BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0929 (PAB0929) DE:Hypothetical protein
(223 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75051 hypothetical protein PAB0929 - Pyrococcus abyssi (st... 436 e-121
sp|O58371|Y637_PYRHO HYPOTHETICAL PROTEIN PH0637 >gi|7518756|pir... 386 e-106
sp|Q9Z7M3|Y681_CHLPN HYPOTHETICAL PROTEIN CPN0681/CP0066 >gi|746... 117 9e-26
pir||F81744 conserved hypothetical protein TC0063 [imported] - C... 117 1e-25
sp|P44271|YG03_HAEIN HYPOTHETICAL PROTEIN HI1603 >gi|1074861|pir... 113 2e-24
pir||G82075 conserved hypothetical protein VC2441 [imported] - V... 112 3e-24
sp|O84697|Y691_CHLTR HYPOTHETICAL PROTEIN CT691 >gi|7468803|pir|... 112 4e-24
gi|11499388 conserved hypothetical protein [Archaeoglobus fulgid... 105 4e-22
sp|O28475|YH99_ARCFU HYPOTHETICAL PROTEIN AF1799 105 4e-22
pir||C82996 conserved hypothetical protein PA5208 [imported] - P... 92 6e-18
pir||C72400 conserved hypothetical protein - Thermotoga maritima... 88 9e-17
pir||A75120 hypothetical protein PAB0513 - Pyrococcus abyssi (st... 80 3e-14
sp|Q9X016|Y914_THEMA HYPOTHETICAL PROTEIN TM0914 >gi|7462107|pir... 73 4e-12
>pir||F75051 hypothetical protein PAB0929 - Pyrococcus abyssi (strain Orsay)
>gi|5458820|emb|CAB50307.1| (AJ248287) hypothetical
protein [Pyrococcus abyssi]
Length = 223
Score = 436 bits (1109), Expect = e-121
Identities = 223/223 (100%), Positives = 223/223 (100%)
Query: 1 MQVWKKLFAKSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVAD 60
MQVWKKLFAKSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVAD
Sbjct: 1 MQVWKKLFAKSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVAD 60
Query: 61 RIKSELRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIREEPEAVPGEIKEL 120
RIKSELRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIREEPEAVPGEIKEL
Sbjct: 61 RIKSELRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIREEPEAVPGEIKEL 120
Query: 121 IVKMGKESIKAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKIDGLDSKLM 180
IVKMGKESIKAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKIDGLDSKLM
Sbjct: 121 IVKMGKESIKAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKIDGLDSKLM 180
Query: 181 ELVFKSELNWKDGMYILNIARTVSRISDKAKDAAERIRVLMNK 223
ELVFKSELNWKDGMYILNIARTVSRISDKAKDAAERIRVLMNK
Sbjct: 181 ELVFKSELNWKDGMYILNIARTVSRISDKAKDAAERIRVLMNK 223
>sp|O58371|Y637_PYRHO HYPOTHETICAL PROTEIN PH0637 >gi|7518756|pir||F71108 hypothetical
protein PH0637 - Pyrococcus horikoshii
>gi|3257045|dbj|BAA29728.1| (AP000003) 226aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 226
Score = 386 bits (980), Expect = e-106
Identities = 190/223 (85%), Positives = 213/223 (95%)
Query: 1 MQVWKKLFAKSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVAD 60
MQVWKKLFAKSPFKPLIRHAEVVVQTVETLEKALD+WA+G YE MK+YAKKVDDLED+AD
Sbjct: 4 MQVWKKLFAKSPFKPLIRHAEVVVQTVETLEKALDSWARGDYENMKEYAKKVDDLEDIAD 63
Query: 61 RIKSELRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIREEPEAVPGEIKEL 120
+IKSELRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLI+ +++P +IK++
Sbjct: 64 KIKSELRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIKRNLDSIPNDIKDI 123
Query: 121 IVKMGKESIKAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKIDGLDSKLM 180
I+KMGKESIKAAKLVYEAIKQLD VLESGFA++EI++EY+IIK+IEEVESKIDGLDSKLM
Sbjct: 124 ILKMGKESIKAAKLVYEAIKQLDNVLESGFAEKEIKKEYKIIKQIEEVESKIDGLDSKLM 183
Query: 181 ELVFKSELNWKDGMYILNIARTVSRISDKAKDAAERIRVLMNK 223
E+VF SEL+WKDG+YILNIART+S ISDKAKD AERIRVLMNK
Sbjct: 184 EIVFTSELDWKDGLYILNIARTLSNISDKAKDTAERIRVLMNK 226
>sp|Q9Z7M3|Y681_CHLPN HYPOTHETICAL PROTEIN CPN0681/CP0066 >gi|7468172|pir||E72049
conserved hypothetical protein CP0066 [imported] -
Chlamydophila pneumoniae (strains CWL029 and AR39)
>gi|4376982|gb|AAD18820.1| (AE001650) CT691 hypothetical
protein [Chlamydophila pneumoniae CWL029]
>gi|7189003|gb|AAF37955.1| (AE002170) conserved
hypothetical protein [Chlamydophila pneumoniae AR39]
>gi|8979053|dbj|BAA98888.1| (AP002547) CT691
hypothetical protein [Chlamydophila pneumoniae J138]
Length = 224
Score = 117 bits (291), Expect = 9e-26
Identities = 73/225 (32%), Positives = 123/225 (54%), Gaps = 4/225 (1%)
Query: 1 MQVWKKLFAKSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVAD 60
MQ +LF +SPF PL H E+VV VE + A G+YEE+ + AK V D E AD
Sbjct: 1 MQTLARLFGQSPFAPLQAHLEMVVSCVEYMLPIFTALRDGRYEELLEMAKLVSDKEYQAD 60
Query: 61 RIKSELRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIREEPEAVPGEIKEL 120
IK+++R+ + + L MP+ R ILE + +QD IAD AED A L IR P ++ L
Sbjct: 61 CIKNDMRNHLPAGLFMPISRAGILEIISIQDSIADTAEDVAILLTIR-RLNFYP-SMETL 118
Query: 121 IVKMGKESIKAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKIDGLDSKLM 180
+ +++++A +L + + + +LES F R+ ++ ++ + + E + D L +LM
Sbjct: 119 FFRFLEKNLEAFELTMTLLHEFNQLLESSFGGRKADKARLLVGRVAKSEHESDVLQRELM 178
Query: 181 ELVFKSE--LNWKDGMYILNIARTVSRISDKAKDAAERIRVLMNK 223
++ F + + K+ L + R + ISD ++ A RI + + +
Sbjct: 179 QIFFSDDFIIPEKEFYLWLQVIRRTAGISDSSEKLAHRINMTLEE 223
>pir||F81744 conserved hypothetical protein TC0063 [imported] - Chlamydia
muridarum (strain Nigg) >gi|7190100|gb|AAF38948.1|
(AE002274) conserved hypothetical protein [Chlamydia
muridarum]
Length = 224
Score = 117 bits (290), Expect = 1e-25
Identities = 67/225 (29%), Positives = 126/225 (55%), Gaps = 4/225 (1%)
Query: 1 MQVWKKLFAKSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVAD 60
MQV LF +SPF PL H E+V ++E L A +G Y+ ++ A+ V E AD
Sbjct: 1 MQVLASLFGRSPFSPLQAHVELVSASIEVLFPLFSAIKEGDYQRVEALAQLVSSKERQAD 60
Query: 61 RIKSELRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIREEPEAVPGEIKEL 120
+K+++R + S + +PV R +LE + QD +AD AED A L ++E E +E+
Sbjct: 61 GVKNDIRSHLASGVFIPVSRLAMLEIISTQDSVADCAEDIAILLTVKE--LRFYPEFEEI 118
Query: 121 IVKMGKESIKAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKIDGLDSKLM 180
+ ++++++ ++V +AI+++D++LES F E+ ++ E+ +E + D L +LM
Sbjct: 119 FFQFLQKTVQSFEVVAKAIREMDLLLESSFGGCRAEKTRVLVNEVSNLEHECDLLQRELM 178
Query: 181 ELVFKS--ELNWKDGMYILNIARTVSRISDKAKDAAERIRVLMNK 223
+++F + KD + I + +S IS+ ++ A R+ + + +
Sbjct: 179 KILFSENFSIETKDFVLWTQIIKRLSGISNNSEKLAYRVGMTLEE 223
>sp|P44271|YG03_HAEIN HYPOTHETICAL PROTEIN HI1603 >gi|1074861|pir||B64038 hypothetical
protein HI1603 - Haemophilus influenzae (strain Rd KW20)
>gi|1574458|gb|AAC23247.1| (U32834) conserved
hypothetical protein [Haemophilus influenzae Rd]
Length = 226
Score = 113 bits (279), Expect = 2e-24
Identities = 64/217 (29%), Positives = 121/217 (55%), Gaps = 4/217 (1%)
Query: 7 LFAKSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVADRIKSEL 66
LFA SP KPL +H+E V + + L +E+ ++ ++ E AD +K E+
Sbjct: 9 LFAHSPLKPLQKHSEKVTECSDLLIPFFQTTFSKNWEQAEEKRLEISQCEREADSLKREI 68
Query: 67 RDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIREEPEAVPGEIKELIVKMGK 126
R + L +P+ RTD+LE + QDK+A+ A+D A ++ R+ +P E++E + K
Sbjct: 69 RLKLPRGLFLPIDRTDLLELVTQQDKLANYAKDIAGRMIGRQ--FGIPEEMQEEFLHYVK 126
Query: 127 ESIKAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKIDGLDSKLMELVF-- 184
S+ A + I+++D +LE+GF RE++ ++I+E++ +E D + KL ++++
Sbjct: 127 RSLDAIHQAHRVIEEMDKLLETGFKGRELKLVNDMIQELDSIEDDTDQMQIKLRKMLYTI 186
Query: 185 KSELNWKDGMYILNIARTVSRISDKAKDAAERIRVLM 221
+S N D M++ I V ++D+A+ RI +++
Sbjct: 187 ESRYNPIDVMFLYKIIEWVGVLADQAQRVGSRIELML 223
>pir||G82075 conserved hypothetical protein VC2441 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9657017|gb|AAF95583.1|
(AE004314) conserved hypothetical protein [Vibrio
cholerae]
Length = 228
Score = 112 bits (278), Expect = 3e-24
Identities = 67/219 (30%), Positives = 118/219 (53%), Gaps = 4/219 (1%)
Query: 7 LFAKSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVADRIKSEL 66
LFAKSP KPL RH V + L + +G +E+ + ++ LE AD +K E+
Sbjct: 11 LFAKSPIKPLQRHVVCVNECCSHLINFFEVCNKGDWEKAGEIRAQISHLEKEADVLKREI 70
Query: 67 RDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIREEPEAVPGEIKELIVKMGK 126
R + L MPV R+D+LE L QDK+A+ A+D A + R+ +P ++E + +
Sbjct: 71 RLKLPRGLFMPVDRSDMLELLTQQDKLANLAKDIAGRVYGRQ--LVIPEPLQENFIAYVR 128
Query: 127 ESIKAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKIDGLDSKLME--LVF 184
+ AA I +LD +LE+GF RE+ E+I +++ +E D + +L + +
Sbjct: 129 RCLDAANQAQNVINELDELLETGFKGREVTLVAEMIHQLDVIEDDTDSMQIRLRQQLMAI 188
Query: 185 KSELNWKDGMYILNIARTVSRISDKAKDAAERIRVLMNK 223
+S++N D M++ I V I+D+A+ R+ +++++
Sbjct: 189 ESKMNPIDVMFLYKILEWVGGIADQAQRVGARLELMLSR 227
>sp|O84697|Y691_CHLTR HYPOTHETICAL PROTEIN CT691 >gi|7468803|pir||G71483 hypothetical
protein CT691 - Chlamydia trachomatis (serotype D,
strain UW3/Cx) >gi|3329144|gb|AAC68286.1| (AE001339)
hypothetical protein [Chlamydia trachomatis]
Length = 224
Score = 112 bits (277), Expect = 4e-24
Identities = 67/225 (29%), Positives = 124/225 (54%), Gaps = 4/225 (1%)
Query: 1 MQVWKKLFAKSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVAD 60
MQV LF +SPF PL H E+V T+ L A +G YE + A+ V E AD
Sbjct: 1 MQVLASLFGQSPFAPLQAHLELVSSTINVLFPLFSALKEGDYERVGVLAQLVSSKERQAD 60
Query: 61 RIKSELRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIREEPEAVPGEIKEL 120
+K+++R + S + +PV R +LE + +QD +AD AED A L ++ E + P E +EL
Sbjct: 61 GMKNDVRRHLASGVFLPVSRAALLEIISIQDSLADCAEDIAILLTVK-ELQFYP-EFEEL 118
Query: 121 IVKMGKESIKAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKIDGLDSKLM 180
+ ++++++ + V + I+++D +LES F ++ ++ E+ +E + D L +LM
Sbjct: 119 FFEFLQKTVQSFEAVAKTIREMDRLLESSFGGNRADKTRVLVSEVSNLEHECDLLQRELM 178
Query: 181 ELVFKSE--LNWKDGMYILNIARTVSRISDKAKDAAERIRVLMNK 223
++ F + + K + + I + +S IS+ ++ A R+ + + +
Sbjct: 179 KVFFSDDFAIGTKGFVLWMQIIKGISGISNNSEKLAYRVSMTLEE 223
>gi|11499388 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483168|pir||F69474 conserved hypothetical protein
AF1799 - Archaeoglobus fulgidus
>gi|2648745|gb|AAB89448.1| (AE000978) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 249
Score = 105 bits (260), Expect = 4e-22
Identities = 68/222 (30%), Positives = 124/222 (55%), Gaps = 13/222 (5%)
Query: 6 KLFAKSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVADRIKSE 65
++F SPF+ L +HA + + V L++ +A +G YEE+++ +++D+LE AD+IK E
Sbjct: 32 EVFGYSPFRSLAQHARMCGRAVGLLQQQFEALRRGNYEEVEELREEIDELEHHADQIKEE 91
Query: 66 LRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIRE--EPEAVPGEIKELIVK 123
+R ++T L++PV R D+LE+L +QD I + E + R+ PE V E L+ K
Sbjct: 92 IRGNVTKSLMLPVDRHDLLEFLKVQDDILNNCEHVGHMVTFRKVSAPEDVWDEFLVLLSK 151
Query: 124 MGKESIKAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKID----GLDSKL 179
+ E + + + E I QL +E+ F+ +E+ R E + IE++E + D GL +KL
Sbjct: 152 L-MEIVNNYEEMVERIMQL---VETSFSKKEVNRALEYVPIIEQLEHECDLIQIGLHTKL 207
Query: 180 MELVFKSELNWKDGMYILNIARTVSRISDKAKDAAERIRVLM 221
L + L D ++ + +++ A A++R R+++
Sbjct: 208 FNLENSNPL---DIQLMVTWVVHLGYVANAAARASDRFRIMI 246
>sp|O28475|YH99_ARCFU HYPOTHETICAL PROTEIN AF1799
Length = 226
Score = 105 bits (260), Expect = 4e-22
Identities = 68/222 (30%), Positives = 124/222 (55%), Gaps = 13/222 (5%)
Query: 6 KLFAKSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVADRIKSE 65
++F SPF+ L +HA + + V L++ +A +G YEE+++ +++D+LE AD+IK E
Sbjct: 9 EVFGYSPFRSLAQHARMCGRAVGLLQQQFEALRRGNYEEVEELREEIDELEHHADQIKEE 68
Query: 66 LRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIRE--EPEAVPGEIKELIVK 123
+R ++T L++PV R D+LE+L +QD I + E + R+ PE V E L+ K
Sbjct: 69 IRGNVTKSLMLPVDRHDLLEFLKVQDDILNNCEHVGHMVTFRKVSAPEDVWDEFLVLLSK 128
Query: 124 MGKESIKAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKID----GLDSKL 179
+ E + + + E I QL +E+ F+ +E+ R E + IE++E + D GL +KL
Sbjct: 129 L-MEIVNNYEEMVERIMQL---VETSFSKKEVNRALEYVPIIEQLEHECDLIQIGLHTKL 184
Query: 180 MELVFKSELNWKDGMYILNIARTVSRISDKAKDAAERIRVLM 221
L + L D ++ + +++ A A++R R+++
Sbjct: 185 FNLENSNPL---DIQLMVTWVVHLGYVANAAARASDRFRIMI 223
>pir||C82996 conserved hypothetical protein PA5208 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9951514|gb|AAG08593.1|AE004933_9 (AE004933)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 225
Score = 91.7 bits (224), Expect = 6e-18
Identities = 57/217 (26%), Positives = 111/217 (50%), Gaps = 4/217 (1%)
Query: 7 LFAKSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVADRIKSEL 66
LF +SP P+ +H + L A + +++ + + LE ADR+K +
Sbjct: 9 LFGRSPIGPMQQHIAKAHECAAGLLPFFRAVIAEDWAQVEQVQQDMVRLEQEADRLKKHV 68
Query: 67 RDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIREEPEAVPGEIKELIVKMGK 126
R + L +PV R+D+LE L +QDK+A+ A+D A +L R +P ++ ++ +
Sbjct: 69 RMHLPKSLFLPVPRSDLLELLSVQDKVANRAKDIAGLMLGRR--MRIPLPLQGQMLAYVQ 126
Query: 127 ESIKAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKIDGLDSKLMELVFK- 185
S+ A+ + +L+ +LE+GF RE +++E+E +E+ D + ++ +F+
Sbjct: 127 RSVDASAQALRVVNELNELLETGFGGRETSLVESMVEELEAIENDTDRIQVEVRRELFRL 186
Query: 186 -SELNWKDGMYILNIARTVSRISDKAKDAAERIRVLM 221
SEL D M++ I + ++D+A+ R+ L+
Sbjct: 187 ESELPPVDVMFLYQIIEWIGDVADRAQRVGNRLEQLL 223
>pir||C72400 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4980756|gb|AAD35348.1|AE001708_16 (AE001708)
conserved hypothetical protein [Thermotoga maritima]
Length = 222
Score = 87.8 bits (214), Expect = 9e-17
Identities = 63/219 (28%), Positives = 110/219 (49%), Gaps = 5/219 (2%)
Query: 5 KKLFAKSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVADRIKS 64
K L +SP LI + V L+ A++ + GK+ E + +V LE +D IKS
Sbjct: 6 KMLPEESPIDLLINLSRRGEAAVVLLKDAIEDYFTGKFGE--GHLNRVISLERESDEIKS 63
Query: 65 ELRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIREEPEAVPGEIKELIVKM 124
+L+ ++ D L +H D+I D D +L E VP IKEL ++
Sbjct: 64 KLKKMYLKMKYTYFEKDDFLYIVHKADEILDVVRDIVI-MLDMNRVEDVPENIKELFAEL 122
Query: 125 GKESIKAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKIDGLDSKLMELVF 184
+ + + EAI+QL + ESGF+ E E+E I ++ E ++D + L + ++
Sbjct: 123 VENVLDTIRETTEAIEQLRTLAESGFSPFEKEKEEREIFDVSMEEREVDTISRNLGKKLY 182
Query: 185 --KSELNWKDGMYILNIARTVSRISDKAKDAAERIRVLM 221
K+ +N D +++ +AR +S+I+D+ KD +RI ++
Sbjct: 183 SLKNSMNPVDLIFLNKVARLISKIADQGKDITKRINSIL 221
>pir||A75120 hypothetical protein PAB0513 - Pyrococcus abyssi (strain Orsay)
>gi|5458185|emb|CAB49674.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 212
Score = 79.6 bits (193), Expect = 3e-14
Identities = 50/215 (23%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 10 KSPFKPLIRHAEVVVQTVETLEKALDAWAQGKYEEMKDYAKKVDDLEDVADRIKSELRDS 69
K F L H E V T+ + A+ G ++ + ++V+D E AD ++ +
Sbjct: 7 KEVFNKLREHLEAVDATLSAFRQLFVAYLSGDLDKAERLLREVEDKESYADELRRSIELM 66
Query: 70 ITSKLLMPVQRTDILEYLHMQDKIADAAEDTAKWLLIREEPEAVPGEIKELIVKMGKESI 129
+ +P R D + + D +ADAAE A L+ + +PG+++ I+++ ES+
Sbjct: 67 LYGGAFIPASRGDYIRLSELIDNVADAAESAAHTLMFAK--PNIPGDLESEILRLVDESL 124
Query: 130 KAAKLVYEAIKQLDVVLESGFADREIEREYEIIKEIEEVESKIDGLDSKLMELVF-KSEL 188
K + EA+ L + +E+ E+ KE E E + D ++ L+ +F ++++
Sbjct: 125 KTYTYLKEAVLAL---------EESVEKALELSKETETQEERADKIEYDLLRKIFSRNDI 175
Query: 189 NWKDGMYILNIARTVSRISDKAKDAAERIRVLMNK 223
+ + + V I+D+A+DA++++ ++ K
Sbjct: 176 STYAKLIWNQVITKVGDIADRAEDASDQVMLIAVK 210
>sp|Q9X016|Y914_THEMA HYPOTHETICAL PROTEIN TM0914 >gi|7462107|pir||A72320 conserved
hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981450|gb|AAD35995.1|AE001755_18 (AE001755)
conserved hypothetical protein [Thermotoga maritima]
Length = 213
Score = 72.6 bits (175), Expect = 4e-12
Identities = 47/192 (24%), Positives = 99/192 (51%), Gaps = 21/192 (10%)
Query: 42 YEEMKDYAKKVDDLEDV----------ADRIKSELRDSITSKLLMPVQRTDILEYLHMQD 91
++ +K Y + DD+E + ADR++ + + S +P R D+L + D
Sbjct: 30 FDLIKKYLEDTDDIESLYLRTQRLESEADRLRRKTEMEMYSGAFLPNFRGDLLGLIESVD 89
Query: 92 KIADAAEDTAKWLLIREEPEAVPGEIKELIVKMGKESIKAAKLVYEAIKQLDVVLESGFA 151
K+A+ AE A L++ ++PE VP E+K+LI+ + S+KA + + A+K F
Sbjct: 90 KVANKAEYVAD-LIVLQKPE-VPHELKDLILSQMEYSLKAYESLKSALK---------FL 138
Query: 152 DREIEREYEIIKEIEEVESKIDGLDSKLMELVFKSELNWKDGMYILNIARTVSRISDKAK 211
++ER E + +E+ E D ++ + +F+ ++ + + + R++ I+D+ +
Sbjct: 139 FEDLERVEEFVLAVEKYEHDEDAVERTALRKLFEMDIERSVKLEVKELIRSIGDIADRTE 198
Query: 212 DAAERIRVLMNK 223
D ++R +++ K
Sbjct: 199 DVSDRAEIILLK 210
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.315 0.133 0.359
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71892463
Number of Sequences: 2977
Number of extensions: 2681351
Number of successful extensions: 10581
Number of sequences better than 1.0e-10: 13
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 10560
Number of HSP's gapped (non-prelim): 13
length of query: 223
length of database: 189,106,746
effective HSP length: 61
effective length of query: 162
effective length of database: 152,599,039
effective search space: 24721044318
effective search space used: 24721044318
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (22.0 bits)
S2: 163 (67.9 bits)