDTATIAVEAARNAL 62
Query: 66 KRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAA 125
KRA+IDP++I A++ GSES PYAVKP+ATI+AEAI ATPDL AAD EFACKAGT +Q
Sbjct: 63 KRAEIDPKDIGAVYVGSESHPYAVKPTATIVAEAIDATPDLTAADLEFACKAGTAGIQMC 122
Query: 126 IGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGSYSYVT 185
+G V SG+ KY +AIGADTAQG P D LE+TA AGGAA+I+G+ S +A F G+YSY T
Sbjct: 123 MGLVESGLIKYGLAIGADTAQGAPGDALEYTAAAGGAAYIIGK--SNVIAEFNGTYSYTT 180
Query: 186 DTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQPNVKF 245
DTPDFWRR+ + YPRHG RFTGEPAYF HVI AAK LM+++G P D+DY VFHQPN KF
Sbjct: 181 DTPDFWRREGKPYPRHGGRFTGEPAYFRHVINAAKGLMEKMGTKPEDYDYCVFHQPNGKF 240
Query: 246 PLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWVSFGSGAGS 305
+ AKILG +E+ GLLT IGNTYSGA +G+S VLD + G+RIL VS+GSGAGS
Sbjct: 241 YIRVAKILGFKEEQYKIGLLTPYIGNTYSGAVPLGLSNVLDNCEGGERILAVSYGSGAGS 300
Query: 306 DAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRK 347
DAF I V D I + +D APK Y++R++ IDYA+YAK R+K
Sbjct: 301 DAFDITVTDRINKVKDKAPKTAYYLERKEYIDYAIYAKFRKK 342
>pir||F69205 3-hydroxy-3-methylglutaryl-CoA-synthase - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621881|gb|AAB85292.1| (AE000857)
3-hydroxy-3-methylglutaryl-CoA-synthase
[Methanobacterium thermoautotrophicum]
Length = 349
Score = 428 bits (1090), Expect = e-119
Identities = 212/342 (61%), Positives = 262/342 (75%), Gaps = 8/342 (2%)
Query: 12 GIVGYGAYVPMYRIRNEEIGRVWGVS------NFPIEEKAVPGLDEDAVTIGIEAARNAL 65
GIVGYG Y+P YRI+ EEI RVWG +EEK+VPG DED TI +EAARNAL
Sbjct: 6 GIVGYGVYIPSYRIKVEEIARVWGDDPQAISRGLVVEEKSVPGPDEDTATISVEAARNAL 65
Query: 66 KRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAA 125
+R++IDP EI A++ GSES PYAVKP+ATI+AEA+ ATP++ AAD EFACKAGT +QA
Sbjct: 66 RRSQIDPSEIGAVYVGSESHPYAVKPTATIVAEAVEATPEMTAADLEFACKAGTAGIQAC 125
Query: 126 IGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGSYSYVT 185
+G V SG+ KY +A+GADTAQG P D LE+TA AGGAA+++G K+ LA + +YS+ T
Sbjct: 126 MGLVDSGIIKYGLAVGADTAQGAPGDALEYTASAGGAAYVIGGKNC--LADIKETYSFTT 183
Query: 186 DTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQPNVKF 245
DTPDF+RR+ YPRHG RFTGEPAYF HV+ AA+ +M++ GL+ DFDYAVFHQPN KF
Sbjct: 184 DTPDFYRREGMPYPRHGGRFTGEPAYFKHVLGAARGMMEKTGLSADDFDYAVFHQPNGKF 243
Query: 246 PLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWVSFGSGAGS 305
L AA+ LG E+V PGLLT IGNTYSGAT VG++A LD+A+PG RIL VS+GSGAGS
Sbjct: 244 YLKAARKLGFESEQVKPGLLTPVIGNTYSGATPVGLAATLDVAEPGARILAVSYGSGAGS 303
Query: 306 DAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRK 347
DAF I V D IEE+RDLAP V + +K ++ +DYALYAK + K
Sbjct: 304 DAFIIEVNDLIEERRDLAPSVAEIIKNKRYVDYALYAKFKGK 345
>pir||A72574 probable acyl carrier protein synthase APE1873 - Aeropyrum pernix
(strain K1) >gi|5105565|dbj|BAA80878.1| (AP000062) 365aa
long hypothetical acyl carrier protein synthase
[Aeropyrum pernix]
Length = 365
Score = 414 bits (1052), Expect = e-114
Identities = 202/349 (57%), Positives = 257/349 (72%), Gaps = 6/349 (1%)
Query: 7 PSKEIGIVGYGAYVPMYRIRNEEIGRVWGVSN-----FPIEEKAVPGLDEDAVTIGIEAA 61
P GI G+GAYVP+YRI EI RVWG + + EKAV G+DED+ T+G+EAA
Sbjct: 15 PESSAGIHGWGAYVPVYRIPTREIARVWGWPDHQWKALDVYEKAVGGVDEDSTTMGVEAA 74
Query: 62 RNALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEA 121
RNA+ RA++DP I A++FGSESKPYAVKPSATIIAEA+G TP A+D EFAC+A +E
Sbjct: 75 RNAIARARVDPASIGAVFFGSESKPYAVKPSATIIAEALGITPVTMASDLEFACRAASEG 134
Query: 122 LQAAIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGSY 181
++A+IG VASG+ Y + +G+DTAQ P D LEF+A +G AAF++G S A FE S+
Sbjct: 135 MRASIGLVASGVVGYTLVVGSDTAQASPGDVLEFSASSGAAAFVIGP-SKGAAAVFESSF 193
Query: 182 SYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQP 241
+YVTDTPDFWRR + YP HG FTGEPAYFHH+ +A K L ++ GL+P DFDYA+FHQP
Sbjct: 194 TYVTDTPDFWRRGLKPYPSHGEGFTGEPAYFHHIESAVKGLFEKTGLSPGDFDYAIFHQP 253
Query: 242 NVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWVSFGS 301
N KFP+ AK LG E+V PGL+T IGNTY+ + ++G+ VLD+AKPGDRIL FGS
Sbjct: 254 NGKFPVKVAKKLGFTMEQVKPGLVTPFIGNTYNASALLGLVKVLDVAKPGDRILVAPFGS 313
Query: 302 GAGSDAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRKYIL 350
GAGSDA+S++V DAIEE + LA +E Y+KRR IDY +YAK R K ++
Sbjct: 314 GAGSDAYSLIVTDAIEEAKPLAQPLEYYLKRRIEIDYGVYAKIRGKLVV 362
>emb|CAC12575.1| (AL445067) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 351
Score = 395 bits (1004), Expect = e-109
Identities = 199/346 (57%), Positives = 249/346 (71%), Gaps = 9/346 (2%)
Query: 12 GIVGYGAYVPMYRIRNEEIGRVWGVSNFPIEE------KAVPGLDEDAVTIGIEAARNAL 65
GIV YG+Y+P YRI+ +EI RVWG + I+ K+VP DED TI +EAARNAL
Sbjct: 3 GIVTYGSYIPRYRIKPDEIARVWGENPDHIKNGIYILSKSVPAPDEDVATISVEAARNAL 62
Query: 66 KRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAA 125
KR KIDP+EI AI+ GSES PYAVKP+ATI+ AIG L AAD+EFACKAGT +Q
Sbjct: 63 KRKKIDPKEIGAIYVGSESHPYAVKPTATIVGSAIGVDFSLFAADYEFACKAGTAGMQNV 122
Query: 126 IGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGSYSYVT 185
V SGM KY +AIGADT+QG P D LE++A AGG AFI+G+ +T+A + S +
Sbjct: 123 KAMVDSGMIKYGLAIGADTSQGAPGDALEYSASAGGTAFIIGK--DDTIAEINSTLSVAS 180
Query: 186 DTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQPNVKF 245
DTPDFWRR+ + YP HG RFTGEPAYF HVITAAK +M+ + P D+DY VFHQPN KF
Sbjct: 181 DTPDFWRREGQPYPSHGERFTGEPAYFRHVITAAKMMMERMETQPKDYDYVVFHQPNGKF 240
Query: 246 PLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWVSFGSGAGS 305
P AAK+LG +++ GLLT IGNTYSG+ M G+S++LD++KPGD IL VSFGSGAGS
Sbjct: 241 PTRAAKMLGFEEKQYKDGLLTPYIGNTYSGSMMTGLSSILDVSKPGDHILAVSFGSGAGS 300
Query: 306 DAFSIVVQDAIEE-KRDLAPKVEDYVKRRKVIDYALYAKARRKYIL 350
DAF I V D IEE R+ AP ++ ++ K +DYA+YAK ++K I+
Sbjct: 301 DAFDITVTDRIEEMDRNRAPTIKKMLENVKWVDYAIYAKYKKKIIV 346
>gb|AAK40854.1| Acyl carrier protein synthase [Sulfolobus solfataricus]
Length = 350
Score = 352 bits (894), Expect = 3e-96
Identities = 177/342 (51%), Positives = 233/342 (67%), Gaps = 6/342 (1%)
Query: 12 GIVGYGAYVPMYRIRNEEIGRVWG-----VSNFPIEEKAVPGLDEDAVTIGIEAARNALK 66
GI+G+GAY+P YRI+ E+I ++WG V + + EK+VPG DED+ TI E++ NA+K
Sbjct: 4 GILGWGAYIPRYRIKVEDIAKMWGYDEAVVKSLGLTEKSVPGHDEDSTTIAWESSINAIK 63
Query: 67 RAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAI 126
RA++D +IR + FGSESK YAVKP++TI+ +A+G AD EFAC+A + L+ A
Sbjct: 64 RAQVDTSKIRLVLFGSESKVYAVKPTSTILIDALGINNYSATADMEFACRAASVGLRLAS 123
Query: 127 GFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSE-TLAYFEGSYSYVT 185
FV YA+ IGADTAQ P D LE ++ A G AF+VG+ + + A E S SY +
Sbjct: 124 SFVLHNNDSYALVIGADTAQSNPGDVLELSSAAAGVAFVVGKTDEKHSAAVIEYSSSYTS 183
Query: 186 DTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQPNVKF 245
DTPDFWRR YP HG FTGEPAYFHH+I+A L+ GL +DFDY VFHQPN KF
Sbjct: 184 DTPDFWRRDGTPYPVHGEGFTGEPAYFHHIISAVNDLLQNSGLKISDFDYFVFHQPNGKF 243
Query: 246 PLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWVSFGSGAGS 305
P+ AK LG+P EKV GL++ IGN Y+ + ++G++ VLDIAKPG+RIL FGSGAGS
Sbjct: 244 PIQVAKKLGVPLEKVKQGLVSPYIGNPYNASALLGLAKVLDIAKPGERILVAPFGSGAGS 303
Query: 306 DAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRK 347
DAFSI+V + I K+ LA VE Y+ +K++ YA YAK K
Sbjct: 304 DAFSILVSEGILAKQKLAKTVEYYINNKKLVSYAEYAKYTNK 345
>emb|CAB57764.1| (Y18930) acyl carrier protein synthase [Sulfolobus solfataricus]
Length = 350
Score = 352 bits (894), Expect = 3e-96
Identities = 177/342 (51%), Positives = 233/342 (67%), Gaps = 6/342 (1%)
Query: 12 GIVGYGAYVPMYRIRNEEIGRVWG-----VSNFPIEEKAVPGLDEDAVTIGIEAARNALK 66
GI+G+GAY+P YRI+ E+I ++WG V + + EK+VPG DED+ TI E++ NA+K
Sbjct: 4 GILGWGAYIPRYRIKVEDIAKMWGYDEAVVKSLGLTEKSVPGHDEDSTTIAWESSINAIK 63
Query: 67 RAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAI 126
RA++D +IR + FGSESK YAVKP++TI+ +A+G AD EFAC+A + L+ A
Sbjct: 64 RAQVDTSKIRLVLFGSESKVYAVKPTSTILIDALGINNYSATADMEFACRAASVGLRLAS 123
Query: 127 GFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSE-TLAYFEGSYSYVT 185
FV YA+ IGADTAQ P D LE ++ A G AF+VG+ + + A E S SY +
Sbjct: 124 SFVLHNNDSYALVIGADTAQSNPGDVLELSSAAAGVAFVVGKTDEKHSAAVIEYSSSYTS 183
Query: 186 DTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQPNVKF 245
DTPDFWRR YP HG FTGEPAYFHH+I+A L+ GL +DFDY VFHQPN KF
Sbjct: 184 DTPDFWRRDGTPYPVHGEGFTGEPAYFHHIISAVNDLLQNSGLKISDFDYFVFHQPNGKF 243
Query: 246 PLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWVSFGSGAGS 305
P+ AK LG+P EKV GL++ IGN Y+ + ++G++ VLDIAKPG+RIL FGSGAGS
Sbjct: 244 PIQVAKKLGVPLEKVKQGLVSPYIGNPYNASALLGLAKVLDIAKPGERILVAPFGSGAGS 303
Query: 306 DAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRK 347
DAFSI+V + I K+ LA VE Y+ +K++ YA YAK K
Sbjct: 304 DAFSILVSEGILAKQKLAKTVEYYINNKKLVSYAEYAKYTNK 345
>gi|11499991 acyl carrier protein synthase (acaA-2) [Archaeoglobus fulgidus]
>gi|7482895|pir||H69551 acyl carrier protein synthase
(acaA-2) homolog - Archaeoglobus fulgidus
>gi|2650679|gb|AAB91251.1| (AE001109) acyl carrier
protein synthase (acaA-2) [Archaeoglobus fulgidus]
Length = 303
Score = 345 bits (876), Expect = 4e-94
Identities = 170/294 (57%), Positives = 211/294 (70%), Gaps = 9/294 (3%)
Query: 11 IGIVGYGAYVPMYRIRNEEIGRVWGVS------NFPIEEKAVPGLDEDAVTIGIEAARNA 64
IGIV YG+YVP +RIR EEI RVWG + EK+VPG+DEDA TI +EAAR A
Sbjct: 2 IGIVSYGSYVPKFRIRVEEIARVWGEDAKKIKDGLGVHEKSVPGMDEDAATIAVEAAREA 61
Query: 65 LKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQA 124
++RA I+P EI A++ GSES PYAVKP+ATI+ EA+G D AAD EFACKAGT +Q
Sbjct: 62 IRRAGINPEEIGAVFVGSESHPYAVKPTATIVGEALGVGNDYFAADLEFACKAGTAGMQI 121
Query: 125 AIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGSYSYV 184
V +GM KY +AIGADT+Q RP D LE+ A AGGAAFI+GE +A E +YS+
Sbjct: 122 CYSMVKAGMIKYGLAIGADTSQARPGDALEYAAAAGGAAFIIGE---NPIAEVEATYSFT 178
Query: 185 TDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQPNVK 244
+DTPDFWRR + YP HG RFTG PAYF HVI+AAK LM++ G DFDYAVFH PN K
Sbjct: 179 SDTPDFWRRDLQPYPSHGGRFTGLPAYFRHVISAAKGLMEKYGYKVEDFDYAVFHMPNAK 238
Query: 245 FPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWVS 298
FP+ AAK+LG E + GL+ IGNTYSG++++G++A LD+A+P +RIL VS
Sbjct: 239 FPVRAAKMLGFSMEHISQGLVVKAIGNTYSGSSLLGLAATLDVAEPDERILLVS 292
>gb|AAF20927.1|AF207529_1 (AF207529) PhlA [Pseudomonas fluorescens]
Length = 362
Score = 220 bits (556), Expect = 1e-56
Identities = 136/353 (38%), Positives = 199/353 (55%), Gaps = 16/353 (4%)
Query: 9 KEIGIVGYGAYVPMYRIRNEEIGRVWGVS-------NFPIEEKAVPGLDEDAVTIGIEAA 61
K+IGIV YGA +P+ R++ +E+ VW + N + E+AV DED +T+G+ AA
Sbjct: 4 KKIGIVSYGAGIPVCRLKVQEVINVWKNTDLKLVEENLGVTERAVLQPDEDVITLGVLAA 63
Query: 62 RNALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEA 121
+ AL K+ +I A++ G+ + PY + SA+II E +G+ D AD +FA K+GT A
Sbjct: 64 QRALD--KVPGHQIEALYLGTCTNPYDSRASASIILEMLGSGYDAYCADVQFAGKSGTSA 121
Query: 122 LQAAIGFVASGMAKYAMAIGADTAQGR--PADHLEFTAGAGGAAFIVGEKSSETLAYFEG 179
LQ VASGM A+AIGADT P D E AGAG AA ++G S + +A F+
Sbjct: 122 LQICQALVASGMTGSALAIGADTINRNTAPGDLTESYAGAGAAALLIG--SQDVIAEFDA 179
Query: 180 SYSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYF---HHVITAAKTLMDELGLTPADFDYA 236
S+S D D R Q + Y R G + AA+ LM +L +PAD+DY
Sbjct: 180 SFSCAADVADNIRPQGDRYIRSGMGLGSDKNSIGLEDQTRRAAEGLMAKLHTSPADYDYV 239
Query: 237 VFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILW 296
VF Q V P + AK LG ++V PG+ G +G+ S + ++G+ VLD A+PG +IL
Sbjct: 240 VFQQNLVSTPYSLAKHLGFNPKQVEPGIYAGNVGDAGSASPLLGLINVLDQARPGQKILL 299
Query: 297 VSFGSGAGSDAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRKYI 349
VS+G GAGSDA ++ V DAIE+ + + + ++ + +DY K KY+
Sbjct: 300 VSYGFGAGSDAIALTVTDAIEQYQKHNKPLRELLESKIYVDYGTSIKYEFKYL 352
>gb|AAB48109.1| (U41818) PhlA [Pseudomonas fluorescens]
Length = 360
Score = 205 bits (517), Expect = 5e-52
Identities = 126/352 (35%), Positives = 193/352 (54%), Gaps = 16/352 (4%)
Query: 10 EIGIVGYGAYVPMYRIRNEEIGRVWG-------VSNFPIEEKAVPGLDEDAVTIGIEAAR 62
++GIV YGA +P+ R++ E++ VW + + E+AV DED +T+ + AA+
Sbjct: 3 KVGIVSYGAGIPVCRLKVEDVIHVWKNTDLSLVTNQLGVVERAVLQPDEDVITLSVLAAQ 62
Query: 63 NALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEAL 122
AL +A ++ A++ G+ + PY + SA +I E +G D AD +FA K+GT AL
Sbjct: 63 RALDKAP--SCDLEALYLGTCTNPYDSRASAAVILEMLGCGYDAFCADVQFAGKSGTSAL 120
Query: 123 QAAIGFVASGMAKYAMAIGADTAQGR--PADHLEFTAGAGGAAFIVGEKSSETLAYFEGS 180
Q A VASGMA A+AIGADT P D E AGAG AA ++G ++ +A+F+ S
Sbjct: 121 QIAYALVASGMAGNALAIGADTINRNTAPGDLTESYAGAGAAALLLGTEN--VIAHFDAS 178
Query: 181 YSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYF---HHVITAAKTLMDELGLTPADFDYAV 237
+S D D R Q + Y R G + AA LM ++ + +DFDY V
Sbjct: 179 FSCAADVADNIRPQGDRYIRSGMGLGSDKNSIGLEDQTHRAASGLMAKMNVQASDFDYVV 238
Query: 238 FHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWV 297
F Q V P + K LG K ++ PG+ +G+ + + ++G+ +VLD A+PG++IL V
Sbjct: 239 FQQNLVSTPFSLGKGLGFTKAQIEPGIYAQSVGDAGAASPLLGLVSVLDRARPGEKILLV 298
Query: 298 SFGSGAGSDAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAKARRKYI 349
S+G GAGSDA ++ V DAIE + + ++ + +DY K KY+
Sbjct: 299 SYGFGAGSDAIALTVTDAIEAYQKTNVALRTLLEDKYYVDYGTSIKYEFKYL 350
>dbj|BAB07795.1| (AB037666) 3-hydroxy-3-methylglutaryl CoA synthase [Streptomyces
sp. CL190]
Length = 389
Score = 99.5 bits (244), Expect = 5e-20
Identities = 90/313 (28%), Positives = 137/313 (43%), Gaps = 18/313 (5%)
Query: 42 EEKAVPGLDEDAVTIGIEAARNALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIG 101
+ +VP DED VT+ AAR ++R IR + F +ES K + +G
Sbjct: 42 QSMSVPAADEDIVTMAATAARPIIERN--GKSRIRTVVFATESSIDQAKAGGVYVHSLLG 99
Query: 102 ATPDLEAADFEFACKAGTEALQAAIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGG 161
+ + AC T ALQ AIG V A+ + I +D ++ E T GA
Sbjct: 100 LESACRVVELKQACYGATAALQFAIGLVRRDPAQQVLVIASDVSKYELDSPGEATQGAAA 159
Query: 162 AAFIVGEKSSETLAYFEGSYSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKT 221
A +VG + L E S + D DFWR + + AY V A K
Sbjct: 160 VAMLVGADPA-LLRIEEPSGLFTADVMDFWRPNYLTTALVDGQ-ESINAYLQAVEGAWKD 217
Query: 222 LMDELGLTPADFDYAVFHQPNVKFPLTAAKIL----GIPKEK-VLPGLL------TGKIG 270
++ G + +F V+HQP K A + L G +K + G L IG
Sbjct: 218 YAEQDGRSLEEFAAFVYHQPFTKMAYKAHRHLLNFNGYDTDKDAIEGALGQTTAYNNVIG 277
Query: 271 NTYSGATMVGISAVLDIAK--PGDRILWVSFGSGAGSDAFSIVVQDAIEEKRDLAPKVED 328
N+Y+ + +G++A+LD A G I ++S+GSG+ ++ FS V E+ ++
Sbjct: 278 NSYTASVYLGLAALLDQADDLTGRSIGFLSYGSGSVAEFFSGTVVAGYRERLRTEAN-QE 336
Query: 329 YVKRRKVIDYALY 341
+ RRK +DYA Y
Sbjct: 337 AIARRKSVDYATY 349
>dbj|BAB07822.1| (AB037907) HMG-CoA synthase [Streptomyces griseolosporeus]
Length = 346
Score = 90.1 bits (220), Expect = 3e-17
Identities = 87/311 (27%), Positives = 132/311 (41%), Gaps = 20/311 (6%)
Query: 45 AVPGLDEDAVTIGIEAARNALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATP 104
+VP DED VT+ AA + R D IR + +ES K + + +G
Sbjct: 2 SVPAADEDIVTLAATAAAPIVARHGSD--RIRTVVLATESSIDQAKSAGVYVHSLLGLPS 59
Query: 105 DLEAADFEFACKAGTEALQAAIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAF 164
+ + AC T LQ AIG V A+ + I +D ++ E T GA A
Sbjct: 60 ATRVVELKQACYGATAGLQFAIGLVQRDPAQQVLVIASDVSKYDLDSPGEATQGAAAVAM 119
Query: 165 IVGEKSSETLAYFEGSYSYVTDTPDFWRRQHEHYPR-HGNRFTGEPAYFHHVITAAKTLM 223
+VG + + S + D DFWR + G G AY V A K
Sbjct: 120 LVGADPG-LVRIEDPSGLFTVDVMDFWRPNYRTTALVDGQESIG--AYLQAVEGAWKDYS 176
Query: 224 DELGLTPADFDYAVFHQPNVKFPLTAAKIL------GIPKEKVLPGL-----LTGKIGNT 272
+ G + F +HQP K A + L I + V + IGN+
Sbjct: 177 ERGGHSLEQFAAFCYHQPFTKMAHKAHRHLLNYCSHDIHHDDVTRAVGRTTAYNRVIGNS 236
Query: 273 YSGATMVGISAVLDIAK--PGDRILWVSFGSGAGSDAFSIVVQDAIEEKRDLAPKVEDYV 330
Y+ + +G++A+LD A G+RI ++S+GSG+ ++ F +V ++ A +E V
Sbjct: 237 YTASVYLGLAALLDQADDLTGERIGFLSYGSGSVAEFFGGIVVAGYRDRLRTAANIE-AV 295
Query: 331 KRRKVIDYALY 341
RR+ IDYA Y
Sbjct: 296 SRRRPIDYAGY 306
>sp|P24249|FABH_ECOLI 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III (BETA-KETOACYL-ACP
SYNTHASE III) (KAS III) >gi|281818|pir||A42431
3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41)
III - Escherichia coli >gi|6730278|pdb|1D9B|A Chain A,
Crystal Structure Of Ketoacyl-Acp Synthase Iii (Fabh)
>gi|6730279|pdb|1D9B|B Chain B, Crystal Structure Of
Ketoacyl-Acp Synthase Iii (Fabh)
>gi|145898|gb|AAA23749.1| (M77744) beta-ketoacyl-acyl
carrier protein synthase III [Escherichia coli]
>gi|1787333|gb|AAC74175.1| (AE000210)
3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA
ACP transacylase [Escherichia coli K12]
Length = 317
Score = 88.9 bits (217), Expect = 8e-17
Identities = 89/312 (28%), Positives = 136/312 (43%), Gaps = 31/312 (9%)
Query: 13 IVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIEAARNALK 66
I+G G+Y+P N ++ ++ W V+ I E+ + +E T+G EAA A++
Sbjct: 5 IIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAIE 64
Query: 67 RAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAI 126
A I+ +I I + S +A PSA +++ A D AC T AL A
Sbjct: 65 MAGIEKDQIGLIVVATTSATHAF-PSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVAD 123
Query: 127 GFVASGMAKYAMAIGADTAQGR--PADH---LEFTAGAGGAAFIVGEKSS--ETLAYFEG 179
+V SG KYA+ +G+D P D + F GAG A E+ T + +G
Sbjct: 124 QYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEEPGIISTHLHADG 183
Query: 180 SYSYVTDTPDFWRRQHE---HYPRHGNRFTGEPAYFHHVITAAKTLMDEL----GLTPAD 232
SY + P+ R E H GN F +T ++DE L +
Sbjct: 184 SYGELLTLPNADRVNPENSIHLTMAGNE------VFKVAVTELAHIVDETLAANNLDRSQ 237
Query: 233 FDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGI-SAVLD-IAKP 290
D+ V HQ N++ AK LG+ + V+ L + GNT + + + AV D KP
Sbjct: 238 LDWLVPHQANLRIISATAKKLGMSMDNVVVTL--DRHGNTSAASVPCALDEAVRDGRIKP 295
Query: 291 GDRILWVSFGSG 302
G +L +FG G
Sbjct: 296 GQLVLLEAFGGG 307
>gb|AAD10460.1| (U40157) orf1; unknown function; similar to condensing-enzymes;
Method: conceptual translation supplied by author.
[Staphylococcus carnosus]
Length = 389
Score = 87.8 bits (214), Expect = 2e-16
Identities = 90/352 (25%), Positives = 146/352 (40%), Gaps = 24/352 (6%)
Query: 11 IGIVGYGAYVPMYRIRNEEIGRVWGV--SNFPI----EEKAVPGLDEDAVTIGIEAARNA 64
IGI Y+P + + E+ GV + F I + AV + +D V++G AA+
Sbjct: 3 IGIDQLNFYIPNFYVDMAELAEARGVDPNKFLIGIGQSQMAVSPVSQDIVSMGANAAQPI 62
Query: 65 LKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQA 124
L D ++I + +ES + K SA I +G P + + AC A T A+Q
Sbjct: 63 LSEQ--DKKDITMVIVATESAIDSAKASAVQIHHLLGIQPFARCFEMKEACYAATPAIQL 120
Query: 125 AIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGSYSYV 184
A ++ + + I +DTA+ E T GAG A ++ S L + S +Y
Sbjct: 121 AKDYLVPRPKEKVLVIASDTARYGLNSGGEPTQGAGAVAMVISHNPS-ILELHDDSVAYT 179
Query: 185 TDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQPNVK 244
D DFWR E YP + + + AY + + +DF FH P K
Sbjct: 180 EDVYDFWRPSGEIYPLVAGKLS-KDAYIKSFQESWNEYAKRHHKSLSDFAALCFHVPFTK 238
Query: 245 FPLTA--AKILGIPKEKVLPGLLTG---------KIGNTYSGATMVGISAVLDIAK--PG 291
A + + E L G +GN Y+G+ + + ++L+ K G
Sbjct: 239 MGQKALDSILTDSASEDTQARLNEGYKSATDYNRYVGNVYTGSLYLSLISLLENHKLNGG 298
Query: 292 DRILWVSFGSGAGSDAFSIVVQDAIEEKRDLAPKVEDYVKRRKVIDYALYAK 343
D I S+GSG+ + FS + D ++ D+ + + RK + Y K
Sbjct: 299 DNIGLFSYGSGSVGEFFSATLVDNYQDHLDVKAH-KAMLDNRKALSVEEYEK 349
>gi|11497654 acyl carrier protein synthase (acaA-1) [Archaeoglobus fulgidus]
>gi|7482894|pir||A69254 acyl carrier protein synthase
(acaA-1) homolog - Archaeoglobus fulgidus
>gi|2650618|gb|AAB91195.1| (AE001104) acyl carrier
protein synthase (acaA-1) [Archaeoglobus fulgidus]
Length = 467
Score = 86.2 bits (210), Expect = 5e-16
Identities = 85/324 (26%), Positives = 139/324 (42%), Gaps = 27/324 (8%)
Query: 19 YVPMYRIRNEEIGRVWGVSNFPIEEKAVPGLDEDAVTIGIEAARNALKRAKIDPREIRAI 78
Y+P+++++ +EI + G+ + E+AV DED++T+ +EAAR K D A+
Sbjct: 21 YLPVWKLKRDEISKETGMPSMG-GERAVAHWDEDSITMAVEAAR------KFDGA-FDAV 72
Query: 79 WFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAIGFVASGMAKYAM 138
F S S P+ +K A+ IA A+ D +A T+AL A FV SG +
Sbjct: 73 IFASSSPPFRIKQCASFIASALDLPDSTFTMDITDTMRAATDALITANEFVDSGRFSRVL 132
Query: 139 AIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGSYSYVTDTPDFWRRQHEHY 198
+ D +P E G AA +V ++ + + S P W +
Sbjct: 133 VVAGDKIPTKPGTLYEQLYGDAAAAVVVEKEGGAKILGYSTS---TKPLPGSWMLADDDT 189
Query: 199 PR-HGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQPNVKFPLTAAKILGIPK 257
R + R Y V AA L +LGL+PAD D V P+ K K +G
Sbjct: 190 VRDYDMRVDARYGYAASVQKAAMPLFAKLGLSPADIDRIVASAPDPKSYQGLLKAVGARP 249
Query: 258 EKVLPGLLTGKIGNTYSGATMVGISAVLDIAKPGDRILWVSFGSGAGSDAFSIVVQDAIE 317
E+ +G S ++ ++ L+ + G RIL +G GA D ++ ++ A++
Sbjct: 250 EE----FYFDSVGIAGSAHPLLLLATQLE--REG-RILLGGYGEGA--DVIAVEIEQAMD 300
Query: 318 EKRDLAPKVEDYVKRRKVIDYALY 341
+ ++ RK I Y Y
Sbjct: 301 S------NMGRMLESRKEISYGDY 318
>gb|AAG02422.1|AF290086_1 (AF290086) HMG-CoA synthase [Staphylococcus aureus]
Length = 388
Score = 85.8 bits (209), Expect = 7e-16
Identities = 87/331 (26%), Positives = 142/331 (42%), Gaps = 22/331 (6%)
Query: 11 IGIVGYGAYVPMYRIRNEEIGRVWGV--SNFPI----EEKAVPGLDEDAVTIGIEAARNA 64
IGI YVP Y + ++ V + F I E AV +++D V++G AA++
Sbjct: 3 IGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDI 62
Query: 65 LKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQA 124
+ D ++I + +ES A K +A I +G P + + AC A T A+Q
Sbjct: 63 ITDE--DKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQL 120
Query: 125 AIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGSYSYV 184
A ++A+ + + I DTA+ E T GAG A ++ S LA E + +Y
Sbjct: 121 AKDYLATRPNEKVLVIATDTARYGLNSGGEPTQGAGAVAMVIAHNPS-ILALNEDAVAYT 179
Query: 185 TDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQPNVK 244
D DFWR YP + + AY + G + ADF FH P K
Sbjct: 180 EDVYDFWRPTGHKYPLVDGALS-KDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTK 238
Query: 245 FPLTAAK-ILGIPKEKVLPGLLTG---------KIGNTYSGATMVGISAVLD--IAKPGD 292
A + I+ E L +G +GN Y+G+ + + ++L+ + G+
Sbjct: 239 MGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDLQAGE 298
Query: 293 RILWVSFGSGAGSDAFSIVVQDAIEEKRDLA 323
I S+GSG+ + +S + ++ D A
Sbjct: 299 TIGLFSYGSGSVVEFYSATLVVGYKDHLDQA 329
>gb|AAG02438.1|AF290092_1 (AF290092) HMG-CoA synthase [Enterococcus faecalis]
Length = 383
Score = 85.0 bits (207), Expect = 1e-15
Identities = 89/318 (27%), Positives = 132/318 (40%), Gaps = 23/318 (7%)
Query: 11 IGIVGYGAYVPMYRIRNEEIGRVWGVS--NFPI----EEKAVPGLDEDAVTIGIEAARNA 64
IGI +VP Y I + V F I ++ AV + +D VT AA
Sbjct: 3 IGIDKISFFVPPYYIDMTALAEARNVDPGKFHIGIGQDQMAVNPISQDIVTFAANAAEAI 62
Query: 65 LKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQA 124
L K D I + G+ES K +A ++ +G P + + + AC T LQ
Sbjct: 63 L--TKEDKEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKEACYGATAGLQL 120
Query: 125 AIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGSYSYV 184
A VA K + + AD A+ E T GAG A +V + LA E +
Sbjct: 121 AKNHVALHPDKKVLVVAADIAKYGLNSGGEPTQGAGAVAMLVASE-PRILALKEDNVMLT 179
Query: 185 TDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQPNVK 244
D DFWR YP + E Y GL AD+D FH P K
Sbjct: 180 QDIYDFWRPTGHPYPMVDGPLSNE-TYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTK 238
Query: 245 FPLTA--AKI---LGIPKEKVLPG-----LLTGKIGNTYSGATMVGISAVLDIA---KPG 291
A AKI +E++L + + ++GN Y+G+ +G+ ++L+ A G
Sbjct: 239 MGKKALLAKISDQTEAEQERILARYEESIIYSRRVGNLYTGSLYLGLISLLENATTLTAG 298
Query: 292 DRILWVSFGSGAGSDAFS 309
++I S+GSGA ++ F+
Sbjct: 299 NQIGLFSYGSGAVAEFFT 316
>gb|AAG02453.1|AF290098_1 (AF290098) HMG-CoA synthase [Streptococcus pneumoniae]
Length = 398
Score = 84.3 bits (205), Expect = 2e-15
Identities = 80/319 (25%), Positives = 134/319 (41%), Gaps = 24/319 (7%)
Query: 11 IGIVGYGAYVPMYRIRNEEIGRVWGVS------NFPIEEKAVPGLDEDAVTIGIEAARNA 64
IGI G Y ++ +++ G+ ++E ++ L ED VT+ A+ +
Sbjct: 11 IGIDKIGFATSQYVLKLQDLAEARGIDPEKLSKGLLLKELSIAPLTEDIVTLAASASDSI 70
Query: 65 LKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQA 124
L + +E+ + +ES K +A + +G P + + + AC T AL
Sbjct: 71 LTEQ--ERQEVDMVIVATESGIDQSKAAAVFVHGLLGIQPFARSFEIKEACYGATAALHY 128
Query: 125 AIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGSYSYV 184
A V + + I +D A+ E T GAG A ++ + + +A+ + +
Sbjct: 129 AKLHVENSPESKVLVIASDIAKYGIETPGEPTQGAGSVAMLITQ-NPRMMAFNNDNVAQT 187
Query: 185 TDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQPNVK 244
D DFWR + P + N Y + T LT DF FH P K
Sbjct: 188 RDIMDFWRPNYSTTP-YVNGVYSTQQYLDSLKTTWLEYQKRYQLTLDDFAAVCFHLPYPK 246
Query: 245 FPLTAAKIL---GIPKEKV--------LPGLLTGKIGNTYSGATMVGISAVL---DIAKP 290
L K + +P+EK L + K+GN Y+G+ +G+ ++L D K
Sbjct: 247 LALKGLKKIMDKNLPQEKKDLLQKHFDQSILYSQKVGNIYTGSLFLGLLSLLENTDSLKA 306
Query: 291 GDRILWVSFGSGAGSDAFS 309
GD+I S+GSGA ++ FS
Sbjct: 307 GDKIALYSYGSGAVAEFFS 325
>pdb|1EBL|A Chain A, The 1.8 A Crystal Structure And Active Site Architecture
Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Iii
(Fabh) From Escherichia Coli >gi|7245809|pdb|1EBL|B
Chain B, The 1.8 A Crystal Structure And Active Site
Architecture Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase Iii (Fabh) From Escherichia Coli
Length = 317
Score = 83.9 bits (204), Expect = 3e-15
Identities = 88/312 (28%), Positives = 131/312 (41%), Gaps = 31/312 (9%)
Query: 13 IVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIEAARNALK 66
I+G G+Y+P N ++ + W V+ I E+ + +E T G EAA A++
Sbjct: 5 IIGTGSYLPEQVRTNADLEKXVDTSDEWIVTRTGIRERHIAAPNETVSTXGFEAATRAIE 64
Query: 67 RAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAI 126
A I+ +I I + S +A +A I +G A D AC T AL A
Sbjct: 65 XAGIEKDQIGLIVVATTSATHAFPSAACQIQSXLGIK-GCPAFDVAAACAGFTYALSVAD 123
Query: 127 GFVASGMAKYAMAIGADTAQGR--PADH---LEFTAGAGGAAFIVGEKSS--ETLAYFEG 179
+V SG KYA+ +G+D P D + F GAG A E+ T + +G
Sbjct: 124 QYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEEPGIISTHLHADG 183
Query: 180 SYSYVTDTPDFWRRQHE---HYPRHGNRFTGEPAYFHHVITAAKTLMDEL----GLTPAD 232
SY + P+ R E H GN F +T ++DE +
Sbjct: 184 SYGELLTLPNADRVNPENSIHLTXAGNE------VFKVAVTELAHIVDETLAANNNDRSQ 237
Query: 233 FDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGI-SAVLD-IAKP 290
D+ V HQ N++ AK LG + V+ L + GNT + + + AV D KP
Sbjct: 238 LDWLVPHQANLRIISATAKKLGXSXDNVVVTL--DRHGNTSAASVPCALDEAVRDGRIKP 295
Query: 291 GDRILWVSFGSG 302
G +L +FG G
Sbjct: 296 GQLVLLEAFGGG 307
>gb|AAG02427.1|AF290088_1 (AF290088) HMG-CoA synthase [Staphylococcus haemolyticus]
Length = 388
Score = 82.7 bits (201), Expect = 6e-15
Identities = 83/330 (25%), Positives = 137/330 (41%), Gaps = 22/330 (6%)
Query: 11 IGIVGYGAYVPMYRIRNEEIGRVWGV--SNFPI----EEKAVPGLDEDAVTIGIEAARNA 64
IGI YVP Y + ++ V + F I + AV + +D V++G AA++
Sbjct: 3 IGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTQMAVSPVSQDIVSMGANAAKDI 62
Query: 65 LKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQA 124
+ D + I + +ES K +A I +G P + + AC A T A+Q
Sbjct: 63 I--TDDDKKHIGMVIVATESAIDNAKAAAVQIHNLLGVQPFARCFEMKEACYAATPAIQL 120
Query: 125 AIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGSYSYV 184
A ++ + + I +DTA+ E T GAG A ++ S L + + +Y
Sbjct: 121 AKDYIEKRPNEKVLVIASDTARYGIQSGGEPTQGAGAVAMLISNNPS-ILELNDDAVAYT 179
Query: 185 TDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQPNVK 244
D DFWR YP + + AY + T +DF+ FH P K
Sbjct: 180 EDVYDFWRPTGHKYPLVAGALS-KDAYIKSFQESWNEYARREDKTLSDFESLCFHVPFTK 238
Query: 245 FPLTAA-KILGIPKEKVLPGLLTG---------KIGNTYSGATMVGISAVLD--IAKPGD 292
A I+ E L +G +GN Y+G+ + + ++L+ K G
Sbjct: 239 MGKKALDSIINDADETTQERLTSGYEDAVYYNRYVGNIYTGSLYLSLISLLENRSLKGGQ 298
Query: 293 RILWVSFGSGAGSDAFSIVVQDAIEEKRDL 322
I S+GSG+ + FS + + E++ D+
Sbjct: 299 TIGLFSYGSGSVGEFFSATLVEGYEKQLDI 328
>gb|AAG02433.1|AF290090_1 (AF290090) HMG-CoA synthase [Staphylococcus epidermidis]
Length = 388
Score = 81.9 bits (199), Expect = 1e-14
Identities = 83/330 (25%), Positives = 135/330 (40%), Gaps = 22/330 (6%)
Query: 11 IGIVGYGAYVPMYRIRNEEIGRVWGV--SNFPI----EEKAVPGLDEDAVTIGIEAARNA 64
IGI YVP Y + ++ V + F I E V +++D V++G AA++
Sbjct: 3 IGIDKISFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMTVSPVNQDIVSMGANAAKDI 62
Query: 65 LKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQA 124
+ D + I + +ES K +A I +G P + + AC A T A+Q
Sbjct: 63 ITEE--DKKNIGMVIVATESAIDNAKAAAVQIHHLLGIQPFARCFEMKEACYAATPAIQL 120
Query: 125 AIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGGAAFIVGEKSSETLAYFEGSYSYV 184
A ++A + + I +DTA+ E T GAG A ++ S L + + +Y
Sbjct: 121 AKDYLAQRPNEKVLVIASDTARYGIHSGGEPTQGAGAVAMMISHDPS-ILKLNDDAVAYT 179
Query: 185 TDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYAVFHQPNVK 244
D DFWR YP + + AY + T ADF FH P K
Sbjct: 180 EDVYDFWRPTGHQYPLVAGALS-KDAYIKSFQESWNEYARRHNKTLADFASLCFHVPFTK 238
Query: 245 FPLTAAKILGIPKEKVLPGLLTGK----------IGNTYSGATMVGISAVLDI--AKPGD 292
A + ++ L +GN Y+G+ + + ++L+ K G
Sbjct: 239 MGQKALDSIINHADETTQDRLNSSYQDAVDYNRYVGNIYTGSLYLSLISLLETRDLKGGQ 298
Query: 293 RILWVSFGSGAGSDAFSIVVQDAIEEKRDL 322
I S+GSG+ + FS + D +E+ D+
Sbjct: 299 TIGLFSYGSGSVGEFFSGTLVDGFKEQLDV 328
>gb|AAG02448.1|AF290096_1 (AF290096) HMG-CoA synthase [Streptococcus pyogenes]
Length = 391
Score = 81.9 bits (199), Expect = 1e-14
Identities = 81/289 (28%), Positives = 127/289 (43%), Gaps = 30/289 (10%)
Query: 41 IEEKAVPGLDEDAVTIGIEAARNALK---RAKIDPREIRAIWFGSESKPYAVKPSATIIA 97
IE +V + ED +T+ AA L RAKID + +ES K SA +
Sbjct: 39 IESFSVAPITEDIITLAASAADQILTDEDRAKID-----MVILATESSTDQSKASAIYVH 93
Query: 98 EAIGATPDLEAADFEFACKAGTEALQAAIGFVASGMAKYAMAIGADTAQGRPADHLEFTA 157
+G P + + + AC + T AL A VAS + I +D A+ E T
Sbjct: 94 HLVGIQPFARSFEVKQACYSATAALDYAKLHVASKPDSRVLVIASDIARYGVGSPGESTQ 153
Query: 158 GAGGAAFIVGEKSSETLAYFEGSYSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVIT 217
G+G A +V LA E + + D DFWR + P + + Y + + T
Sbjct: 154 GSGSIALLV-TADPRILALNEDNVAQTRDIMDFWRPNYSFTP-YVDGIYSTKQYLNCLET 211
Query: 218 AAKTLMDELGLTPADFDYAVFHQPNVKFPLTAAKILG------IP---KEKVLPGL---- 264
+ L +DF FH P FP A K L +P +EK++
Sbjct: 212 TWQAYQKRENLQLSDFAAVCFHIP---FPKLALKGLNNIMDNTVPPEHREKLIEAFQASI 268
Query: 265 -LTGKIGNTYSGATMVGISAVLD---IAKPGDRILWVSFGSGAGSDAFS 309
+ +IGN Y+G+ +G+ ++L+ + + GD+I + S+GSGA S+ +S
Sbjct: 269 TYSKQIGNIYTGSLYLGLLSLLENSKVLQSGDKIGFFSYGSGAVSEFYS 317
>sp|O84242|FABH_CHLTR 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III (BETA-KETOACYL-ACP
SYNTHASE III) (KAS III) >gi|7433773|pir||H71538 probable
oxoacyl carrier protein synthase III - Chlamydia
trachomatis (serotype D, strain UW3/Cx)
>gi|3328649|gb|AAC67832.1| (AE001297) Oxoacyl Carrier
Protein Synthase III [Chlamydia trachomatis]
Length = 327
Score = 81.1 bits (197), Expect = 2e-14
Identities = 83/320 (25%), Positives = 134/320 (40%), Gaps = 38/320 (11%)
Query: 13 IVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIEAARNALK 66
I G G+Y+P + N ++ ++ W + I+E+ + +E + +G +AA A++
Sbjct: 5 IWGTGSYLPKKILTNADLEKIVETSDEWISTRTGIKERRIASAEEFSSFMGAKAAEKAIE 64
Query: 67 RAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAI 126
AKI ++ I F + + Y + PS+ +A+A ++ A D AC L A
Sbjct: 65 AAKISKSQVDCIVFSTAAPDY-IFPSSAALAQAYLGIKEIPAFDCLAACTGFLYGLSIAK 123
Query: 127 GFVASGMAKYAMAIGADTAQGRPADHLEFTA---GAGGAAFIVGEKSSETLAYFEGSYSY 183
+V SGM + + I AD T G GG+A IVG L + +
Sbjct: 124 AYVESGMYQCVLVIAADKLSSFVNYQDRNTCVLFGDGGSACIVGHSRPGALEISKVNLGA 183
Query: 184 VTDTPDFWR---------------RQHEHYPRHGNRFTGEPAYFHHVIT---AAKTLMDE 225
D R + H+H+ G+ + H V AAKT + E
Sbjct: 184 DGKQGDLLRLPAGGSRCPASQDTVQNHQHF----ITMEGKEVFKHAVRRMEFAAKTCITE 239
Query: 226 LGLTPADFDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVL 285
GL D D+ V HQ N + AK + +V L K GNT + + + + +L
Sbjct: 240 AGLQEKDIDWLVPHQANERIIDAIAKRFAVKDSRVFKTL--AKYGNTAASSVGIALDELL 297
Query: 286 ---DIAKPGDRILWVSFGSG 302
DI +R+L V+FG G
Sbjct: 298 RTHDI-HVAERLLLVAFGGG 316
>pir||C81972 probable 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41)
III NMA0538 [imported] - Neisseria meningitidis (group
A strain Z2491) >gi|7379278|emb|CAB83832.1| (AL162753)
putative 3-oxoacyl-[acyl-carrier-protein] synthase III
[Neisseria meningitidis Z2491]
Length = 320
Score = 79.2 bits (192), Expect = 7e-14
Identities = 79/312 (25%), Positives = 133/312 (42%), Gaps = 29/312 (9%)
Query: 13 IVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIEAARNALK 66
I G G+Y+P R+ N+++ + W + I+ + + +E + EAAR AL
Sbjct: 6 ISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRHIAAENEKTSDLAAEAARRALD 65
Query: 67 RAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAI 126
A ++ EI I + + +ATI+ + +G T A D + C AL A
Sbjct: 66 AAGLNGNEIDLIIVATATPDMQFPSTATIVQQKLGITNGCPAFDVQAVCAGFMYALTTAN 125
Query: 127 GFVASGMAKYAMAIGADTAQGRPADHLEFTA----GAGGAAFIVGEKSSETLAY----FE 178
++ SGMAK A+ IGA+T R D + T G G A ++ + + + +
Sbjct: 126 AYIKSGMAKNALVIGAETF-SRIVDWNDRTTCVLFGDGAGAVVLSASDTPGIIHSKLKAD 184
Query: 179 GSYSYVTDTPDFWRRQHEHYPRHGNRFTG--EPAYFHHVI----TAAKTLMDELGLTPAD 232
G+Y + + P Q G+ + P F + A +++E G T A
Sbjct: 185 GNYLKLLNVPG----QIACGKVSGSPYISMDGPGVFKFAVKMLSKIADDVIEEAGYTAAQ 240
Query: 233 FDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIA--KP 290
D+ V HQ N + + AK LG+ +KV+ L GNT + + + + + K
Sbjct: 241 IDWIVPHQANRRIIESTAKHLGLSMDKVV--LTVQDHGNTSAASIPLALDTGIRSGQIKR 298
Query: 291 GDRILWVSFGSG 302
G +L G G
Sbjct: 299 GQNLLLEGIGGG 310
>pir||C81029 3-oxoacyl-(acyl-carrier-protein) synthase III NMB1916 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7227173|gb|AAF42246.1| (AE002540)
3-oxoacyl-(acyl-carrier-protein) synthase III [Neisseria
meningitidis MC58]
Length = 320
Score = 78.8 bits (191), Expect = 9e-14
Identities = 79/312 (25%), Positives = 132/312 (41%), Gaps = 29/312 (9%)
Query: 13 IVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIEAARNALK 66
I G G+Y+P R+ N+++ + W + I+ + + +E + EAA AL
Sbjct: 6 ISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRHIAAENEKTSDLAAEAAHRALD 65
Query: 67 RAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAI 126
A +D EI I + + +ATI+ + +G T A D + C AL A
Sbjct: 66 AAGLDSGEIDLIIVATATPDMQFPSTATIVQQKLGITNGCPAFDVQAVCAGFMYALTTAN 125
Query: 127 GFVASGMAKYAMAIGADTAQGRPADHLEFTA----GAGGAAFIVGEKSSETLAY----FE 178
++ SGMAK A+ IGA+T R D + T G G A ++ + + + +
Sbjct: 126 AYIKSGMAKNALVIGAETF-SRIVDWNDRTTCVLFGDGAGAVVLSASDTPGIIHSKLKAD 184
Query: 179 GSYSYVTDTPDFWRRQHEHYPRHGNRFTG--EPAYFHHVI----TAAKTLMDELGLTPAD 232
G+Y + + P Q G+ + P F + A +++E G T A
Sbjct: 185 GNYLKLLNVPG----QIACGKVSGSPYISMDGPGVFKFAVKMLSKIADDVIEEAGYTAAQ 240
Query: 233 FDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIA--KP 290
D+ V HQ N + + AK LG+ +KV+ L GNT + + + + + K
Sbjct: 241 IDWIVPHQANRRIIESTAKHLGLSMDKVV--LTVQDHGNTSAASIPLALDTGIRSGQIKR 298
Query: 291 GDRILWVSFGSG 302
G +L G G
Sbjct: 299 GQNLLLEGIGGG 310
>sp|O67185|FABH_AQUAE 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III (BETA-KETOACYL-ACP
SYNTHASE III) (KAS III) >gi|7433768|pir||F70394
3-oxoacyl-[acyl-carrier-protein] synthase III - Aquifex
aeolicus >gi|2983572|gb|AAC07144.1| (AE000723)
3-oxoacyl-[acyl-carrier-protein] synthase III [Aquifex
aeolicus]
Length = 309
Score = 78.8 bits (191), Expect = 9e-14
Identities = 78/308 (25%), Positives = 128/308 (41%), Gaps = 31/308 (10%)
Query: 13 IVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIEAARNALK 66
I+G G Y+P + N ++ ++ W + I+E+ + +E + +AA+ AL+
Sbjct: 5 IIGTGVYLPKNVLTNFDLEKIVDTSDEWITTRTGIKERRI-AKEETITYMATQAAKEALR 63
Query: 67 RAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAI 126
A + P E+ I + + P PS + +A + A D AC AL A
Sbjct: 64 EANLSPEELDLIILATLT-PQKRFPSTACLVQAQLKAKGVYAFDISAACSGFIYALDIAD 122
Query: 127 GFVASGMAKYAMAIGADTAQGR-----PADHLEFTAGAGGAAFIVGEKSSETLA---YFE 178
F+ SG AK + IGA+ + + F GAG E S+ LA Y E
Sbjct: 123 SFIKSGKAKNVLVIGAEKLSEAVDWEDRSTCVLFGDGAGAVVVTRSEDKSDILATRMYAE 182
Query: 179 GSYSYV--TDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYA 236
GS + D + R + + R E + ++++ G+ P +
Sbjct: 183 GSLEELLHADNCGYIRMKGRELFKVAVRSMEE---------VCREVLEKAGVKPEEVSLV 233
Query: 237 VFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVL--DIAKPGDRI 294
+ HQ NV+ A+ L IPKEKV + K GNT + + + + + K GD I
Sbjct: 234 IPHQANVRIINALAEKLNIPKEKVFVNI--QKYGNTSAASIPIALHEAIKEGKVKRGDLI 291
Query: 295 LWVSFGSG 302
L + G G
Sbjct: 292 LMTAMGGG 299
>gb|AAG02443.1|AF290094_1 (AF290094) HMG-CoA synthase [Enterococcus faecium]
Length = 384
Score = 78.8 bits (191), Expect = 9e-14
Identities = 78/292 (26%), Positives = 127/292 (42%), Gaps = 21/292 (7%)
Query: 42 EEKAVPGLDEDAVTIGIEAARNALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIG 101
++ AV +ED +T+G AA + D I + G+ES K SA II +
Sbjct: 40 DQMAVNRANEDIITLGANAASKIVTEK--DRELIDMVIVGTESGIDHSKASAVIIHHLLK 97
Query: 102 ATPDLEAADFEFACKAGTEALQAAIGFVASGMAKYAMAIGADTAQGRPADHLEFTAGAGG 161
+ + + AC GT AL A +V + + + I +D A+ A E T G G
Sbjct: 98 IQSFARSFEVKEACYGGTAALHMAKEYVKNHPERKVLVIASDIARYGLASGGEVTQGVGA 157
Query: 162 AAFIVGEKSSETLAYFEGSYSYVTDTPDFWRRQHEHYPRHGNRFTGEP--AYFHHVITAA 219
A ++ ++ L+ + S D DFWR + +P + F V
Sbjct: 158 VAMMI-TQNPRILSIEDDSVFLTEDIYDFWRPDYSEFPVVDGPLSNSTYIESFQKVWNRH 216
Query: 220 KTLMDELGLTPADFDYAVFHQPNVKFPLTAAK-ILGIPKEKVLPGLL---------TGKI 269
K L G D+ FH P K A + +L E L+ + +I
Sbjct: 217 KELS---GRGLEDYQAIAFHIPYTKMGKKALQSVLDQTDEDNQERLMARYEESIRYSRRI 273
Query: 270 GNTYSGATMVGISAVLDIAK---PGDRILWVSFGSGAGSDAFSIVVQDAIEE 318
GN Y+G+ +G++++L+ +K PGDRI S+GSGA S+ F+ +++ +E
Sbjct: 274 GNLYTGSLYLGLTSLLENSKSLQPGDRIGLFSYGSGAVSEFFTGYLEENYQE 325
>sp|Q9PKF5|FABH_CHLMU 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III (BETA-KETOACYL-ACP
SYNTHASE III) (KAS III) >gi|11257695|pir||G81695
3-oxoacyl-(acyl-carrier-protein) synthase III TC0510
[imported] - Chlamydia muridarum (strain Nigg)
>gi|7190549|gb|AAF39352.1| (AE002319)
3-oxoacyl-(acyl-carrier-protein) synthase III [Chlamydia
muridarum]
Length = 327
Score = 77.6 bits (188), Expect = 2e-13
Identities = 81/316 (25%), Positives = 133/316 (41%), Gaps = 30/316 (9%)
Query: 13 IVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIEAARNALK 66
I G G+Y+P + N ++ ++ W + I+E+ + +E + +G +AA A++
Sbjct: 5 IWGTGSYLPKKVLTNADLEKMVETSDEWISTRTGIKERRIASAEEFSSFMGAKAAEKAIE 64
Query: 67 RAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAI 126
AKI +I I F + + Y + PS+ +A+A ++ A D AC L A
Sbjct: 65 AAKISKSQIDCIVFATAAPDY-IFPSSAALAQAYLGIKEVPAFDCLVACTGFLYGLSIAK 123
Query: 127 GFVASGMAKYAMAIGADTAQGRPADHLEFTA---GAGGAAFIVGEKSSETLAYFEGSYSY 183
+V +GM + + I AD T G GG+A +VG +L + +
Sbjct: 124 AYVEAGMYQCVLVIAADKLSSFVNYEDRNTCVLFGDGGSACVVGPSRPGSLKISKVNLGA 183
Query: 184 VTDTPDFWR-----------RQHEHYPRHGNRFTGEPAYFHHVIT---AAKTLMDELGLT 229
D R + +H G+ + H V AAKT + E GL
Sbjct: 184 DGKQGDLLRLPAGGSRCPASQDTIQNQQHFITMEGKEVFKHAVRRMEFAAKTCITEAGLQ 243
Query: 230 PADFDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVL---D 286
D D+ V HQ N + AK + +V L K GNT + + + + +L D
Sbjct: 244 EEDIDWLVPHQANERIIDAIAKRFAVEDSRVFKTL--AKYGNTAASSVGIALDELLRTHD 301
Query: 287 IAKPGDRILWVSFGSG 302
I +R+L V+FG G
Sbjct: 302 IHSK-ERLLLVAFGGG 316
>sp|O85139|FABH_SALTY 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III (BETA-KETOACYL-ACP
SYNTHASE III) (KAS III) >gi|3282802|gb|AAC38648.1|
(AF044668) 3-oxoacyl-acyl carrier protein synthase III
[Salmonella typhimurium]
Length = 317
Score = 77.3 bits (187), Expect = 3e-13
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 31/312 (9%)
Query: 13 IVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIEAARNALK 66
I+G G+Y+P N ++ ++ W V+ I ++ + +E T+G AA A++
Sbjct: 5 IIGTGSYLPEQVRTNADLEKMVETSDEWIVTRTGIRKRHIAAPNETVATMGFTAANRAIE 64
Query: 67 RAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAI 126
A ID +I I + S +A PSA +++ A D AC T AL A
Sbjct: 65 MAGIDKDQIGLIVVATTSATHAF-PSAACQIQSMLGIKGCPAFDVAAACAGFTYALSIAD 123
Query: 127 GFVASGMAKYAMAIGADTAQGR--PADH---LEFTAGAGGAAFIVGEKSS--ETLAYFEG 179
+V SG K+A+ +G+D P D + F GAG A E+ T + +G
Sbjct: 124 QYVKSGAVKHALVVGSDVLARTCDPGDRGTIIIFGDGAGAAVLSASEEPGIISTHLHADG 183
Query: 180 SYSYVTDTPDFWRRQHE---HYPRHGNRFTGEPAYFHHVITAAKTLMDEL----GLTPAD 232
Y + P+ R + + GN F +T ++DE L ++
Sbjct: 184 RYGELLTLPNADRVNPDNPIYLTMAGNE------VFKVAVTELAHIVDETLAANNLDRSE 237
Query: 233 FDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGI-SAVLD-IAKP 290
D+ V HQ N++ AK LG+ + V+ L + GNT + + + AV D K
Sbjct: 238 LDWLVPHQANLRIISATAKKLGMSMDNVVVTL--DRHGNTSAASVPCALDEAVRDGRIKA 295
Query: 291 GDRILWVSFGSG 302
G +L +FG G
Sbjct: 296 GQLVLLEAFGGG 307
>sp|P30790|FABH_RHOCA 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III (BETA-KETOACYL-ACP
SYNTHASE III) (KAS III) >gi|97470|pir||C41608
hypothetical protein 3 (himA 5' region) - Rhodobacter
capsulatus >gi|151943|gb|AAA26127.1| (M84030) ORF3;
putative [Rhodobacter capsulatus]
Length = 324
Score = 76.1 bits (184), Expect = 6e-13
Identities = 86/323 (26%), Positives = 128/323 (39%), Gaps = 52/323 (16%)
Query: 15 GYGAYVPMYRIRNEEI-GRV-----WGVSNFPIEEKAVPGLDEDAVTIGIEAARNALKRA 68
G G Y+P + N E G++ W S IE + E + I+AA AL A
Sbjct: 9 GVGHYLPARVVENAEFEGKLDTTDEWIRSRTGIERRHFAAEGETTSQLAIKAAAAALADA 68
Query: 69 KIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAIGF 128
+ +I AI + + + AT++ +G T + A D + C AL A G
Sbjct: 69 GLSAADIDAIVVATSTPDFTFPSVATMVQAGLGNT-NAFAFDVQAVCAGFVFALANANGM 127
Query: 129 VASGMAKYAMAIGADT----------------AQGRPADHLEFTAGAGGAA---FIVGEK 169
+ SG AK + IGA+T G A LE GAG AA + +
Sbjct: 128 ILSGQAKRVLVIGAETFSRIMDWADRGTCVLFGDGAGAVILEAAEGAGTAADRGILASDL 187
Query: 170 SSE----TLAYFEGSYSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVIT----AAKT 221
S+ L Y +G S Q H GN A F H + A
Sbjct: 188 HSDGRYRELLYVDGGVST--------NGQSGHLRMQGN------AVFKHAVQKLAETAHA 233
Query: 222 LMDELGLTPADFDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGI 281
+ + GLTP D + V HQ N++ A+ +G+P E+V+ + GNT + + + +
Sbjct: 234 ALAKAGLTPEDVSWIVPHQANLRIITATAERMGVPMERVV--VTVADHGNTSAASIPLAL 291
Query: 282 SA--VLDIAKPGDRILWVSFGSG 302
S K GD I+ + G G
Sbjct: 292 STARARGQIKAGDLIVTEAIGGG 314
>sp|P43711|FABH_HAEIN 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III (BETA-KETOACYL-ACP
SYNTHASE III) (KAS III) >gi|1073900|pir||F64051
3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41)
III - Haemophilus influenzae (strain Rd KW20)
>gi|1573114|gb|AAC21826.1| (U32701) beta-ketoacyl-ACP
synthase III (fabH) [Haemophilus influenzae Rd]
Length = 316
Score = 76.1 bits (184), Expect = 6e-13
Identities = 80/312 (25%), Positives = 133/312 (41%), Gaps = 32/312 (10%)
Query: 13 IVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIEAARNALK 66
I+ G+Y+P + N ++ ++ W V+ I E+ + DE T+G EAA+NA++
Sbjct: 5 ILSTGSYLPSHIRTNADLEKMVDTSDEWIVTRSGIRERRIAAEDETVATMGFEAAKNAIE 64
Query: 67 RAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAI 126
A+I+P++I I + S +A PSA + + D + D AC AL A
Sbjct: 65 AAQINPQDIELIIVATTSHSHAY-PSAACQVQGLLNIDDAISFDLAAACTGFVYALSVAD 123
Query: 127 GFVASGMAKYAMAIGADTAQGRPADHLE------FTAGAGGAAFIVGEK----SSETLAY 176
F+ +G K A+ IG+D R D + F GAG E+ S+ A
Sbjct: 124 QFIRAGKVKKALVIGSD-LNSRKLDETDRSTVVLFGDGAGAVILEASEQEGIISTHLHAS 182
Query: 177 FEGSYSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFDYA 236
+ + + V P+ + + GN T + A +TL+ L D D+
Sbjct: 183 ADKNNALVLAQPERGIEKSGYIEMQGNE-TFKLAVRELSNVVEETLLAN-NLDKKDLDWL 240
Query: 237 VFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIA------KP 290
V HQ N++ AK L + +V+ L + Y+ + + LD A +
Sbjct: 241 VPHQANLRIITATAKKLEMDMSQVVVTL------DKYANNSAATVPVALDEAIRDGRIQR 294
Query: 291 GDRILWVSFGSG 302
G +L +FG G
Sbjct: 295 GQLLLLEAFGGG 306
>sp|O34746|FABH_BACSU 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III (BETA-KETOACYL-ACP
SYNTHASE III) (KAS III) >gi|7433769|pir||F69842
3-oxoacyl- acyl-carrier protein synthase homolog yjaX -
Bacillus subtilis >gi|2633470|emb|CAB12974.1| (Z99109)
similar to 3-oxoacyl- acyl-carrier protein synthase
[Bacillus subtilis] >gi|2633487|emb|CAB12990.1| (Z99110)
similar to 3-oxoacyl- acyl-carrier protein synthase
[Bacillus subtilis]
Length = 312
Score = 73.4 bits (177), Expect = 4e-12
Identities = 74/318 (23%), Positives = 135/318 (42%), Gaps = 32/318 (10%)
Query: 12 GIVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIEAARNAL 65
GI+G G Y+P + N ++ ++ W + IEE+ + D + + + AA+NAL
Sbjct: 4 GILGVGRYIPEKVLTNHDLEKMVETSDEWIRTRTGIEERRIAADDVFSSHMAVAAAKNAL 63
Query: 66 KRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAA 125
++A++ ++ I + + + + +I E +GA A D AC +
Sbjct: 64 EQAEVAAEDLDMILVATVTPDQSFPTVSCMIQEQLGAKKAC-AMDISAACAGFMYGVVTG 122
Query: 126 IGFVASGMAKYAMAIGADTAQGRPADHLEFTA---GAGGAAFIVGEKSSET-LAYFE--- 178
F+ SG K+ + +G + TA G G A +VG S + + FE
Sbjct: 123 KQFIESGTYKHVLVVGVEKLSSITDWEDRNTAVLFGDGAGAAVVGPVSDDRGILSFELGA 182
Query: 179 ----GSYSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDELGLTPADFD 234
G + Y+ + E + + R GE + ++++ GL+ D D
Sbjct: 183 DGTGGQHLYLNEKRHTIMNGREVF-KFAVRQMGE---------SCVNVIEKAGLSKEDVD 232
Query: 235 YAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIA--KPGD 292
+ + HQ N++ A + L +P EK+ K GNT + + + + L+ K GD
Sbjct: 233 FLIPHQANIRIMEAARERLELPVEKM--SKTVHKYGNTSAASIPISLVEELEAGKIKDGD 290
Query: 293 RILWVSFGSGAGSDAFSI 310
++ V FG G A +I
Sbjct: 291 VVVMVGFGGGLTWGAIAI 308
>sp|Q9Z8P0|FABH_CHLPN 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III (BETA-KETOACYL-ACP
SYNTHASE III) (KAS III) >gi|7433772|pir||F72096
3-oxoacyl-(acyl-carrier-protein) synthase III CP0460
[imported] - Chlamydophila pneumoniae (strains CWL029
and AR39) >gi|4376573|gb|AAD18447.1| (AE001614) Oxoacyl
Carrier Protein Synthase III [Chlamydophila pneumoniae
CWL029] >gi|7189382|gb|AAF38297.1| (AE002207)
3-oxoacyl-(acyl-carrier-protein) synthase III
[Chlamydophila pneumoniae AR39]
>gi|8978672|dbj|BAA98508.1| (AP002546) oxoacyl carrier
protein synthase III [Chlamydophila pneumoniae J138]
Length = 335
Score = 73.4 bits (177), Expect = 4e-12
Identities = 79/324 (24%), Positives = 137/324 (41%), Gaps = 36/324 (11%)
Query: 8 SKEIGIVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIEAA 61
+K+ I G+Y+P + N ++ ++ W V+ I+E+ + G E +G AA
Sbjct: 8 NKKAAIWATGSYLPEKVLSNADLEKMVDTSDEWIVTRTGIKERRIAGPQEYTSLMGAIAA 67
Query: 62 RNALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEA 121
A+ A + +I I F + + Y + PS+ +A+A D+ D + AC
Sbjct: 68 EKAIANAGLSKDQIDCIIFSTAAPDY-IFPSSGALAQAHLGIEDVPTFDCQAACTGYLYG 126
Query: 122 LQAAIGFVASGMAKYAMAIGADTAQGRPADHLEFT-------AGAGGAAFIVGEKSSETL 174
L A +V SG + + I AD + + +++T G GGAA ++GE +L
Sbjct: 127 LSVAKAYVESGTYNHVLLIAAD----KLSSFVDYTDRNTCVLFGDGGAACVIGESRPGSL 182
Query: 175 AY------FEGSYSYVTDTPDFWRR-----QHEHYPRHGNRFTGEPAYFHHV---ITAAK 220
+G + P R + +H G+ + H V TAAK
Sbjct: 183 EINRLSLGADGKLGELLSLPAGGSRCPASKETLQSGKHFIAMEGKEVFKHAVRRMETAAK 242
Query: 221 TLMDELGLTPADFDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVG 280
+ G+ D D+ V HQ N + AK I + +V + K GNT + + +
Sbjct: 243 HSIALAGIQEEDIDWFVPHQANERIIDALAKRFEIDESRVFKSV--HKYGNTAASSVGIA 300
Query: 281 ISAVL--DIAKPGDRILWVSFGSG 302
+ ++ + K D +L V+FG G
Sbjct: 301 LDELVHTESIKLDDYLLLVAFGGG 324
>gb|AAC18104.1| (AF058302) putative four carbon starter unit synthase [Streptomyces
roseofulvus]
Length = 336
Score = 71.4 bits (172), Expect = 1e-11
Identities = 84/323 (26%), Positives = 126/323 (39%), Gaps = 34/323 (10%)
Query: 6 KPSKEIGIVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIE 59
+P ++G G Y P + N E+ W + I + DE +G
Sbjct: 11 RPVVHSRLLGVGGYRPRRSVDNAELCATVASTPEWIETRSGIRARGFAAPDETLRFMGRA 70
Query: 60 AARNALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGT 119
AA AL RA + P I + S S+ P A ++AE +GA D AC
Sbjct: 71 AAEKALARAGVLPDGIDLVLVASMSRLEQTPPLAVLLAEDLGARA-AAGLDVSGACAGFC 129
Query: 120 EALQAAIGFVASGMAKYAMAIGADTAQGRPADHLE---------FTAGAGGAAFIVGEKS 170
AL A V +G A++ + +G + R D +E F GAG A +VG +
Sbjct: 130 HALALASDAVRAGSARHVLVVGTE----RMTDLVERADRTVSVLFADGAGAA--VVGPSA 183
Query: 171 ----SETLAYFEGSYSYVTDTPDFWRR--QHEHYPRHGNRFTGEPAY---FHHVITAAKT 221
S G Y+ W R R G + V A
Sbjct: 184 RPGISPPARGAAGRYAGALRMDRGWDTFAADPSLGRPWMRMDGRRVFRWAMDEVTPRAAE 243
Query: 222 LMDELGLTPADFDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGI 281
L+ E G+ P D V HQ N++ A+ LG+P+ + + + GNT + + + +
Sbjct: 244 LLRESGIEPEALDAFVPHQANLRMIELMAERLGLPERTAVARDVV-RAGNTSAASVPLAL 302
Query: 282 SAVLDIAK--PGDRILWVSFGSG 302
A+LD + GDR L V FG+G
Sbjct: 303 EALLDSGEVGSGDRALLVGFGAG 325
>sp|O06399|FABH_MYCTU 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III (BETA-KETOACYL-ACP
SYNTHASE III) (KAS III) >gi|7433774|pir||H70545 probable
fabH protein - Mycobacterium tuberculosis (strain H37RV)
>gi|2113995|emb|CAB08984.1| (Z95558) fabH [Mycobacterium
tuberculosis]
Length = 335
Score = 70.6 bits (170), Expect = 3e-11
Identities = 80/318 (25%), Positives = 130/318 (40%), Gaps = 28/318 (8%)
Query: 8 SKEIGIVGYGAYVPMYRIRNEEIGR------VWGVSNFPIEEKAVPGLDEDAVTIGIEAA 61
++ +G++ GAY P + N+EI + W + I+ + DE A ++ EA
Sbjct: 10 ARSVGLLSVGAYRPERVVTNDEICQHIDSSDEWIYTRTGIKTRRFAADDESAASMATEAC 69
Query: 62 RNALKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEA 121
R AL A + +I + + + P+A ++A ++GA L D C A
Sbjct: 70 RRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGIL-GFDLSAGCAGFGYA 128
Query: 122 LQAAIGFVASGMAKYAMAIGADTAQGRPADHLE-----FTAGAGGAAFIVGEKSSE---- 172
L AA + G A + +G T + P + F G AA +VGE +
Sbjct: 129 LGAAADMIRGGGAATMLVVG--TEKLSPTIDMYDRGNCFIFADGAAAVVVGETPFQGIGP 186
Query: 173 TLAYFEGSYSYVTDTPDFW--RRQHEHYPRHGNRFTGEPAYFHHVI----TAAKTLMDEL 226
T+A +G + W Q+ PR R G PA F + MD
Sbjct: 187 TVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEG-PAVFRWAAFKMGDVGRRAMDAA 245
Query: 227 GLTPADFDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVL- 285
G+ P D V HQ N + K L + + V+ + GNT + + + ++ +L
Sbjct: 246 GVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIE-HTGNTSAASIPLAMAELLT 304
Query: 286 -DIAKPGDRILWVSFGSG 302
AKPGD L + +G+G
Sbjct: 305 TGAAKPGDLALLIGYGAG 322
>pir||B83522 3-oxoacyl-[acyl-carrier-protein PA0999 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946908|gb|AAG04388.1|AE004532_12 (AE004532)
3-oxoacyl-[acyl-carrier-protein [Pseudomonas aeruginosa]
Length = 337
Score = 70.6 bits (170), Expect = 3e-11
Identities = 79/321 (24%), Positives = 135/321 (41%), Gaps = 36/321 (11%)
Query: 13 IVGYGAYVPMYRIRNEE-IGRVWGVSNFPIEEKAVPGL----DEDAVT-IGIEAARNALK 66
+ G G +P ++ N + +GR+ F +E V E AV+ + + AAR A++
Sbjct: 6 LAGLGFSLPKRQVSNHDLVGRINTSDEFIVERTGVRTRYHVEPEQAVSALMVPAARQAIE 65
Query: 67 RAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAI 126
A + P +I + + S + A +I +G + D C LQ A
Sbjct: 66 AAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR-HIPVLDIRAQCSGLLYGLQMAR 124
Query: 127 GFVASGMAKYAMAIGADTAQGRP-----ADHLEFTAGAGGAAFIV--GEKSSETLAYF-- 177
G + +G+A++ + + + R +L G G A +V GE + L
Sbjct: 125 GQILAGLARHVLVVCGEVLSKRMDCSDRGRNLSILLGDGAGAVVVSAGESLEDGLLDLRL 184
Query: 178 --EGSYSYVTDT-------PDFWRRQHEHYPRHGNR---FTGEPAYFHHVITAAKTLMDE 225
+G+Y + T P F E+ R G G P + H T + +
Sbjct: 185 GADGNYFDLLMTAAPGSASPTFL---DENVLREGGGEFLMRGRPMFEHASQTLVRIAGEM 241
Query: 226 LG---LTPADFDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGIS 282
L LT D D+ + HQPN++ + LGIP+ K + ++GN S +T V ++
Sbjct: 242 LAAHELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKF--AVTVDRLGNMASASTPVTLA 299
Query: 283 AVLDIAKPGDRILWVSFGSGA 303
+PG R+L +++GSGA
Sbjct: 300 MFWPDIQPGQRVLVLTYGSGA 320
>sp|P31176|FABH_PORUM 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III (BETA-KETOACYL-ACP
SYNTHASE III) (KAS III) >gi|419714|pir||S30933
3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41)
III - red alga (Porphyra umbilicalis) chloroplast
>gi|22744|emb|CAA78410.1| (Z14034) beta-ketoacyl-acyl
carrier protein synthase III [Porphyra purpurea]
Length = 326
Score = 70.2 bits (169), Expect = 3e-11
Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 31/318 (9%)
Query: 11 IGIVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIEAARNA 64
+ I+ G+ VP + + N++ + W + I++ +P L + EAA +A
Sbjct: 3 VHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKSILPLLLPSLTKLAAEAANDA 62
Query: 65 LKRAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQA 124
L +A I+ +I I + S P + SA+ + IGAT A D AC AL
Sbjct: 63 LSKASINAEDIDLIILAT-STPDDLFGSASQLQAEIGATSST-AFDITAACSGFIIALVT 120
Query: 125 AIGFVASGMAKYAMAIGADTAQGRPADHLEFTA----GAGGAAFIVGEKSSETLAYFE-- 178
A F+ +G + +GADT R D + ++ G G A ++GE S ++ F+
Sbjct: 121 ASQFIQAGSYNKVLVVGADT-MSRWIDWSDRSSCILFGDGAGAVLIGESSINSILGFKLC 179
Query: 179 -----GSYSYVTDTPDFWRRQHEHYPRHGN----RFTGEPAY---FHHVITAAKTLMDEL 226
S+ + ++P ++ G R G+ Y V K ++++
Sbjct: 180 TDGRLNSHLQLMNSPSDSQQFGLTTVPKGRYDSIRMNGKEVYKFAVFQVPIVIKNCLNDV 239
Query: 227 GLTPADFDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLD 286
++ + D+ + HQ N++ A L IP K++ L GNT + + + + +
Sbjct: 240 NISIDEVDWFILHQANIRILEAIATRLSIPLSKMITNL--ENYGNTSAASIPLALDEAIK 297
Query: 287 IAK--PGDRILWVSFGSG 302
K PG ++ FG+G
Sbjct: 298 EKKIQPGQVVVLAGFGAG 315
>dbj|BAB04483.1| (AP001509) 3-oxoacyl-[acyl-carrier-protein] synthase [Bacillus
halodurans]
Length = 332
Score = 68.7 bits (165), Expect = 1e-10
Identities = 77/318 (24%), Positives = 131/318 (40%), Gaps = 38/318 (11%)
Query: 13 IVGYGAYVPMYRIRNEEIGRV------WGVSNFPIEEKAVPGLDEDAVTIGIEAARNALK 66
I G+YVP R+ N+++ ++ W V I E+ + DE IG +A ++ +
Sbjct: 8 ITAIGSYVPERRLTNDDLEKMVDTNDEWIVKRTGIRERRIAADDEFTSDIGYKAVQDLIA 67
Query: 67 RAKIDPREIRAIWFGSESKPYAVKPSATIIAEAIGATPDLEAADFEFACKAGTEALQAAI 126
R + ++ I + + + +A++I +G + A D AC T L A
Sbjct: 68 RYEKSVDDVDMIIVCTFTPDFKTPSAASLIQAKLGIQ-NTGAIDLNAACAGFTYGLHMAN 126
Query: 127 GFVASGMAKYAMAIGADTAQGRPADHLE------FTAGAGGAAFIVGEKSSETLAYFEGS 180
G ++SG+ + + IGA+T + D+ + F GAG E +++ GS
Sbjct: 127 GLISSGLHRKILVIGAETI-SKVTDYTDRTTCILFGDGAGAVLVEYDENEPSFVSFNLGS 185
Query: 181 YS------YVTDTPDFWRRQHEHYPRHGNRF-TGEPAY---FHHVITAAKTLMDELGLTP 230
Y T + + E GN +G Y + V K ++++ +
Sbjct: 186 EGERANKLYCTGLAE--QMNGEELVNTGNLVQSGREVYKWAVNTVPAGMKAVLEKAAMKR 243
Query: 231 ADFDYAVFHQPNVKFPLTAAKILGIPKEKVLPGLLTGKIGNTYSGATMVGISAVLDIA-- 288
+ D+ V H N++ + GIP E+ L L+ + GNT S I LDI
Sbjct: 244 NEIDWFVPHSANLRMIESICDKSGIPLEQTLYSLV--QYGNTSSAT----IPLALDIGVR 297
Query: 289 ----KPGDRILWVSFGSG 302
K GD +L FG G
Sbjct: 298 EGKLKHGDNVLLYGFGGG 315
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.137 0.403
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135173847
Number of Sequences: 2977
Number of extensions: 5924124
Number of successful extensions: 13963
Number of sequences better than 1.0e-10: 40
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 13870
Number of HSP's gapped (non-prelim): 51
length of query: 350
length of database: 189,106,746
effective HSP length: 55
effective length of query: 295
effective length of database: 156,189,961
effective search space: 46076038495
effective search space used: 46076038495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 165 (68.7 bits)