BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0967 (PAB0967) DE:Hypothetical protein
(452 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75058 hypothetical protein PAB0967 - Pyrococcus abyssi (st... 902 0.0
pir||A71174 hypothetical protein PH0589 - Pyrococcus horikoshii ... 708 0.0
gb|AAD48401.1|AF127910_1 (AF127910) glucokinase [Pyrococcus furi... 624 e-178
pir||C64500 hypothetical protein MJ1604 - Methanococcus jannasch... 233 2e-60
gb|AAF97356.1| (AY005811) ADP-dependent phosphofructokinase [The... 199 4e-50
gb|AAD48400.1|AF127909_1 (AF127909) phosphofructokinase [Pyrococ... 198 1e-49
pir||E71044 hypothetical protein PH1645 - Pyrococcus horikoshii ... 195 8e-49
pir||D75170 hypothetical protein PAB2013 - Pyrococcus abyssi (st... 189 6e-47
>pir||B75058 hypothetical protein PAB0967 - Pyrococcus abyssi (strain Orsay)
>gi|5458872|emb|CAB50359.1| (AJ248287) hypothetical
protein [Pyrococcus abyssi]
Length = 452
Score = 902 bits (2305), Expect = 0.0
Identities = 452/452 (100%), Positives = 452/452 (100%)
Query: 1 MSWDEMYRDAYERVLNSIGKIKGVMLAYNTNIDAIKYLKREDLERRIEEAGKDEVLRYSD 60
MSWDEMYRDAYERVLNSIGKIKGVMLAYNTNIDAIKYLKREDLERRIEEAGKDEVLRYSD
Sbjct: 1 MSWDEMYRDAYERVLNSIGKIKGVMLAYNTNIDAIKYLKREDLERRIEEAGKDEVLRYSD 60
Query: 61 ELPKKINTIQQLLGSILWSVKRGKAAELLVEDREVRNYMRQWGWDELRMGGQVGIMANLL 120
ELPKKINTIQQLLGSILWSVKRGKAAELLVEDREVRNYMRQWGWDELRMGGQVGIMANLL
Sbjct: 61 ELPKKINTIQQLLGSILWSVKRGKAAELLVEDREVRNYMRQWGWDELRMGGQVGIMANLL 120
Query: 121 GGVYGIPVIAHVPQISKLQASLFLDGPIYVPTFEEGLKLVHPRNFEGNEEDCIHYIYEFP 180
GGVYGIPVIAHVPQISKLQASLFLDGPIYVPTFEEGLKLVHPRNFEGNEEDCIHYIYEFP
Sbjct: 121 GGVYGIPVIAHVPQISKLQASLFLDGPIYVPTFEEGLKLVHPRNFEGNEEDCIHYIYEFP 180
Query: 181 RGFKVLNFTAPRENRFIGAADDYNPRLYIRKEWVERFEEIAERAELAIVSGLHSLTEETY 240
RGFKVLNFTAPRENRFIGAADDYNPRLYIRKEWVERFEEIAERAELAIVSGLHSLTEETY
Sbjct: 181 RGFKVLNFTAPRENRFIGAADDYNPRLYIRKEWVERFEEIAERAELAIVSGLHSLTEETY 240
Query: 241 REPIKVVREHLKVLKDLNIKTHLEFAFTADEKVRREILGLLSLVYSVGLNEVELASVLEI 300
REPIKVVREHLKVLKDLNIKTHLEFAFTADEKVRREILGLLSLVYSVGLNEVELASVLEI
Sbjct: 241 REPIKVVREHLKVLKDLNIKTHLEFAFTADEKVRREILGLLSLVYSVGLNEVELASVLEI 300
Query: 301 MNERELADRILAKDPADPVAVIEGLMKLIEEGVERIHFHTYGYYLAITKYRGEHVRDALL 360
MNERELADRILAKDPADPVAVIEGLMKLIEEGVERIHFHTYGYYLAITKYRGEHVRDALL
Sbjct: 301 MNERELADRILAKDPADPVAVIEGLMKLIEEGVERIHFHTYGYYLAITKYRGEHVRDALL 360
Query: 361 FSALAAATKAMLGNIEKLDDLRKGLEVPIGRQGLEVYEVVKREFNVEKGIGEVGDYQIAF 420
FSALAAATKAMLGNIEKLDDLRKGLEVPIGRQGLEVYEVVKREFNVEKGIGEVGDYQIAF
Sbjct: 361 FSALAAATKAMLGNIEKLDDLRKGLEVPIGRQGLEVYEVVKREFNVEKGIGEVGDYQIAF 420
Query: 421 VPTKIVEKPKSTVGIGDTISSSAFVSEFSLSS 452
VPTKIVEKPKSTVGIGDTISSSAFVSEFSLSS
Sbjct: 421 VPTKIVEKPKSTVGIGDTISSSAFVSEFSLSS 452
>pir||A71174 hypothetical protein PH0589 - Pyrococcus horikoshii
>gi|3256995|dbj|BAA29678.1| (AP000002) 457aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 457
Score = 708 bits (1807), Expect = 0.0
Identities = 342/451 (75%), Positives = 402/451 (88%), Gaps = 2/451 (0%)
Query: 2 SWDEMYRDAYERVLNSIGKIKGVMLAYNTNIDAIKYLKREDLERRIEEAGKDEVLRYSDE 61
+W+ +Y A ++V SI K++GV+LAYNTNIDAIKYLKREDLE+RIE+ GK+EVLRYS+E
Sbjct: 6 NWESLYEKALDKVEASIRKVRGVLLAYNTNIDAIKYLKREDLEKRIEKVGKEEVLRYSEE 65
Query: 62 LPKKINTIQQLLGSILWSVKRGKAAELLVEDREVRNYMRQWGWDELRMGGQVGIMANLLG 121
LPK+I TI QLLGSILWS+KRGKAAELLV REVR YMR+WGWDELRMGGQVGIMANLLG
Sbjct: 66 LPKEIETIPQLLGSILWSIKRGKAAELLVVSREVREYMRKWGWDELRMGGQVGIMANLLG 125
Query: 122 GVYGIPVIAHVPQISKLQASLFLDGPIYVPTFEEG-LKLVHPRNFEGNEEDCIHYIYEFP 180
GVYGIPVIAHVPQ+S+LQASLFLDGPIYVPTFE G L+L+HPR F EEDCIHYIYEFP
Sbjct: 126 GVYGIPVIAHVPQLSELQASLFLDGPIYVPTFERGELRLIHPREFRKGEEDCIHYIYEFP 185
Query: 181 RGFKVLNFTAPRENRFIGAADDYNPRLYIRKEWVERFEEIAERAELAIVSGLHSLTEETY 240
R FKVL+F APRENRFIGAADDYNP LY+R+EW+ERFEEIA+R+ELAI+SGLH LT+E +
Sbjct: 186 RNFKVLDFEAPRENRFIGAADDYNPILYVREEWIERFEEIAKRSELAIISGLHPLTQENH 245
Query: 241 REPIKVVREHLKVLKDLNIKTHLEFAFTADEKVRREILGLLSLVYSVGLNEVELASVLEI 300
+PIK+VREHLK+L DL I+ HLEFAFT DE VR EI+ LL YSVGLNEVELASV+ +
Sbjct: 246 GKPIKLVREHLKILNDLGIRAHLEFAFTPDEVVRLEIVKLLKHFYSVGLNEVELASVVSV 305
Query: 301 MNERELADRILAKDPADPVAVIEGLMKLIEE-GVERIHFHTYGYYLAITKYRGEHVRDAL 359
M E+ELA+RI++KDPADP+AVIEGL+KLI+E GV+RIHFHTYGYYLA+T+ +GEHVRDAL
Sbjct: 306 MGEKELAERIISKDPADPIAVIEGLLKLIKETGVKRIHFHTYGYYLALTREKGEHVRDAL 365
Query: 360 LFSALAAATKAMLGNIEKLDDLRKGLEVPIGRQGLEVYEVVKREFNVEKGIGEVGDYQIA 419
LFSALAAATKAM GNIEKL D+R+GL VPIG QGLEV +++++EF++ GIG + DYQ+
Sbjct: 366 LFSALAAATKAMKGNIEKLSDIREGLAVPIGEQGLEVEKILEKEFSLRDGIGSIEDYQLT 425
Query: 420 FVPTKIVEKPKSTVGIGDTISSSAFVSEFSL 450
F+PTK+V+KPKSTVGIGDTISSSAFVSEFSL
Sbjct: 426 FIPTKVVKKPKSTVGIGDTISSSAFVSEFSL 456
>gb|AAD48401.1|AF127910_1 (AF127910) glucokinase [Pyrococcus furiosus]
Length = 455
Score = 624 bits (1591), Expect = e-178
Identities = 292/452 (64%), Positives = 375/452 (82%), Gaps = 2/452 (0%)
Query: 2 SWDEMYRDAYERVLNSIGKIKGVMLAYNTNIDAIKYLKREDLERRIEEAGKDEVLRYSDE 61
+W+E+Y++A E+ + S+ K+KGV+L YNTNIDAIKYL +DLE RI +AGK+EV++YS+E
Sbjct: 3 TWEELYKNAIEKAIKSVPKVKGVLLGYNTNIDAIKYLDSKDLEERIIKAGKEEVIKYSEE 62
Query: 62 LPKKINTIQQLLGSILWSVKRGKAAELLVEDREVRNYMRQWGWDELRMGGQVGIMANLLG 121
LP KINT+ QLLGSILWS++RGKAAEL VE VR YM++WGW+ELRMGGQ GIMANLLG
Sbjct: 63 LPDKINTVSQLLGSILWSIRRGKAAELFVESCPVRFYMKRWGWNELRMGGQAGIMANLLG 122
Query: 122 GVYGIPVIAHVPQISKLQASLFLDGPIYVPTFEEG-LKLVHPRNFEGNEEDCIHYIYEFP 180
GVYG+PVI HVPQ+S+LQA+LFLDGPIYVPT E G +KL+HP+ F G+EE+CIHYIYEFP
Sbjct: 123 GVYGVPVIVHVPQLSRLQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIYEFP 182
Query: 181 RGFKVLNFTAPRENRFIGAADDYNPRLYIRKEWVERFEEIAERAELAIVSGLHSLTEETY 240
RGF+V F APRENRFIG+ADDYN L+IR+E+ E F E+ + +LAI+SGL +LT+E Y
Sbjct: 183 RGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENY 242
Query: 241 REPIKVVREHLKVLKDLNIKTHLEFAFTADEKVRREILGLLSLVYSVGLNEVELASVLEI 300
+EP ++V+ +L+VL + I HLEFAFT DEKVR EIL +L + YSVGLNEVELAS++EI
Sbjct: 243 KEPFEIVKSNLEVLNEREIPVHLEFAFTPDEKVREEILNVLGMFYSVGLNEVELASIMEI 302
Query: 301 MNERELADRILAKDPADPVAVIEGLMKLIEE-GVERIHFHTYGYYLAITKYRGEHVRDAL 359
+ E++LA +LA DP DP+AV E ++KL ++ GV+RIHFHTYGYYLA+T+Y+GEHVRDAL
Sbjct: 303 LGEKKLAKELLAHDPVDPIAVTEAMLKLAKKTGVKRIHFHTYGYYLALTEYKGEHVRDAL 362
Query: 360 LFSALAAATKAMLGNIEKLDDLRKGLEVPIGRQGLEVYEVVKREFNVEKGIGEVGDYQIA 419
LF+ALAAA KAM GNI L+++R+ VP+ + +V E ++ E+ +++GIGEV YQIA
Sbjct: 363 LFAALAAAAKAMKGNITSLEEIREATSVPVNEKATQVEEKLRAEYGIKEGIGEVEGYQIA 422
Query: 420 FVPTKIVEKPKSTVGIGDTISSSAFVSEFSLS 451
F+PTKIV KPKSTVGIGDTISSSAF+ EFS +
Sbjct: 423 FIPTKIVAKPKSTVGIGDTISSSAFIGEFSFT 454
>pir||C64500 hypothetical protein MJ1604 - Methanococcus jannaschii
>gi|1500501|gb|AAB99627.1| (U67600) M. jannaschii
predicted coding region MJ1604 [Methanococcus
jannaschii]
Length = 462
Score = 233 bits (589), Expect = 2e-60
Identities = 164/455 (36%), Positives = 261/455 (57%), Gaps = 32/455 (7%)
Query: 18 IGKIKGVML--AYNTNIDAIKYLKREDLERRIEEAGKDEVLRYSDELPKKINTIQQLLGS 75
I IKG L AYNTN+DAIKYLK ED+++ ++E +++ +E P+ I +
Sbjct: 11 IETIKGTKLFTAYNTNVDAIKYLKDEDVQKLVDEFNHKDIIERMEEYPRIIEEPLDFVAR 70
Query: 76 ILWSVKRGKAAEL-LVEDREVRNYMRQWGWDELRMGGQVGIMANLLGGVYGIPVIAHVPQ 134
++ S+K GK AE+ + +D+++ + + +DE RMGGQ GI++NL+ + +I + P
Sbjct: 71 LVHSIKTGKPAEVPIKDDKKLHEWFDRIKYDEERMGGQAGIVSNLMATLQIDKIIVYTPF 130
Query: 135 ISKLQASLFLD-GPIYVPTFEEG-LKLVHPRNFEGNEEDCIHYIYEFPRGFKV-LN---F 188
+SK QA +F+D + P E G L L R ++ I+ I+EF +G K LN
Sbjct: 131 LSKKQAEMFVDYDNLLYPLVENGNLVLKKVREAYRDDPIKINRIFEFKKGLKFKLNGEEI 190
Query: 189 TAPRENRFIGAADDYNPRLYIRKEWVERFEEIAERAELAIVSGLHSLTEE-----TYREP 243
TA + RFI A+ R+ I+ + + +I E + A +SG ++ EE T +
Sbjct: 191 TAKQSTRFIVASRPEALRIEIKDDVRKFLPKIGEAVDCAFLSGYQAIKEEYRDGKTAKYY 250
Query: 244 IKVVREHLKVL-KDLNIKTHLEFAFTADEKVRREILG-LLSLVYSVGLNEVELASVLEIM 301
+ E +K+L K+ NIKTHLEFA ++ ++R+ ++ +LS V SVG++E E+A+VL I+
Sbjct: 251 FERAEEDIKLLKKNKNIKTHLEFASISNIEIRKMVVDYILSNVESVGMDETEIANVLHIL 310
Query: 302 NERELADRILAKDPADPVAVIEGLMKLIE--EGVERIHFHTYGYYLAITK----YRGEHV 355
EL++ IL + VIEG L++ + +E + HT Y L + + E +
Sbjct: 311 GYDELSNNILKDSFIED--VIEGAKILLDKFKNLEVVQVHTIYYILFVCRADNPLSKEEL 368
Query: 356 RDALLFSALAAATKAMLGNIEKLDDLRKGLEVPIGRQGLEVYEVVKREFNVEKGIGEVGD 415
+ L FS + A+TKA LGNI +DDL +GL++P + G ++ + + +FN +
Sbjct: 369 EECLEFSTILASTKAKLGNIRAIDDLHEGLKIPHNKYG-DLLKEIAEKFN-------DNN 420
Query: 416 YQIAFVPTKIVEKPKSTVGIGDTISSSAFVSEFSL 450
Y+IA P++ VEKPKSTVG+GDTISS AFV SL
Sbjct: 421 YKIALSPSRYVEKPKSTVGLGDTISSGAFVYYVSL 455
>gb|AAF97356.1| (AY005811) ADP-dependent phosphofructokinase [Thermococcus
zilligii]
Length = 461
Score = 199 bits (502), Expect = 4e-50
Identities = 144/446 (32%), Positives = 233/446 (51%), Gaps = 24/446 (5%)
Query: 24 VMLAYNTNIDAIKYLKREDLERRIEEAGKDEVLRYSDELPKKINTIQQLLGSILWSVKRG 83
+ AYNTN+DAI YL E ++R I+E G D V + ++ P++IN + ++ ++K G
Sbjct: 14 IYTAYNTNVDAIVYLNGETVQRLIDEFGADAVRKRMEDYPREINEPLDFVARLVHALKTG 73
Query: 84 KAAELLVEDREVRNYM-RQWGWDELRMGGQVGIMANLLGGVYGIPVIAHVPQISKLQASL 142
K + + + E+ + + +D RMGGQ GI+ANLL + VI + P ++K QA +
Sbjct: 74 KPMAVPLVNEELHTWFDSHFRYDVERMGGQAGIIANLLSNLDFREVIVYTPHLAKRQAEM 133
Query: 143 FLDGP-IYVPTFEEG-LKLVHP-RNFEGNEEDCIHYIYEFPRG--FKV--LNFTAPRENR 195
F+ P ++ P E G L L HP + + ++ I+EF G FK+ P R
Sbjct: 134 FVRKPNLFYPVVEGGRLVLKHPWEAYREGDPVKVNRIFEFRAGTAFKLGDERIVVPFSGR 193
Query: 196 FIGAADDYNPRLYIRKEWVERFEEIAERAELAIVSGLHSLT-----EETYREPIKVVREH 250
FI +A + R+Y EI ER + AI+SG + + ++ +E
Sbjct: 194 FIVSARFESIRIYTEPGLRPFLPEIGERVDGAILSGYQGINLRYSDGKDANYYLRKAKED 253
Query: 251 LKVLK-DLNIKTHLEFAFTADEKVRREIL-GLLSLVYSVGLNEVELASVLEIMNERELAD 308
+ +LK + ++K HLEFA ++R++++ L L SVG++E E+A VL + ELAD
Sbjct: 254 IMLLKREKDLKVHLEFASIQSRELRKKVIYNLFPLADSVGMDEAEIAYVLSALGYDELAD 313
Query: 309 RILAKDPADPVAVIEGLMKLIEEGVERIHFHTYGYYLAIT----KYRGEHVRDALLFSAL 364
RI + + V+ G + L E ++ + HT Y + IT E +R +L +
Sbjct: 314 RIFTYNRIED-TVLGGKILLDEMNLDVLQIHTIYYIMYITHADNPLSEEELRRSLELATT 372
Query: 365 AAATKAMLGNIEKLDDLRKGLEVPIGRQGLEVYEVVKREFNVEKGIGEVGDYQIAFVPTK 424
AA++A LG+I D + GL VP +G E VK F K +Y++ +PT+
Sbjct: 373 LAASRASLGDITSPDQIEIGLRVPYNERG----EYVKLRFEEAKRKLRTKEYKLVIIPTR 428
Query: 425 IVEKPKSTVGIGDTISSSAFVSEFSL 450
+V+ P STVG+GDTIS+ AF S ++
Sbjct: 429 LVQNPVSTVGLGDTISTGAFASYLAM 454
>gb|AAD48400.1|AF127909_1 (AF127909) phosphofructokinase [Pyrococcus furiosus]
Length = 454
Score = 198 bits (498), Expect = 1e-49
Identities = 143/448 (31%), Positives = 242/448 (53%), Gaps = 27/448 (6%)
Query: 23 GVMLAYNTNIDAIKYLKREDLERRIEEAGKDEVLRYSDELPKKINTIQQLLGSILWSVKR 82
G+ AYN N+DAI L E ++R IEE G D++ R +E P++IN + ++ ++K
Sbjct: 9 GIYTAYNANVDAIVNLNAEIIQRLIEEFGPDKIKRRLEEYPREINEPLDFVARLVHALKT 68
Query: 83 GKAAELLVEDREVRNYM-RQWGWDELRMGGQVGIMANLLGGVYGIPVIAHVPQISKLQAS 141
GK + + + E+ + + + +D R+GGQ GI+AN+L G+ VIA+ P + K A
Sbjct: 69 GKPMAVPLVNEELHQWFDKTFKYDTERIGGQAGIIANILVGLKVKKVIAYTPFLPKRLAE 128
Query: 142 LFLDGPIYVPTFEEGLKLVHPRNFEGNEED--CIHYIYEFPRG--FKVLN--FTAPRENR 195
LF +G +Y P EE ++ P E D ++ I+EF +G FK+ + P R
Sbjct: 129 LFKEGILY-PVVEEDKLVLKPIQSAYREGDPLKVNRIFEFRKGTRFKLGDEVIEVPHSGR 187
Query: 196 FI-GAADDYNPRLYIRKEWVERFEEIAERAELAIVSGLHSLTEETYREP------IKVVR 248
FI + + R+ + E + EI E + AI+SG + + Y + ++ +
Sbjct: 188 FIVSSRFESISRIETKDELRKFLPEIGEMVDGAILSGYQGIRLQ-YSDGKDANYYLRRAK 246
Query: 249 EHLKVL-KDLNIKTHLEFAFTADEKVRREIL-GLLSLVYSVGLNEVELASVLEIMNEREL 306
E +++L K+ +IK H+EFA D ++R++++ + +V SVG++E E+A +L ++ +L
Sbjct: 247 EDIRLLKKNKDIKIHVEFASIQDRRLRKKVVNNIFPMVDSVGMDEAEIAYILSVLGYSDL 306
Query: 307 ADRILAKDPADPVAVIEGLMKLIEEGVERIHFHTYGYYLAIT----KYRGEHVRDALLFS 362
ADRI + + A++ G++ L E E + HT Y + IT E + +L F
Sbjct: 307 ADRIFMYNRIED-AILGGMIILDELNFEILQVHTIYYLMYITHRDNPLSEEELMRSLDFG 365
Query: 363 ALAAATKAMLGNIEKLDDLRKGLEVPIGRQGLEVYEVVKREFNVEKGIGEVGDYQIAFVP 422
+ AAT+A LG+I D++ G+ VP + E +K F K + +Y++ VP
Sbjct: 366 TILAATRASLGDINDPRDVKVGMSVPYNERS----EYIKLRFEEAKRKLRLKEYKVVIVP 421
Query: 423 TKIVEKPKSTVGIGDTISSSAFVSEFSL 450
T++V P STVG+GDTIS+ F+S SL
Sbjct: 422 TRLVPNPVSTVGLGDTISTGTFLSYLSL 449
>pir||E71044 hypothetical protein PH1645 - Pyrococcus horikoshii
>gi|3258074|dbj|BAA30757.1| (AP000006) 450aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 450
Score = 195 bits (491), Expect = 8e-49
Identities = 144/442 (32%), Positives = 229/442 (51%), Gaps = 26/442 (5%)
Query: 24 VMLAYNTNIDAIKYLKREDLERRIEEAGKDEVLRYSDELPKKINTIQQLLGSILWSVKRG 83
+ AYN NIDAI L +E ++ I DEV R +E P++IN + ++ ++K G
Sbjct: 8 IYTAYNANIDAIVKLNQETIQNLINAFDPDEVKRRIEEYPREINEPIDFVARLVHTLKLG 67
Query: 84 KAAEL-LVEDREVRNYMRQWGWDELRMGGQVGIMANLLGGVYGIPVIAHVPQISKLQASL 142
K A + LV ++ + + + ++E R+GGQ GI+AN L G+ VIA+ P + K A L
Sbjct: 68 KPAAVPLVNEKMNEWFDKTFRYEEERLGGQAGIIANTLAGLKIRKVIAYTPFLPKRLAEL 127
Query: 143 FLDGPIYVPTFEEGLKLVHPRNFEGNEEDC--IHYIYEFPRGFKVL----NFTAPRENRF 196
F G +Y P E G P E D I+ I+EF +G K P RF
Sbjct: 128 FKKGVLY-PVVENGELQFKPIQEAYREGDPLKINRIFEFRKGLKFKLGDETIEIPNSGRF 186
Query: 197 IGAAD-DYNPRLYIRKEWVERFEEIAERAELAIVSGLHSLTEETYREP------IKVVRE 249
I +A + R+ R++ EI + + AI SG L + Y + ++ +E
Sbjct: 187 IVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRTK-YSDGKDANYYLRRAKE 245
Query: 250 HLKVLKDLNIKTHLEFAFTADEKVRREIL-GLLSLVYSVGLNEVELASVLEIMNERELAD 308
+ K+ ++K H+EFA D K+R++I+ +L V SVG++E E+A +L ++ RELAD
Sbjct: 246 DIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIAQILSVLGYRELAD 305
Query: 309 RILAKDPADPVAVIEGLMKLIEEGVERIHFHTYGYYLAITKYRG----EHVRDALLFSAL 364
RI + + +++ G++ L E E + HT Y + IT E + +L F
Sbjct: 306 RIFTYNRLED-SILGGMIILDELNFEILQVHTTYYLMYITHRDNPLSEEELAKSLEFGTT 364
Query: 365 AAATKAMLGNIEKLDDLRKGLEVPIGRQGLEVYEVVKREFNVEKGIGEVGDYQIAFVPTK 424
AA +A LG+I DD + GL+VP + E VK F K + +Y++ +PT+
Sbjct: 365 LAAARASLGDIRGPDDYKVGLKVPFNERS----EYVKLRFEEAKSRLRMREYKVVVIPTR 420
Query: 425 IVEKPKSTVGIGDTISSSAFVS 446
+V+ P TVG+GDTIS+ AF++
Sbjct: 421 LVQNPVLTVGLGDTISAGAFLT 442
>pir||D75170 hypothetical protein PAB2013 - Pyrococcus abyssi (strain Orsay)
>gi|5457953|emb|CAB49443.1| (AJ248284) hypothetical
protein [Pyrococcus abyssi]
Length = 451
Score = 189 bits (475), Expect = 6e-47
Identities = 137/449 (30%), Positives = 237/449 (52%), Gaps = 26/449 (5%)
Query: 17 SIGKIKGVMLAYNTNIDAIKYLKREDLERRIEEAGKDEVLRYSDELPKKINTIQQLLGSI 76
S+ + + AYN N+DAI L E +++ I E G+ E+ +E P++I + +
Sbjct: 2 SVPQDVSIFTAYNANVDAITKLNGETIQKLINEFGEKEIAERIEEYPREIREPIDFVARL 61
Query: 77 LWSVKRGKAAELLVEDREVRNYM-RQWGWDELRMGGQVGIMANLLGGVYGIPVIAHVPQI 135
+ +++ GK + + D + ++ ++ ++ R+GGQ GI+AN+L G+ VIA+ P +
Sbjct: 62 IHALRLGKPTAVPLVDESLNSWFDEKFEYELERLGGQAGIIANVLAGLGIKKVIAYTPFL 121
Query: 136 SKLQASLFLDGPIYVPTFEEGLKLVHPRNFEGNEEDC--IHYIYEFPRG--FKVL--NFT 189
K A LF +G +Y PT E G + P +ED I+ I+EF +G FK L +
Sbjct: 122 PKRLADLFKEGVLY-PTVENGELKLKPIREAYRDEDPLKINRIFEFRKGTKFKFLGESVE 180
Query: 190 APRENRFIGAADDYNPRLYIRKEWVERF-EEIAERAELAIVSGLHSLTEETYREP----- 243
P RFI +A + KE + F ++I + + AI SG L + Y +
Sbjct: 181 VPASGRFIVSARFESISKIETKEELRPFLDDIGKEVDGAIFSGYQGLRLK-YSDGKDANY 239
Query: 244 -IKVVREHLKVLKDLNIKTHLEFAFTADEKVRREIL-GLLSLVYSVGLNEVELASVLEIM 301
++ +E + LK+ ++K H+E A D K+R++++ +L + SVG++E E+A +L ++
Sbjct: 240 YLRRAKEDIISLKEEDVKVHVELASIQDRKLRKKVITNILPIADSVGIDEAEIAQLLSVL 299
Query: 302 NERELADRILAKDPADPVAVIEGLMKLIEEGVERIHFHTYGYYLAITKYRG----EHVRD 357
R+LADRI + + +++ G++ L E E + HT Y + IT E +
Sbjct: 300 GYRDLADRIFTYNRLED-SILGGMIILDELNFEILQVHTIYYLMYITHRDNPLSEEELMK 358
Query: 358 ALLFSALAAATKAMLGNIEKLDDLRKGLEVPIGRQGLEVYEVVKREFNVEKGIGEVGDYQ 417
+L F AA +A LG+I + +D GL+VP + E VK F K + +Y+
Sbjct: 359 SLEFGTTLAAARASLGDINRPEDYEIGLKVPFNERS----EYVKLRFEEAKTKLRMREYK 414
Query: 418 IAFVPTKIVEKPKSTVGIGDTISSSAFVS 446
+ +PT++V P TVG+GDTIS+ AF++
Sbjct: 415 VVVIPTRLVPNPVLTVGLGDTISAGAFIT 443
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.140 0.397
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163479997
Number of Sequences: 2977
Number of extensions: 7068060
Number of successful extensions: 18519
Number of sequences better than 1.0e-10: 8
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 18484
Number of HSP's gapped (non-prelim): 9
length of query: 452
length of database: 189,106,746
effective HSP length: 57
effective length of query: 395
effective length of database: 154,992,987
effective search space: 61222229865
effective search space used: 61222229865
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 166 (69.1 bits)