BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0959 (PAB0959) DE:translation initiation factor aIF-2,
subunit beta, putative
(140 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9UYR6|IF2B_PYRAB PROBABLE TRANSLATION INITIATION FACTOR 2 BE... 291 3e-78
sp|O58312|IF2B_PYRHO PROBABLE TRANSLATION INITIATION FACTOR 2 BE... 290 4e-78
sp|O27797|IF2B_METTH PROBABLE TRANSLATION INITIATION FACTOR 2 BE... 166 1e-40
sp|Q57562|IF2B_METJA PROBABLE TRANSLATION INITIATION FACTOR 2 BE... 150 5e-36
gi|11499907 translation initiation factor eIF-2, subunit beta, p... 127 6e-29
emb|CAC11744.1| (AL445064) translation initiation factor eIF-2, ... 114 6e-25
sp|Q9YBR6|IF2B_AERPE PROBABLE TRANSLATION INITIATION FACTOR 2 BE... 113 1e-24
sp|P41375|IF2B_DROME EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ... 110 8e-24
sp|P41035|IF2B_RABIT EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ... 109 2e-23
pir||JC2329 translation initiation factor eIF-2 beta chain - rabbit 109 2e-23
gi|11420567 eukaryotic translation initiation factor 2, subunit ... 109 2e-23
gi|4503505 eukaryotic translation initiation factor 2, subunit 2... 108 3e-23
emb|CAC08449.1| (AJ294707) eukaryote initiation factor 2 beta [G... 108 4e-23
sp|O24473|IF2B_WHEAT EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ... 103 8e-22
sp|P56329|IF2B_SCHPO PROBABLE EUKARYOTIC TRANSLATION INITIATION ... 103 1e-21
sp|P55871|IF2B_MALDO EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ... 102 1e-21
gb|AAG19619.1| (AE005051) translation initiation factor eIF-2 su... 100 7e-21
sp|Q41969|IF2B_ARATH EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ... 99 2e-20
gb|AAK42529.1| Translation initiation factor 2, beta subunit (ei... 95 3e-19
gi|6325018 beta subunit of translation initiation factor eIF-2; ... 94 9e-19
sp|Q21230|IF2B_CAEEL PUTATIVE EUKARYOTIC TRANSLATION INITIATION ... 89 2e-17
gb|AAF21202.1|AC013483_26 (AC013483) putative eukaryotic transla... 73 2e-12
>sp|Q9UYR6|IF2B_PYRAB PROBABLE TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
>gi|7450842|pir||E75056 probable translation initiation
factor aif-2, subun it beta PAB0959 - Pyrococcus abyssi
(strain Orsay) >gi|5458859|emb|CAB50346.1| (AJ248287)
translation initiation factor aIF-2, subun it beta,
putative [Pyrococcus abyssi]
Length = 140
Score = 291 bits (737), Expect = 3e-78
Identities = 140/140 (100%), Positives = 140/140 (100%)
Query: 1 MEIDYYDYEKLLEKAYEELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDP 60
MEIDYYDYEKLLEKAYEELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDP
Sbjct: 1 MEIDYYDYEKLLEKAYEELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDP 60
Query: 61 QHLLKFLLREIATAGTLEGKRVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKR 120
QHLLKFLLREIATAGTLEGKRVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKR
Sbjct: 61 QHLLKFLLREIATAGTLEGKRVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKR 120
Query: 121 DRFYFLKCEACGAETPIQHL 140
DRFYFLKCEACGAETPIQHL
Sbjct: 121 DRFYFLKCEACGAETPIQHL 140
>sp|O58312|IF2B_PYRHO PROBABLE TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
>gi|7450838|pir||D71104 probable translation initiation
factor eIF-2 beta - Pyrococcus horikoshii
>gi|3257011|dbj|BAA29694.1| (AP000003) 140aa long
hypothetical translation initiation factor eIF-2 beta
[Pyrococcus horikoshii]
Length = 140
Score = 290 bits (735), Expect = 4e-78
Identities = 139/140 (99%), Positives = 140/140 (99%)
Query: 1 MEIDYYDYEKLLEKAYEELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDP 60
MEIDYYDYEKLLEKAYEELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDP
Sbjct: 1 MEIDYYDYEKLLEKAYEELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDP 60
Query: 61 QHLLKFLLREIATAGTLEGKRVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKR 120
QHLLKFLLREIATAGTLEGKRVVLQGRFTPYLIANK+KKYIKEYVICPVCGSPDTKIIKR
Sbjct: 61 QHLLKFLLREIATAGTLEGKRVVLQGRFTPYLIANKLKKYIKEYVICPVCGSPDTKIIKR 120
Query: 121 DRFYFLKCEACGAETPIQHL 140
DRFYFLKCEACGAETPIQHL
Sbjct: 121 DRFYFLKCEACGAETPIQHL 140
>sp|O27797|IF2B_METTH PROBABLE TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
>gi|7450839|pir||B69103 translation initiation factor
eIF-2, beta subunit - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622899|gb|AAB86235.1| (AE000932) translation
initiation factor eIF-2, beta subunit
[Methanobacterium thermoautotrophicum]
Length = 135
Score = 166 bits (416), Expect = 1e-40
Identities = 77/134 (57%), Positives = 103/134 (76%), Gaps = 1/134 (0%)
Query: 7 DYEKLLEKAYEELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDPQHLLKF 66
DYEKLLE+A ++LP V K RFEVP A I+GN+T I+NF+++A+ALNRDPQHLLKF
Sbjct: 3 DYEKLLERAIDQLPPEVFETK-RFEVPKAYSVIQGNRTFIQNFREVADALNRDPQHLLKF 61
Query: 67 LLREIATAGTLEGKRVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKRDRFYFL 126
LLRE+ TAG LEG R +LQG+FT +LI +I+ Y+ ++VIC C PDT+II+ R L
Sbjct: 62 LLRELGTAGNLEGGRAILQGKFTHFLINERIEDYVNKFVICHECNRPDTRIIREGRISLL 121
Query: 127 KCEACGAETPIQHL 140
KCEACGA+ P++++
Sbjct: 122 KCEACGAKAPLKNV 135
>sp|Q57562|IF2B_METJA PROBABLE TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
>gi|2129319|pir||A64312 probable translation initiation
factor eIF-2 beta homolog - Methanococcus jannaschii
>gi|1498862|gb|AAB98077.1| (U67467) translation
initiation factor aIF-2, subunit beta, putative (aIF2B)
[Methanococcus jannaschii]
Length = 143
Score = 150 bits (376), Expect = 5e-36
Identities = 70/136 (51%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
Query: 3 IDYYDYEKLLEKAYEELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDPQH 62
IDYYDY+ LL++A ++P+ V K RFE+P + IEGN+TII NF+++A+A+NRD +
Sbjct: 7 IDYYDYKALLKRARSQIPDYV-FQKDRFELPEIEILIEGNRTIIRNFRELAKAVNRDEEF 65
Query: 63 LLKFLLREIATAGTLEGKRVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKRDR 122
K+LL+E +AG LEG R++LQ R +P L+ ++I +++EYVIC CG PDTKIIK R
Sbjct: 66 FAKYLLKETGSAGNLEGGRLILQRRISPELLKSRINDFLREYVICRECGKPDTKIIKEGR 125
Query: 123 FYFLKCEACGAETPIQ 138
+ LKC ACGA PI+
Sbjct: 126 VHLLKCMACGAIRPIR 141
>gi|11499907 translation initiation factor eIF-2, subunit beta, putative
[Archaeoglobus fulgidus]
>gi|3122238|sp|O27958|IF2B_ARCFU PROBABLE TRANSLATION
INITIATION FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
>gi|7450840|pir||F69540 translation initiation factor
eIF-2 beta homolog - Archaeoglobus fulgidus
>gi|2648194|gb|AAB88931.1| (AE000944) translation
initiation factor eIF-2, subunit beta, putative
[Archaeoglobus fulgidus]
Length = 137
Score = 127 bits (316), Expect = 6e-29
Identities = 55/133 (41%), Positives = 90/133 (67%)
Query: 8 YEKLLEKAYEELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDPQHLLKFL 67
YE+LLE+A+E+L + + RFE+P + EG +TI++NF IA+ LNR HL K++
Sbjct: 5 YEELLERAFEKLADKDVVRRERFEIPRVSIQREGARTILKNFSQIAKTLNRSEDHLYKYI 64
Query: 68 LREIATAGTLEGKRVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKRDRFYFLK 127
++ + TAG ++ R+VLQG+FT + ++ Y++ YV+C C SPDT+ IK +R L+
Sbjct: 65 VKSLGTAGFIDNGRLVLQGKFTESELQKEVDDYVRLYVLCRECNSPDTEFIKEERVLMLR 124
Query: 128 CEACGAETPIQHL 140
C ACGA+ P++++
Sbjct: 125 CLACGAKHPVRNI 137
>emb|CAC11744.1| (AL445064) translation initiation factor eIF-2, beta chain related
protein [Thermoplasma acidophilum]
Length = 209
Score = 114 bits (282), Expect = 6e-25
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Query: 7 DYEKLLEKAYEELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDPQHLLKF 66
DYEKLLEKA L + K+ R ++P + EG TII NF+DI + +NRDP+H++KF
Sbjct: 4 DYEKLLEKAKNVLSSSTKNI-DRLKIPDPEIIREGKATIIRNFQDIVDIINRDPEHIIKF 62
Query: 67 LLREIATAGTLEGKRVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKRDRFYFL 126
L RE T G+R+++ + T + +K+ +YI YV C CGS DT+I K R L
Sbjct: 63 LTREFGTNIVQNGRRLIINRKLTLEELLDKMNEYINTYVRCYECGSLDTEIQKSGRISLL 122
Query: 127 KCEACGAETPI 137
C+ACGA+ PI
Sbjct: 123 VCKACGAQHPI 133
>sp|Q9YBR6|IF2B_AERPE PROBABLE TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
>gi|7450841|pir||F72634 probable translation initiation
factor 2 beta subunit APE1533 - Aeropyrum pernix (strain
K1) >gi|5105218|dbj|BAA80532.1| (AP000061) 153aa long
hypothetical translation initiation factor 2 beta
subunit [Aeropyrum pernix]
Length = 153
Score = 113 bits (280), Expect = 1e-24
Identities = 53/134 (39%), Positives = 92/134 (68%), Gaps = 4/134 (2%)
Query: 7 DYEKLLEKAYEELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDPQHLLKF 66
DY+ LLEK Y+++P K S + +P + G++T+I NF++IA+AL RDP+ + ++
Sbjct: 20 DYDYLLEKLYKKVPP--KSGTSEYRIPEPQIIRIGSQTVIRNFREIAQALKRDPKLVARY 77
Query: 67 LLREIATAGTLEGK--RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKRDRFY 124
L +E+ATA + E + +++L + + ++ ++ ++K YV CP CGS DTK+++++R Y
Sbjct: 78 LQKELATAASYEEESGQLILNVKVSRKVVNQFLQLFMKTYVRCPTCGSIDTKLLRQERAY 137
Query: 125 FLKCEACGAETPIQ 138
LKCEACGAE P++
Sbjct: 138 MLKCEACGAEQPVK 151
>sp|P41375|IF2B_DROME EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT
(EIF-2-BETA) >gi|304676|gb|AAA28504.1| (L19197) eIF-2
beta-subunit [Drosophila melanogaster]
>gi|7294562|gb|AAF49902.1| (AE003541) eIF-2beta gene
product [Drosophila melanogaster]
Length = 312
Score = 110 bits (272), Expect = 8e-24
Identities = 54/138 (39%), Positives = 90/138 (65%), Gaps = 6/138 (4%)
Query: 6 YDYEKLLEKAYEEL----PENVKHHKSRFEV-PGALVTIEGNKTIIENFKDIAEALNRDP 60
Y Y++LL++ +E + P+ K +F + P ++ + KT NF DIA+ L+R P
Sbjct: 153 YTYDELLKRVFEIILDKNPDMAAGRKPKFVMRPPQVLRVGTKKTSFANFMDIAKTLHRLP 212
Query: 61 QHLLKFLLREIATAGTLEG-KRVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIK 119
+HLL FLL E+ T+G+++G ++++++GRF P I N +++YIKEYV C C SP+T + K
Sbjct: 213 KHLLDFLLAELGTSGSMDGNQQLIIKGRFQPKQIENVLRRYIKEYVTCHTCRSPETILQK 272
Query: 120 RDRFYFLKCEACGAETPI 137
R +FL+CE+CG+ +
Sbjct: 273 DTRLFFLQCESCGSRCSV 290
>sp|P41035|IF2B_RABIT EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT
(EIF-2-BETA) >gi|543157|pir||S38536 translation
initiation factor eIF-2 beta chain - rabbit
>gi|415861|emb|CAA52058.1| (X73836) eukaryotic
initiation factor 2 beta (eIF-2 beta) [Oryctolagus
cuniculus]
Length = 333
Score = 109 bits (269), Expect = 2e-23
Identities = 57/132 (43%), Positives = 83/132 (62%), Gaps = 6/132 (4%)
Query: 6 YDYEKLLEKAY----EELPENVKHHKSRFEV-PGALVTIEGNKTIIENFKDIAEALNRDP 60
Y YE+LL + + E+ P+ V K +F + P +V + KT NF DI + L+R P
Sbjct: 174 YTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGTKKTSFVNFTDICKLLHRQP 233
Query: 61 QHLLKFLLREIATAGTLEGK-RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIK 119
+HLL FLL E+ T+G+++G ++V++GRF I N +++YIKEYV C C SPDT + K
Sbjct: 234 KHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQK 293
Query: 120 RDRFYFLKCEAC 131
R YFL+CE C
Sbjct: 294 DTRLYFLQCETC 305
>pir||JC2329 translation initiation factor eIF-2 beta chain - rabbit
Length = 333
Score = 109 bits (269), Expect = 2e-23
Identities = 57/132 (43%), Positives = 83/132 (62%), Gaps = 6/132 (4%)
Query: 6 YDYEKLLEKAY----EELPENVKHHKSRFEV-PGALVTIEGNKTIIENFKDIAEALNRDP 60
Y YE+LL + + E+ P+ V K +F + P +V + KT NF DI + L+R P
Sbjct: 174 YTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGTKKTSFVNFTDICKLLHRQP 233
Query: 61 QHLLKFLLREIATAGTLEGK-RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIK 119
+HLL FLL E+ T+G+++G ++V++GRF I N +++YIKEYV C C SPDT + K
Sbjct: 234 KHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQK 293
Query: 120 RDRFYFLKCEAC 131
R YFL+CE C
Sbjct: 294 DTRLYFLQCETC 305
>gi|11420567 eukaryotic translation initiation factor 2, subunit 2 (beta, 38kD )
[Homo sapiens] >gi|4938295|emb|CAB43741.1| (AL031668)
dJ64K7.2 (eukaryotic translation initiation factor 2,
subunit 2 (beta, 38kD )) [Homo sapiens]
Length = 333
Score = 109 bits (269), Expect = 2e-23
Identities = 57/132 (43%), Positives = 83/132 (62%), Gaps = 6/132 (4%)
Query: 6 YDYEKLLEKAY----EELPENVKHHKSRFEV-PGALVTIEGNKTIIENFKDIAEALNRDP 60
Y YE+LL + + E+ P+ V K +F + P +V + KT NF DI + L+R P
Sbjct: 174 YTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGTKKTSFVNFTDICKLLHRQP 233
Query: 61 QHLLKFLLREIATAGTLEGK-RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIK 119
+HLL FLL E+ T+G+++G ++V++GRF I N +++YIKEYV C C SPDT + K
Sbjct: 234 KHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQK 293
Query: 120 RDRFYFLKCEAC 131
R YFL+CE C
Sbjct: 294 DTRLYFLQCETC 305
>gi|4503505 eukaryotic translation initiation factor 2, subunit 2 (beta, 38kD
); eukaryotic initiation factor 2-beta [Homo sapiens]
>gi|124204|sp|P20042|IF2B_HUMAN EUKARYOTIC TRANSLATION
INITIATION FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
>gi|87941|pir||A31226 translation initiation factor
eIF-2 beta chain - human >gi|109365|pir||S13147 protein
synthesis factor - rabbit >gi|182067|gb|AAA52383.1|
(M29536) translational initiation factor beta subunit
[Homo sapiens] >gi|227237|prf||1617105A initiation
factor 2beta [Oryctolagus cuniculus]
Length = 333
Score = 108 bits (267), Expect = 3e-23
Identities = 57/132 (43%), Positives = 83/132 (62%), Gaps = 6/132 (4%)
Query: 6 YDYEKLLEKAY----EELPENVKHHKSRFEV-PGALVTIEGNKTIIENFKDIAEALNRDP 60
Y YE+LL + + E+ P+ V K +F + P +V + KT NF DI + L+R P
Sbjct: 174 YTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGTKKTSFVNFTDICKLLHRQP 233
Query: 61 QHLLKFLLREIATAGTLEGK-RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIK 119
+HLL FLL E+ T+G+++G ++V++GRF I N +++YIKEYV C C SPDT + K
Sbjct: 234 KHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQK 293
Query: 120 RDRFYFLKCEAC 131
R YFL+CE C
Sbjct: 294 DIRLYFLQCETC 305
>emb|CAC08449.1| (AJ294707) eukaryote initiation factor 2 beta [Gallus gallus]
Length = 334
Score = 108 bits (266), Expect = 4e-23
Identities = 56/132 (42%), Positives = 83/132 (62%), Gaps = 6/132 (4%)
Query: 6 YDYEKLLEKAY----EELPENVKHHKSRFEV-PGALVTIEGNKTIIENFKDIAEALNRDP 60
Y Y++LL + + E+ P+ V K +F + P +V + KT NF DI + L+R P
Sbjct: 175 YTYDELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGTKKTSFVNFTDICKLLHRQP 234
Query: 61 QHLLKFLLREIATAGTLEGK-RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIK 119
+HLL FLL E+ T+G+++G ++V++GRF I N +++YIKEYV C C SPDT + K
Sbjct: 235 KHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQK 294
Query: 120 RDRFYFLKCEAC 131
R YFL+CE C
Sbjct: 295 DTRLYFLQCETC 306
>sp|O24473|IF2B_WHEAT EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT
(EIF-2-BETA) (P38) >gi|7450843|pir||T06992 translation
initiation factor eIF-2 beta chain - wheat
>gi|2306768|gb|AAB65774.1| (U87163) eIF-2 beta subunit
[Triticum aestivum]
Length = 270
Score = 103 bits (255), Expect = 8e-22
Identities = 53/137 (38%), Positives = 85/137 (61%), Gaps = 5/137 (3%)
Query: 6 YDYEKLLEKAYEELPEN---VKHHKSRFEVPGALVTIEGNK-TIIENFKDIAEALNRDPQ 61
Y Y++LL + + L EN + + R + V EG K T+ NF D+ + ++R P+
Sbjct: 116 YKYDELLGRVFNILRENNPDLAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPE 175
Query: 62 HLLKFLLREIATAGTLEGK-RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKR 120
H++ FLL E+ T+G+L+G+ R+V++GRF P +++YI EYVIC C SPDT + K
Sbjct: 176 HVMMFLLAEMGTSGSLDGQQRLVIKGRFAPKNFEAILRRYINEYVICHGCKSPDTILSKE 235
Query: 121 DRFYFLKCEACGAETPI 137
+R +FL+CE CG+ +
Sbjct: 236 NRLFFLRCEQCGSSRSV 252
>sp|P56329|IF2B_SCHPO PROBABLE EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT
(EIF-2-BETA) >gi|7522468|pir||T39024 probable eukaryotic
translation initiation factor 2 beta subunit - fission
yeast (Schizosaccharomyces pombe) (fragment)
>gi|2330846|emb|CAB11076.1| (Z98531) probable eukaryotic
translation initiation factor 2 beta subunit
[Schizosaccharomyces pombe]
Length = 310
Score = 103 bits (254), Expect = 1e-21
Identities = 52/139 (37%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 4 DYYDYEKLLEKAYEELPEN---VKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDP 60
DYY Y +LL + + L N + K ++ + V EG KTI N DI++ ++R
Sbjct: 156 DYY-YPELLNRFFTLLRTNNPELAGEKRKYTIVPPSVHREGKKTIFANISDISKRMHRSL 214
Query: 61 QHLLKFLLREIATAGTLEGK-RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIK 119
H+++FL E+ T+G+++G R++++GRF I N +++YI EYV C C SPDT + K
Sbjct: 215 DHVIQFLFAELGTSGSVDGSSRLIIKGRFQQKQIENVLRRYIVEYVTCKTCKSPDTILTK 274
Query: 120 RDRFYFLKCEACGAETPIQ 138
+R +F+ CEACG+ +Q
Sbjct: 275 ENRIFFMTCEACGSVRSVQ 293
>sp|P55871|IF2B_MALDO EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT
(EIF-2-BETA) >gi|7522212|pir||T17104 translation
initiation factor eIF-2 beta chain - apple tree
(fragment) >gi|1732361|gb|AAC06384.1| (U80269)
translation initiation factor 2 beta [Malus x domestica]
Length = 307
Score = 102 bits (253), Expect = 1e-21
Identities = 52/133 (39%), Positives = 83/133 (62%), Gaps = 5/133 (3%)
Query: 6 YDYEKLLEKAYEELPEN---VKHHKSRFEVPGALVTIEGNK-TIIENFKDIAEALNRDPQ 61
Y YE+LL++ + L EN + + R + V EG K + NF D+ + ++R P
Sbjct: 153 YTYEELLDRVFTILRENNPDLAGDRRRTVMRPPQVLREGTKKAVFVNFMDLCKTMHRQPD 212
Query: 62 HLLKFLLREIATAGTLEGK-RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKR 120
H++ FLL E+ T+G+L+G+ R+V++GRF P +++Y+ EYVIC C SPDT + K
Sbjct: 213 HVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCQSPDTILSKE 272
Query: 121 DRFYFLKCEACGA 133
+R +FL+CE CG+
Sbjct: 273 NRLFFLRCEKCGS 285
>gb|AAG19619.1| (AE005051) translation initiation factor eIF-2 subunit beta; Eif2b
[Halobacterium sp. NRC-1]
Length = 132
Score = 100 bits (247), Expect = 7e-21
Identities = 53/132 (40%), Positives = 78/132 (58%), Gaps = 2/132 (1%)
Query: 7 DYEKLLEKAYEELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDPQHLLKF 66
DYE+ L++A +E P+ V ++RFEVP V EGN T+ ENF+ +AL+R H+LKF
Sbjct: 2 DYEEQLDRAMDEKPD-VTGSETRFEVPDPNVRKEGNVTVYENFQATLDALSRTQDHVLKF 60
Query: 67 LLREIATAGTL-EGKRVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKRDRFYF 125
L E+ T+ ++ E R L G F +++ + Y++ YV CP CG PDT +
Sbjct: 61 LQNEVGTSASIDESGRARLTGEFGQRRVSDTLDAYVETYVTCPECGLPDTNLETDGDTIQ 120
Query: 126 LKCEACGAETPI 137
L CEACGA + +
Sbjct: 121 LHCEACGARSTV 132
>sp|Q41969|IF2B_ARATH EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT
(EIF-2-BETA)
Length = 156
Score = 99.5 bits (244), Expect = 2e-20
Identities = 50/137 (36%), Positives = 85/137 (61%), Gaps = 5/137 (3%)
Query: 6 YDYEKLLEKAYEELPEN---VKHHKSRFEVPGALVTIEGNK-TIIENFKDIAEALNRDPQ 61
Y Y++LL + + L EN + + R + V EG K T+ NF D+ + ++R P
Sbjct: 20 YIYDELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 79
Query: 62 HLLKFLLREIATAGTLEGK-RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKR 120
H++++LL E+ T+G+L+G+ R+V++GRF P +++YI +YVIC C SPDT + K
Sbjct: 80 HVMQYLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYITDYVICLGCKSPDTILXKE 139
Query: 121 DRFYFLKCEACGAETPI 137
+ +FL+CE CG++ +
Sbjct: 140 NXLFFLRCEKCGSQRSV 156
>gb|AAK42529.1| Translation initiation factor 2, beta subunit (eif2B) [Sulfolobus
solfataricus]
Length = 139
Score = 95.2 bits (233), Expect = 3e-19
Identities = 44/135 (32%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Query: 7 DYEKLLEKAYEELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIAEALNRDPQHLLKF 66
+Y ++L++ Y +LPE + ++ +P ++ GN TII NF + + + R+ + +K+
Sbjct: 6 EYVEMLDRLYSKLPEKGRKEGTQ-SLPNMIILNIGNTTIIRNFAEYCDRIRREDKICMKY 64
Query: 67 LLREIATAGTLEGK-RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKRDRFYF 125
LL+E+A G ++ K +V+QG+F+ +I +++++K YV C C S DT + K + ++
Sbjct: 65 LLKELAAPGNVDDKGELVIQGKFSSQVINTLMERFLKAYVECSTCKSLDTILKKEKKSWY 124
Query: 126 LKCEACGAETPIQHL 140
+ C ACGA+TP++ L
Sbjct: 125 IVCLACGAQTPVKPL 139
>gi|6325018 beta subunit of translation initiation factor eIF-2; Sui3p
[Saccharomyces cerevisiae]
>gi|124205|sp|P09064|IF2B_YEAST EUKARYOTIC TRANSLATION
INITIATION FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
>gi|320774|pir||S29368 translation initiation factor
eIF-2 beta chain - yeast (Saccharomyces cerevisiae)
>gi|171450|gb|AAA34589.1| (M21813) translation
initiation factor elF2 beta-subunit [Saccharomyces
cerevisiae] >gi|1061252|emb|CAA91607.1| (Z67751) SUI3
[Saccharomyces cerevisiae] >gi|1370491|emb|CAA97959.1|
(Z73594) ORF YPL237w [Saccharomyces cerevisiae]
Length = 285
Score = 93.6 bits (229), Expect = 9e-19
Identities = 41/115 (35%), Positives = 76/115 (65%), Gaps = 3/115 (2%)
Query: 29 RFEVPGALVTIEGNKTIIENFKDIAEALNRDPQHLLKFLLREIATAGTLEG-KRVVLQGR 87
+F +P + +G KTI N +DIAE L+R P+HL+++L E+ T+G+++G KR+V++G+
Sbjct: 157 KFRIPPPVCLRDGKKTIFSNIQDIAEKLHRSPEHLIQYLFAELGTSGSVDGQKRLVIKGK 216
Query: 88 FTPYLIANKIKKYIKEYVICPVCGSPDTKIIKR--DRFYFLKCEACGAETPIQHL 140
F + N +++YI EYV C C S +T++ + +R +F+ C++CG+ + +
Sbjct: 217 FQSKQMENVLRRYILEYVTCKTCKSINTELKREQSNRLFFMVCKSCGSTRSVSSI 271
>sp|Q21230|IF2B_CAEEL PUTATIVE EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT
(EIF-2-BETA) >gi|7505288|pir||T20242 hypothetical
protein K04G2.1 - Caenorhabditis elegans
>gi|3875263|emb|CAA99824.1| (Z75533) contains similarity
to Pfam domain: PF01873 (Domain found in IF2B/IF5),
Score=258.8, E-value=2.3e-74, N=1~cDNA EST CEMSD33F
comes from this gene~cDNA EST yk628h12.3 comes from this
gene~cDNA EST yk628h12.5 comes from this gene~cDNA EST
yk210c1> >gi|3878271|emb|CAB00049.1| (Z75712) contains
similarity to Pfam domain: PF01873 (Domain found in
IF2B/IF5), Score=258.8, E-value=2.3e-74, N=1~cDNA EST
CEMSD33F comes from this gene~cDNA EST yk628h12.3 comes
from this gene~cDNA EST yk628h12.5 comes from this
gene~cDNA EST yk210c1>
Length = 250
Score = 88.9 bits (217), Expect = 2e-17
Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Query: 6 YDYEKLLEKAYEELPE---NVKHHKSRFEVPGALVTIEGNK-TIIENFKDIAEALNRDPQ 61
Y YE+ L Y+ + + + K +F + V G+K T NF +I + R +
Sbjct: 87 YTYEEALTLVYQVMKDKNPDFAGDKKKFAIKLPEVARAGSKKTAFSNFLEICRLMKRQDK 146
Query: 62 HLLKFLLREIATAGTLEGKR-VVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKR 120
H+L+FLL E+ T G+++G ++++GR+ + ++KYIKEYV+C C SP+T++ K
Sbjct: 147 HVLQFLLAELGTTGSIDGSNCLIVKGRWQQKQFESVLRKYIKEYVMCHTCKSPETQLTKD 206
Query: 121 DRFYFLKCEACGAETPI 137
R +FL+C CG+ +
Sbjct: 207 TRLFFLQCTNCGSRCSV 223
>gb|AAF21202.1|AC013483_26 (AC013483) putative eukaryotic translation initiation factor 2 beta
subunit (EIF-2-BETA) [Arabidopsis thaliana]
Length = 169
Score = 72.6 bits (175), Expect = 2e-12
Identities = 33/87 (37%), Positives = 56/87 (63%), Gaps = 1/87 (1%)
Query: 43 KTIIENFKDIAEALNRDPQHLLKFLLREIATAGTLEGK-RVVLQGRFTPYLIANKIKKYI 101
KT+ NF D + ++R+P H++ FLL E+ T G L+ + R+V++GRFT + ++ YI
Sbjct: 59 KTVFVNFMDYCKTMHRNPDHVMAFLLAELGTRGKLDDQQRLVVRGRFTQRDFESLLRGYI 118
Query: 102 KEYVICPVCGSPDTKIIKRDRFYFLKC 128
+YV+C C S + + K +R +FL+C
Sbjct: 119 LDYVMCIPCKSTEAILSKENRLFFLRC 145
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.141 0.417
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54594110
Number of Sequences: 2977
Number of extensions: 2068869
Number of successful extensions: 6406
Number of sequences better than 1.0e-10: 22
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 6379
Number of HSP's gapped (non-prelim): 22
length of query: 140
length of database: 189,106,746
effective HSP length: 51
effective length of query: 89
effective length of database: 158,583,909
effective search space: 14113967901
effective search space used: 14113967901
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 161 (67.1 bits)