BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0911 (PAB0911) DE:Hypothetical protein
(172 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75048 hypothetical protein PAB0911 - Pyrococcus abyssi (st... 342 1e-93
pir||H71112 hypothetical protein PH0671 - Pyrococcus horikoshii ... 274 4e-73
gb|AAK40706.1| Conserved hypothetical protein [Sulfolobus solfat... 113 2e-24
pir||D75371 conserved hypothetical protein - Deinococcus radiodu... 106 1e-22
emb|CAC12554.1| (AL445067) conserved hypothetical protein [Therm... 106 2e-22
gb|AAC45649.1| (AF006034) unknown [Clostridium pasteurianum] 103 1e-21
pir||D70046 conserved hypothetical protein yvqK - Bacillus subti... 102 3e-21
pir||G83096 conserved hypothetical protein PA4399 [imported] - P... 100 1e-20
gb|AAA74262.1| (U30903) unknown [Klebsiella pneumoniae] 98 6e-20
gb|AAK40901.1| Conserved hypothetical protein [Sulfolobus solfat... 98 8e-20
sp|P45515|YDHW_CITFR HYPOTHETICAL 19.8 KDA PROTEIN IN DHAR-DHAT ... 98 8e-20
emb|CAB57712.1| (Y18930) hypothetical protein [Sulfolobus solfat... 98 8e-20
dbj|BAB05314.1| (AP001512) unknown conserved protein [Bacillus h... 95 4e-19
pir||C72772 probable 1,3-propanediol dehydrogenase APE0166 - Aer... 87 9e-17
gb|AAA21165.1| (U13875) C26E6.11 gene product [Caenorhabditis el... 81 9e-15
emb|CAB94552.1| (AL359152) conserved hypothetical protein [Strep... 79 3e-14
gb|AAD39014.1| (AF026270) PduO [Salmonella enterica serovar Typh... 78 8e-14
gi|11498888 conserved hypothetical protein [Archaeoglobus fulgid... 74 9e-13
sp|Q10622|YD14_MYCTU HYPOTHETICAL 20.7 KDA PROTEIN RV1314C >gi|7... 73 3e-12
sp|P53523|YD14_MYCLE HYPOTHETICAL 20.9 KDA PROTEIN U471A >gi|747... 71 6e-12
gb|AAG19830.1| (AE005068) Vng1547c [Halobacterium sp. NRC-1] 69 2e-11
>pir||C75048 hypothetical protein PAB0911 - Pyrococcus abyssi (strain Orsay)
>gi|5458793|emb|CAB50280.1| (AJ248287) hypothetical
protein [Pyrococcus abyssi]
Length = 172
Score = 342 bits (868), Expect = 1e-93
Identities = 172/172 (100%), Positives = 172/172 (100%)
Query: 1 MRVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLNDEMREIIDRIQ 60
MRVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLNDEMREIIDRIQ
Sbjct: 1 MRVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLNDEMREIIDRIQ 60
Query: 61 MDIYKIMGELGSKGDIKGITDEDLKWIEGIIEKYEGEVELRSFVLPGGTIESAKLDVCRT 120
MDIYKIMGELGSKGDIKGITDEDLKWIEGIIEKYEGEVELRSFVLPGGTIESAKLDVCRT
Sbjct: 61 MDIYKIMGELGSKGDIKGITDEDLKWIEGIIEKYEGEVELRSFVLPGGTIESAKLDVCRT 120
Query: 121 IARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMARKIEIEKGKLREVRA 172
IARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMARKIEIEKGKLREVRA
Sbjct: 121 IARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMARKIEIEKGKLREVRA 172
>pir||H71112 hypothetical protein PH0671 - Pyrococcus horikoshii
>gi|3257079|dbj|BAA29762.1| (AP000003) 172aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 172
Score = 274 bits (694), Expect = 4e-73
Identities = 128/172 (74%), Positives = 159/172 (92%)
Query: 1 MRVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLNDEMREIIDRIQ 60
MR+TTKVGDKGST+LFGG+EVWKDSPIIEANGTLDELTSF+GEA+HY+++EM+ I++ IQ
Sbjct: 1 MRITTKVGDKGSTRLFGGEEVWKDSPIIEANGTLDELTSFIGEAKHYVDEEMKGILEEIQ 60
Query: 61 MDIYKIMGELGSKGDIKGITDEDLKWIEGIIEKYEGEVELRSFVLPGGTIESAKLDVCRT 120
DIYKIMGE+GSKG I+GI++E +KW+EG+I +YE V L+SFVLPGGT+ESAKLDVCRT
Sbjct: 61 NDIYKIMGEIGSKGKIEGISEERIKWLEGLISRYEEMVNLKSFVLPGGTLESAKLDVCRT 120
Query: 121 IARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMARKIEIEKGKLREVRA 172
IARRAER+VAT++RE+G +++LVYLNRLSDLLFL+AR IEIEK KL+EVR+
Sbjct: 121 IARRAERKVATVLREFGIGKEALVYLNRLSDLLFLLARVIEIEKNKLKEVRS 172
>gb|AAK40706.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 172
Score = 113 bits (279), Expect = 2e-24
Identities = 69/167 (41%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 5 TKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLNDEMREIIDRIQMDIY 64
T GDKG TKL E+WKD I+ A G LDEL + LG L ++REI+ RIQ DI+
Sbjct: 6 TGTGDKGKTKLPSVGEIWKDDDIVNAIGDLDELNASLGVISS-LYPQLREIMVRIQSDIF 64
Query: 65 KIMGELGSKGDIKGITDEDLKWIEGIIEKY-EGEVELRSFVLPGGTIESAKLDVCRTIAR 123
+ E+ G +E +KWIE I + +G ELR+F+LPGG + ++ L + RTI R
Sbjct: 65 SLSSEIA--GFDMNFEEEKVKWIEEEISSFSKGIPELRNFILPGGHVAASFLHLARTICR 122
Query: 124 RAERRVATIVREYGFARKSLVYLNRLSDLLFLMARKIEIEKGKLREV 170
R+ER V I++ + YLNRLS LLF++A + ++ K++E+
Sbjct: 123 RSERSVVKILKRSKAKDVHVKYLNRLSSLLFVLALYVN-KQEKVQEI 168
>pir||D75371 conserved hypothetical protein - Deinococcus radiodurans (strain
R1) >gi|6459405|gb|AAF11197.1|AE002007_3 (AE002007)
conserved hypothetical protein [Deinococcus radiodurans]
Length = 185
Score = 106 bits (263), Expect = 1e-22
Identities = 65/177 (36%), Positives = 100/177 (55%), Gaps = 8/177 (4%)
Query: 1 MRVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLNDEMREI-IDRI 59
M++ T+ GD+G T L+G D V K P +EA GT+DEL S LG AR + D + ++ +
Sbjct: 1 MKLYTRTGDQGQTGLYGADRVSKAHPRVEAYGTVDELNSALGLARAHSTDAALDTDLEYL 60
Query: 60 QMDIYKIMGELGSKG------DIKGITDEDLKWIEGIIEKY-EGEVELRSFVLPGGTIES 112
Q ++ + +L ++ ++ I ED+ ++E +I++Y E FV PGGT +
Sbjct: 61 QNALFDVGADLATRSGTPYEKNLVRIDAEDVAFLEAMIDRYQEAAPPFTGFVHPGGTPAA 120
Query: 113 AKLDVCRTIARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMARKIEIEKGKLRE 169
A L + R +ARRAER V ++ + VYLNR+SDLLF+MAR + G E
Sbjct: 121 AALQLARAVARRAERDVIRLLDVEEANAQVQVYLNRVSDLLFIMARAVNARSGLSEE 177
>emb|CAC12554.1| (AL445067) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 177
Score = 106 bits (262), Expect = 2e-22
Identities = 57/155 (36%), Positives = 95/155 (60%), Gaps = 2/155 (1%)
Query: 5 TKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLN-DEMREIIDRIQMDI 63
T+ GD+G T L V KDSP++E GT+DEL SF+G A D++R + RIQ D+
Sbjct: 3 TRRGDQGETDLANRARVGKDSPVVEVQGTIDELNSFIGYALVLSRWDDIRNDLFRIQNDL 62
Query: 64 YKIMGELGSKGDIKGITDEDLKWIEGIIEKYEGEV-ELRSFVLPGGTIESAKLDVCRTIA 122
+ + ++ + G + +T E + ++E +++ + E+ ++ FV+PGG+IESA L + R ++
Sbjct: 63 FVLGEDVSTGGKGRTVTREMIDYLEARVKEMKAEIGKIELFVVPGGSIESASLHMARAVS 122
Query: 123 RRAERRVATIVREYGFARKSLVYLNRLSDLLFLMA 157
RR ERR+ + + L+Y NRLS +LF+ A
Sbjct: 123 RRLERRIVAASKLTEINKNVLIYANRLSSILFMHA 157
>gb|AAC45649.1| (AF006034) unknown [Clostridium pasteurianum]
Length = 173
Score = 103 bits (254), Expect = 1e-21
Identities = 68/175 (38%), Positives = 100/175 (56%), Gaps = 12/175 (6%)
Query: 1 MRVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLND-EMREIIDRI 59
M + T+ GDKG T LFGG + KD +E G LDE SF+G A + +++ I+ I
Sbjct: 1 MSIYTRSGDKGETGLFGGSRINKDDLRVECYGCLDEANSFIGLAYSLIKSKDIKIILRNI 60
Query: 60 QMDIYKIMGELGSKGDIKG-------ITDEDLKWIEGIIEKYEGEV-ELRSFVLPGGTIE 111
Q I+ EL S D KG I+ D++ +E II++Y V +SFV+PG TI
Sbjct: 61 QNKIFIAGAELAS--DEKGKAYLKDTISQGDIEELEKIIDRYTEIVGPQKSFVIPGDTIS 118
Query: 112 SAKLDVCRTIARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMARKIEIEKGK 166
SA L V RT+ RR+ER + + + ++ Y+NRLSD+LF++AR +E E +
Sbjct: 119 SASLHVSRTVVRRSERLMVALKSKLKVRKELYKYINRLSDVLFILAR-VEAETNR 172
>pir||D70046 conserved hypothetical protein yvqK - Bacillus subtilis
>gi|2635812|emb|CAB15305.1| (Z99120) similar to
hypothetical proteins [Bacillus subtilis]
>gi|2635828|emb|CAB15320.1| (Z99121) similar to
hypothetical proteins [Bacillus subtilis]
>gi|2832814|emb|CAA11738.1| (AJ223978) YvqK protein
[Bacillus subtilis]
Length = 193
Score = 102 bits (251), Expect = 3e-21
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 9/173 (5%)
Query: 1 MRVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLN-----DEMREI 55
M++ TK GDKG T L GG KDS +E+ GT+DEL SF+G A L+ +++
Sbjct: 1 MKLYTKTGDKGQTGLVGG-RTDKDSLRVESYGTIDELNSFIGLALAELSGQPGFEDLTAE 59
Query: 56 IDRIQMDIYKIMGELGSKGDIKG--ITDEDLKWIEGIIEKYEGEV-ELRSFVLPGGTIES 112
+ IQ +++ G+L + K +T+E + ++E I+ Y E EL+ F+LPGG+ +
Sbjct: 60 LLTIQHELFDCGGDLAIVTERKDYKLTEESVSFLETRIDAYTAEAPELKKFILPGGSKCA 119
Query: 113 AKLDVCRTIARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMARKIEIEKG 165
+ L + RTI RRAERRV +++ L YLNRLSD F AR + G
Sbjct: 120 SLLHIARTITRRAERRVVALMKSEEIHETVLRYLNRLSDYFFAGARVVNARSG 172
>pir||G83096 conserved hypothetical protein PA4399 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9950630|gb|AAG07787.1|AE004855_9 (AE004855)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 192
Score = 100 bits (246), Expect = 1e-20
Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 11/174 (6%)
Query: 2 RVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLG-------EAR--HYLNDEM 52
++ T+ GD+G T L GG V K P IEA G +DEL S LG EAR H +E+
Sbjct: 7 KIYTRTGDRGETGLAGGRRVPKSHPRIEAIGAVDELNSQLGLLLAELLEARGAHPGLEEI 66
Query: 53 REIIDRIQMDIYKIMGELGSKGDIKGITDEDLKWIEGIIEKYEGEV-ELRSFVLPGGTIE 111
+ + +Q ++ + GEL + + + + ++ +E I+++ E+ L++F+LPGG+
Sbjct: 67 VQALAPVQHRLFDLGGELAMP-EYRALDETEVARLESCIDRWNDELGPLKNFILPGGSRP 125
Query: 112 SAKLDVCRTIARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMARKIEIEKG 165
A+ VCR++AR AERR + +E L YLNRLSDLLF+ AR I +G
Sbjct: 126 VAQAHVCRSLARSAERRCQALDQEETLEGVGLRYLNRLSDLLFVAARAIARRQG 179
>gb|AAA74262.1| (U30903) unknown [Klebsiella pneumoniae]
Length = 176
Score = 97.9 bits (240), Expect = 6e-20
Identities = 64/166 (38%), Positives = 93/166 (55%), Gaps = 11/166 (6%)
Query: 2 RVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLNDE-MREIIDRIQ 60
R+ T+ GDKG+T L+GG + KD +EA GT+DEL S LG D +RE + IQ
Sbjct: 3 RIYTRTGDKGTTALYGGSRIEKDHIRVEAYGTVDELISQLGVCYATTRDAGLRESLHHIQ 62
Query: 61 MDIYKIMGELGSKGDIKGIT-------DEDLKWIEGIIEKYEGEV-ELRSFVLPGGTIES 112
++ + EL S D +G+T +E++ +E +I++ E L+ FV+PG + S
Sbjct: 63 QTLFVLGAELAS--DARGLTRLSQTIGEEEITALERLIDRNMAESGPLKQFVIPGRNLAS 120
Query: 113 AKLDVCRTIARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMAR 158
A+L V RT +RR ER + + R + Y NRLSD LF MAR
Sbjct: 121 AQLHVARTQSRRLERLLTAMDRAHPLRDALKRYSNRLSDALFSMAR 166
>gb|AAK40901.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 174
Score = 97.5 bits (239), Expect = 8e-20
Identities = 61/157 (38%), Positives = 94/157 (59%), Gaps = 9/157 (5%)
Query: 5 TKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLN-DEMREIIDRIQMDI 63
T+ GD G+T + V KDSP++ G +DEL SF+G A + ++M+ + R+Q ++
Sbjct: 3 TRTGDDGNTNVIS-KRVGKDSPVVNLLGDIDELNSFIGLALTKIEWEDMQSDLMRVQTEL 61
Query: 64 YKIMGE--LGSKGDIKGITDEDLKWIEGIIEKYEGEV-ELRSFVLPGGTIESAKLDVCRT 120
+ I+GE + KG I +E +KW+E +Y E ++ FV+PGG+ +++ L V R+
Sbjct: 62 F-ILGEEIIQDKGRIN---EETIKWLESRTVEYRKESGPVKLFVIPGGSEQASYLHVVRS 117
Query: 121 IARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMA 157
IARR ER +E F + +VYLNRLS LLF MA
Sbjct: 118 IARRVERNAVAYSKELNFNKWIIVYLNRLSSLLFSMA 154
>sp|P45515|YDHW_CITFR HYPOTHETICAL 19.8 KDA PROTEIN IN DHAR-DHAT INTERGENIC REGION (ORFW)
>gi|493088|gb|AAB48846.1| (U09771) orfW [Citrobacter
freundii]
Length = 176
Score = 97.5 bits (239), Expect = 8e-20
Identities = 63/166 (37%), Positives = 95/166 (56%), Gaps = 11/166 (6%)
Query: 2 RVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLND-EMREIIDRIQ 60
R+ T+ GD G+T LFGG + KD +EA GT+DEL S LG E+R+ + +Q
Sbjct: 3 RIYTRTGDNGTTALFGGSRIDKDDIRVEAYGTVDELISQLGVCYASTRQAELRQELHAMQ 62
Query: 61 MDIYKIMGELGSKGDIKGIT-------DEDLKWIEGIIEKYEGEV-ELRSFVLPGGTIES 112
++ + EL S D KG+T +ED++ +E +I++ + L+ FV+PG + S
Sbjct: 63 KMLFVLGAELAS--DQKGLTRLKQRIGEEDIQALEQLIDRNMAQSGPLKEFVIPGKNLAS 120
Query: 113 AKLDVCRTIARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMAR 158
A+L V RT+ RR ER + + R ++ Y+NRLSD LF MAR
Sbjct: 121 AQLHVARTLTRRLERILIAMGRTLTLRDEARRYINRLSDALFSMAR 166
>emb|CAB57712.1| (Y18930) hypothetical protein [Sulfolobus solfataricus]
Length = 174
Score = 97.5 bits (239), Expect = 8e-20
Identities = 61/157 (38%), Positives = 94/157 (59%), Gaps = 9/157 (5%)
Query: 5 TKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLN-DEMREIIDRIQMDI 63
T+ GD G+T + V KDSP++ G +DEL SF+G A + ++M+ + R+Q ++
Sbjct: 3 TRTGDDGNTNVIS-KRVGKDSPVVNLLGDIDELNSFIGLALTKIEWEDMQSDLMRVQTEL 61
Query: 64 YKIMGE--LGSKGDIKGITDEDLKWIEGIIEKYEGEV-ELRSFVLPGGTIESAKLDVCRT 120
+ I+GE + KG I +E +KW+E +Y E ++ FV+PGG+ +++ L V R+
Sbjct: 62 F-ILGEEIIQDKGRIN---EETIKWLESRTVEYRKESGPVKLFVIPGGSEQASYLHVVRS 117
Query: 121 IARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMA 157
IARR ER +E F + +VYLNRLS LLF MA
Sbjct: 118 IARRVERNAVAYSKELNFNKWIIVYLNRLSSLLFSMA 154
>dbj|BAB05314.1| (AP001512) unknown conserved protein [Bacillus halodurans]
Length = 196
Score = 95.2 bits (233), Expect = 4e-19
Identities = 66/172 (38%), Positives = 94/172 (54%), Gaps = 16/172 (9%)
Query: 1 MRVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLND----EMREII 56
MR+ T+ GDKG T + GG + KD + A GT DEL SF+G A L++ ++R +
Sbjct: 1 MRLYTRTGDKGKTSVIGG-RLAKDDTRVVAYGTTDELNSFVGLAITQLDENTFADIRGEL 59
Query: 57 DRIQMDIYKIMGELGSKGDIKGITDEDLKWIEGIIEKYEGEV--------ELRSFVLPGG 108
+IQ +++ G+L +K D K + I++ E + EL F+LPGG
Sbjct: 60 FKIQHELFDCGGDLAM---LKVKEDRPYKAKQEIVDFLEQRIDAYIKEAPELERFILPGG 116
Query: 109 TIESAKLDVCRTIARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMARKI 160
+ +A L VCRTIARRAER V + +E L YLNRLSD F +AR +
Sbjct: 117 SEAAASLHVCRTIARRAERYVVRLQQEGEINPIVLKYLNRLSDYFFAVARVV 168
>pir||C72772 probable 1,3-propanediol dehydrogenase APE0166 - Aeropyrum pernix
(strain K1) >gi|5103556|dbj|BAA79077.1| (AP000058) 188aa
long hypothetical 1,3-propanediol dehydrogenase
[Aeropyrum pernix]
Length = 188
Score = 87.4 bits (213), Expect = 9e-17
Identities = 67/177 (37%), Positives = 92/177 (51%), Gaps = 13/177 (7%)
Query: 5 TKVGDKGSTKLFGGDE------VWKDSPIIEANGTLDELTSFLGEARHYLNDEMRE-IID 57
T+ GD G T F E V KD P+IE GTLDE S +G AR +L+ E E ID
Sbjct: 14 TRTGDSGETWCFALGEGRKPVRVPKDHPLIEFLGTLDEANSLIGLARSFLSGEGLEGSID 73
Query: 58 RIQMDIYKIMGELGS--KGDIKGITDEDLKWIEGIIEKYEGEVELRSFVLPGGTIESAKL 115
+ +++ +G + +EDLK +E + + Y GE LR FVLP G+ + A +
Sbjct: 74 NDLKWMQRLLFNIGFTFSSTEPRVGEEDLKKLESMADSYYGE-PLRRFVLPAGSSKVAAI 132
Query: 116 DVCRTIARRAERRVATIVREYGFARKSLV--YLNRLSDLLFLMARKIEIEKGKLREV 170
R RRAERR+ T +R G + L+ +NR SD LF MA + +G L EV
Sbjct: 133 HAARAAVRRAERRLVTAMRS-GVSVDPLILRIVNRASDALFAMAVALARAEGSLEEV 188
>gb|AAA21165.1| (U13875) C26E6.11 gene product [Caenorhabditis elegans]
Length = 339
Score = 80.8 bits (196), Expect = 9e-15
Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 14/165 (8%)
Query: 8 GDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEA-RHYLND----EMREIIDRIQMD 62
GD G + L+ + WKD A G DEL+SFLG ND ++ E + R+Q
Sbjct: 142 GDSGQSSLYNNERRWKDDDTFNALGATDELSSFLGVCGASAQNDGSMSDVVETLTRLQCC 201
Query: 63 IYKIMGELGS--------KGDIKGITDEDLKWIEGIIEKYEGEVE-LRSFVLPGGTIESA 113
+ + L + K ++WI I++Y + +R F+L GG + SA
Sbjct: 202 LQDVGAHLATPPKNSSERKQKKTAFDIAMVEWINAEIDRYGDALPAIRQFILSGGGMTSA 261
Query: 114 KLDVCRTIARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMAR 158
+L R I RRAER + ++R+ +L +LNR+SDLLF++ R
Sbjct: 262 QLQYSRAICRRAERSIVPLMRDEDVDPMALKFLNRMSDLLFVLGR 306
>emb|CAB94552.1| (AL359152) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
Length = 190
Score = 78.8 bits (191), Expect = 3e-14
Identities = 60/175 (34%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 2 RVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHY--LNDEMREIIDRI 59
R+ T+ GDKG+T L V K I A +E + +G A L +E+ +++ R+
Sbjct: 6 RIYTRTGDKGTTALGDMSRVPKTDLRISAYADANEANAVIGTAIALGGLPEEVVKVLVRV 65
Query: 60 QMDIYKIMGELGS----KGDIKGITDED--LKWIEGIIEKYEGEVE-LRSFVLPGGTIES 112
Q D++ + +L + + + E + +E ++Y EVE LRSF+LPGGT +
Sbjct: 66 QNDLFDVGADLSTPVVENPEYPPLRVEQFYVDKLEADCDRYLAEVEKLRSFILPGGTAGA 125
Query: 113 AKLDVCRTIARRAERRVATIVREYGFARKSL--VYLNRLSDLLFLMARKIEIEKG 165
A L T+ RRAER + +G L YLNRLSDLLF++AR E G
Sbjct: 126 ALLHQACTVVRRAERSTWAALEAHGETMNPLTATYLNRLSDLLFILARVANKEVG 180
>gb|AAD39014.1| (AF026270) PduO [Salmonella enterica serovar Typhimurium]
Length = 337
Score = 77.6 bits (188), Expect = 8e-14
Identities = 54/165 (32%), Positives = 83/165 (49%), Gaps = 7/165 (4%)
Query: 1 MRVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLNDE-MREIIDRI 59
M + T+ GD G+T LF G V K P +EA GTLDEL + L DE R +++ I
Sbjct: 1 MAIYTRTGDAGTTSLFTGQRVSKTHPRVEAYGTLDELNAALSLCACAAADENHRTLLEAI 60
Query: 60 QMDIYKIMGELGSKGD-----IKGITDEDLKWIEGIIEKYEGEVELRSFVLPGGTIESA- 113
Q ++ EL S + + I+ E++ + +G + + E+A
Sbjct: 61 QQQLFWFSAELASDSEQPSPKQRYISSEEISALGSRYRSGDGPRRTAAQLYFTRRCEAAS 120
Query: 114 KLDVCRTIARRAERRVATIVREYGFARKSLVYLNRLSDLLFLMAR 158
+L RT+ARRAERR+ + E + + Y+NRLSD L+ +AR
Sbjct: 121 RLHFARTLARRAERRLVELATEVNVRQVLMRYINRLSDCLYALAR 165
>gi|11498888 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483111|pir||A69411 conserved hypothetical protein
AF1290 - Archaeoglobus fulgidus
>gi|2649297|gb|AAB89962.1| (AE001015) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 162
Score = 74.1 bits (179), Expect = 9e-13
Identities = 53/154 (34%), Positives = 90/154 (58%), Gaps = 8/154 (5%)
Query: 9 DKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLNDE-MREIIDRIQMDIYKIM 67
D T+ G+ V KDS GT+DE +F+G AR + DE +RE + ++I K++
Sbjct: 5 DSSLTRTGKGEIVDKDSSFTWYVGTIDEANAFIGLARVFSKDEKVRETL----LEIQKML 60
Query: 68 GELGSKGDIKGITDEDLKWIEGIIEKYEGEVEL-RSFVLPGGTIESAKLDVCRTIARRAE 126
+G++ ++ ++++DL+W+ +E++E V+ F++ +A L V R + RRAE
Sbjct: 61 FLVGAEPSLQKLSEKDLEWMLERVEEFERSVKKPHCFIILEKDESTAFLSVARAVVRRAE 120
Query: 127 RRVATIVREYGFARKSLV-YLNRLSDLLFLMARK 159
R+ + RE G AR +V +LN+LS LL+LM K
Sbjct: 121 RQAVRLYRE-GKARLLVVEWLNKLSYLLYLMILK 153
>sp|Q10622|YD14_MYCTU HYPOTHETICAL 20.7 KDA PROTEIN RV1314C >gi|7476719|pir||F70775
hypothetical protein Rv1314c - Mycobacterium
tuberculosis (strain H37RV) >gi|1322438|emb|CAA97747.1|
(Z73419) hypothetical protein Rv1314c [Mycobacterium
tuberculosis]
Length = 193
Score = 72.6 bits (175), Expect = 3e-12
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
Query: 2 RVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARH--YLNDEMREIIDRI 59
R+ T+ GD G+T L V K + A DE + +G A + + ++ +++ +I
Sbjct: 7 RIYTRTGDDGTTGLSDMSRVAKTDARLVAYADCDEANAAIGAALALGHPDTQITDVLRQI 66
Query: 60 QMDIYKIMGELGS------KGDIKGITDEDLKWIEGIIEKYE-GEVELRSFVLPGGTIES 112
Q D++ +L + K I + +EG + Y G L+SFVLPGG+ S
Sbjct: 67 QNDLFDAGADLSTPIVENPKHPPLRIAQSYIDRLEGWCDAYNAGLPALKSFVLPGGSPLS 126
Query: 113 AKLDVCRTIARRAERRVATIVREY--GFARKSLVYLNRLSDLLFLMAR 158
A L V RT+ RRAER V + G + YLNRLSDLLF+++R
Sbjct: 127 ALLHVARTVVRRAERSAWAAVDAHPEGVSVLPAKYLNRLSDLLFILSR 174
>sp|P53523|YD14_MYCLE HYPOTHETICAL 20.9 KDA PROTEIN U471A >gi|7476033|pir||T09970
conserved hypothetical protein u471a - Mycobacterium
leprae >gi|699336|gb|AAA63097.1| (U15186) C. freundii
orfW homologue [Mycobacterium leprae]
Length = 191
Score = 71.4 bits (172), Expect = 6e-12
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 2 RVTTKVGDKGSTKLFGGDEVWKDSPIIEANGTLDELTSFLGEARHYLNDEMR--EIIDRI 59
R+ T+ GD G+T L V K + A DE S +G A N + + +++ +I
Sbjct: 7 RIYTRTGDNGTTGLSDFSRVAKTDLRLVAYADCDETNSAIGVALALGNPDQKITDVLQQI 66
Query: 60 QMDIYKIMGELGS--KGDIKG-------ITDEDLKWIEGIIEKYEGEVE-LRSFVLPGGT 109
Q D++ +L + + ++ IT + +E + Y + L SFVLPGG+
Sbjct: 67 QNDLFDAGADLSTPMQDSVRNPEYPQLRITQTHIDRLEEWCDTYNTPLPTLNSFVLPGGS 126
Query: 110 IESAKLDVCRTIARRAERRVATIVREYGFARKSL--VYLNRLSDLLFLMAR 158
SA L V RT+ARRAER V + L YLNRLSDLLF+++R
Sbjct: 127 PLSALLHVARTVARRAERSAWAAVEAHPGVVSMLPAKYLNRLSDLLFILSR 177
>gb|AAG19830.1| (AE005068) Vng1547c [Halobacterium sp. NRC-1]
Length = 163
Score = 69.5 bits (167), Expect = 2e-11
Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 19 DEVWKDSPIIEANGTLDELTSFLGEARHYLNDEMREIIDRIQMDIYKIMGELGS---KGD 75
D V K SP IEA GT+DEL + +G R ++ + Q ++ + + + + D
Sbjct: 2 DRVSKASPRIEAYGTVDELNAAVGAIRPTDIADLDAWLREAQNHLHVVQADFANPEPEPD 61
Query: 76 IKGITDEDLKWIEGIIEKYEGEVE-LRSFVLPGGTIESAKLDVCRTIARRAERRVATI-- 132
IT E + +E I+ E ++ L SF+LPGG+ A L R + RRAERR +
Sbjct: 62 DPQITAEHVTHVEKWIDHCEARLDPLESFILPGGSEAGAALHQARAVCRRAERRAVALQD 121
Query: 133 -VREYGFARKSLVYLNRLSDLLFLMAR 158
+ ++ YLNRLSD LF+ AR
Sbjct: 122 HEPDDAVNDTAVAYLNRLSDALFVFAR 148
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.140 0.393
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61898150
Number of Sequences: 2977
Number of extensions: 2490793
Number of successful extensions: 7093
Number of sequences better than 1.0e-10: 21
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 7060
Number of HSP's gapped (non-prelim): 21
length of query: 172
length of database: 189,106,746
effective HSP length: 55
effective length of query: 117
effective length of database: 156,189,961
effective search space: 18274225437
effective search space used: 18274225437
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)