BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0973 (PAB0973) DE:LPS BIOSYNTHESIS RFBU RELATED PROTEIN
(390 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75059 probable hexosyltransferase (EC 2.4.1.-) PAB0973 [si... 792 0.0
pir||F71196 probable hexosyltransferase (EC 2.4.1.-) PH1844 - Py... 194 1e-48
pir||A75033 probable hexosyltransferase (EC 2.4.1.-) PAB0827 [si... 151 2e-35
pir||F70346 mannosyltransferase C - Aquifex aeolicus >gi|2983151... 138 1e-31
gi|11499317 galactosyltransferase [Archaeoglobus fulgidus] >gi|7... 138 1e-31
pir||C69098 probable hexosyltransferase (EC 2.4.1.-) MTH173 - Me... 137 2e-31
pir||F64500 probable hexosyltransferase (EC 2.4.1.-) MJ1607 - Me... 137 3e-31
pir||D72511 probable hexosyltransferase (EC 2.4.1.-) APE2066 [si... 123 2e-27
pir||F70937 hypothetical protein Rv2188c - Mycobacterium tubercu... 115 9e-25
pir||S28485 lipopolysaccharide biosynthesis protein RfbV VC0259 ... 114 2e-24
emb|CAA69126.1| (Y07788) RfbV [Vibrio cholerae] 114 2e-24
emb|CAA18697.1| (AL022602) hypothetical protein MLCB268.31c [Myc... 109 4e-23
pir||S77553 probable hexosyltransferase (EC 2.4.1.-) sll1971 [si... 109 7e-23
sp|P42982|YPJH_BACSU HYPOTHETICAL 42.0 KDA PROTEIN IN DAPB-PAPS ... 108 9e-23
emb|CAB09632.1| (Z96801) hypothetical protein MLCL581.14c [Mycob... 108 9e-23
pir||T35514 probable glycosyl transferase - Streptomyces coelico... 107 3e-22
pir||C72590 probable hexosyltransferase (EC 2.4.1.-) APE1191 [si... 106 4e-22
pir||C72340 probable hexosyltransferase (EC 2.4.1.-) TM0744 - Th... 105 8e-22
dbj|BAB06024.1| (AP001515) lipopolysaccharide N-acetylglucosamin... 104 1e-21
pir||A82964 glycosyltransferase WbpZ PA5447 [imported] - Pseudom... 103 3e-21
pir||E72354 probable hexosyltransferase (EC 2.4.1.-) TM0622 - Th... 103 4e-21
gb|AAC38772.1| (AF010183) glycosyltransferase WbpZ [Pseudomonas ... 102 5e-21
dbj|BAB06407.1| (AP001516) alpha-D-mannose-alpha(1-6)phosphatidy... 102 7e-21
gb|AAA92877.1| (L38424) unknown [Bacillus subtilis] 101 1e-20
emb|CAB91117.1| (AL355913) putative glycosyl transferase [Strept... 100 4e-20
gb|AAB84956.1| (AE000829) LPS biosynthesis RfbU related protein ... 100 5e-20
pir||H69158 LPS biosynthesis RfbU related protein - Methanobacte... 100 5e-20
pir||T34839 probable hexosyltransferase (EC 2.4.1.-) SC2G5.06 [s... 99 8e-20
dbj|BAB05134.1| (AP001512) unknown conserved protein in others [... 99 8e-20
dbj|BAB07095.1| (AP001518) lipopolysaccharide biosynthesis [Baci... 98 1e-19
dbj|BAB05402.1| (AP001512) unknown conserved protein [Bacillus h... 97 3e-19
pir||F70441 capsular polysaccharide biosynthsis protein - Aquife... 95 1e-18
pir||H64446 probable hexosyltransferase (EC 2.4.1.-) MJ1178 [sim... 94 3e-18
pir||A70571 probable hexosyltransferase (EC 2.4.1.-) Rv2610c [si... 94 3e-18
pir||F69142 probable hexosyltransferase (EC 2.4.1.-) MTH332 [sim... 93 6e-18
emb|CAB70927.1| (AL137778) putative sugar transferase [Streptomy... 93 6e-18
sp|P46915|CTSA_BACSU SPORE COAT PROTEIN SA >gi|7427927|pir||A700... 91 2e-17
gb|AAC69649.1| (AF019375) GlcNAc transferase [Escherichia coli] 89 9e-17
gb|AAG18700.1| (AE004975) LPS biosynthesis protein; Lpb [Halobac... 89 9e-17
dbj|BAB07431.1| (AP001519) unknown conserved protein [Bacillus h... 89 1e-16
gb|AAC98618.1| (AF047478) mannosyltransferase; WbkA [Brucella me... 88 2e-16
pir||S74777 hypothetical protein slr1076 - Synechocystis sp. (st... 88 2e-16
dbj|BAA23228.1| (AB000126) mannosyl transferase [Klebsiella pneu... 88 2e-16
emb|CAB50741.1| (AJ243803) putative glycosyl transferase [Strept... 88 2e-16
pir||C70036 capsular polysaccharide biosynthesis homolog yveN - ... 87 3e-16
pir||I76777 Mannosyltransferase (EC 5.-.-.-) C - Escherichia col... 87 3e-16
dbj|BAA28303.1| (AB009326) mannosyl transferase [Escherichia coli] 87 3e-16
dbj|BAA28289.1| (AB009319) mannosyl transferase [Escherichia col... 87 4e-16
dbj|BAA28297.1| (AB009323) mannosyl transferase [Escherichia col... 87 4e-16
dbj|BAA28305.1| (AB009327) mannosyl transferase [Escherichia coli] 86 6e-16
sp|P26470|RFAK_SALTY LIPOPOLYSACCHARIDE 1,2-N-ACETYLGLUCOSAMINET... 85 1e-15
gb|AAB08106.1| (U68035) HepB [Anabaena sp.] 85 1e-15
emb|CAB57789.1| (AJ250131) HepD protein [Anabaena PCC7120] 85 1e-15
gb|AAF04385.1|AF189151_8 (AF189151) WbdC; mannosyl transferase C... 85 1e-15
pir||T40367 n-acetylglucosaminyl-phosphatidylinositol - fission ... 85 2e-15
dbj|BAB03209.1| (AB046360) putative glycosyltransferase [Actinob... 85 2e-15
gb|AAG19463.1| (AE005039) Vng1059c [Halobacterium sp. NRC-1] 85 2e-15
gb|AAK42884.1| Glycosyltransferase, putative [Sulfolobus solfata... 83 7e-15
pir||G75058 probable hexosyltransferase (EC 2.4.1.-) PAB1410 [si... 82 9e-15
gi|11498225 LPS biosynthesis protein, putative [Archaeoglobus fu... 82 2e-14
pir||T20374 hypothetical protein D2085.6 - Caenorhabditis elegan... 82 2e-14
pir||S70682 glycosyltransferase homolog - Bordetella pertussis >... 81 2e-14
gb|AAC69662.1| (AF019745) WaaD [Escherichia coli] 81 3e-14
pir||A69143 galactosyl-transferase RfpB related protein - Methan... 80 4e-14
sp|P39862|CAPM_STAAU CAPM PROTEIN >gi|506709|gb|AAA64652.1| (U10... 80 4e-14
pir||G75007 lps biosynthesis rfbu related protein PAB1301 - Pyro... 80 6e-14
pir||D70351 probable hexosyltransferase (EC 2.4.1.-) aq_572 [sim... 80 6e-14
pir||D72353 lipopolysaccharide biosynthesis protein - Thermotoga... 80 6e-14
pir||T44785 glycosyltransferase homolog [imported] - Bordetella ... 79 8e-14
pir||C72354 conserved hypothetical protein - Thermotoga maritima... 79 8e-14
pir||A75194 glycogen synthase PAB2292 - Pyrococcus abyssi (strai... 79 8e-14
gb|AAG38610.1|AF319969_1 (AF319969) mannosyl transferase [Bradyr... 79 8e-14
pir||C70859 probable hexosyltransferase (EC 2.4.1.-) Rv3032 [sim... 79 1e-13
pir||F72257 lipopolysaccharide biosynthesis protein-related prot... 79 1e-13
gb|AAD24453.1|AF118389_10 (AF118389) Cps2G [Streptococcus suis] 78 1e-13
pir||S77338 LPS glycosyltransferase icsA - Synechocystis sp. (st... 78 2e-13
pir||T46662 alpha 1,2 N-acetylglucosamine transferase [imported]... 78 2e-13
pir||H83019 probable glycosyl transferase PA5004 [imported] - Ps... 78 2e-13
pir||B71691 capm protein (capM1) RP344 - Rickettsia prowazekii >... 77 3e-13
pir||T45962 hypothetical protein F7J8.200 - Arabidopsis thaliana... 77 3e-13
dbj|BAB07099.1| (AP001518) glycosyl transferase (lipopolysacchar... 77 3e-13
pir||E71699 capm protein (capM2) RP414 - Rickettsia prowazekii >... 77 4e-13
pir||T44601 probable glycosyltransferase [imported] - Rhizobium ... 77 4e-13
emb|CAB92272.1| (AL356595) putative transferase [Streptomyces co... 77 4e-13
pir||T04103 sucrose-phosphate synthase (EC 2.4.1.14) 1 - rice >g... 76 7e-13
pir||C71154 hypothetical protein PH0434 - Pyrococcus horikoshii ... 76 7e-13
gb|AAF23992.1| (AF035937) WbpU [Pseudomonas aeruginosa] 76 7e-13
pir||D64433 hypothetical protein MJ1069 - Methanococcus jannasch... 76 9e-13
pir||C71153 hypothetical protein PH0426 - Pyrococcus horikoshii ... 76 9e-13
gb|AAD19925.1| (AF105116) putative glucosyl transferase [Strepto... 76 9e-13
pir||E81824 alpha 1,2 N-acetylglucosamine transferase NMA1959 [i... 75 1e-12
sp|Q9R9N1|LPSE_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS GLYCOS... 75 1e-12
gb|AAK42865.1| Glycosyltransferase, putative [Sulfolobus solfata... 75 2e-12
pir||S75935 hypothetical protein - Synechocystis sp. (strain PCC... 75 2e-12
gb|AAD46732.1|AF078736_12 (AF078736) putative glycosyl transfera... 75 2e-12
pir||C81053 alpha-1,2-N-acetylglucosamine transferase NMB1705 [i... 75 2e-12
emb|CAC04040.1| (AL391406) putative transferase [Streptomyces co... 75 2e-12
sp|Q43802|SPS_ORYSA SUCROSE-PHOSPHATE SYNTHASE (UDP-GLUCOSE-FRUC... 74 3e-12
pir||C71226 hypothetical protein PH0069 - Pyrococcus horikoshii ... 74 3e-12
gb|AAD46728.1|AF078736_2 (AF078736) putative glycosyl transferas... 74 3e-12
pir||E70156 lipopolysaccharide biosynthesis-related protein homo... 73 4e-12
gb|AAD28801.1| (U52844) putative glycosyltransferase [Serratia m... 73 4e-12
sp|Q48453|YC07_KLEPN HYPOTHETICAL 41.2 KD PROTEIN IN CPS REGION ... 73 6e-12
emb|CAB93438.1| (AL357591) putative glycosyl transferase [Strept... 73 6e-12
pir||A82265 probable polysaccharide biosynthesis protein VC0925 ... 73 6e-12
gb|AAG18698.1| (AE004975) LPS glycosyltransferase; Lpg [Halobact... 73 6e-12
pir||A69989 probable hexosyltransferase (EC 2.4.1.-) ytcC - Baci... 73 7e-12
gi|9755344 N-acetylglucosaminyl-phosphatidylinositol biosyntheti... 72 1e-11
pir||S51264 probable galactosyltransferase trsE - Yersinia enter... 72 1e-11
prf||1804343A SPT14 gene [Saccharomyces cerevisiae] 72 1e-11
pir||S76544 hypothetical protein - Synechocystis sp. (strain PCC... 72 1e-11
pir||S65187 GPI-anchor biosynthesis protein PIG-A - yeast (Sacch... 72 1e-11
pir||S22619 hypothetical protein 17.9 - Salmonella choleraesuis ... 71 2e-11
pir||F64175 hypothetical protein HI1698 (lsg locus) - Haemophilu... 70 4e-11
gb|AAC45156.1| (U39810) LPS glycosyltransferase IcsA [Neisseria ... 70 4e-11
pir||S74765 mannosyltransferase B - Synechocystis sp. (strain PC... 70 4e-11
gb|AAG19109.1| (AE005009) Vng0598c [Halobacterium sp. NRC-1] 70 4e-11
emb|CAC12195.1| (AL445066) N-acetylglucosaminyl-phosphatidylinos... 70 4e-11
pir||B70610 hypothetical protein Rv1212c - Mycobacterium tubercu... 70 5e-11
emb|CAB43611.1| (AJ239004) galactosyl transferase [Streptococcus... 70 5e-11
sp|Q11152|Y486_MYCTU HYPOTHETICAL 50.5 KDA PROTEIN RV0486 >gi|74... 69 6e-11
>pir||A75059 probable hexosyltransferase (EC 2.4.1.-) PAB0973 [similarity] -
Pyrococcus abyssi (strain Orsay)
>gi|5458879|emb|CAB50366.1| (AJ248287) LPS BIOSYNTHESIS
RFBU RELATED PROTEIN [Pyrococcus abyssi]
Length = 390
Score = 792 bits (2022), Expect = 0.0
Identities = 390/390 (100%), Positives = 390/390 (100%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAP 60
MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAP
Sbjct: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAP 60
Query: 61 HFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLT 120
HFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLT
Sbjct: 61 HFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLT 120
Query: 121 YHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPP 180
YHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPP
Sbjct: 121 YHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPP 180
Query: 181 GVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDS 240
GVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDS
Sbjct: 181 GVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDS 240
Query: 241 YLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFG 300
YLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFG
Sbjct: 241 YLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFG 300
Query: 301 MVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIG 360
MVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIG
Sbjct: 301 MVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIG 360
Query: 361 KTGRRLVEREYSWDKIVEKTEIALKAIVNH 390
KTGRRLVEREYSWDKIVEKTEIALKAIVNH
Sbjct: 361 KTGRRLVEREYSWDKIVEKTEIALKAIVNH 390
>pir||F71196 probable hexosyltransferase (EC 2.4.1.-) PH1844 - Pyrococcus
horikoshii >gi|3258282|dbj|BAA30965.1| (AP000007) 381aa
long hypothetical protein [Pyrococcus horikoshii]
Length = 381
Score = 194 bits (489), Expect = 1e-48
Identities = 132/387 (34%), Positives = 208/387 (53%), Gaps = 25/387 (6%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLE--GIEVIRL 58
MK+ +++ ++YP+ GG+ + + +A L ERG EV ++T +R E L+ GIE+I++
Sbjct: 4 MKIALVSDWYYPKIGGVATHMHNLAIKLRERGHEVGIVTNNRPTGKEEELKRYGIELIKI 63
Query: 59 APHFIVSNTPISFNLPLKLIKVFKE--EQFSVINAHTPVPYYADVSAWVNNVLKGSNKTP 116
P I ++ LK + E + F +I++H + +S K K
Sbjct: 64 -PGIISPFLDVNLTYGLKSSEELNEFLKDFDIIHSHHA---FTPLSLKALKAGKNMEKGT 119
Query: 117 FVLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKK-KL 175
+ T+ E D + + + L + L S II S + F +
Sbjct: 120 LLTTHSISFAHESKLWDTLGF--TIPLFKSYLKYSHRIIAVSKAA---KSFIEHFTSVPV 174
Query: 176 IWIPPGVDTERYFPGKSY-RLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVA 234
+ +P GVD ER+FP + ++ + + L +V+++ M+ KG LL AF
Sbjct: 175 LIVPNGVDDERFFPARDKEKIKAKFGL--EGNVVLYVSRMSY---RKGPHVLLNAF---- 225
Query: 235 TQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTT 294
++++D+ LV+VG G+M+P K LGI +V+F GYV +DILPE +R +DV VLPS +
Sbjct: 226 SKIEDATLVMVGNGEMLPFLKAQTKFLGIENKVVFMGYVPDDILPEVFRMADVFVLPSIS 285
Query: 295 VQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDN 354
E FG+V++EA ASG P+I T+VGGI VI+ G+LVPP + +L EAI LL ++
Sbjct: 286 -SEAFGIVILEAMASGVPIIATDVGGIPEVIKENSAGLLVPPGNELKLREAIEKLLKNEE 344
Query: 355 LARKIGKTGRRLVEREYSWDKIVEKTE 381
L + G GRR VE +YSW+KIV K E
Sbjct: 345 LRKWYGNNGRRSVEEKYSWNKIVVKIE 371
>pir||A75033 probable hexosyltransferase (EC 2.4.1.-) PAB0827 [similarity] -
Pyrococcus abyssi (strain Orsay)
>gi|5458671|emb|CAB50158.1| (AJ248287)
GALACTOSYLTRANSFERASE or LPS BIOSYNTHESIS RFBU RELATED
PROTEIN [Pyrococcus abyssi]
Length = 371
Score = 151 bits (377), Expect = 2e-35
Identities = 119/385 (30%), Positives = 194/385 (49%), Gaps = 35/385 (9%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLE--GIEVIRL 58
+K+ +++ +++P+ GG+ + + +A L + G EV ++T + L+ GI++I++
Sbjct: 4 LKIALVSDWYFPKIGGVAIHVHNLAIHLRKMGHEVSIVTNALTNGKEGELQKYGIDLIKV 63
Query: 59 APHFIVSNTPISFNLPLKLIKVFKEEQFSVINA-HTPVPYYADVSAWVNNVLKGSNKTPF 117
P I +S V + F V++A H P N V + T
Sbjct: 64 -PGLIKDGINLSMIAKSSNSLVEYLKGFDVVHAQHAFTPLSLKSIPAGNKVGALTLVTNH 122
Query: 118 VLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKK-LI 176
+ + N + GF K++Y Y + G + + + S LR+F ++
Sbjct: 123 SVEFENFSILNGF--SKMSYSY-FKMYLGQVKVGIGVSKASV------SFLRKFTNAPIV 173
Query: 177 WIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQ 236
IP GV+ ER F G+ + ++++G + KGV YL+ A K+V
Sbjct: 174 EIPNGVNIER-FNGRGREW--------GTRNILYVGRLE---PRKGVNYLISAMKFV--- 218
Query: 237 VKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQ 296
+ L +VG G M K LG+ +V F G++ ++ L Y+ S+V VLPS +
Sbjct: 219 --EGKLTIVGDGSMRKVLKMQAKKLGVEDKVEFLGFISQEELILLYKKSEVFVLPS--LS 274
Query: 297 EGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLA 356
E FG+VL+EA AS PVIGT+VGGI +I G GI+VPP+D LA AI +L++ A
Sbjct: 275 EAFGIVLLEAMASEVPVIGTSVGGIPEII--GDAGIIVPPRDSKALANAINAILSNQKTA 332
Query: 357 RKIGKTGRRLVEREYSWDKIVEKTE 381
+++GK GR+ VER YSWD + E+TE
Sbjct: 333 KRLGKLGRKRVERLYSWDVVAERTE 357
>pir||F70346 mannosyltransferase C - Aquifex aeolicus >gi|2983151|gb|AAC06753.1|
(AE000693) mannosyltransferase C [Aquifex aeolicus]
Length = 368
Score = 138 bits (343), Expect = 1e-31
Identities = 115/396 (29%), Positives = 193/396 (48%), Gaps = 39/396 (9%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAP 60
MK+L + P GG+E ++Y + L +G + ++ + + + G
Sbjct: 1 MKVLHLGKLCPPNEGGIEVFSYDLLEYLNSKGIKADLLCFGNRTFN-DAYRGFNFFSCKM 59
Query: 61 HFIVSNTPISFNLPLKLIKVFK--EEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFV 118
+ +++ P+S++ +K FK E+ + +I+ H+P P + +L + V
Sbjct: 60 NVKLNSAPLSYDF----VKTFKKIEKNYDIIHVHSPNP--------LAEILSLFSHKKVV 107
Query: 119 LTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWI 178
+H+D+V++ F Y + Q L + II SP SK L F+ K + I
Sbjct: 108 AHWHSDIVRQKF-----TYFFYKPFQHMYLKKAIRIICTSPQYLQTSKQLEGFRNKAVVI 162
Query: 179 PPGVDTER----YFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVA 234
P G++ +R Y K + N R KIV+ IG + +KG YL++A KY+
Sbjct: 163 PLGLNPKRLMSDYVDEKFKDFIELKNKGR--KIVLSIGRLVE---YKGYKYLIEAAKYIN 217
Query: 235 TQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTT 294
+ +V+ G G + ++ +L + ++V G + L + ++ DV LPS T
Sbjct: 218 NNIS---IVIAGSGPLFQSLEEKIETLNLKEKVFLFGRINNVSL--YMKNCDVFCLPSIT 272
Query: 295 VQEGFGMVLIEAGASGKPVIGTNV--GGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTD 352
E FG+VL+EA GKP+I T+V GI +V +NG TG++V PKDP LAEAI +L +
Sbjct: 273 RNEAFGLVLVEALYFGKPLITTDVEGSGISYVNQNGITGLVVKPKDPKALAEAINKILKN 332
Query: 353 DNLARKIGKTG-RRLVEREYS--WDKIVEKTEIALK 385
+NL ++ + +R E E S DKI+ E LK
Sbjct: 333 ENLYKQFSENAKKRFKEFEISNIGDKILNLYEEVLK 368
>gi|11499317 galactosyltransferase [Archaeoglobus fulgidus]
>gi|7433881|pir||G69465 probable hexosyltransferase (EC
2.4.1.-) AF1728 - Archaeoglobus fulgidus
>gi|2648819|gb|AAB89517.1| (AE000983)
galactosyltransferase [Archaeoglobus fulgidus]
Length = 356
Score = 138 bits (343), Expect = 1e-31
Identities = 110/387 (28%), Positives = 195/387 (49%), Gaps = 50/387 (12%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAP 60
MK+++++ YF P GG+E + IA L RG+EV V+T++ G + P
Sbjct: 1 MKVVLLSSYFPPHIGGVEVHVERIAHHLHRRGFEVVVVTSTASGREKFPFR----VEYVP 56
Query: 61 HFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLT 120
+ +PI+ L L K+ + + ++HTP P+++ K+P V+T
Sbjct: 57 SIPIPYSPITPFLGRFLEKIDGD----IFHSHTPPPFFSC----------SLRKSPHVIT 102
Query: 121 YHNDLV---KEG-FPLDKVAYLYNLSLQRGLLLLSDTI-----ITPSPYCYYESKLLRRF 171
YH D+ K G FP+ + L L ++R +LS+ + I + Y E+ L
Sbjct: 103 YHCDIEIPEKYGRFPIPRA--LSKLIIRRTDDMLSEALDRADAIVATTKSYAETSRLLAG 160
Query: 172 KKKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFK 231
+ + IP G++ + ++ + V+F+G + A KGV LLKA K
Sbjct: 161 RDYHV-IPNGIELSEFEGVEAEK----------EPTVLFLGRLA---ATKGVDVLLKAMK 206
Query: 232 YVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLP 291
+V + + V++G G+ +++ L ++ FTG++ + E+ + ++VLP
Sbjct: 207 HVDVEAR---CVIIGDGEERSSLERLARELEVNAE--FTGFLPRKKVIEYLSRASLLVLP 261
Query: 292 STTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLT 351
S + E FG+VL+EA A G PV +++ G++ V + G + PP D RL+E I +L+
Sbjct: 262 SLSRLEAFGIVLLEAMACGTPVAASDLPGVRDVAS--EAGFVFPPGDYMRLSEIINEVLS 319
Query: 352 DDNLARKIGKTGRRLVEREYSWDKIVE 378
D+ + IG++GRR+V +YSWD +V+
Sbjct: 320 DERKVKAIGESGRRIVREKYSWDVVVK 346
>pir||C69098 probable hexosyltransferase (EC 2.4.1.-) MTH173 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621216|gb|AAB84679.1| (AE000805) LPS biosynthesis
RfbU related protein [Methanobacterium
thermoautotrophicum]
Length = 382
Score = 137 bits (342), Expect = 2e-31
Identities = 124/402 (30%), Positives = 187/402 (45%), Gaps = 43/402 (10%)
Query: 1 MKLLMITPYFYPE--GGGLEKYAYMIARGLVERGWEVKVITASRKG-NSLENLEGIEVIR 57
M++L+++ +F P GGG +Y + IAR LVERG V VI+ G E + G+ V
Sbjct: 4 MRILIVSDFFVPHYNGGGERRY-FEIARRLVERGHVVDVISMGIHGVGEYEEVSGVRVHH 62
Query: 58 LAPHFIVSNTPISFNLPLKLIKVFKE-------EQFSVINAHTPVPYYADVSAWVNNVLK 110
L P + P+ PL I+ + +I+A T P + A++ + +
Sbjct: 63 LGPR--IRKPPLRG--PLDFIRFMAAAFRWVMTHDYDIIDAQTYAPL---LPAFLASRIH 115
Query: 111 GSNKTPFVLTYHNDLVKEG---FPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYE-SK 166
G TP V T H+ G K A + L R L D +IT S ++
Sbjct: 116 G---TPMVATIHDVSSAHGDQWLQSSKTATILERVLMR---LPYDGVITVSRSTASALTE 169
Query: 167 LLRRFKKKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYL 226
L R + IP GVD E + S+ P + ++F+G + HK V +L
Sbjct: 170 LHGRNPDGIHIIPNGVDPEL--------IDSV--TPATGNYIIFVGRLA---PHKHVDHL 216
Query: 227 LKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSD 286
++ F + D L ++G G K M GI V F + + R +
Sbjct: 217 IEVFSKLVIDFPDLRLEIIGDGVERARLKAMVDECGIRDSVTFHHNLSYPEVISRIRGAR 276
Query: 287 VIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAI 346
V+VLPST +EGFGMVL EAGA G P + GG+ VI++G+ G LV P D L + I
Sbjct: 277 VLVLPST--REGFGMVLAEAGACGVPAVAYRSGGVVEVIDDGENGFLVEPCDKEALHDKI 334
Query: 347 VTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTEIALKAIV 388
L++DD L ++G GR+ VE E+ WD++V++ E I+
Sbjct: 335 KLLISDDELRDRMGSQGRKKVEEEFIWDRVVDEVERTYSFII 376
>pir||F64500 probable hexosyltransferase (EC 2.4.1.-) MJ1607 - Methanococcus
jannaschii >gi|1500505|gb|AAB99629.1| (U67601) LPS
biosynthesis protein, putative [Methanococcus
jannaschii]
Length = 390
Score = 137 bits (341), Expect = 3e-31
Identities = 112/394 (28%), Positives = 195/394 (49%), Gaps = 31/394 (7%)
Query: 1 MKLLMITPYFYPE-GGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLA 59
MK+ M+T + P GGL + +A GLV G EV VIT EN+ G+ V R+
Sbjct: 1 MKIAMVTWEYPPRIVGGLAIHCKGLAEGLVRNGHEVDVITVGYDLPEYENINGVNVYRVR 60
Query: 60 P----HFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKT 115
P HF+ ++ + KL + +++ VI+ H + ++ + LK +
Sbjct: 61 PISHPHFLTWAMFMAEEMEKKL-GILGVDKYDVIHCHDWMTHFVGAN------LKHICRM 113
Query: 116 PFVLTYHNDLVKE--GFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYE-SKLLRRFK 172
P+V + H+ + G D ++ +++ S +IT S E + +
Sbjct: 114 PYVQSIHSTEIGRCGGLYSDDSKAIH--AMEYLSTYESCQVITVSKSLKEEVCSIFNTPE 171
Query: 173 KKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSA------KIVMFIGTMNRGHAHKGVPYL 226
K+ I G++ + S+ N RS K+++F+G + KG+ YL
Sbjct: 172 DKVKVIYNGINPWEFDINLSWE--EKINFRRSIGVQDDEKMILFVGRLTY---QKGIEYL 226
Query: 227 LKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSD 286
++A + + ++ LV+ G GDM + +C LG+ +V+F G+V D L + Y+S+D
Sbjct: 227 IRAMPKILER-HNAKLVIAGSGDMRDYLEDLCYQLGVRHKVVFLGFVNGDTLKKLYKSAD 285
Query: 287 VIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAI 346
V+V+PS V E FG+V +EA A+G PV+ ++VGG+ +I++ GI V PK+P +A +
Sbjct: 286 VVVIPS--VYEPFGIVALEAMAAGTPVVVSSVGGLMEIIKHEVNGIWVYPKNPDSIAWGV 343
Query: 347 VTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKT 380
+L+D I ++ V +YSWD I ++T
Sbjct: 344 DRVLSDWGFREYIVNNAKKDVYEKYSWDNIAKET 377
>pir||D72511 probable hexosyltransferase (EC 2.4.1.-) APE2066 [similarity] -
Aeropyrum pernix (strain K1) >gi|5105764|dbj|BAA81076.1|
(AP000063) 392aa long hypothetical
N-acetylglucosaminyl-phosphatidylinositol biosynthetic
protein [Aeropyrum pernix]
Length = 392
Score = 123 bits (307), Expect = 2e-27
Identities = 70/201 (34%), Positives = 114/201 (55%), Gaps = 15/201 (7%)
Query: 178 IPPGVDTERYFPGKSYRLHSIYNLPRSA-KIVMFIGTMNRGHAHKGVPYLLKAFKYVATQ 236
IP GVD ER+ P + P++ +V+F+G + KG L++AF++V +
Sbjct: 191 IPNGVDVERFKP----------STPKADYPLVLFLGRLVW---RKGAHVLVRAFRHVVDE 237
Query: 237 VKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQ 296
++D+ L + G+G+ P K + G+ V G V E P Y S+ V +PS V
Sbjct: 238 IRDAKLYIGGKGEFEPIIKLLIARYGLENNVKMLGVVPESEKPSLYSSAWVTAVPSI-VN 296
Query: 297 EGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLA 356
E FG+V +E+ +SG PV+ + GG+K V+++GKTG+LV P LA+A++TLL D L
Sbjct: 297 ESFGIVALESLSSGTPVVASRQGGLKDVVKHGKTGLLVKPGSSKELAKALITLLQDSGLR 356
Query: 357 RKIGKTGRRLVEREYSWDKIV 377
+++ + R++V Y W K+V
Sbjct: 357 KRMSEEARKIVLERYDWRKVV 377
>pir||F70937 hypothetical protein Rv2188c - Mycobacterium tuberculosis (strain
H37RV) >gi|2911108|emb|CAA17492.1| (AL021957)
hypothetical protein Rv2188c [Mycobacterium
tuberculosis]
Length = 399
Score = 115 bits (285), Expect = 9e-25
Identities = 71/212 (33%), Positives = 109/212 (50%), Gaps = 11/212 (5%)
Query: 175 LIWIPPGVDTERYFPGKSYR--LHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKY 232
L ++PPGVDT+R+ P + R L Y L +V ++R KG L+ A
Sbjct: 180 LEYLPPGVDTDRFRPDPAARAELRKRYRLGERPTVVC----LSRLVPRKGQDTLVTALPS 235
Query: 233 VATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPS 292
+ +V + LV+VG G + +K+ G++ V FTG V D LP + +DV +P
Sbjct: 236 IRRRVDGAALVIVGGGPYLETLRKLAHDCGVADHVTFTGGVATDELPAHHALADVFAMPC 295
Query: 293 TTVQ-----EGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIV 347
T EG G+V +EA A+G PVI N GG +++ KTG++V + R+A+A+
Sbjct: 296 RTRGAGMDVEGLGIVFLEASAAGVPVIAGNSGGAPETVQHNKTGLVVDGRSVDRVADAVA 355
Query: 348 TLLTDDNLARKIGKTGRRLVEREYSWDKIVEK 379
LL D + A +G GR V ++ WD + K
Sbjct: 356 ELLIDRDRAVAMGAAGREWVTAQWRWDTLAAK 387
>pir||S28485 lipopolysaccharide biosynthesis protein RfbV VC0259 precursor
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|48400|emb|CAA42151.1| (X59554) possible outer
membrane protein [Vibrio cholerae]
>gi|9654668|gb|AAF93434.1| (AE004114) lipopolysaccharide
biosynthesis protein RfbV [Vibrio cholerae]
Length = 410
Score = 114 bits (282), Expect = 2e-24
Identities = 105/378 (27%), Positives = 180/378 (46%), Gaps = 34/378 (8%)
Query: 1 MKLLMITPYFYPEG-GGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLA 59
MK+L + YPE GG+E+ IA G G E K++T S S EG E+I +
Sbjct: 41 MKVLHVYRTCYPETKGGVEQVIRFIASGTKPLGIETKILTLSDNQTSSYYCEGTEIISVK 100
Query: 60 PHFIVSNTPISFNLPLKLIKVFKE--EQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPF 117
+S+ S+ KLI+ FK+ + +I+ H P P +S + + P
Sbjct: 101 KSIEISSNGFSW----KLIRQFKKLSKWADIIHYHYPWPTGDFLSLF-------GSSNPS 149
Query: 118 VLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIW 177
++TYH+D++++ + LY L+ L ++ ++ SP + S+ L R K K+
Sbjct: 150 IVTYHSDIIRQKC----LKKLYQ-PLESHFLNQANILVATSPQYAHTSENLLRHKNKVKI 204
Query: 178 IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQV 237
IP VD E +P S + + +F+G + +KG+ +LL+A K +
Sbjct: 205 IPLAVD-ENTYPIPSNDNINKWREKVGEGFFLFVGVLRY---YKGLDFLLEAAK-----I 255
Query: 238 KDSYLVLVGRGDMIPEYKKMCMSLGIS--KRVIFTGYVEEDILPEFYRSSDVIVLPSTTV 295
+++ G G PE K+ + + V G++ E+ + S V PS
Sbjct: 256 NQLPVIIAGDG---PERVKLESYIAKHNLENVKLVGFISEEDKVILHLLSKAFVFPSHLR 312
Query: 296 QEGFGMVLIEAGASGKPVIGTNVG-GIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDN 354
E FG+ LIEA K +I +++G G +V NG+TG++VPP D ++A++ + D
Sbjct: 313 SEAFGISLIEAQMYCKAIISSDIGTGSSYVNINGETGLVVPPADSQSFSDAMLKIEHDTK 372
Query: 355 LARKIGKTGRRLVEREYS 372
L K+G R+ E+E++
Sbjct: 373 LCEKLGINARKRFEQEFT 390
>emb|CAA69126.1| (Y07788) RfbV [Vibrio cholerae]
Length = 370
Score = 114 bits (282), Expect = 2e-24
Identities = 105/378 (27%), Positives = 180/378 (46%), Gaps = 34/378 (8%)
Query: 1 MKLLMITPYFYPEG-GGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLA 59
MK+L + YPE GG+E+ IA G G E K++T S S EG E+I +
Sbjct: 1 MKVLHVYRTCYPETKGGVEQVIRFIASGTKPLGIETKILTLSDNQTSSYYCEGTEIISVK 60
Query: 60 PHFIVSNTPISFNLPLKLIKVFKE--EQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPF 117
+S+ S+ KLI+ FK+ + +I+ H P P +S + + P
Sbjct: 61 KSIEISSNGFSW----KLIRQFKKLSKWADIIHYHYPWPTGDFLSLF-------GSSNPS 109
Query: 118 VLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIW 177
++TYH+D++++ + LY L+ L ++ ++ SP + S+ L R K K+
Sbjct: 110 IVTYHSDIIRQKC----LKKLYQ-PLESHFLNQANILVATSPQYAHTSENLLRHKNKVKI 164
Query: 178 IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQV 237
IP VD E +P S + + +F+G + +KG+ +LL+A K +
Sbjct: 165 IPLAVD-ENTYPIPSNDNINKWREKVGEGFFLFVGVLRY---YKGLDFLLEAAK-----I 215
Query: 238 KDSYLVLVGRGDMIPEYKKMCMSLGIS--KRVIFTGYVEEDILPEFYRSSDVIVLPSTTV 295
+++ G G PE K+ + + V G++ E+ + S V PS
Sbjct: 216 NQLPVIIAGDG---PERVKLESYIAKHNLENVKLVGFISEEDKVILHLLSKAFVFPSHLR 272
Query: 296 QEGFGMVLIEAGASGKPVIGTNVG-GIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDN 354
E FG+ LIEA K +I +++G G +V NG+TG++VPP D ++A++ + D
Sbjct: 273 SEAFGISLIEAQMYCKAIISSDIGTGSSYVNINGETGLVVPPADSQSFSDAMLKIEHDTK 332
Query: 355 LARKIGKTGRRLVEREYS 372
L K+G R+ E+E++
Sbjct: 333 LCEKLGINARKRFEQEFT 350
>emb|CAA18697.1| (AL022602) hypothetical protein MLCB268.31c [Mycobacterium leprae]
Length = 384
Score = 109 bits (271), Expect = 4e-23
Identities = 69/227 (30%), Positives = 112/227 (48%), Gaps = 13/227 (5%)
Query: 162 YYESKLLRRF--KKKLIWIPPGVDTERYFPGKSYR--LHSIYNLPRSAKIVMFIGTMNRG 217
Y S++ F + L ++PPGVD +R+ P + R L + Y L +V + R
Sbjct: 151 YTRSRVTAAFGPRAALEYLPPGVDADRFRPDPASRAELRNRYRLGERPTVVCLARLVPR- 209
Query: 218 HAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDI 277
KG L++A + + + L++VG G + +K+ G++ VIF G V
Sbjct: 210 ---KGQDMLIRALPSIRQRADGAALMIVGGGPYLGTLRKLAQGCGVADHVIFAGGVAAVE 266
Query: 278 LPEFYRSSDVIVLPSTTVQ-----EGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGI 332
+P Y +DV +P T EG G+V +EA A+G PVI GG +++ KTG+
Sbjct: 267 VPAHYTLADVFAMPCRTRGGGMDVEGLGIVFLEASATGVPVIAGKSGGAPEAVQHNKTGL 326
Query: 333 LVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEK 379
+V + +A+A+ LLTD + A +G GR V E+ WD + +
Sbjct: 327 VVDGRSVNMVADAVTELLTDRDRAAAMGAAGRHWVTAEWRWDTLAAR 373
>pir||S77553 probable hexosyltransferase (EC 2.4.1.-) sll1971 [similarity] -
Synechocystis sp. (strain PCC 6803)
>gi|1652478|dbj|BAA17400.1| (D90905) hypothetical
protein [Synechocystis sp.]
Length = 404
Score = 109 bits (269), Expect = 7e-23
Identities = 108/406 (26%), Positives = 198/406 (48%), Gaps = 37/406 (9%)
Query: 1 MKLLMITPYFYPE-GGGLEKYAYMIARGLVERGWEVKVIT-ASRKGNSLENLEGIEVIRL 58
MK+L++ F P GG+ ++ + LV++G+E+ +IT A+ + S E ++GI + R+
Sbjct: 10 MKILVLAWEFPPRIVGGIARHVAELYPELVQQGYEIHLITVATEESPSQEMVDGIHIYRV 69
Query: 59 ----APHFIVSNTPISFNLPLKLIKVFKEEQ-FSVINAHTPVPYYADVSAWVNNVLKGSN 113
+ F ++ + + +F+E++ F VI+AH + DV+ +N LK
Sbjct: 70 PVPPSNDFFQWVDNMNRAMEQRGQALFQEQKKFDVIHAHDWL--VGDVA--IN--LKHHG 123
Query: 114 KTPFVLTYHNDLVKEGFPLDKVAYLYN-----LSLQRGLLLLSD-TIITPSPYCYYESKL 167
K P V+T H + LYN ++ + G+L+ + +I S Y +E L
Sbjct: 124 KIPLVVTIH------ATEYGRYNGLYNDTQRYIAGKEGILIYNGWRVIVCSNYMRHE--L 175
Query: 168 LRRFKK---KLIWIPPGVDTERYF--PGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKG 222
R F K+ I G+ E+ P YR KIV ++G M KG
Sbjct: 176 ERAFGTPWDKIDVIYNGIRPEKKHRRPDFDYRNFRRKFAEDGEKIVYYVGRMTY---EKG 232
Query: 223 VPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFY 282
+ LL A V + D ++ G K++ +LGI + FTG++ ++ L +F
Sbjct: 233 ISVLLTAAPQVLEALNDQVKFVIIGGGNTDRLKQLAWNLGIWEHCFFTGFMSDEDLDKFQ 292
Query: 283 RSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRL 342
+D V PS + E FG+V +E+ A+ PV+ +N GG+ V+ + TGI+ +P L
Sbjct: 293 TIADCAVFPS--LYEPFGIVALESFAARVPVVVSNTGGLAEVVRHHSTGIVTQTNNPDSL 350
Query: 343 AEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTEIALKAIV 388
A I+ +L++ +LA+++ + + + ++W K+ ++T + +V
Sbjct: 351 AHGILEILSNPSLAKQLVEAAYKDLGIRFNWSKLAKETAAIYERVV 396
>sp|P42982|YPJH_BACSU HYPOTHETICAL 42.0 KDA PROTEIN IN DAPB-PAPS INTERGENIC REGION
>gi|7475602|pir||G69937 lipopolysaccharide
biosynthesis-related pr homolog ypjH - Bacillus subtilis
>gi|1146237|gb|AAB38445.1| (L47709) 21.4% of identity to
trans-acting transcription factor of Sacharomyces
cerevisiae; 25% of identity to sucrose synthase of Zea
mays; putative [Bacillus subtilis]
>gi|2634664|emb|CAB14162.1| (Z99115) alternate gene
name: jojH~similar to lipopolysaccharide
biosynthesis-related protein [Bacillus subtilis]
Length = 377
Score = 108 bits (268), Expect = 9e-23
Identities = 105/385 (27%), Positives = 177/385 (45%), Gaps = 22/385 (5%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITAS---RKGNSLENLEGIEVIR 57
M+ L I YP GG A + + L E+G E+ IT+S R N+ EV
Sbjct: 1 MRKLKIGITCYPSVGGSGIIATELGKQLAEKGHEIHFITSSIPFRLNTYHPNIHFHEV-E 59
Query: 58 LAPHFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPF 117
+ + + P L K+ +V + E +I+AH +P+ V A++ + N
Sbjct: 60 VNQYAVFKYPPYDLTLASKIAEVAERENLDIIHAHYALPHA--VCAYLAKQMLKRN-IGI 116
Query: 118 VLTYHNDLVKEGFPLDKVAYLYNLS-LQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLI 176
V T H G + + Y +L L R + SD + S E+ L + +KK+
Sbjct: 117 VTTLH------GTDITVLGYDPSLKDLIRFAIESSDRVTAVSSALAAETYDLIKPEKKIE 170
Query: 177 WIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQ 236
I +D Y + + + + K+V+ + + K V +++ F+ +A +
Sbjct: 171 TIYNFIDERVYLKKNTAAIKEKHGILPDEKVVIHVSNFRKV---KRVQDVIRVFRNIAGK 227
Query: 237 VKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQ 296
K + L+LVG G ++ G+ +V+ G +D + + Y SD+ +L S +
Sbjct: 228 TK-AKLLLVGDGPEKSTACELIRKYGLEDQVLMLG--NQDRVEDLYSISDLKLLLSE--K 282
Query: 297 EGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLA 356
E FG+VL+EA A G P IGTN+GGI VI+N +G LV D +++L D+ L+
Sbjct: 283 ESFGLVLLEAMACGVPCIGTNIGGIPEVIKNNVSGFLVDVGDVTAATARAMSILEDEQLS 342
Query: 357 RKIGKTGRRLVEREYSWDKIVEKTE 381
+ K ++E E+S KIV + E
Sbjct: 343 NRFTKAAIEMLENEFSSKKIVSQYE 367
>emb|CAB09632.1| (Z96801) hypothetical protein MLCL581.14c [Mycobacterium leprae]
Length = 374
Score = 108 bits (268), Expect = 9e-23
Identities = 104/387 (26%), Positives = 173/387 (43%), Gaps = 40/387 (10%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLEN--LEGIEVIRL 58
M++ MI PY + GG++ + +A + RG +V+V+ + SL + I +
Sbjct: 1 MRIGMICPYSFDVPGGVQSHVLQLAEVMRARGQQVRVLAPASPDVSLPEYVVSAGRAIPI 60
Query: 59 APHFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFV 118
+ V+ S + ++ + + F V++ H P +S W V +G P V
Sbjct: 61 PYNGSVARLQFSPAVHSRVRRWLVDGDFDVLHLHEPNA--PSLSMWALRVAEG----PIV 114
Query: 119 LTYHNDLVKEGFPLDKVAYLYNLSLQRGLLL-LSDTIITPSPYCYYESKLLRRFKKKLIW 177
T+H K LS+ +G+L + II S L RR++ + +
Sbjct: 115 ATFHTSTTKS----------LTLSVFQGVLRPWHEKIIGRIAV----SDLARRWQMEALG 160
Query: 178 -----IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKY 232
IP GV+ + + PR K V+F+G + KG+ LL A
Sbjct: 161 SDAVEIPNGVNVDSLSSAPQ-----LAGYPRLGKTVLFLGRYDE--PRKGMSVLLDALPG 213
Query: 233 VATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPS 292
V D L++VGRGD E + + G+ + + F G V++ RS+DV P+
Sbjct: 214 VMECFDDVQLLIVGRGD---EEQLRSQAGGLVEHIRFLGQVDDAGKAAAMRSADVYCAPN 270
Query: 293 TTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTD 352
E FG+VL+EA A+G PV+ +++ + V+ +G+ G LVP D LA+A+V LL +
Sbjct: 271 IG-GESFGIVLVEAMAAGTPVVASDLDAFRRVLRDGEVGHLVPAGDSAALADALVALLRN 329
Query: 353 DNLARKIGKTGRRLVEREYSWDKIVEK 379
D L + G V R Y W + +
Sbjct: 330 DVLRERYVAAGAEAV-RRYDWSVVASQ 355
>pir||T35514 probable glycosyl transferase - Streptomyces coelicolor
>gi|4539201|emb|CAB39859.1| (AL049497) putative glycosyl
transferase [Streptomyces coelicolor A3(2)]
Length = 412
Score = 107 bits (264), Expect = 3e-22
Identities = 67/220 (30%), Positives = 111/220 (50%), Gaps = 14/220 (6%)
Query: 174 KLIWIPPGVDTERYFP---GKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAF 230
+++ +PPGVD + + P G R + +V+ + +R KG L++A
Sbjct: 168 RMVQLPPGVDEKTFHPASGGDEVRARLGFT---DRPVVVCV---SRLVPRKGQDTLIRAM 221
Query: 231 KYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVL 290
+ D+ L++VG G + +++ G++ V FTG V LP Y + DV +
Sbjct: 222 PRILAAEPDAVLLIVGGGPYEKDLRRLAEETGVAAAVHFTGAVPWSELPAHYGAGDVFAM 281
Query: 291 PSTTVQ-----EGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEA 345
P T + EG G+V +EA A+G PV+ + GG + +G+TG +V +DP A+
Sbjct: 282 PCRTRRGGLDVEGLGIVYLEASATGLPVVAGDSGGAPDAVLDGETGWVVRGEDPNESADR 341
Query: 346 IVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTEIALK 385
I TLL D L R++G+ GR VE ++ WD + E L+
Sbjct: 342 ITTLLADPELRRRMGERGRAWVEEKWRWDLLAEHLRTLLQ 381
>pir||C72590 probable hexosyltransferase (EC 2.4.1.-) APE1191 [similarity] -
Aeropyrum pernix (strain K1) >gi|5104863|dbj|BAA80177.1|
(AP000061) 363aa long hypothetical capM protein
[Aeropyrum pernix]
Length = 363
Score = 106 bits (263), Expect = 4e-22
Identities = 106/370 (28%), Positives = 177/370 (47%), Gaps = 41/370 (11%)
Query: 11 YPEGGGLEKYAYMIARGLVERGWEVKVIT--ASRKGNSLENLEGIEVIRLAPHFIVSNTP 68
+P+ GG E Y IAR LV+ G EV V+ SR E LEGI + R
Sbjct: 13 HPQAGGAEVRLYEIARRLVKMGHEVMVLCEKVSRLPGE-EVLEGIRIKRSG-----GRAS 66
Query: 69 ISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHN---DL 125
I PL + K E V + VP+Y+ + KTP V H+ D+
Sbjct: 67 IHLLAPLYVRKHGHEYDVIVDDIAHAVPWYSPLVT----------KTPVVAQIHHVHQDV 116
Query: 126 VKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYE-SKLLRRFKKKLIWIPPGVDT 184
V P +A++ + + ++ + + I S E +K L ++ +P GVD
Sbjct: 117 VYIELP-KPLAWIVSRA-EKTIAKIYRRFIAVSQSTKKELAKRLGIDPDRIAVVPNGVDL 174
Query: 185 ERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVL 244
E+Y PG PR +++ G + +K + +LLKA++ V ++ D+ L++
Sbjct: 175 EKYRPGSKD--------PRPT--ILWAGRIKM---YKNLDHLLKAYRIVKQEIPDAQLII 221
Query: 245 VGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLI 304
+G GD + +++ L + V F G + E + + + +IV ST++ EG+G+ +
Sbjct: 222 IGTGDQEQKMRELAKKLE-PRDVHFLGKMSEQEKIMWMQRAWIIV--STSMIEGWGITIT 278
Query: 305 EAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGR 364
EA A P I NV G++ +++ +TGILV P + +LA+AI LLTD++L K+ +
Sbjct: 279 EAAACKIPAIAYNVPGLRDSVKHMETGILVEPGNIEQLAKAIAWLLTDNSLRNKLSENAY 338
Query: 365 RLVEREYSWD 374
+ +SWD
Sbjct: 339 NYAQ-SFSWD 347
>pir||C72340 probable hexosyltransferase (EC 2.4.1.-) TM0744 - Thermotoga
maritima (strain MSB8)
>gi|4981269|gb|AAD35825.1|AE001744_15 (AE001744)
conserved hypothetical protein [Thermotoga maritima]
Length = 406
Score = 105 bits (260), Expect = 8e-22
Identities = 93/384 (24%), Positives = 174/384 (45%), Gaps = 23/384 (5%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAP 60
M + M + + P+ G+ + + L ERG +V V+ S E + + V+R P
Sbjct: 1 MNIAMFSDTYAPQINGVATSIRVYKKKLTERGHKVVVVAPSAP----EEEKDVFVVRSIP 56
Query: 61 HFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLT 120
IS +++ +E +I++H+P ++ A G P V T
Sbjct: 57 FPFEPQHRISIASTKNILEFMRENNVQIIHSHSP--FFIGFKALRVQEEMG---LPHVHT 111
Query: 121 YHNDLVKEGFPLDKVAYLYNLSLQR---GLLLLSDTIITPSPYCYYESKLLRRFKKKLIW 177
YH L + + K ++ +++ +I P+ E + K+ +
Sbjct: 112 YHTLLPEYRHYIPKPFTPPKRLVEHFSAWFCNMTNVVIAPTEDIKRELESYG-VKRPIEV 170
Query: 178 IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQV 237
+P G++ E++ L +N P K+V++ G + + K + +LL+ F+ +
Sbjct: 171 LPTGIEVEKFEVEAPEELKRKWN-PEGKKVVLYAGRIAK---EKNLDFLLRVFE--SLNA 224
Query: 238 KDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQE 297
++VG G E ++ G+ ++ TG+V D +P +Y+ DV V S T E
Sbjct: 225 PGIAFIMVGDGPEREEVEEFAKEKGLDLKI--TGFVPHDEIPLYYKLGDVFVFASKT--E 280
Query: 298 GFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLAR 357
G+VL+EA ASG PV+ G+K V++N + +L+ ++ AE I +L +D L
Sbjct: 281 TQGLVLLEALASGLPVVALKWKGVKDVLKNCEAAVLIEEENERLFAEKIKHILKNDRLRE 340
Query: 358 KIGKTGRRLVEREYSWDKIVEKTE 381
++ GR V +E+S D+ V++ E
Sbjct: 341 ELSTKGREFVRKEWSVDRFVQRLE 364
>dbj|BAB06024.1| (AP001515) lipopolysaccharide N-acetylglucosaminyltransferase
[Bacillus halodurans]
Length = 502
Score = 104 bits (258), Expect = 1e-21
Identities = 91/292 (31%), Positives = 139/292 (47%), Gaps = 28/292 (9%)
Query: 105 VNNVLKGSNKTPFVLTYHNDLVK-EGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYY 163
V V + + K VL+ HND+ K E ++ AY D IIT S Y
Sbjct: 96 VRPVREAAPKARIVLSMHNDMFKREKITPEEAAYAIEQV---------DKIITISQYIGE 146
Query: 164 ESKL-LRRFKKKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSA------KIVMFIGTMNR 216
K + + KL I GVD +R+ P S + SI + R K+++F G ++
Sbjct: 147 TIKQPFPQAEPKLQTIYSGVDLDRFVPIYSQKARSIRDQLRQEHQLEGKKVILFSGRLS- 205
Query: 217 GHAHKGVPYLLKAFKYVATQVKDSYLVLVGR----GDMIPEYKKMCMSLGISKR--VIFT 270
A+KG L++A + + LVL+G D + +Y SL V+ T
Sbjct: 206 --ANKGADVLVRAMHELGKSFSNVALVLMGSKWFSDDGVTDYVAYVRSLANRSPIPVVTT 263
Query: 271 GYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKT 330
G+V + ++Y ++D+ V PS QE V EA ASG P++ T GG VIE K
Sbjct: 264 GFVNPMDIHKWYAAADLFVCPSQW-QEPLARVHYEAMASGLPIVTTARGGNPEVIEQNKN 322
Query: 331 GILVPP-KDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTE 381
G++V ++P A+ + LL D L ++G+ GR+L E +YSWD++V E
Sbjct: 323 GLVVEDVENPTAFAQELSKLLADPQLCLEMGRYGRQLAEEKYSWDRVVRDIE 374
>pir||A82964 glycosyltransferase WbpZ PA5447 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9951778|gb|AAG08832.1|AE004958_2
(AE004958) glycosyltransferase WbpZ [Pseudomonas
aeruginosa]
Length = 381
Score = 103 bits (255), Expect = 3e-21
Identities = 98/351 (27%), Positives = 166/351 (46%), Gaps = 29/351 (8%)
Query: 15 GGLEKYAYMIARGLVERGWEVKVITASRKGNS-LENLEGIEVIRLAPHFIVSNTPISFNL 73
GG+E+ + + G + V+T S + + G V R +++T S
Sbjct: 16 GGIEQVIFQLCESSGSWGIDNHVLTLSSDPHPPVVPFGGHVVHRARLDLQLASTGFS--- 72
Query: 74 PLKLIKVFKE--EQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVKEGFP 131
L + K F+E + V+N H P P+ V + L G NK P V+TYH+D++++
Sbjct: 73 -LSVFKQFRELAAEADVVNYHFPWPFMDLV-----HFLTGMNK-PSVVTYHSDIIRQRVL 125
Query: 132 LDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERYFPGK 191
L LY + R L + D I+ SP + S +LR++++K I G+D + Y
Sbjct: 126 LK----LYRPLMSRFLHSV-DRIVAASPNYFSTSDVLRQYREKTRVITYGLDKDGYPKPA 180
Query: 192 SYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMI 251
+ RL + + +F+G M +KG+ LL A Q D +V+VG G +
Sbjct: 181 TQRLEH-WREKLGPRFFLFVGVMRY---YKGLHILLDAL-----QGTDYPVVIVGAGPLQ 231
Query: 252 PEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGK 311
E +LG+ + V F G V+++ + S +V PS E FG+ L+E GK
Sbjct: 232 AELYAQAAALGL-RNVHFLGRVDDEDKVALLQLSYAMVFPSHLRSEAFGISLLEGAMYGK 290
Query: 312 PVIGTNVG-GIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGK 361
P+I + +G G ++ +G+TG++VPP P +A+ L A ++G+
Sbjct: 291 PMISSEIGTGTSYINIHGETGLVVPPSQPAAFRQAMRWLWEHPQQAEEMGR 341
>pir||E72354 probable hexosyltransferase (EC 2.4.1.-) TM0622 - Thermotoga
maritima (strain MSB8)
>gi|4981142|gb|AAD35706.1|AE001736_4 (AE001736)
lipopolysaccharide biosynthesis protein, putative
[Thermotoga maritima]
Length = 388
Score = 103 bits (254), Expect = 4e-21
Identities = 67/201 (33%), Positives = 108/201 (53%), Gaps = 13/201 (6%)
Query: 181 GVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDS 240
G+D +++ + R+ R I++ + ++R H L++AF +
Sbjct: 178 GIDVQKFSIDQPKRVD------RDKTILINVARLSREKNHA---LLVRAFSKAVQSCPNL 228
Query: 241 YLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFG 300
L LVG G++ + +++ LG+ ++V F G V D+ PE +D+ VL S EGFG
Sbjct: 229 ELWLVGDGELRRDIEELVKQLGLEEKVKFFG-VRSDV-PELLSQADIFVLSSD--YEGFG 284
Query: 301 MVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIG 360
+V+ EA A+G PVI T +GGI ++E G+ GILVPPKD LA+AIV L D+ ++
Sbjct: 285 LVVAEAMAAGLPVIATAIGGIPEILEGGRAGILVPPKDVDALAKAIVELARDEKKRAELS 344
Query: 361 KTGRRLVEREYSWDKIVEKTE 381
GR+LV + + V + E
Sbjct: 345 DYGRKLVAERFDIRRTVREYE 365
>gb|AAC38772.1| (AF010183) glycosyltransferase WbpZ [Pseudomonas aeruginosa]
Length = 381
Score = 102 bits (253), Expect = 5e-21
Identities = 87/295 (29%), Positives = 144/295 (48%), Gaps = 24/295 (8%)
Query: 70 SFNLPLKLIKVFKE--EQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVK 127
S L + K F+E + V+N H P P+ V + L G NK P V+TYH+D+++
Sbjct: 68 STGFSLSVFKQFRELAAEADVVNYHFPWPFMDLV-----HFLTGMNK-PSVVTYHSDIIR 121
Query: 128 EGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERY 187
+ L LY + R L + D I+ SP + S +LR++++K I G+D + Y
Sbjct: 122 QRVLLK----LYRPLMSRFLHSV-DRIVAASPNYFSTSDVLRQYREKTRVITYGLDKDGY 176
Query: 188 FPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGR 247
+ RL + + +F+G M +KG+ LL A Q D +V+VG
Sbjct: 177 PKPATQRLEH-WREKLGPRFFLFVGVMRY---YKGLHILLDAL-----QGTDYPVVIVGA 227
Query: 248 GDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAG 307
G + E +LG+ + V F G V+++ + S +V PS E FG+ L+E
Sbjct: 228 GPLQAELYAQTAALGL-RNVHFLGRVDDEDKVALLQLSYAMVFPSHLRSEAFGISLLEGA 286
Query: 308 ASGKPVIGTNVG-GIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGK 361
GKP+I + +G G ++ +G+TG++VPP P +A+ L A ++G+
Sbjct: 287 MYGKPMISSEIGTGTSYINIHGETGLVVPPSQPAAFRQAMRWLWEHPQQAEEMGR 341
>dbj|BAB06407.1| (AP001516) alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol
monomannoside transferase [Bacillus halodurans]
Length = 381
Score = 102 bits (252), Expect = 7e-21
Identities = 65/221 (29%), Positives = 117/221 (52%), Gaps = 13/221 (5%)
Query: 171 FKKKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAF 230
F++ +W GVD ER+ P + +R ++I LP+ +++++G + K + L+
Sbjct: 166 FQRLALWTR-GVDCERFHPKQRHRSYAINLLPKDKAVLLYVGRLA---PEKDLATLVAIM 221
Query: 231 KYVATQVKDSYL-VLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIV 289
+ ++ + ++VG G +PE KK C S V FTGY++ + L Y S+D+ V
Sbjct: 222 SLLPRELNEKIQWMIVGDGPSLPEMKKQCPS-----NVTFTGYLKGEELAAAYASADLFV 276
Query: 290 LPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTL 349
PS T E FG V++EA ASG P I + GG+ ++E+GK+G++ D +AI L
Sbjct: 277 FPSAT--ETFGNVVLEAFASGTPAIVADRGGVTEIVEHGKSGMICKAGDAHTFIQAIEHL 334
Query: 350 LTDDNLARKIGKTGRRLVEREYSWDKIVEKTEIALKAIVNH 390
L + + ++G R+ + SW++I + + ++ H
Sbjct: 335 LMNRSKRAEMGYEARQYALTQ-SWERIFDDLLEQYEQVIFH 374
>gb|AAA92877.1| (L38424) unknown [Bacillus subtilis]
Length = 357
Score = 101 bits (250), Expect = 1e-20
Identities = 97/362 (26%), Positives = 168/362 (45%), Gaps = 22/362 (6%)
Query: 24 IARGLVERGWEVKVITAS---RKGNSLENLEGIEVIRLAPHFIVSNTPISFNLPLKLIKV 80
+ + L E+G E+ IT+S R N+ EV + + + P L K+ +V
Sbjct: 4 LGKQLAEKGHEIHFITSSIPFRLNTYHPNIHFHEV-EVNQYAVFKYPPYDLTLASKIAEV 62
Query: 81 FKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVKEGFPLDKVAYLYN 140
+ E +I+AH +P+ V A++ + N V T H G + + Y +
Sbjct: 63 AERENLDIIHAHYALPHA--VCAYLAKQMLKRN-IGIVTTLH------GTDITVLGYDPS 113
Query: 141 LS-LQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERYFPGKSYRLHSIY 199
L L R + SD + S E+ L + +KK+ I +D Y + + +
Sbjct: 114 LKDLIRFAIESSDRVTAVSSALAAETYDLIKPEKKIETIYNFIDERVYLKKNTAAIKEKH 173
Query: 200 NLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCM 259
+ K+V+ + + K V +++ F+ +A + K + L+LVG G ++
Sbjct: 174 GILPDEKVVIHVSNFRKV---KRVQDVIRVFRNIAGKTK-AKLLLVGDGPEKSTACELIR 229
Query: 260 SLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVG 319
G+ +V+ G +D + + Y SD+ +L S +E FG+VL+EA A G P IGTN+G
Sbjct: 230 KYGLEDQVLMLG--NQDRVEDLYSISDLKLLLSE--KESFGLVLLEAMACGVPCIGTNIG 285
Query: 320 GIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEK 379
GI VI+N +G LV D +++L D+ L+ + K ++E E+S KIV +
Sbjct: 286 GIPEVIKNNVSGFLVDVGDVTAATARAMSILEDEQLSNRFTKAAIEMLENEFSSKKIVSQ 345
Query: 380 TE 381
E
Sbjct: 346 YE 347
>emb|CAB91117.1| (AL355913) putative glycosyl transferase [Streptomyces coelicolor
A3(2)]
Length = 391
Score = 100 bits (246), Expect = 4e-20
Identities = 65/201 (32%), Positives = 97/201 (47%), Gaps = 10/201 (4%)
Query: 180 PGVDTERYFPGKS-YRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVK 238
PGVDT + P R+ + Y L I+ + R KG L++A +V V
Sbjct: 170 PGVDTGTFHPAADGTRVRTRYGLGHRPVILCAARLVPR----KGQDTLIRALPWVRRAVP 225
Query: 239 DSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQ-- 296
D+ L+LVG G +++ + G+ V F G LP FY ++D +P T +
Sbjct: 226 DAVLLLVGDGPHAAGLRQLALREGVMDSVHFAGGHPHHALPAFYAAADAFAMPCRTRKGG 285
Query: 297 ---EGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDD 353
EG G+V +EA ASG PV+ + GG + G+TG +V + A+ ++ LL D
Sbjct: 286 LELEGLGIVYLEAAASGLPVVAGDSGGAPDAVREGETGHVVDGRSVAATADRLIRLLRDP 345
Query: 354 NLARKIGKTGRRLVEREYSWD 374
LAR +G GR V +SWD
Sbjct: 346 RLARAMGGAGRDWVRTAWSWD 366
>gb|AAB84956.1| (AE000829) LPS biosynthesis RfbU related protein [Methanobacterium
thermoautotrophicum]
Length = 411
Score = 99.8 bits (245), Expect = 5e-20
Identities = 103/363 (28%), Positives = 164/363 (44%), Gaps = 46/363 (12%)
Query: 41 SRKGNSLENLEGIEVIRLAPH-----FIVSNTPISFNLPLKLIKVFK----------EEQ 85
SRKG S + + V H F+V+NT LP+ + K +
Sbjct: 62 SRKGKSFGSFVKVHVDAFRRHTSIKQFVVANTDQRKGLPVLIRKYGSLLLRSLWYSIRKP 121
Query: 86 FSVINAHT--PVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVKEGFPLDKVAYLYNLSL 143
F VI+AH P + + W++ P V+T H G ++K+A +L
Sbjct: 122 FDVIHAHYLFPTGFIGLLCHWISG-------KPLVVTVH------GSDVNKLARKNSLLS 168
Query: 144 QRGLLLLSDTIITPSPYCYYESKLLRRF---KKKLIWIPPGVDTERYFPGKSYRLHSIYN 200
+ +L T + K++ F + K+ I GVDT+ + P
Sbjct: 169 KISGFILRRTSAVIAVSRDLGEKVVNEFGVDRGKVHVINMGVDTDIFMPLDRDECRERLG 228
Query: 201 LPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMS 260
LP ++V+F+G + KGV YL+++ K + ++ D +++G + EY +
Sbjct: 229 LPLKGRVVLFVGNIIPS---KGVYYLIESLKDL--ELDDVKCIILG-APVDEEYLRTLRG 282
Query: 261 LGIS--KRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNV 318
L S V F G V +P + ++DV VLPS ++EGFG+V +EA A G PVI T
Sbjct: 283 LAESMDSDVEFFGPVPYTEVPTWMNAADVFVLPS--LEEGFGLVALEALACGTPVIATAT 340
Query: 319 GGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLA--RKIGKTGRRLVEREYSWDKI 376
GGI + + +TG VPP D +A+ I +L +N A + + G RL E +S K
Sbjct: 341 GGIMEFVRDSETGYTVPPGDSRAIADRIKRILDPENRAEVESMRERGMRLAE-SFSTIKQ 399
Query: 377 VEK 379
+EK
Sbjct: 400 IEK 402
>pir||H69158 LPS biosynthesis RfbU related protein - Methanobacterium
thermoautotrophicum (strain Delta H)
Length = 411
Score = 99.8 bits (245), Expect = 5e-20
Identities = 103/363 (28%), Positives = 164/363 (44%), Gaps = 46/363 (12%)
Query: 41 SRKGNSLENLEGIEVIRLAPH-----FIVSNTPISFNLPLKLIKVFK----------EEQ 85
SRKG S + + V H F+V+NT LP+ + K +
Sbjct: 62 SRKGKSFGSFVKVHVDAFRRHTSIKQFVVANTDQRKGLPVLIRKYGSLLLRSLWYSIRKP 121
Query: 86 FSVINAHT--PVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVKEGFPLDKVAYLYNLSL 143
F VI+AH P + + W++ P V+T H G ++K+A +L
Sbjct: 122 FDVIHAHYLFPTGFIGLLCHWISG-------KPLVVTVH------GSDVNKLARKNSLLS 168
Query: 144 QRGLLLLSDTIITPSPYCYYESKLLRRF---KKKLIWIPPGVDTERYFPGKSYRLHSIYN 200
+ +L T + K++ F + K+ I GVDT+ + P
Sbjct: 169 KISGFILRRTSAVIAVSRDLGEKVVNEFGVDRGKVHVINMGVDTDIFMPLDRDECRERLG 228
Query: 201 LPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMS 260
LP ++V+F+G + KGV YL+++ K + ++ D +++G + EY +
Sbjct: 229 LPLKGRVVLFVGNIIPS---KGVYYLIESLKDL--ELDDVKCIILG-APVDEEYLRTLRG 282
Query: 261 LGIS--KRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNV 318
L S V F G V +P + ++DV VLPS ++EGFG+V +EA A G PVI T
Sbjct: 283 LAESMDSDVEFFGPVPYTEVPTWMNAADVFVLPS--LEEGFGLVALEALACGTPVIATAT 340
Query: 319 GGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLA--RKIGKTGRRLVEREYSWDKI 376
GGI + + +TG VPP D +A+ I +L +N A + + G RL E +S K
Sbjct: 341 GGIMEFVRDSETGYTVPPGDSRAIADRIKRILDPENRAEVESMRERGMRLAE-SFSTIKQ 399
Query: 377 VEK 379
+EK
Sbjct: 400 IEK 402
>pir||T34839 probable hexosyltransferase (EC 2.4.1.-) SC2G5.06 [similarity] -
Streptomyces coelicolor >gi|4455730|emb|CAB36593.1|
(AL035478) putative transferase [Streptomyces coelicolor
A3(2)]
Length = 406
Score = 99.1 bits (243), Expect = 8e-20
Identities = 104/419 (24%), Positives = 184/419 (43%), Gaps = 69/419 (16%)
Query: 1 MKLLMITPYFYP-------EGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLEN---L 50
M++ M++ + P + GG Y +A L RG +V V T R L L
Sbjct: 1 MRIAMVSEHASPLAALGGVDAGGQNVYVARLAEELAGRGHDVTVYTR-RDATDLPARVPL 59
Query: 51 EG---IEVIRLAPHFIVSNTPISFNLPL---KLIKVFKEEQFSVINAHTPVPYYADVSAW 104
G +E + P V + ++P L + + E+ V++AH + S
Sbjct: 60 PGGAVVEHVPAGPPVTVPKDELFPHMPAFGAHLARAWARERPDVVHAHFWM------SGM 113
Query: 105 VNNVLKGSNKTPFVLTYH--------NDLVKEGFPLDKVAYLYNL--SLQRGLLLLSDTI 154
+ + + P V T+H + +++ P +++ L + +R L +D +
Sbjct: 114 ASQIGAAPHGIPLVQTFHALGTVKRRHQGMRDTSPYERIGIERQLGRTCERVLATCTDEV 173
Query: 155 ITPSPYCYYESKLLRRFKKKLIWIPPGVDTERYFP----GKSYRLHSIYNLPRSAKIVMF 210
+ E + +++ +P GVD E + P G++ + L ++V
Sbjct: 174 V--------ELGDMGVPARQVSVVPCGVDAEHFHPAADTGRTPERRLRHRLLACGRLV-- 223
Query: 211 IGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRG-----DMIPEYKKM---CMSLG 262
KG ++A ++ D+ L++ G + PE +++ G
Sbjct: 224 --------PRKGYDQAVRALAHIP----DAELLIAGGPPAGALETEPEARRLTGIARRAG 271
Query: 263 ISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIK 322
++ RV G V+ D +P RSSD+++ T V E FG+V +EA A G PV+ T+VGG +
Sbjct: 272 VADRVRLLGAVDPDDMPALLRSSDLVLC--TPVYEPFGIVPLEAMACGVPVLATDVGGHR 329
Query: 323 HVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTE 381
+ +G TG LV P+DP +A A LL D+ L R+ G+ GR V R Y+W ++ + E
Sbjct: 330 DSVADGVTGRLVAPQDPGAVAAAARELLADERLRRQYGRNGRERVLRHYTWARVADGAE 388
>dbj|BAB05134.1| (AP001512) unknown conserved protein in others [Bacillus
halodurans]
Length = 923
Score = 99.1 bits (243), Expect = 8e-20
Identities = 95/380 (25%), Positives = 172/380 (45%), Gaps = 28/380 (7%)
Query: 15 GGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAPHFIVSNTPI----- 69
GGL ++ +++ L ++G E+ V+TA+ G G I P
Sbjct: 552 GGLSRHVDALSQALAKKGHEIHVVTAAMDGAPEYEKNGEVHIHRVSGLQPEREPFLDWVA 611
Query: 70 SFNLPL--KLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYH--NDL 125
S NL + + K+++ F VI+AH + A ++ LK +T + T H
Sbjct: 612 SLNLAMFEHVKKLYRFRPFDVIHAHDWLVSGAALA------LKHLFQTSLMATIHATEHG 665
Query: 126 VKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCY-YESKLLRRFKKKLIWIPPGVDT 184
+G + ++ ++ L+ +D II S + + L K+ I GV
Sbjct: 666 RNQGIHTELQQAIHEQEMK--LVTEADQIIVCSQFMKEHVQSLFVPNPDKVAVIANGVAR 723
Query: 185 ERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVL 244
E+ ++ RL +I P + IV +G + + KG L++A + V+
Sbjct: 724 EQI---EAARLQTIS--PENRFIVFSVGRIVQ---EKGFSLLIEAAAKCKELGEPIQFVV 775
Query: 245 VGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLI 304
G G ++ +Y++ + + F GY+ + E+Y +DV + PS + E FG+V +
Sbjct: 776 AGHGPLLADYQQQVKERHLEAWISFVGYISDSERNEWYHRADVCIFPS--LYEPFGIVAL 833
Query: 305 EAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGR 364
EA A+G P I ++ GG+ ++E+G G+ VP D + +++L L +IG G
Sbjct: 834 EAMAAGTPTIVSDTGGLAEIVEHGDNGLKVPTGDVDAIVAQLLSLYHKPLLRAQIGFKGS 893
Query: 365 RLVEREYSWDKIVEKTEIAL 384
+ V +YSW+ I ++TE L
Sbjct: 894 QDVIEQYSWETIADQTEAIL 913
>dbj|BAB07095.1| (AP001518) lipopolysaccharide biosynthesis [Bacillus halodurans]
Length = 397
Score = 98.3 bits (241), Expect = 1e-19
Identities = 102/404 (25%), Positives = 184/404 (45%), Gaps = 33/404 (8%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITA--SRKGNSLENLEGIEVIRL 58
M++L+ T + YP GG+ Y +++ L+ G+ V + + S K + N + ++ +
Sbjct: 1 MRILIATYWSYPSLGGITTYIKELSQQLMRNGYHVDIFSLHPSLKSYYVVNSD-VKFSKK 59
Query: 59 APHFIVSNTPISFNLPLKLIKVFKEEQFSVINA---HTPVPYYADV------SAWVNNVL 109
++SN S LP L ++E + S A P+ Y + S + + +
Sbjct: 60 KMKAMISNQNAS--LPSDLWMRYQEIERSCYEAAASQLPLNQYDLIHTQDIFSTNIFSRI 117
Query: 110 KGSNKTPFVLTYHN----DLVKEGF-PLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYE 164
K N P V T H ++++ G + + Y+ + L S IITPS + +
Sbjct: 118 KPKN-VPLVTTVHGCFSTEMIRYGIIKKNTERWKYSTEFESRALSESQHIITPSNWLNHY 176
Query: 165 SKLLRRFKK-KLIWIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGV 223
K L K ++ + G+ + +L+ ++ P S + + + R KG
Sbjct: 177 LKELFCLKGVRITTVHNGLSVSSFLS----KLNQAFHPPSSQSKKIVLSCIARLTPLKGH 232
Query: 224 PYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYR 283
YLL A + D +G G++ + L + V F G+ ++ +P
Sbjct: 233 IYLLDALAELKKNTLDWECWFIGNGEIKKKLVNKTRKLNLQNHVKFLGFQKD--IPNSLN 290
Query: 284 SSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLA 343
+D+++LPS +QE V++EA SG PVI T+VGGI +IE +TG+L PPKD L
Sbjct: 291 QTDILILPS--LQENLPYVIMEAQISGTPVIATHVGGIPEMIEPFRTGLLSPPKDSDTLY 348
Query: 344 EAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTEIALKAI 387
+ I LL + L I ++ + E++++ +E+T + AI
Sbjct: 349 KNIQLLLQNKTLKTDIIRSAKEFGEKQWA----IERTTKEVNAI 388
>dbj|BAB05402.1| (AP001512) unknown conserved protein [Bacillus halodurans]
Length = 375
Score = 97.1 bits (238), Expect = 3e-19
Identities = 93/374 (24%), Positives = 164/374 (42%), Gaps = 20/374 (5%)
Query: 11 YPEGGGLEKYAYMIARGLVERGWEVKVITAS---RKGNSLENLEGIEVIRLAPHFIVSNT 67
YP GG A + + L E+G EV IT+S R N+ EV + + +
Sbjct: 10 YPTVGGSGVVATELGKLLAEKGHEVHFITSSVPFRLEPVNPNIYFHEV-EVNQYSVFKYP 68
Query: 68 PISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVK 127
P L K+ +V K ++ +++ H VP+ + A + + G + + D+
Sbjct: 69 PYDLTLSSKMAEVAKRQELDLLHVHYAVPHA--ICAILAKQMVGDSLKVVTTLHGTDITV 126
Query: 128 EGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERY 187
G+ +A + +++ SD + S ++K L +K + + VD Y
Sbjct: 127 LGYD-PALAEIIKFGIEK-----SDLVTAVSDDLVKQTKTLLHTEKPIETVYNFVDPREY 180
Query: 188 FPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGR 247
+ L + Y + K+V+ + R K VP +++ F+ + VK + L+L+G
Sbjct: 181 YRKDVSELKATYGIGEDEKVVVHVSNFRRV---KRVPDIIRCFRIIREHVK-AKLLLIGD 236
Query: 248 GDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAG 307
G + L + V+ G + +PE SDV++L S +E FG+V +EA
Sbjct: 237 GPDATLACHLIKELDLKDDVLMLG--NQKHIPELMSLSDVMLLLSE--KESFGLVALEAM 292
Query: 308 ASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLV 367
A G PVIG N+GGI VI + +TG + D +A+ + LLT+ +
Sbjct: 293 ACGVPVIGANIGGIPEVIVDEETGYICEIGDIQGVAQKAIELLTNKRRHEMFAEASINRA 352
Query: 368 EREYSWDKIVEKTE 381
+S ++IV + E
Sbjct: 353 ATVFSSEQIVRQYE 366
>pir||F70441 capsular polysaccharide biosynthsis protein - Aquifex aeolicus
>gi|2983976|gb|AAC07522.1| (AE000749) capsular
polysaccharide biosynthsis protein [Aquifex aeolicus]
Length = 316
Score = 95.2 bits (233), Expect = 1e-18
Identities = 64/192 (33%), Positives = 98/192 (50%), Gaps = 15/192 (7%)
Query: 183 DTERYFPGKSYRLHSIYNLPRSAKIVM-----------FIGTMNRGHAHKGVPYLLKAFK 231
D ++ F K +L +YNL KI +I + R KG PY+L+AFK
Sbjct: 106 DLKQTFWIKDDKLKVVYNLIDIDKIRKQADESINVDFDYIIAVGRLEDQKGYPYMLRAFK 165
Query: 232 YVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLP 291
++ + KD +L+++G G + +K+ LG+ +V GY + P Y L
Sbjct: 166 LISEKFKDLHLLIIGEGSKKNQVEKLIEELGLKNKVHLLGY---QLNPYKYIKRAKAYL- 221
Query: 292 STTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLT 351
T++ EGFG+VL+EA A G PVI ++ ++ V+ +GK G+LVP D A+ + LLT
Sbjct: 222 MTSIYEGFGLVLVEAMALGIPVIAFDIPAVREVLNDGKAGVLVPFGDINAFAKGLEKLLT 281
Query: 352 DDNLARKIGKTG 363
D NL K G
Sbjct: 282 DRNLREYYIKNG 293
>pir||H64446 probable hexosyltransferase (EC 2.4.1.-) MJ1178 [similarity] -
Methanococcus jannaschii >gi|1591805|gb|AAB99181.1|
(U67559) conserved hypothetical protein [Methanococcus
jannaschii]
Length = 351
Score = 93.6 bits (229), Expect = 3e-18
Identities = 101/383 (26%), Positives = 168/383 (43%), Gaps = 53/383 (13%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITA-SRKGNSLENLEGIEVIRLA 59
MK+LM + Y YP GG+ + + + L + E ++T S + N +N+ +I
Sbjct: 4 MKVLMPSIY-YPYIGGITLHVENLVKRL--KDIEFHILTYDSYEENEYKNV----IIHNV 56
Query: 60 PHFIVSNTPISFNLPLKLI--KVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPF 117
PH + IS+ + I + + E +I++H YA V +LK P
Sbjct: 57 PH-LKKFRGISYLINAYKIGKNIIESEGIDLIHSH-----YAFPQGCVGALLKNKLSIPH 110
Query: 118 VLTYHND---LVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKK 174
+LT H ++K K Y + + SD II S Y +++L K +
Sbjct: 111 ILTLHGSDALILKNSI---KGRYFFKYATTN-----SDKIICVSKYI--KNQLDENLKNR 160
Query: 175 LIWIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVA 234
I I GV+ E + Y +F+G KGV L+ A K +
Sbjct: 161 AIVIYNGVNKEILYNEGDYNFG------------LFVGAFV---PQKGVDILIDAIKDID 205
Query: 235 TQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTT 294
K L+G G + + + + +S + G D + F R +V+PS +
Sbjct: 206 FNFK-----LIGDGKLYKKIENFVVKNNLS-HIELLGRKSFDEVASFMRKCSFLVVPSRS 259
Query: 295 VQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDN 354
EGFGMV +E A KPVI T VGG+ ++ +G G+L +P L E I+ L+ ++
Sbjct: 260 --EGFGMVAVEGMACSKPVIATRVGGLGEIVIDGYNGLLAEKNNPNDLKEKILELINNEE 317
Query: 355 LARKIGKTGRRLVEREYSWDKIV 377
L + +G+ G+ +++SW+K V
Sbjct: 318 LRKTLGENGKEF-SKKFSWEKCV 339
>pir||A70571 probable hexosyltransferase (EC 2.4.1.-) Rv2610c [similarity] -
Mycobacterium tuberculosis (strain H37RV)
>gi|2104303|emb|CAB08632.1| (Z95387) hypothetical
protein Rv2610c [Mycobacterium tuberculosis]
Length = 378
Score = 93.6 bits (229), Expect = 3e-18
Identities = 100/391 (25%), Positives = 170/391 (42%), Gaps = 44/391 (11%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLEN--LEGIEVIRL 58
M++ MI PY + GG++ + +A + RG V V+ + +L + + G + +
Sbjct: 1 MRIGMICPYSFDVPGGVQSHVLQLAEVMRTRGHLVSVLAPASPHAALPDYFVSGGRAVPI 60
Query: 59 APHFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFV 118
+ V+ K+ K F V++ H P +S N+ +G P V
Sbjct: 61 PYNGSVARLRFGPATHRKVKKWLAHGDFDVLHLHEPNA--PSLSMLALNIAEG----PIV 114
Query: 119 LTYHNDLVKEGFPLDKVAYLYNLSLQRGLLL-LSDTIITPSPYCYYESKLLRRFKKKLIW 177
T+H K L++ +G+L + + I+ S L RR++ + +
Sbjct: 115 ATFHTSTTKS----------LTLTVFQGILRPMHEKIVGRIAV----SDLARRWQMEALG 160
Query: 178 -----IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKY 232
IP GVD + + + RL PR K V+F+G + KG+ LL A
Sbjct: 161 SDAVEIPNGVDVDSF--ASAARLDGY---PRQGKTVLFLGRYDE--PRKGMAVLLDALPK 213
Query: 233 VATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPS 292
V + D L++VG GD + + L R F G V++ RS+DV P+
Sbjct: 214 VVQRFPDVQLLIVGHGDA-DQLRGQAGRLAAHLR--FLGQVDDAGKASAMRSADVYCAPN 270
Query: 293 TTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDP----FRLAEAIVT 348
T E FG+VL+EA A+G V+ +++ + V+ +G+ G LVP P LA+ ++
Sbjct: 271 TG-GESFGIVLVEAMAAGTAVVASDLDAFRRVLRDGEVGHLVPVDPPDLQAAALADGLIA 329
Query: 349 LLTDDNLARKIGKTGRRLVEREYSWDKIVEK 379
+L +D L + G V R Y W + +
Sbjct: 330 VLENDVLRERYVAAGNAAV-RRYDWSVVASQ 359
>pir||F69142 probable hexosyltransferase (EC 2.4.1.-) MTH332 [similarity] -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621388|gb|AAB84838.1| (AE000818) LPS biosynthesis
RfbU related protein [Methanobacterium
thermoautotrophicum]
Length = 400
Score = 92.8 bits (227), Expect = 6e-18
Identities = 111/380 (29%), Positives = 168/380 (44%), Gaps = 41/380 (10%)
Query: 15 GGLEKYAYMIARGLVERGWEVKVITAS----RKGNSLENLEGIEVIRLA-PHFIVSNTPI 69
GG+EK Y I R L ERG +V G ++GI+ + P I N
Sbjct: 41 GGVEKRVYEIGRRLAERGHDVHWYCVGWWLPDNGERTIEIDGIKYHAVCEPLEIYVNGRR 100
Query: 70 SFNLPLK----LIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDL 125
S +K L + E+F +I+ PY++ SA + +++ S+ VL Y D
Sbjct: 101 SIKAAIKFSISLTRPLLREKFDIIDCQQ-FPYFSCFSAKLASLVNKSSLIITVLEYWGDY 159
Query: 126 VKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTE 185
E L KV + + L SD I S Y L K + +P GV
Sbjct: 160 WYEY--LGKVGIFGKIVERLTFNLTSDYITISSHVRNY----LSFCKDSIHIVPDGVPFN 213
Query: 186 RYFPGKSYRLHSIYNLPRSAKI-VMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVL 244
+ K P S K ++F+G + + HK V LLKA + ++
Sbjct: 214 KIRKIK----------PSSEKANLIFVGRLIK---HKNVDVLLKALHLLRDDGFKLTCII 260
Query: 245 VGRGDMIPEYKKMCMSLGISKRVIFTGYV-EEDILPEFYRSSDVIVLPSTTVQEGFGMVL 303
+G G K+ LG+ +V F G V +D + ++ +S ++ V PS+ +EG G+V
Sbjct: 261 IGDGPEKENLMKITRDLGLEAQVKFMGRVPSDDEVYKYMKSCNIFVFPSS--REGAGLVT 318
Query: 304 IEAGASGKPVIGTN--VGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGK 361
+EA A+G PVI TN + + +I NGK G+L DP L E I+ ++ N K+ K
Sbjct: 319 LEANAAGLPVITTNHKLNASRELI-NGKNGVLF-NLDPHDLKEKIILIM---NEHEKLRK 373
Query: 362 TGRRLVEREYSWDKIVEKTE 381
+ E YSWDKI + TE
Sbjct: 374 DCIKFAE-SYSWDKIADLTE 392
>emb|CAB70927.1| (AL137778) putative sugar transferase [Streptomyces coelicolor
A3(2)]
Length = 387
Score = 92.8 bits (227), Expect = 6e-18
Identities = 92/379 (24%), Positives = 156/379 (40%), Gaps = 31/379 (8%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLEN--LEGIEVIRL 58
M++ ++ PY + GG++ + +A V G EV V+ + L + + +
Sbjct: 1 MRIGIVCPYSWDVPGGVQFHIRDLAEYFVRLGHEVSVLAPADDDTPLPPYVVSAGRAVPV 60
Query: 59 APHFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPV-PYYADVSAWVNNVLKGSNKTPF 117
+ V+ F ++ + E F VI+ H P P ++ W + + P
Sbjct: 61 PYNGSVARLNFGFLSAARVRRWLHEGGFDVIHIHEPTSPSLGLLTCW-------AAQGPI 113
Query: 118 VLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIW 177
V T+H P + LQ L +S I Y L+ +
Sbjct: 114 VATFHTSN-----PRSRAMIAAYAILQAALEKISARIAVSE---YARRTLVEHLGGDAVV 165
Query: 178 IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQV 237
IP GVD + + + + FIG ++ KG+P L++A +
Sbjct: 166 IPNGVDVDFFADAEP-------KPEWQGDTIGFIGRIDE--PRKGLPVLMRALPAILAAR 216
Query: 238 KDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQE 297
+ L++ GRGD + + L RV F G + ++ F RS D+ V P+T E
Sbjct: 217 PQTRLLVAGRGDEEEAVESLPKEL--RSRVEFLGMISDEDKARFLRSVDLYVAPNTG-GE 273
Query: 298 GFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLAR 357
FG+VL+EA ++G PV+ +++ V++ G G L P +D LAEA V LL D
Sbjct: 274 SFGIVLVEAMSAGAPVLASDLDAFAQVLDQGAAGELFPNEDADALAEAAVRLLADPERRA 333
Query: 358 KIGKTGRRLVEREYSWDKI 376
+ + G V R + W +
Sbjct: 334 ALRERGSAHV-RRFDWSTV 351
>sp|P46915|CTSA_BACSU SPORE COAT PROTEIN SA >gi|7427927|pir||A70004 probable
hexosyltransferase (EC 2.4.1.-) ytxN - Bacillus subtilis
>gi|1197085|dbj|BAA06633.1| (D31847) orfX [Bacillus
subtilis] >gi|2293141|gb|AAC00219.1| (AF008220)
similarity with probable lipopolysaccharide
N-acetylglucosaminyltransferase from S. typhimurium
[Bacillus subtilis] >gi|2635575|emb|CAB15069.1| (Z99119)
alternate gene name: ytbA~similar to lipopolysaccharide
N-acetylglucosaminyltransferase [Bacillus subtilis]
Length = 377
Score = 90.9 bits (222), Expect = 2e-17
Identities = 84/292 (28%), Positives = 132/292 (44%), Gaps = 30/292 (10%)
Query: 103 AWVNNVLKGSNKTPFVLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCY 162
+WV + K + F+L+ HN++ F DK+ S G + + + Y
Sbjct: 90 SWVPKLKKQAPDAVFILSVHNEM----FAYDKI------SQAEGEICIDSVAQIVTVSDY 139
Query: 163 YESKLLRRF---KKKLIWIPPGVDTERYFP-----GKSYRLHSIYNLP-RSAKIVMFIGT 213
+ RF + K + GVD + Y P G+ R L KIV+F+G
Sbjct: 140 IGQTITSRFPSARSKTKTVYSGVDLKTYHPRWTNEGQRAREEMRSELGLHGKKIVLFVGR 199
Query: 214 MNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGR---GDM-IPEYKKMCMSLGISKR--V 267
+++ KG LL+A + + D +V +G GD + Y K +LG ++ V
Sbjct: 200 LSKV---KGPHILLQALPDIIEEHPDVMMVFIGSKWFGDNELNNYVKHLHTLGAMQKDHV 256
Query: 268 IFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIEN 327
F +V+ +P Y SDV V S+ QE V EA A+G P+I +N GG VIE
Sbjct: 257 TFIQFVKPKDIPRLYTMSDVFVC-SSQWQEPLARVHYEAMAAGLPIITSNRGGNPEVIEE 315
Query: 328 GKTGILVPP-KDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVE 378
GK G ++ ++P + AE I LL+ ++GK RR E + W ++ E
Sbjct: 316 GKNGYIIHDFENPKQYAERINDLLSSSEKRERLGKYSRREAESNFGWQRVAE 367
>gb|AAC69649.1| (AF019375) GlcNAc transferase [Escherichia coli]
Length = 380
Score = 88.9 bits (217), Expect = 9e-17
Identities = 79/307 (25%), Positives = 142/307 (45%), Gaps = 26/307 (8%)
Query: 94 PVPYYADVSAWVNNVLKGSNKTPFVLTYHNDL-----VKEGFPLDKVAYLYNLSLQRGLL 148
PVPY + +N K ++ V+ HN + ++ P ++ + + + G L
Sbjct: 81 PVPYSQRI---LNTQPKNTDPKDSVIVIHNSMKLYKQIRSRSPHAQLVMHLHNAFEPGEL 137
Query: 149 LLSDTIITPSPYCY--YESKLLRRFKKKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSAK 206
+ II PS + + Y K+ + +P G +E Y + L N+ +
Sbjct: 138 DKNAKIIVPSQFLFDFYSEKMP---DANIAIVPNGFCSESYEQNNTEDLRQKLNIDANDT 194
Query: 207 IVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVG------RGDMIPEYKKMC-M 259
+++F G ++ KG L++AF + + LV+VG +G+ + KK+
Sbjct: 195 VLLFAGRIS---PDKGCLMLMEAFNQLNKIQDNLKLVIVGDPFASKKGEKVEYQKKVLDA 251
Query: 260 SLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVG 319
+ I + I G + + +YR +D++V+PS V+E F MV +EA A+GKPV+ + G
Sbjct: 252 AKAIGAQCIMAGGQPPEQMHNYYRLADLVVVPSQ-VEEAFCMVAVEAMAAGKPVLASQKG 310
Query: 320 GIKHVIENGKTGI-LVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVE 378
GI + G TG L P + I +L D + A +I K R V +YSW+ + +
Sbjct: 311 GISEFVLEGITGYHLAEPMTSESILADIKRVLADADRA-QIAKNARNFVFSKYSWEHVTQ 369
Query: 379 KTEIALK 385
+ E ++
Sbjct: 370 RFEAQIQ 376
>gb|AAG18700.1| (AE004975) LPS biosynthesis protein; Lpb [Halobacterium sp. NRC-1]
Length = 338
Score = 88.9 bits (217), Expect = 9e-17
Identities = 98/372 (26%), Positives = 172/372 (45%), Gaps = 45/372 (12%)
Query: 24 IARGLVERGWEVKVITASRKGNSL---ENLEGIEVIRLAPHFIVSNTPISFNLPLKLIKV 80
++R G +V V+T + +SL E +G V+R P + IS + K ++
Sbjct: 1 MSRDQAAMGHDVTVLTVT-DDDSLPRHEQRDGYTVVRRKPTVELLGNEISAGVA-KFLR- 57
Query: 81 FKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVKEGFPLDKVAYLYN 140
+ F V++AH+ + + +++A + +TP +T H L + P + + Y
Sbjct: 58 -NADDFDVVHAHSHLYFSTNLAALKRRL----GETPLAITNHG-LYSQNAP-EWLFDAYL 110
Query: 141 LSLQRGLLLLSDTIITPSPYCYYES--KLLRRF--KKKLIWIPPGVDTERYFP-GKSYRL 195
++ R +D + +CY + + +R F ++ +P GVDTER+ P G + L
Sbjct: 111 KTVGRWTFNQADVV-----FCYTDEDRERVREFGVDSRIEVVPNGVDTERFTPDGPTSDL 165
Query: 196 HSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYK 255
+ +V+F+G + G + +KA VA + D L +VG G M E +
Sbjct: 166 -----IDHDGPVVLFVGRLVEGKRPQDA---VKAVSRVAEDM-DVKLYVVGDGPMREELE 216
Query: 256 KMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIG 315
+M + +F G + D +P YR+ DV+VLPS EG ++E ASG PV+
Sbjct: 217 EMS-----GEETVFLGQLPYDEMPAVYRAGDVLVLPSRA--EGLPRTVLEGFASGVPVVA 269
Query: 316 TNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDK 375
+N+ K VI+ G + V D + A AI ++ D R+ + GR +V + + W
Sbjct: 270 SNLEHTKAVIQKGGQTVDVGNVDGY--ARAIQEVIDD----RETRQVGRGVVVKTFQWKD 323
Query: 376 IVEKTEIALKAI 387
T L+A+
Sbjct: 324 TARTTTEILQAV 335
>dbj|BAB07431.1| (AP001519) unknown conserved protein [Bacillus halodurans]
Length = 395
Score = 88.5 bits (216), Expect = 1e-16
Identities = 84/364 (23%), Positives = 173/364 (47%), Gaps = 35/364 (9%)
Query: 33 WEVKVITASRKGNSLENLEGIEVIRLAPHFIVSNTPISFNLPLKLIK--VFKEEQFSVIN 90
+++ ++TA + + N ++++ L F + + + L+++ + +++S+I+
Sbjct: 39 YKLTILTAFKSSKTEANTF-LDIVPLGTDFTQKKSIVFYVFCLRVLLWLILNRKKYSIIH 97
Query: 91 AHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDL----VKEGFPLDKVAYLYNLSLQRG 146
P + N V K +K V ++L VKE L KV+ + L R
Sbjct: 98 CIKAGPE----AVVANIVSKLLDKRLIVKVAQDELSDREVKEATSLKKVSRISRQILLRT 153
Query: 147 LLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERYFPGKSYRLHSI---YNLPR 203
+ D I S + + K K+I IP GVD +R+ P +I LP
Sbjct: 154 V----DNFIAISEEIDHNLQKRVSKKSKIIKIPNGVDDKRFAPVDCTTKRAIRRNLELPV 209
Query: 204 SAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVL------VGRGDMIPEYKKM 257
+++F G +N+ KG+ LL A + V T+ S ++ + + + E K
Sbjct: 210 ERVLILFAGAINK---RKGIVDLLDAVQKVKTKNHYSLVICGPILEDINFEERVQEINKT 266
Query: 258 CMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTN 317
+ ++I+ G V + + ++ +SD+ VLPS + EG VL+EAG++G +I T+
Sbjct: 267 NKKI----KIIYKGVVTD--IEKYMAASDIFVLPSYS--EGLPNVLLEAGSTGLALITTD 318
Query: 318 VGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIV 377
+GG + ++ +G+ G ++P LA+ + L+ ++++ ++G R ++E +S + +
Sbjct: 319 IGGSRDIVIDGRNGFVIPTNSSDLLAKKMELLIDNEDIRERMGDETRSVIENNFSLEFVA 378
Query: 378 EKTE 381
++ E
Sbjct: 379 KEYE 382
>gb|AAC98618.1| (AF047478) mannosyltransferase; WbkA [Brucella melitensis]
Length = 376
Score = 87.8 bits (214), Expect = 2e-16
Identities = 101/390 (25%), Positives = 169/390 (42%), Gaps = 71/390 (18%)
Query: 16 GLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRL------APHFIVSNTPI 69
G+ +Y R L ERG E+ + T + L + EG + R+ A S T +
Sbjct: 20 GISRYVMENCRELYERGHELVLYTPEKPRVQLSSSEGFD-FRVSNFQGPAGRLFWSQTVL 78
Query: 70 SFNLPLKLIKVF----------KEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVL 119
L I VF K SV++ H V YYA
Sbjct: 79 PLQLRKDRIDVFWGPAHRLPALKGAIPSVVSIHDLVWYYAS------------------- 119
Query: 120 TYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYE--SKLLRRFKKKLIW 177
+ + +G+ D+ L +G L +D I+ S Y S + ++ K+
Sbjct: 120 ---STMRLQGWLADRF-------LMKGALRNADQIVAVS-YATSSAISSVFPQYTSKIQM 168
Query: 178 IPPGVDTERYFPG----KSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYV 233
+ PGV K +R++ Y L FIGT+ K + LL+A+ +
Sbjct: 169 VYPGVSHFNRIGTSNILKEHRINKSYGL--------FIGTLE---PRKNLIRLLEAYANL 217
Query: 234 ATQVKDSYLVLV--GRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLP 291
V++++L++V G+G + + K LGI++ TGYV + L + YR++ +++P
Sbjct: 218 PECVRNNFLLVVAGGKGWNLGDIGKTINRLGIAEYTRLTGYVTDSDLNDLYRNARTLLMP 277
Query: 292 STTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLT 351
S + EGFG+ +IEA A G PVI +N + V G ILV P + ++ A+ + T
Sbjct: 278 S--LYEGFGLPIIEAQAYGVPVITSNCSSMPEVA--GDAAILVDPLNVAEISNALYRIAT 333
Query: 352 DDNLARKIGKTGRRLVEREYSWDKIVEKTE 381
D+ L ++ + +ER ++W +EK E
Sbjct: 334 DNKLWQRKSLLALQNIER-FNWHNSIEKLE 362
>pir||S74777 hypothetical protein slr1076 - Synechocystis sp. (strain PCC 6803)
>gi|1652002|dbj|BAA16928.1| (D90901) hypothetical
protein [Synechocystis sp.]
Length = 381
Score = 87.8 bits (214), Expect = 2e-16
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 3/179 (1%)
Query: 173 KKLIWIPPGVDTERY-FPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFK 231
+K++ +P DT R+ K L YNL ++++ I + +KG +++A
Sbjct: 163 EKVVVLPNTFDTSRFQIAPKPQSLLEKYNLTPDQQVILTIARLAGEERYKGYDQIIRALP 222
Query: 232 YVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLP 291
+ + + + ++ G+G P +K+ L + V G++ ++ L + Y DV +P
Sbjct: 223 EIIKTIPNIHYLIGGKGGDRPRIEKLIQDLDLEDYVTLAGFIPDEELADHYNLCDVFAMP 282
Query: 292 STTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLL 350
S EGFG+V +EA A GKP IG N G + NG+ G+LV P D ++ I +L
Sbjct: 283 SKG--EGFGIVYLEAMACGKPTIGGNQDGAIDALCNGELGVLVNPDDLDEISTVITQIL 339
>dbj|BAA23228.1| (AB000126) mannosyl transferase [Klebsiella pneumoniae]
>gi|3142187|dbj|BAA28307.1| (AB009328) mannosyl
transferase [Klebsiella pneumoniae]
>gi|3142190|dbj|BAA28309.1| (AB009329) mannosyl
transferase [Klebsiella pneumoniae]
>gi|3142193|dbj|BAA28311.1| (AB009330) mannosyl
transferase [Klebsiella pneumoniae]
>gi|3142196|dbj|BAA28313.1| (AB009331) mannosyl
transferase [Klebsiella pneumoniae]
>gi|3142199|dbj|BAA28315.1| (AB009332) mannosyl
transferase [Klebsiella pneumoniae]
>gi|3142202|dbj|BAA28317.1| (AB009333) mannosyl
transferase [Klebsiella pneumoniae]
>gi|3142205|dbj|BAA28319.1| (AB009334) mannosyl
transferase [Klebsiella pneumoniae]
Length = 274
Score = 87.8 bits (214), Expect = 2e-16
Identities = 69/262 (26%), Positives = 121/262 (45%), Gaps = 17/262 (6%)
Query: 118 VLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIW 177
V+TYH+D+VK+ ++ LY LQ L D I+ SP S+ L++++ K +
Sbjct: 15 VVTYHSDIVKQ----KRLMKLYQ-PLQERFLASVDCIVASSPNYVASSQTLKKYQDKTVV 69
Query: 178 IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQV 237
IP G++ H + +F+G +KG+ LL A + V
Sbjct: 70 IPFGLEQHDVQHDPQRVAH--WRETVGDNFFLFVGAFRY---YKGLHILLDAAERSRLPV 124
Query: 238 KDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQE 297
V+VG G + E ++ G+S V+FTG + ++ ++ +V PS E
Sbjct: 125 -----VIVGGGPLEAEVRREAQQRGLSN-VVFTGMLNDEDKYILFQLCRGVVFPSHLRSE 178
Query: 298 GFGMVLIEAGASGKPVIGTNVG-GIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLA 356
FG+ L+E +P+I +G G + ++ G ++PP D L EA+ L +D A
Sbjct: 179 AFGITLLEGARFARPLISCEIGTGTSFINQDKVNGCVIPPNDSQALVEAMNELWHNDETA 238
Query: 357 RKIGKTGRRLVEREYSWDKIVE 378
+ G+ RR E ++ D +++
Sbjct: 239 SRYGENSRRRFEEMFTADHMID 260
>emb|CAB50741.1| (AJ243803) putative glycosyl transferase [Streptomyces coelicolor
A3(2)] >gi|6522847|emb|CAB61928.1| (AL133278) putative
glycosyl transferase [Streptomyces coelicolor A3(2)]
Length = 387
Score = 87.8 bits (214), Expect = 2e-16
Identities = 88/315 (27%), Positives = 144/315 (44%), Gaps = 42/315 (13%)
Query: 88 VINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVKEGFPLDKVAYLYNLS--LQR 145
++++HT +YA++ + +L G P V+T H+ + +++ Y LS +R
Sbjct: 82 LVHSHT---WYANLGGHLAKLLHG---VPHVVTAHSLEPLRPWKAEQLGGGYELSGWAER 135
Query: 146 GLLLLSDTIITPSPY-------CYYESKLLRRFKKKLIWIPPGVDTERYFPGKSYRLHSI 198
+D +I S CY + R + + G+DT Y P +
Sbjct: 136 TAFEAADAVIAVSGAMREDILGCYPDLDASR-----VHVVHNGIDTRLYRPDHGTDVLDR 190
Query: 199 YNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMC 258
L RS V+F+G + R KGVP LL+A + + + +VL PE +
Sbjct: 191 VGLDRSRPYVLFVGRITR---QKGVPQLLRAVRDIDPAAQ---VVLCAGAPDTPEIDQEF 244
Query: 259 MSL--GISKRVIFTGYVEEDILP-----EFYRSSDVIVLPSTTVQEGFGMVLIEAGASGK 311
L G+S+ ++ +LP + + V V PS V E G+V +EA A G
Sbjct: 245 RDLFAGLSRAREGVHWIPR-MLPRTEVIQLLTHAAVFVCPS--VYEPLGIVNLEAMACGT 301
Query: 312 PVIGTNVGGIKHVIENGKTGILVPPKD------PFRLAEAIVTLLTDDNLARKIGKTGRR 365
PV+ + VGGI V+ +G TG+LVP +D LA A+ ++L D AR++G+ GR
Sbjct: 302 PVVASRVGGIPEVVTDGVTGVLVPREDGADDAFEAGLARALDSVLGDPAGARRMGEAGRA 361
Query: 366 LVEREYSWDKIVEKT 380
E+ WD + +T
Sbjct: 362 RAVEEFGWDAVARRT 376
>pir||C70036 capsular polysaccharide biosynthesis homolog yveN - Bacillus
subtilis >gi|1495282|emb|CAA96471.1| (Z71928)
hypothetical protein [Bacillus subtilis]
>gi|1945693|emb|CAB08026.1| (Z94043) hypothetical
protein [Bacillus subtilis] >gi|2635947|emb|CAB15439.1|
(Z99121) similar to capsular polysaccharide biosynthesis
[Bacillus subtilis]
Length = 381
Score = 87.4 bits (213), Expect = 3e-16
Identities = 91/356 (25%), Positives = 162/356 (44%), Gaps = 26/356 (7%)
Query: 30 ERGWEVKVITASRKGNSLENLEGIEVIRLAPHFIVSNTPISFNLPLKLIKVFKEEQFSVI 89
+ GWEV V + + + IR +P P + + +L KV ++ ++
Sbjct: 28 QMGWEVHVAANGQTKLPYVDEKFSIPIRRSPF-----DPQNLAVYRQLKKVIDTYEYDIV 82
Query: 90 NAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLL 149
+ HTPV V A + + T + T H +G P+ +L +++ L
Sbjct: 83 HCHTPV---GGVLARLAARQARRHGTKVLYTAHGFHFCKGAPMKN--WLLYYPVEKWLSA 137
Query: 150 LSDTIITPSPYCYYESKLLRR---FKKKLIWIPPGVDTERYFPG---KSYRLHSIYNLPR 203
+D +IT + Y +K L+R +K+ I GV+TER+ P + RL +
Sbjct: 138 YTDCLITINEEDYIRAKGLQRPGGRTQKIHGI--GVNTERFRPVSPIEQQRLREKHGFRE 195
Query: 204 SAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGI 263
I+++ +N +K L++A + ++ LV G G M Y+ + LG
Sbjct: 196 DDFILVYPAELN---LNKNQKQLIEAAALLKEKIPSLRLVFAGEGAMEHTYQTLAEKLGA 252
Query: 264 SKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKH 323
S V F G+ + + E + +DV V +++++EG GM ++E A+ +P I T+ G +
Sbjct: 253 SAHVCFYGFCSD--IHELIQLADVSV--ASSIREGLGMNVLEGMAAEQPAIATDNRGHRE 308
Query: 324 VIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEK 379
+I +G+ G L+ D A I L L RK+G+ GR+ R +S + VE+
Sbjct: 309 IIRDGENGFLIKIGDSAAFARRIEQLYHKPELCRKLGQEGRKTALR-FSEARTVEE 363
>pir||I76777 Mannosyltransferase (EC 5.-.-.-) C - Escherichia coli
>gi|598472|dbj|BAA07752.1| (D43637) mannosyltransferase
C [Escherichia coli]
Length = 274
Score = 87.0 bits (212), Expect = 3e-16
Identities = 67/262 (25%), Positives = 122/262 (45%), Gaps = 17/262 (6%)
Query: 118 VLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIW 177
V+TYH+D+VK+ ++ LY LQ L D I+ SP S+ L++++ K +
Sbjct: 15 VVTYHSDIVKQ----KRLMKLYQ-PLQERFLASVDCIVASSPNYVASSQTLKKYQDKTVV 69
Query: 178 IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQV 237
IP G++ H + +F+G +KG+ LL A + V
Sbjct: 70 IPFGLEQHDVQHDSQRVAH--WRETVGDNFFLFVGAFRY---YKGLHILLDAAERSRLPV 124
Query: 238 KDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQE 297
V+VG G + E ++ G+S V+FTG + ++ ++ +V PS E
Sbjct: 125 -----VIVGGGPLEAEVRREAQQRGLSN-VVFTGMLNDEDKYILFQLCRGVVFPSHLRSE 178
Query: 298 GFGMVLIEAGASGKPVIGTNVG-GIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLA 356
FG+ L+E +P+I +G G + ++ +G ++PP D L EA+ L ++ +
Sbjct: 179 AFGITLLEGARFARPLISCEIGTGTSFINQDKVSGCVIPPNDSQALVEAMNELWNNEETS 238
Query: 357 RKIGKTGRRLVEREYSWDKIVE 378
+ G+ RR E ++ D +++
Sbjct: 239 NRYGENSRRRFEEMFTADHMID 260
>dbj|BAA28303.1| (AB009326) mannosyl transferase [Escherichia coli]
Length = 274
Score = 87.0 bits (212), Expect = 3e-16
Identities = 68/262 (25%), Positives = 124/262 (46%), Gaps = 17/262 (6%)
Query: 118 VLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIW 177
V+TYH+D+VK+ ++ LY LQ L D I+ SP S+ L+++ K +
Sbjct: 15 VVTYHSDIVKQ----KRLMKLYQ-PLQERFLSGVDCIVASSPNYVASSQTLKKYLDKTVV 69
Query: 178 IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQV 237
IP G++ + H + K +F+GT +KG+ L+ A + V
Sbjct: 70 IPFGLEQQDVQHDPQRVAH--WRETVGDKFFLFVGTFRY---YKGLHILMDAAERSRLPV 124
Query: 238 KDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQE 297
V+VG G + E ++ G+S V+FTG + ++ ++ +V PS E
Sbjct: 125 -----VVVGGGPLESEVRREAQQRGLSN-VMFTGMLNDEDKYILFQLCRGVVFPSHLRSE 178
Query: 298 GFGMVLIEAGASGKPVIGTNVG-GIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLA 356
FG+ L+E +P+I +G G + ++ +G ++PP D L EA+ L ++ +
Sbjct: 179 AFGITLLEGARFARPLISCEIGTGTSFINQDKVSGCVIPPNDSQALVEAMNELWNNEETS 238
Query: 357 RKIGKTGRRLVEREYSWDKIVE 378
+ G+ RR E ++ D +++
Sbjct: 239 NRYGENSRRRFEEMFTADHMID 260
>dbj|BAA28289.1| (AB009319) mannosyl transferase [Escherichia coli]
>gi|3142163|dbj|BAA28291.1| (AB009320) mannosyl
transferase [Escherichia coli]
>gi|3142166|dbj|BAA28293.1| (AB009321) mannosyl
transferase [Escherichia coli]
>gi|3142169|dbj|BAA28295.1| (AB009322) mannosyl
transferase [Escherichia coli]
Length = 274
Score = 86.6 bits (211), Expect = 4e-16
Identities = 67/262 (25%), Positives = 122/262 (45%), Gaps = 17/262 (6%)
Query: 118 VLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIW 177
V+TYH+D+VK+ ++ LY LQ L D I+ SP S+ L++++ K +
Sbjct: 15 VVTYHSDIVKQ----KRLMKLYQ-PLQERFLASVDCIVASSPNYVASSQTLKKYQDKTVV 69
Query: 178 IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQV 237
IP G++ H + +F+G +KG+ LL A + V
Sbjct: 70 IPFGLEQHDVQHDPQRVAH--WRETVGDNFFLFVGAFRY---YKGLHILLDAAERSRLPV 124
Query: 238 KDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQE 297
V+VG G + E ++ G+S V+FTG + ++ ++ +V PS E
Sbjct: 125 -----VIVGGGPLEAEVRREAQQRGLSN-VVFTGMLNDEDKYILFQLCRGVVFPSHLRSE 178
Query: 298 GFGMVLIEAGASGKPVIGTNVG-GIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLA 356
FG+ L+E +P+I +G G + ++ +G ++PP D L EA+ L ++ +
Sbjct: 179 AFGITLLEGARFARPLISCEIGTGTSFINQDKVSGCVIPPNDSQALVEAMNELWNNEETS 238
Query: 357 RKIGKTGRRLVEREYSWDKIVE 378
+ G+ RR E ++ D +++
Sbjct: 239 NRYGENSRRRFEEMFTADHMID 260
>dbj|BAA28297.1| (AB009323) mannosyl transferase [Escherichia coli]
>gi|3142175|dbj|BAA28299.1| (AB009324) mannosyl
transferase [Escherichia coli]
>gi|3142178|dbj|BAA28301.1| (AB009325) mannosyl
transferase [Escherichia coli]
Length = 274
Score = 86.6 bits (211), Expect = 4e-16
Identities = 69/265 (26%), Positives = 131/265 (49%), Gaps = 23/265 (8%)
Query: 118 VLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIW 177
V+TYH+D+VK+ ++ LY LQ L D I+ SP S+ L+++ K +
Sbjct: 15 VVTYHSDIVKQ----KRLMKLYQ-PLQERFLSGVDCIVASSPNYVASSQTLKKYLDKTVV 69
Query: 178 IPPGVDTE--RYFPGK-SYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVA 234
IP G++ + ++ P + +Y ++ + K +F+GT +KG+ L+ A +
Sbjct: 70 IPFGLEQQDVQHDPQRVAYWRETVGD-----KFFLFVGTFRY---YKGLHILMDAAERSR 121
Query: 235 TQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTT 294
V V+VG G + E ++ G+S V+FTG + ++ ++ +V PS
Sbjct: 122 LPV-----VVVGGGPLESEVRREAQQRGLSN-VMFTGMLNDEDKYILFQLCRGVVFPSHL 175
Query: 295 VQEGFGMVLIEAGASGKPVIGTNVG-GIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDD 353
E FG+ L+E +P+I +G G + ++ +G ++PP D L EA+ L ++
Sbjct: 176 RSEAFGITLLEGARFARPLISCEIGTGTSFINQDKVSGCVIPPNDSQALVEAMNELWNNE 235
Query: 354 NLARKIGKTGRRLVEREYSWDKIVE 378
+ + G+ RR E ++ D +++
Sbjct: 236 ETSNRYGENSRRRFEEMFTADHMID 260
>dbj|BAA28305.1| (AB009327) mannosyl transferase [Escherichia coli]
Length = 274
Score = 86.2 bits (210), Expect = 6e-16
Identities = 68/262 (25%), Positives = 123/262 (45%), Gaps = 17/262 (6%)
Query: 118 VLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIW 177
V+TYH+D+VK+ ++ LY LQ L D I+ SP S+ L+++ K +
Sbjct: 15 VVTYHSDIVKQ----KRLMKLYQ-PLQERFLSGVDCIVASSPNYVASSQTLKKYLDKTVV 69
Query: 178 IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQV 237
IP G++ H + K +F+GT +KG+ L+ A + V
Sbjct: 70 IPFGLEQHDVQHDPQRVAH--WRETVGDKFFLFVGTFRY---YKGLHILMDAAECSRLPV 124
Query: 238 KDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQE 297
V+VG G + E ++ G+S V+FTG + ++ ++ +V PS E
Sbjct: 125 -----VVVGGGPLESEVRREAQQRGLSN-VMFTGMLNDEDKYILFQLCRGVVFPSHLRSE 178
Query: 298 GFGMVLIEAGASGKPVIGTNVG-GIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLA 356
FG+ L+E +P+I +G G + ++ +G ++PP D L EA+ L ++ +
Sbjct: 179 AFGITLLEGARFARPLISCEIGTGTSFINQDKVSGCVIPPNDSQALVEAMNELWNNEETS 238
Query: 357 RKIGKTGRRLVEREYSWDKIVE 378
+ G+ RR E ++ D +++
Sbjct: 239 NRYGENSRRRFEEMFTADHMID 260
>sp|P26470|RFAK_SALTY LIPOPOLYSACCHARIDE 1,2-N-ACETYLGLUCOSAMINETRANSFERASE
>gi|96829|pir||C41317 probable lipopolysaccharide
N-acetylglucosaminyltransferase (EC 2.4.1.56) -
Salmonella typhimurium >gi|454851|gb|AAA27207.1|
(M73826) N-acetylglucosamine transferase [Salmonella
typhimurium]
Length = 381
Score = 85.4 bits (208), Expect = 1e-15
Identities = 82/307 (26%), Positives = 137/307 (43%), Gaps = 26/307 (8%)
Query: 94 PVPYYADVSAWVNNVLKGSNKTPFVLTYHNDL-----VKEGFPLDKVAYLYNLSLQRGLL 148
P+PY + +N K + + V+ HN + ++E P K+ + + + L
Sbjct: 81 PLPYSQRI---LNIRDKVTTQEDSVIVIHNSMKLYRQIRERNPNAKLVMHMHNAFEPELP 137
Query: 149 LLSDTIITPSPY--CYYESKLLRRFKKKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSAK 206
II PS + +YE +L + +P G E Y L N+ A
Sbjct: 138 DNDAKIIVPSQFLKAFYEERLPAA---AVSIVPNGFCAETYKRNPQDNLRQQLNIAEDAT 194
Query: 207 IVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVG-----RGDMIPEYKKMCMSL 261
++++ G ++ KG+ LL+AFK + T + LV+VG R EY+K +
Sbjct: 195 VLLYAGRIS---PDKGILLLLQAFKQLRTLRSNIKLVVVGDPYASRKGEKAEYQKKVLDA 251
Query: 262 G--ISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVG 319
I I G D + FY +D++++PS V+E F MV +EA A+GK V+ + G
Sbjct: 252 AKEIGTDCIMAGGQSPDQMHNFYHIADLVIVPSQ-VEEAFCMVAVEAMAAGKAVLASKKG 310
Query: 320 GIKHVIENGKTGI-LVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVE 378
GI + +G TG L P + I L D +I + + LV +YSW+ + +
Sbjct: 311 GISEFVLDGITGYHLAEPMSSDSIINDINRALADKE-RHQIAEKAKSLVFSKYSWENVAQ 369
Query: 379 KTEIALK 385
+ E +K
Sbjct: 370 RFEEQMK 376
>gb|AAB08106.1| (U68035) HepB [Anabaena sp.]
Length = 389
Score = 85.4 bits (208), Expect = 1e-15
Identities = 56/214 (26%), Positives = 105/214 (48%), Gaps = 6/214 (2%)
Query: 174 KLIWIPPGVDTERYFPGKS-YRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKY 232
K+ IP GV+ +++ P S + N P S I+ T R GV LL+A
Sbjct: 181 KIHIIPGGVNIDKFQPNLSRQQARQQLNWPESRPILF---TSRRLVHRVGVDKLLQALAI 237
Query: 233 VATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPS 292
+ ++ D +L + GRG + +K LG+ V F G++ ++ LP Y+++++ V+PS
Sbjct: 238 IKPKLPDIWLAIAGRGHLQTTLEKQAQELGLENNVKFLGFLPDEQLPIAYQAANLTVMPS 297
Query: 293 TTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTD 352
+ EGFG+ + E+ A G PV+ T +GG+ ++ ++ + +AE I +L
Sbjct: 298 QSF-EGFGLAITESLACGTPVLCTPIGGMPEILTPFSPQLITASPEATAIAEKIAQILL- 355
Query: 353 DNLARKIGKTGRRLVEREYSWDKIVEKTEIALKA 386
+ + + + R+ + W KI ++ + A
Sbjct: 356 EQIPKPSREECRQYAVTNFDWQKIAQQVRQVILA 389
>emb|CAB57789.1| (AJ250131) HepD protein [Anabaena PCC7120]
Length = 391
Score = 85.4 bits (208), Expect = 1e-15
Identities = 56/214 (26%), Positives = 105/214 (48%), Gaps = 6/214 (2%)
Query: 174 KLIWIPPGVDTERYFPGKS-YRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKY 232
K+ IP GV+ +++ P S + N P S I+ T R GV LL+A
Sbjct: 181 KIHIIPGGVNIDKFQPNLSRQQARQQLNWPESRPILF---TSRRLVHRVGVDKLLQALAI 237
Query: 233 VATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPS 292
+ ++ D +L + GRG + +K LG+ V F G++ ++ LP Y+++++ V+PS
Sbjct: 238 IKPKLPDIWLAIAGRGHLQTTLEKQAQELGLENNVKFLGFLPDEQLPIAYQAANLTVMPS 297
Query: 293 TTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTD 352
+ EGFG+ + E+ A G PV+ T +GG+ ++ ++ + +AE I +L
Sbjct: 298 QSF-EGFGLAITESLACGTPVLCTPIGGMPEILTPFSPQLITASPEATAIAEKIAQILL- 355
Query: 353 DNLARKIGKTGRRLVEREYSWDKIVEKTEIALKA 386
+ + + + R+ + W KI ++ + A
Sbjct: 356 EQIPKPSREECRQYAVTNFDWQKIAQQVRQVILA 389
>gb|AAF04385.1|AF189151_8 (AF189151) WbdC; mannosyl transferase C [Klebsiella pneumoniae]
Length = 274
Score = 85.4 bits (208), Expect = 1e-15
Identities = 73/265 (27%), Positives = 123/265 (45%), Gaps = 23/265 (8%)
Query: 118 VLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIW 177
V+TYH+D+VK+ ++ LY LQ L D I+ SP S+ L++++ K +
Sbjct: 15 VVTYHSDIVKQ----KRLMKLYQ-PLQERFLASVDCIVASSPNYVASSQTLKKYQDKTVV 69
Query: 178 IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQV 237
IP G++ H + +F+G +KG+ LL A + V
Sbjct: 70 IPFGLEQHDVQHDPQRVAH--WRETVGDNFFLFVGAFRY---YKGLHILLDAAERNRLPV 124
Query: 238 KDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTG---YVEEDILPEFYRSSDVIVLPSTT 294
V+VG G + E ++ G+S V+FTG Y ++ IL + R +V PS
Sbjct: 125 -----VIVGGGPLDAEVRREAPQRGLSN-VVFTGMLNYEDKYILFQLCRG---VVFPSHL 175
Query: 295 VQEGFGMVLIEAGASGKPVIGTNVG-GIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDD 353
E FG+ L+E +P+I +G G + ++ G ++PP D L EA+ L +D
Sbjct: 176 RSEAFGITLLEGARFARPLISCEIGTGTSFINQDKVNGCVIPPNDSQALVEAMNELWHND 235
Query: 354 NLARKIGKTGRRLVEREYSWDKIVE 378
A + G+ RR E ++ D +++
Sbjct: 236 ETASRYGENSRRRFEEMFTADHMID 260
>pir||T40367 n-acetylglucosaminyl-phosphatidylinositol - fission yeast
(Schizosaccharomyces pombe) >gi|2117303|emb|CAB09127.1|
(Z95620) n-acetylglucosaminyl-phosphatidylinositol
[Schizosaccharomyces pombe]
Length = 456
Score = 84.7 bits (206), Expect = 2e-15
Identities = 98/388 (25%), Positives = 174/388 (44%), Gaps = 40/388 (10%)
Query: 5 MITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNS----LENLEGIEVIRLAP 60
M++ +F+P+ GG+E + + +++ L++ G +V VIT + K L N G+ V +
Sbjct: 1 MVSDFFFPQPGGIESHIFQLSQRLIDLGHKVIVITHAYKDRVGVRYLTN--GLTVYYVPL 58
Query: 61 HFIVSNT--PISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFV 118
H + T P F+ + E +++ H + + + +L +T +
Sbjct: 59 HTVYRETTFPSFFSFFPIFRNIVIRENIEIVHGHGSLSFLCH-----DAILHA--RTMGL 111
Query: 119 LTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDT--IITPSPYCYYESKLLRRF--KKK 174
T D GF D + + N L+ +SD +I S C E+ +LR K+
Sbjct: 112 KTCFTDHSLFGFA-DAGSIVTNKLLK---FTMSDVNHVICVSHTCR-ENTVLRAVLNPKR 166
Query: 175 LIWIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVA 234
+ IP + E + P S +++K + I ++R + +KG+ L+ +
Sbjct: 167 VSVIPNALVAENFQPDPS----------KASKDFLTIVVISRLYYNKGIDLLIAVIPRIC 216
Query: 235 TQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTT 294
Q V+ G G + ++M + RV G V D + + + + PS T
Sbjct: 217 AQHPKVRFVIAGDGPKSIDLEQMREKYMLQDRVEMLGSVRHDQVRDVMVRGHIYLHPSLT 276
Query: 295 VQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDN 354
E FG VL+EA + G VI T VGG+ V+ + T P +D LA+ + +++T D
Sbjct: 277 --EAFGTVLVEAASCGLYVISTKVGGVPEVLPSHMTRFARPEEDD--LADTLSSVIT-DY 331
Query: 355 LARKI-GKTGRRLVEREYSWDKIVEKTE 381
L KI +T V++ YSW + E+TE
Sbjct: 332 LDHKIKTETFHEEVKQMYSWIDVAERTE 359
>dbj|BAB03209.1| (AB046360) putative glycosyltransferase [Actinobacillus
actinomycetemcomitans]
Length = 390
Score = 84.7 bits (206), Expect = 2e-15
Identities = 73/254 (28%), Positives = 120/254 (46%), Gaps = 12/254 (4%)
Query: 128 EGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERY 187
E P ++V YL + L R + L S + KL + K++ + PGVDT
Sbjct: 138 EFHPEERVKYLTS-ELPRTVRLSSIIFVDSDAIAVELKKLYPMYSNKVVTLYPGVDTSFK 196
Query: 188 FPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSY-LVLVG 246
+ S + L + ++ + T+ K + L++A+K + +K+ Y LVLVG
Sbjct: 197 QYENCNDVLSSFGL-KDKSFILSVCTLE---PRKNLLRLVEAYKLLPESMKEEYPLVLVG 252
Query: 247 -RGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIE 305
+G E L K++I T Y+ +D++ + Y S+ + PS + EGFG+ ++E
Sbjct: 253 DQGWKNSELFNSAKELFDKKQLIMTKYISDDLVKKIYSSAAIFAYPS--LYEGFGLPIVE 310
Query: 306 AGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRR 365
A ASG VI +N G + V G + +LV P L +AI+ LLTD G
Sbjct: 311 AMASGTAVITSNYGAMAEVA--GDSAVLVNPHSTEELKDAIINLLTDIKFRNYFIDRGLN 368
Query: 366 LVEREYSWDKIVEK 379
+ +SW+ V+K
Sbjct: 369 RA-KIFSWNNTVDK 381
>gb|AAG19463.1| (AE005039) Vng1059c [Halobacterium sp. NRC-1]
Length = 398
Score = 84.7 bits (206), Expect = 2e-15
Identities = 78/293 (26%), Positives = 122/293 (41%), Gaps = 35/293 (11%)
Query: 85 QFSVINAHTPVPYYADVSAWVNNVLKGSNKT--PFVLTYHNDLVKEGFPLDKVAYLYNLS 142
+ VINAH P A + SN P ++T H + +K+
Sbjct: 118 EIDVINAHFATPTRA-------GAIHASNHAGIPCIVTAHAYEIFRNPDFEKI------- 163
Query: 143 LQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERYFPGKSYRLHSIYNLP 202
R + D ++ PS Y + + IP TE++ P P
Sbjct: 164 --RRICHGVDHVVVPSEYNRQYLRNEAAVTNDISVIPATTKTEKFEPSGE---------P 212
Query: 203 RSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLG 262
+++ T+ R KG Y L+A + Q D ++G+G + P+ K+ LG
Sbjct: 213 VEDRLL----TVARLVEKKGHKYALEAVSQLVAQGYDVEYHIIGQGKLEPQLKQYASDLG 268
Query: 263 ISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEG----FGMVLIEAGASGKPVIGTNV 318
IS V F +V ++ L + + VLP + G +VL EA AS + T+V
Sbjct: 269 ISSHVAFLDHVSDETLRNELNEAALFVLPCVIAENGDRDAMPVVLKEAMASETACVSTSV 328
Query: 319 GGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREY 371
I +I +G+ G+LVPP+D +LA AI LL D L +I GR+ V +
Sbjct: 329 SAIPELITDGEDGLLVPPRDVEQLAAAIQRLLDDPTLRGEIETRGRQTVHETF 381
>gb|AAK42884.1| Glycosyltransferase, putative [Sulfolobus solfataricus]
Length = 349
Score = 82.7 bits (201), Expect = 7e-15
Identities = 97/375 (25%), Positives = 168/375 (43%), Gaps = 59/375 (15%)
Query: 13 EGGGLEKYAYMIARGLVERGWEVKVITASRKG-NSLENLEGIEVIRLAPHFIVSNTPISF 71
+ GG E+ Y I+R LV++G V ++ KG E +E I +IR ++ +
Sbjct: 15 KAGGAEQVIYEISRRLVKKGVSVTWLSEEIKGLPKEEEIENIRIIRRG-----NSITLHL 69
Query: 72 NLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVK-EGF 130
P++ + + + + VP+Y+ L N V H D+VK E
Sbjct: 70 YAPIEA----RRHEIVIDSVAHAVPFYS--------YLVNKNAIALVHHVHQDVVKYELN 117
Query: 131 PLDKVAYLYN---LSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKK---LIWIPPGVDT 184
P+ A ++ +S + ++ +S+T + L+ R K K + I G+D
Sbjct: 118 PIMARAVAFSERSVSNYKSIIAVSNTT---------KRDLVERLKAKEDRIEVIHNGIDH 168
Query: 185 ERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVL 244
Y PGK S +++IG + + +K L A VA +VK + LV+
Sbjct: 169 NIYRPGKK----------ASEPTILWIGRLKK---YKNP---LDAID-VAKRVK-AKLVM 210
Query: 245 VGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLI 304
G GD+ E + ++ + G V E+ Y+S+ ++++ T+ EG+ MV +
Sbjct: 211 AGGGDLENEVVQKIKTINGE----YLGRVSEEDKIRLYQSAWIVIV--TSFIEGWSMVTV 264
Query: 305 EAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGR 364
EA A G PVI N G + +I+NG G +V KD +++ I L+ D+ +++ K+
Sbjct: 265 EANACGTPVIAYNKGSLPEIIKNGVNGYIVNYKDIEAMSKIINELIEDEKRIKELWKSSY 324
Query: 365 RLVEREYSWDKIVEK 379
Y WDK EK
Sbjct: 325 E-ESLNYDWDKSSEK 338
>pir||G75058 probable hexosyltransferase (EC 2.4.1.-) PAB1410 [similarity] -
Pyrococcus abyssi (strain Orsay)
>gi|5458877|emb|CAB50364.1| (AJ248287) LPS BIOSYNTHESIS
RFBU RELATED PROTEIN. [Pyrococcus abyssi]
Length = 368
Score = 82.3 bits (200), Expect = 9e-15
Identities = 104/394 (26%), Positives = 181/394 (45%), Gaps = 49/394 (12%)
Query: 1 MKLLMITPYFYP-EGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLA 59
M++ I YP GG+EK Y I L ++ EV I+ GN + +++ +V R
Sbjct: 1 MRIAYIYDAVYPFVKGGVEKRVYEIGTRLSKKH-EVHWISLDWGGN-IPSIKLQKVGRGV 58
Query: 60 PHFIVSNTPISFNLPLKLIKVFKEE-QFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFV 118
+ I L + K + + +I+ PY S+ V+++L+ P V
Sbjct: 59 SLYSGQRRSIREALYFSAKVLLKAKWDYDIIDCQQ-FPYLPCFSSKVHSILRN---VPMV 114
Query: 119 LTYHNDLVKEGFPLDKVAYLYNLS-----LQRGLLLLSDTIITPSPYCYYESKLLRRFKK 173
+T+H ++ KE + YL N+ +++ + L+ ++ S K LR
Sbjct: 115 ITWH-EIWKEYWK----KYLGNMGAIGIQIEKLMSRLTSHHVSVSKLT---QKRLRSIGI 166
Query: 174 KLIWIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYV 233
IP G+D +R + + LP+ ++ F+G + + K V LL+A K +
Sbjct: 167 DSALIPNGIDFKR--------IQRVKKLPQEYDVI-FVGRLIK---EKNVDLLLRAIKLI 214
Query: 234 ATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEE-DILPEFYRSSDVIVLPS 292
V D ++++G G + L +++ V F ++ + + L + +SS V VLPS
Sbjct: 215 KDDVPDLKVLIIGEGPEKYRLLTLVSKLELTENVKFISFLNDYEKLIAYLKSSKVFVLPS 274
Query: 293 TTVQEGFGMVLIEAGASGKPVIGTN--VGGIKHVIENGKTGILVPPKDPFRLAEAIVTLL 350
+EGFG++++EA ASG PVI + + + +I +G G + PP +P LAE I
Sbjct: 275 K--REGFGIIVLEANASGVPVITLDYPLNASRDLITHGYNGFISPP-NPSSLAEYI---- 327
Query: 351 TDDNLARKIGKTGRRLV---EREYSWDKIVEKTE 381
L+ +GK +R R Y WD I + TE
Sbjct: 328 ---ELSLSLGKKFKRNCIKNARRYDWDNITQLTE 358
>gi|11498225 LPS biosynthesis protein, putative [Archaeoglobus fulgidus]
>gi|7483856|pir||A69327 probable hexosyltransferase (EC
2.4.1.-) AF0617 - Archaeoglobus fulgidus
>gi|2650003|gb|AAB90623.1| (AE001062) LPS biosynthesis
protein, putative [Archaeoglobus fulgidus]
Length = 358
Score = 81.5 bits (198), Expect = 2e-14
Identities = 84/335 (25%), Positives = 152/335 (45%), Gaps = 35/335 (10%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGN--SLENLEGIEVIR- 57
MK+ + P FYP GG+E + Y IA + ++ ++V+V+T G +E ++G+ V R
Sbjct: 1 MKIAQVCPRFYPHIGGVETHVYEIASRIAKK-FDVEVLTTDPGGKLPKVEEIDGLTVRRF 59
Query: 58 --LAPHFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKT 115
LAP +P ++ K + V++AH Y A + KG NK
Sbjct: 60 KSLAPSEAYYFSPELYDYLKK-----NSSDYDVVHAHN----YHAFPALFAALTKGKNKL 110
Query: 116 PFVLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFK--- 172
F YH F + + Y + R + +D I+ S Y ++ +L+ FK
Sbjct: 111 IFTPHYHGS--GHSFFRNVLHKPYKI-FGRKIFKRADAIVCVSN--YEKNLVLKNFKVAE 165
Query: 173 KKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKY 232
+ IP G++ + + + + N K ++++G + + +KG+ Y++K+ K+
Sbjct: 166 DRTYVIPNGINLDEFKDIEKIK----RNKESWKKTILYVGRVEK---YKGLDYVVKSLKH 218
Query: 233 VATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPS 292
+ L +VG+G + +M L + R+ F + L + Y +DV+VL S
Sbjct: 219 LPDNFT---LEVVGKGSYKSKIVEMAKKLDVIDRIRFYQDLSRKELIDRYAKADVLVLLS 275
Query: 293 TTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIEN 327
E +G+V+ EA A+ P I N + I+N
Sbjct: 276 K--HEAYGIVVAEALAAKTPCIVANTSALSEWIDN 308
>pir||T20374 hypothetical protein D2085.6 - Caenorhabditis elegans
>gi|3875385|emb|CAA91062.1| (Z54284) contains similarity
to Pfam domain: PF00534 (Glycosyl transferases group 1),
Score=91.6, E-value=9.5e-25, N=1~cDNA EST yk349e7.5
comes from this gene [Caenorhabditis elegans]
Length = 444
Score = 81.5 bits (198), Expect = 2e-14
Identities = 98/398 (24%), Positives = 174/398 (43%), Gaps = 39/398 (9%)
Query: 3 LLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVIT---ASRKG-NSLENLEGIEVIRL 58
+ +++ +F P GG+E + Y +A+ L+E G V VIT +RKG L N G++V L
Sbjct: 10 IALVSDFFCPNAGGVETHIYFLAQCLIELGHRVVVITHGYGNRKGIRYLSN--GLKVYYL 67
Query: 59 APHFIVSN----TPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNK 114
P + N I ++P L KV E +I+ H+ A + + ++
Sbjct: 68 -PFIVAYNGATLGSIVGSMPW-LRKVLLRENVQIIHGHSTFSSLAHETLMIGGLMG---- 121
Query: 115 TPFVLTYHNDLVKEGFPLDKVAYLYN-LSLQRGLLLLSDTIITPSPYCYYESKLLR--RF 171
+ T D GF D A L N L LQ L+ + TI Y E+ +LR
Sbjct: 122 ---LRTVFTDHSLFGF-ADASAILTNKLVLQYSLINVDQTICV--SYTSKENTVLRGKLD 175
Query: 172 KKKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFK 231
K+ IP ++T + P + + +N P + ++F+G R KG L +
Sbjct: 176 PNKVSTIPNAIETSLFTPDR----NQFFNNPTT---IVFLG---RLVYRKGADLLCEIVP 225
Query: 232 YVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLP 291
V + K ++ G G E ++M + +RV+ G + + + + +
Sbjct: 226 KVCARHKSVRFIIGGDGPKRIELEEMLERFKLHERVVILGMLPHNQVKRVLNQGQIFI-- 283
Query: 292 STTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLT 351
+T++ E F M ++EA + G V+ T VGG+ V+ G+ L P P L +A++ +
Sbjct: 284 NTSLTEAFCMSIVEAASCGLHVVSTRVGGVPEVLPIGEFISLEEPV-PDDLVDALLKAVD 342
Query: 352 DDNLARKIGKTGR-RLVEREYSWDKIVEKTEIALKAIV 388
+ T + V + Y+W + +T++ + V
Sbjct: 343 RREKGLLMDPTEKHEAVSKMYNWPDVAARTQVIYQKAV 380
>pir||S70682 glycosyltransferase homolog - Bordetella pertussis
>gi|992981|emb|CAA62255.1| (X90711) gene referred to as
bplH in Mol. Microbiol. 19:37-52(1996) [Bordetella
pertussis] >gi|2959341|emb|CAA12124.1| (AJ224769) wlbH
[Bordetella bronchiseptica] >gi|3451508|emb|CAA07664.1|
(AJ007747) putative GlcNAc transferase [Bordetella
bronchiseptica] >gi|1589228|prf||2210367K bplH gene
[Bordetella pertussis]
Length = 390
Score = 81.1 bits (197), Expect = 2e-14
Identities = 57/220 (25%), Positives = 104/220 (46%), Gaps = 18/220 (8%)
Query: 168 LRRFKKKLIWIPP-GVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYL 226
+R ++ I++ P G+D + P +S + + A + IGT+ H G+ L
Sbjct: 159 MRGLTRRPIFVTPFGIDEALFQPAQSVQAPA-------ADGPIVIGTVKALETHYGIDTL 211
Query: 227 LKAFKYVATQVKDSY--------LVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDIL 278
++AF + + S L + G G + + + I+ +V F G + +
Sbjct: 212 IQAFALLRQALAASQPGMAERLVLRIYGAGSQLQRLRAQAQAAHIANQVEFKGRIPHAEV 271
Query: 279 PEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKD 338
PE R+ DV V S + FG+ ++EA + PV+ +N G V+ +GKTG +V +D
Sbjct: 272 PEALRALDVYVALSR--MDSFGVAILEACSCALPVVVSNADGPAEVVVDGKTGYIVARED 329
Query: 339 PFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVE 378
A+ + L+ + L +++G GR V EY+W K ++
Sbjct: 330 AHAAADRLQELVLNPELRQRLGAAGRARVLSEYTWSKSLD 369
>gb|AAC69662.1| (AF019745) WaaD [Escherichia coli]
Length = 380
Score = 80.8 bits (196), Expect = 3e-14
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 23/279 (8%)
Query: 118 VLTYHNDL-----VKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYC--YYESKLLRR 170
V+ HN + +++ P +V + + + LL + +I PS Y YY+S L
Sbjct: 102 VIVVHNSMKLYTQIRKRAPQARVVIHMHNAFEPKLLEQNVKMIVPSLYLKKYYQSYLANA 161
Query: 171 FKKKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAF 230
+ +P G+D E Y S N+ KI+ + G R KG+ L+++F
Sbjct: 162 ---DIEIVPNGIDLETYQSNFQPITRSELNISPEEKIIFYAG---RIVPDKGILLLMQSF 215
Query: 231 KYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISK-------RVIFTGYVEEDILPEFYR 283
+ +A K+ LV++G + + K + + R I G + + + +Y
Sbjct: 216 EKLAAAHKNLKLVVIGDYTEMSKSDKGAYQRNVREIAKRLKDRCIMLGSIPPEKMHCYYP 275
Query: 284 SSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGI-LVPPKDPFRL 342
+D++V+PS QE F MV IEA +GKPV+ + GG+ ++ TG L P +
Sbjct: 276 LADLVVIPSQ-FQEPFCMVAIEAMGAGKPVLVSTRGGMTEFVKENTTGFHLKEPMTADSI 334
Query: 343 AEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTE 381
+ I+ L + L + K G+ V YSWD + ++ E
Sbjct: 335 SSDILKTLANPELT-AVAKQGQDFVFEHYSWDGVTQRFE 372
>pir||A69143 galactosyl-transferase RfpB related protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621391|gb|AAB84841.1| (AE000818)
galactosyl-transferase RfpB related protein
[Methanobacterium thermoautotrophicum]
Length = 373
Score = 80.0 bits (194), Expect = 4e-14
Identities = 59/184 (32%), Positives = 92/184 (49%), Gaps = 11/184 (5%)
Query: 199 YNLPR-SAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEY--- 254
YN P ++++G R +K + L+++F+ V + DS LV+VGR Y
Sbjct: 184 YNKPDFGGPTILYVG---RIAPNKNIDLLIESFEIVKKEFDDSKLVIVGRKTFPAYYRKL 240
Query: 255 KKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVI 314
KK+ + + + VIFTG V LP++Y S DV S+ EGF + EA A KP++
Sbjct: 241 KKVIKNKNLQEDVIFTGEVPWGELPDYYASCDVYATCSSW--EGF--LRAEAFAMKKPMV 296
Query: 315 GTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWD 374
+ G + I++G G LV D AEAI+ L+ D L + +G G R + +D
Sbjct: 297 AFDTGANRDTIKDGINGFLVENGDYVSFAEAIIKLIEDPTLNKHMGNEGYRWARKHLDFD 356
Query: 375 KIVE 378
I +
Sbjct: 357 VICQ 360
>sp|P39862|CAPM_STAAU CAPM PROTEIN >gi|506709|gb|AAA64652.1| (U10927) CapM
[Staphylococcus aureus]
Length = 380
Score = 80.0 bits (194), Expect = 4e-14
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 5/172 (2%)
Query: 211 IGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKM-CMSLGISKRVIF 269
IG + R KG+ L+++FK + ++ + L+++G + + + L + V+
Sbjct: 200 IGYVGRIVKDKGIHELIQSFKIIVSKGYNVKLLVIGSLETENSIDESDYLFLTQNPNVVL 259
Query: 270 TGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGK 329
+V + I FY + +V V P T +EGFG V IEA A PVI TNV G + NG+
Sbjct: 260 IKHVSDPI--SFYNNMNVFVFP--THREGFGNVSIEAQALEVPVITTNVTGAIDTVVNGE 315
Query: 330 TGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTE 381
TG +V D +AE I L+ D++L IG GR+ VE ++S I E+ E
Sbjct: 316 TGFIVEKGDFKAIAEKIEKLINDESLRETIGHNGRKRVENKFSSQIIWEELE 367
>pir||G75007 lps biosynthesis rfbu related protein PAB1301 - Pyrococcus abyssi
(strain Orsay) >gi|5459015|emb|CAB50501.1| (AJ248288)
LPS BIOSYNTHESIS RFBU RELATED PROTEIN [Pyrococcus
abyssi]
Length = 330
Score = 79.6 bits (193), Expect = 6e-14
Identities = 92/381 (24%), Positives = 161/381 (42%), Gaps = 60/381 (15%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAP 60
M++LM+ Y P GG+ ++ + L R V V+T + +++ V
Sbjct: 1 MRILMVGHY-PPHRGGVARHLKEVVERL-RRRHSVDVLTYGTVATDVYSVKVPNV----- 53
Query: 61 HFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLT 120
F + SF K++++ +E + +I+AH Y +++ + K P V+T
Sbjct: 54 -FGLRGISFSFLASKKIVELHEERNYDLIHAH-----YVGTTSFAGVLAKRKLGIPLVVT 107
Query: 121 YHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPP 180
H ++ L Y SL+ +D + S + + + K + I
Sbjct: 108 AHGSDLEFMSKLPLGRYFVKASLRE-----ADAVTAVSHFL--AKRAISLGAKSVEVISN 160
Query: 181 GVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDS 240
GV T K Y ++F+G +++ +KG+ L+ +A + +
Sbjct: 161 GVSTCGDRVSKKY--------------IVFLGKVSK---YKGIDEFLE----LARRFPEL 199
Query: 241 YLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFG 300
++ G G++ + V F GYV D + + +VLPS +EGFG
Sbjct: 200 EFLIAGEGNLRE----------LPSNVKFLGYVNPD---DVLSRALALVLPSK--REGFG 244
Query: 301 MVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIG 360
MV++EA + P +G VGGI +I +GK G L D AE + +L D + K+G
Sbjct: 245 MVILEANSFSVPALGRKVGGIPELIRDGKNGFLF---DSIDEAEKFLRVLLDLKVNAKVG 301
Query: 361 KTGRRLVEREYSWDKIVEKTE 381
G+R V YSWD + + E
Sbjct: 302 ALGKR-VASLYSWDDVAIRYE 321
>pir||D70351 probable hexosyltransferase (EC 2.4.1.-) aq_572 [similarity] -
Aquifex aeolicus >gi|2983210|gb|AAC06809.1| (AE000696)
hypothetical protein [Aquifex aeolicus]
Length = 366
Score = 79.6 bits (193), Expect = 6e-14
Identities = 93/345 (26%), Positives = 154/345 (43%), Gaps = 42/345 (12%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAP 60
MK+ + T F + GG + A +A GL ++G+EV VIT G++ E +V++L
Sbjct: 1 MKIALFTDSFRKDLGGGTQVARQLAFGLSKKGYEVLVIT----GSTAEEETPFKVLKLPS 56
Query: 61 HFIVSNTPISFNLP-LKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLK-----GSNK 114
+ LP ++L+K K VI+ H P ++ + +LK +
Sbjct: 57 IKYPFYHNVEIALPNVELLKELKNFNPDVIHYHDPF-LAGTMALLMGKILKIPTVGTIHI 115
Query: 115 TPFVLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKK 174
P LTYH + G K+ + +D ++ S Y + L F K
Sbjct: 116 HPKQLTYHGIKIDNGVIAKKLVSFFG--------NFTDCVVFVSKYQKKLYEELDSFCVK 167
Query: 175 LIW--IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKY 232
+I+ IP + +F + +L + PR+ I T++R K + LK
Sbjct: 168 VIYNGIP-----DYFFVSEKRKLRN----PRNR-----ILTVSRLDKDKNPEFALKCVAE 213
Query: 233 VATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPS 292
++ +V Y +VG G+ + +K+ LGI + F G+V + LPE Y S DV++ +
Sbjct: 214 ISKEVPVEY-TIVGEGNEKEKLEKLARKLGI--KANFLGFVPREELPELYLSHDVLL--N 268
Query: 293 TTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPK 337
T+ E FG+ EA A+G PVI G ++ +G GIL K
Sbjct: 269 TSKTETFGLSFAEAMATGMPVIALKEGSAPEIVGDG--GILCEEK 311
>pir||D72353 lipopolysaccharide biosynthesis protein - Thermotoga maritima
(strain MSB8) >gi|4981152|gb|AAD35715.1|AE001737_8
(AE001737) lipopolysaccharide biosynthesis protein
[Thermotoga maritima]
Length = 434
Score = 79.6 bits (193), Expect = 6e-14
Identities = 106/420 (25%), Positives = 166/420 (39%), Gaps = 48/420 (11%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNS-------------- 46
+ +L+I YF PE G + +AR L +RG EV V+T + N
Sbjct: 13 LSILLINNYFPPEIGAASHLYFYLARELSKRGHEVTVLTGIPRYNIPKETYNQYLRRMKN 72
Query: 47 ----LENLEG---IEVIR-----LAPHFIVSNTPISFNLPLKLIKVFKE----EQFSVIN 90
+EN+ IEVIR + H ++ F + LK+ KE ++ V
Sbjct: 73 KKFVIENISDCADIEVIRVRLPYIERHQLLRRGVEHFEIALKMFSYAKEYLRNKRVDVSL 132
Query: 91 AHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVKEGFPLD--KVAYLYNL--SLQRG 146
++P P +AW LK + PFVL + + L K L L +++
Sbjct: 133 VYSP-PITLYKTAWKVKRLKDA---PFVLNVQDLFPQAAIDLGILKNPLLIRLFKQVEKK 188
Query: 147 LLLLSDTIITPSPYCY-YESKLLRRFKKKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSA 205
L+D I S + +L +K++ + VD PG SI +
Sbjct: 189 AYQLADLITVHSERNKEFVKSVLNGDGRKVLVMENWVDENEIKPGDKINDFSIKHGLTEK 248
Query: 206 KIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISK 265
+V F GT+ + + K + KD ++VG G + E KK+ SL + +
Sbjct: 249 FVVSFAGTLGFSQDMEVIIRAANELK----EYKDIVFIIVGNGVRLEESKKLAESLNL-Q 303
Query: 266 RVIFTGYVEEDILPEFYRSSDVIV--LPSTTVQEGFGMVLIEAGASGKPVIGTN--VGGI 321
+ F V +I P SSDV + L ++ ++G PVI G
Sbjct: 304 NIRFIPSVPREIYPLVLHSSDVSLATLTKDVKTPVVPSKILSIMSAGIPVIAVMNLEGDA 363
Query: 322 KHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTE 381
++E G +P D LAE I+ L + L +G+ GRR +E S K EK E
Sbjct: 364 PKLVEKANAGFAIPAGDYKSLAEKILLLYKNPELRESLGRNGRRYIEENLSSRKAAEKYE 423
>pir||T44785 glycosyltransferase homolog [imported] - Bordetella parapertussis
>gi|2959339|emb|CAA12123.1| (AJ224768) putative GlcNAc
transferase [Bordetella parapertussis]
Length = 390
Score = 79.2 bits (192), Expect = 8e-14
Identities = 57/220 (25%), Positives = 103/220 (45%), Gaps = 18/220 (8%)
Query: 168 LRRFKKKLIWIPP-GVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYL 226
+R ++ I++ P G+D P +S + + A + IGT+ H G+ L
Sbjct: 159 MRGLTRRPIFVTPFGIDEALSQPAQSVQAPA-------ADGPIVIGTVKALETHYGIDTL 211
Query: 227 LKAFKYVATQVKDSY--------LVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDIL 278
++AF + + S L + G G + + + I+ +V F G + +
Sbjct: 212 IQAFALLRQALAASQPGMAERLVLRIYGAGSQLQRLRAQAQAAHIANQVEFKGRIPHAEV 271
Query: 279 PEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKD 338
PE R+ DV V S + FG+ ++EA + PV+ +N G V+ +GKTG +V +D
Sbjct: 272 PEALRALDVYVALSR--MDSFGVAILEACSCALPVVVSNADGPAEVVVDGKTGYIVARED 329
Query: 339 PFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVE 378
A+ + L+ + L +++G GR V EY+W K ++
Sbjct: 330 AHAAADRLQELVLNPELRQRLGAAGRARVLSEYTWSKSLD 369
>pir||C72354 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981140|gb|AAD35704.1|AE001736_2 (AE001736)
conserved hypothetical protein [Thermotoga maritima]
Length = 397
Score = 79.2 bits (192), Expect = 8e-14
Identities = 87/343 (25%), Positives = 151/343 (43%), Gaps = 35/343 (10%)
Query: 53 IEVIRLAPHFIVSN--TPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLK 110
I ++RL + ++ N T + + + F ++ +I+AH A ++A +L
Sbjct: 80 INLLRLIKYGLLRNYFTVLCKEYKKMIEEAFNLNEYDLIHAHGMYSVPAGLTA---KILA 136
Query: 111 GSNKTPFVLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRR 170
+ PF++T H V P K Y+ L + +S ++ ++K L
Sbjct: 137 EKYRKPFIVTLHGSDVNLFMPHRKEIYVSILESASATIFVSKALLE-------KAKSLGF 189
Query: 171 FKKKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSA-KIVMFIGTMNRGHAHKGVPYLLKA 229
K + IP G D + P + + R K V F+G + K L +
Sbjct: 190 SGKNAVVIPNGYDETIFKPMDKEAVRKELGIHREGYKYVGFVGNLI---PIKRADKLGEI 246
Query: 230 FKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIV 289
F +A ++ +++ ++VG G + + +K L I IFTG + + + ++ + DV+V
Sbjct: 247 FHLIAKEIPETFFIIVGDGPLRKKIEKETKGLNI----IFTGRLPQKDVAKYMNAMDVMV 302
Query: 290 LPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPF--RLAEAIV 347
LPS EG+ V++EA A G VIG++ GI I G +V D F R A +V
Sbjct: 303 LPSRN--EGWPCVILEAQACGTCVIGSSNRGIPEAI--GFPEYVVEEGDQFEERFARRVV 358
Query: 348 TLLTDDNLARKIGKTGRRLVERE--YSWDKIVEKTEIALKAIV 388
+L + G R++ER ++W IVEK K +V
Sbjct: 359 EVLNE-------GYDVNRILERAKGFTWRNIVEKEIDVHKRVV 394
>pir||A75194 glycogen synthase PAB2292 - Pyrococcus abyssi (strain Orsay)
>gi|5457509|emb|CAB49000.1| (AJ248283) GLYCOGEN SYNTHASE
[Pyrococcus abyssi]
Length = 437
Score = 79.2 bits (192), Expect = 8e-14
Identities = 75/247 (30%), Positives = 123/247 (49%), Gaps = 29/247 (11%)
Query: 150 LSDTIITPSP-YCYYESKLLRRFKKKLIWIPPGVD----TERYFPG----KSYRLHSIYN 200
++D + T S Y E R F+ K+ ++ G+D E Y G + L S +
Sbjct: 186 IADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFG 245
Query: 201 LPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVAT--QVKDSYLVLVGRGDMIPEYKKMC 258
+ MFIG +RG KGV LLKA + +++ + ++ +++G+GD PE +
Sbjct: 246 MDEGVTF-MFIGRFDRGQ--KGVDVLLKAIEILSSKKEFQEMRFIIIGKGD--PELEGWA 300
Query: 259 MSL----GISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVI 314
SL G K + T + + + E Y S D +++PS E FG+V +EA G I
Sbjct: 301 RSLEEKHGNVK--VITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPI 356
Query: 315 GTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTL--LTDDNLARKIGKTGRRLVEREYS 372
+ VGG++ +I N +TGILV DP LA AI+ L+ +L++ +R + +S
Sbjct: 357 ASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAM--SFS 413
Query: 373 WDKIVEK 379
W+K E+
Sbjct: 414 WEKSAER 420
>gb|AAG38610.1|AF319969_1 (AF319969) mannosyl transferase [Bradyrhizobium japonicum]
Length = 363
Score = 79.2 bits (192), Expect = 8e-14
Identities = 73/271 (26%), Positives = 119/271 (42%), Gaps = 26/271 (9%)
Query: 129 GFPLDKV----AYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDT 184
G+PL + A ++ L R L+ D II SP K+ + GVDT
Sbjct: 106 GWPLKLIFTSAAQRHHTWLTRWLIRNMDAIIATSPLS------ASYLKRDATVVMHGVDT 159
Query: 185 ERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVL 244
+RY P R + + IG R A KG ++A + + D V+
Sbjct: 160 DRYAPPAD-RAAAFAESGLPGRYA--IGCFGRVRAQKGSDVFVEAMCRLLPRYPDFTAVI 216
Query: 245 VGRGDMIPEY-------KKMCMSLGISKRVIFTGYVE-EDILPEFYRSSDVIVLPSTTVQ 296
VG ++PE K+ + G+ R+I TG + ED++ + R + + T+
Sbjct: 217 VGA--VVPEQLAFANELKRKIEAAGLQSRIIITGELPIEDVVRWYQR---LTIYAFTSRN 271
Query: 297 EGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLA 356
EGFG+ LIEA ++G ++ G + V+E+G TG+L P D L A+ ++ D A
Sbjct: 272 EGFGLTLIEAMSAGAALVAARAGAAEFVVEDGVTGVLTSPGDADALVAALEPMMRDPAAA 331
Query: 357 RKIGKTGRRLVEREYSWDKIVEKTEIALKAI 387
+G R+ V ++S D A +A+
Sbjct: 332 AAMGARARQRVVDKFSLDAEANAIAKAYRAL 362
>pir||C70859 probable hexosyltransferase (EC 2.4.1.-) Rv3032 [similarity] -
Mycobacterium tuberculosis (strain H37RV)
>gi|2791630|emb|CAA16117.1| (AL021287) hypothetical
protein Rv3032 [Mycobacterium tuberculosis]
Length = 414
Score = 78.8 bits (191), Expect = 1e-13
Identities = 94/405 (23%), Positives = 177/405 (43%), Gaps = 44/405 (10%)
Query: 1 MKLLMITPYFYPEG-GGLEKYAYMIARGLVERGWEVKVITASRKG-------NSLENLEG 52
M++LM++ + P GGL ++ + ++ L G +V V++ G +S E EG
Sbjct: 1 MRILMVSWEYPPVVIGGLGRHVHHLSTALAAAGHDVVVLSRCPSGTDPSTHPSSDEVTEG 60
Query: 53 IEVIRLA--PH-FIVSNTPISFNLP---------LKLIKVFKEEQF--SVINAHTPVPYY 98
+ VI A PH F N +++ L L+L K+ + + V++AH + +
Sbjct: 61 VRVIAAAQDPHEFTFGNDMMAWTLAMGHAMIRAGLRLKKLGTDRSWRPDVVHAHDWLVAH 120
Query: 99 ADVSAWVNNVLKGSNKTPFVLTYH-NDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITP 157
++ L P V T H + + + +++ L+ SD++IT
Sbjct: 121 PAIA------LAQFYDVPMVSTIHATEAGRHSGWVSGALSRQVHAVESWLVRESDSLITC 174
Query: 158 SPYCYYE-SKLLRRFKKKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSAKI-VMFIGTMN 215
S E ++L ++ I G+D R+ P + R PR+ ++++G +
Sbjct: 175 SASMNDEITELFGPGLAEITVIRNGIDAARW-PFAARR-------PRTGPAELLYVGRLE 226
Query: 216 RGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEE 275
KGV + A + + L + G G + + F G+++
Sbjct: 227 Y---EKGVHDAIAALPRLRRTHPGTTLTIAGEGTQQDWLIDQARKHRVLRATRFVGHLDH 283
Query: 276 DILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVP 335
L +D VLPS E FG+V +EA A+G P++ +N+GG+ + NG+TG+
Sbjct: 284 TELLALLHRADAAVLPSH--YEPFGLVALEAAAAGTPLVTSNIGGLGEAVINGQTGVSCA 341
Query: 336 PKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKT 380
P+D LA A+ ++L D A++ + R+ + ++ W + T
Sbjct: 342 PRDVAGLAAAVRSVLDDPAAAQRRARAARQRLTSDFDWQTVATAT 386
>pir||F72257 lipopolysaccharide biosynthesis protein-related protein -
Thermotoga maritima (strain MSB8)
>gi|4981969|gb|AAD36476.1|AE001793_6 (AE001793)
lipopolysaccharide biosynthesis protein-related protein
[Thermotoga maritima]
Length = 471
Score = 78.8 bits (191), Expect = 1e-13
Identities = 60/213 (28%), Positives = 108/213 (50%), Gaps = 24/213 (11%)
Query: 173 KKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKY 232
+K+ IP G++ E Y +LP +G + R K + ++A
Sbjct: 260 EKMFIIPNGINVEEY------------DLPPEKHEGFVVGFVGRVARIKDLKTAIRAISI 307
Query: 233 VATQV--KDSYLVL--VGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVI 288
V V K ++L++ V D + E K++ L + V F G + E+Y D++
Sbjct: 308 VKEVVGEKLTFLIIGPVDAEDYLAECKRLVRVLRLEDTVEFLG---PQNVKEYYPKFDLL 364
Query: 289 VLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVI--ENGKTGILVPPKDPFRLAEAI 346
+L S V EG +V++EA A+G P++ T+VG + +I ++G+ GI+VPPKD +++AI
Sbjct: 365 LLSS--VSEGQPLVILEAMAAGVPIVATDVGACRDIIYDKDGQCGIVVPPKDHLSMSKAI 422
Query: 347 VTLLTDDNLARKIGKTGRRLVEREYSWDKIVEK 379
+ L D L K +++V++ Y + ++EK
Sbjct: 423 IKLYEDKELRDTFSKNAKKVVQK-YRVETMIEK 454
>gb|AAD24453.1|AF118389_10 (AF118389) Cps2G [Streptococcus suis]
Length = 385
Score = 78.4 bits (190), Expect = 1e-13
Identities = 72/276 (26%), Positives = 117/276 (42%), Gaps = 20/276 (7%)
Query: 109 LKGSNKTPFVLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLL 168
LK K P + H +VK F D + +L +D I+T S K
Sbjct: 112 LKRKLKLPLLWHVHEIIVKPKFISDSINFLMGR--------FADKIVTVSQAVANHIKQS 163
Query: 169 RRFKKKLIW-IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLL 227
K I I GVD + ++ + + +++ A ++ +G +N A KG L
Sbjct: 164 PHIKDDQISVIYNGVDNKVFYQSDARSVRERFDIDEEALVIGMVGRVN---AWKGQGDFL 220
Query: 228 KAFKYVATQVKDSYLVLVG---RGD--MIPEYKKMCMSLGISKRVIFTGYVEEDILPEFY 282
+A + Q + + G G+ + E +K L +S +V Y E Y
Sbjct: 221 EAVAPILEQNPKAIAFIAGSAFEGEEWRVVELEKKISQLKVSSQVRRMDYYANTT--ELY 278
Query: 283 RSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRL 342
D+ VLPST + V+++A A GKPV+G GG+ +++ G G LV P P L
Sbjct: 279 NMFDIFVLPSTN-PDPLPTVVLKAMACGKPVVGYRHGGVCEMVKEGVNGFLVTPNSPLNL 337
Query: 343 AEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVE 378
++ I+ L + NL +KIG + +S V+
Sbjct: 338 SKVILQLSENINLRKKIGNNSIERQKEHFSLKSYVK 373
>pir||S77338 LPS glycosyltransferase icsA - Synechocystis sp. (strain PCC 6803)
>gi|1652520|dbj|BAA17441.1| (D90906) LPS
glycosyltransferase IcsA [Synechocystis sp.]
Length = 379
Score = 78.0 bits (189), Expect = 2e-13
Identities = 44/171 (25%), Positives = 90/171 (51%), Gaps = 5/171 (2%)
Query: 208 VMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRV 267
V F+ ++ H G+ YL++AF + V ++ L++VG G ++ ++ +V
Sbjct: 202 VGFVSSLKPWH---GLDYLIEAFAQLRRTVPEARLLIVGDGPQRQVLERAISQRNLTTQV 258
Query: 268 IFTGYVEEDILPEFYRSSDVIVLPSTTVQEGF--GMVLIEAGASGKPVIGTNVGGIKHVI 325
+TG V + +P + V V P ++ + + ++E A+G P++ + +G +K +I
Sbjct: 259 QWTGTVPPEQVPHWLSQMSVAVAPYPASEDFYFSPLKVVEYMAAGLPIVASCIGQVKDII 318
Query: 326 ENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKI 376
++G TGIL P +P LA+A+ L +++G R V + ++WD++
Sbjct: 319 DDGVTGILCLPGEPTALAQALERLWRSPQQRQQLGLAARDFVLKHHTWDRV 369
>pir||T46662 alpha 1,2 N-acetylglucosamine transferase [imported] - Neisseria
meningitidis >gi|1209581|gb|AAC44648.1| (U58765) alpha
1,2 N-acetylglucosamine transferase [Neisseria
meningitidis] >gi|1588748|prf||2209336A rfaK gene
[Neisseria meningitidis]
Length = 354
Score = 77.6 bits (188), Expect = 2e-13
Identities = 90/367 (24%), Positives = 152/367 (40%), Gaps = 36/367 (9%)
Query: 15 GGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAPHFIVSNTPISFNLP 74
GG E+Y Y +++ L RG + TA K N L + EV + + + + F+L
Sbjct: 17 GGGEQYVYDVSKALGLRG--CTMFTAVNKNNELMHRRFSEVSSVFTTRLHTLNGL-FSL- 72
Query: 75 LKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVKEGFPLDK 134
L + +E + S + HT A ++ +LK + HN + +
Sbjct: 73 CALTRFIRENRISHLMIHT------GKIAALSILLKKLTGVRLIFVKHNVVANK------ 120
Query: 135 VAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERYFPGKSYR 194
Y+ +Q+ +D I S Y FK+K I G+DT+R+ P +
Sbjct: 121 -TDFYHRLIQKN----TDRFICVSRLVYDVQTADNPFKEKYRIIHNGIDTDRFPPSQEKP 175
Query: 195 LHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRG--DMIP 252
+ + + +I KG+ L++A + + L L G G D +
Sbjct: 176 DSRFFTVAYAGRI----------SPEKGLENLIEACVILHRKYPQIRLKLAGHGHPDYMC 225
Query: 253 EYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKP 312
K+ + G V F G+ E + FYR SDV+VLPS V E FG+ L EA
Sbjct: 226 RLKRDVSASGAEPFVSFEGFTEN--IASFYRQSDVVVLPSL-VPEAFGLSLCEAMYCRTA 282
Query: 313 VIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYS 372
VI +G K ++E+ ++GIL+ P LA+ I L+ + + + V ++
Sbjct: 283 VISNTLGAQKEIVEHHQSGILLDRLTPESLADEIERLVLNPEAKNALATAAHQCVAARFT 342
Query: 373 WDKIVEK 379
+ +K
Sbjct: 343 INHTADK 349
>pir||H83019 probable glycosyl transferase PA5004 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9951290|gb|AAG08389.1|AE004913_4 (AE004913) probable
glycosyl transferase [Pseudomonas aeruginosa]
Length = 378
Score = 77.6 bits (188), Expect = 2e-13
Identities = 55/160 (34%), Positives = 82/160 (50%), Gaps = 9/160 (5%)
Query: 211 IGTMNRGHAHKGVPYLLKAFKYVATQV-KDSYLVLVGRGDMIPEYKKMCMSLGISKRVIF 269
+G + R H K LL+ F ++ ++S L ++G G + + K + LGI +RV+F
Sbjct: 198 VGNVGRLHPDKDQATLLRGFAAALPRLPQNSLLAILGSGRLEEQLKDLACELGIGERVLF 257
Query: 270 TGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGK 329
G VEE ++++ D L S E FGMVL+EA +G P+I T GG + V+E
Sbjct: 258 LGQVEE--ARRYFKAFDAFALSSD--HEPFGMVLLEAMVAGVPLIATACGGAREVVEG-- 311
Query: 330 TGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVER 369
GIL P D LAE + L D R+ R ++ER
Sbjct: 312 VGILFPLGDETALAEGLTHLAALDRRQRE--ACARLMLER 349
>pir||B71691 capm protein (capM1) RP344 - Rickettsia prowazekii
>gi|3860904|emb|CAA14804.1| (AJ235271) CAPM PROTEIN
(capM1) [Rickettsia prowazekii]
Length = 389
Score = 77.3 bits (187), Expect = 3e-13
Identities = 91/396 (22%), Positives = 165/396 (40%), Gaps = 53/396 (13%)
Query: 15 GGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAPHFIVSNTPISFNLP 74
GG+E+ +A+ L G +I+A G ++ L+ +++ + + N I N
Sbjct: 25 GGVERGTIEVAKYLKILGHTPIIISAG--GTLVKELDKEDILHIEMNSSSKNPCIIVNNA 82
Query: 75 LKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVKEGFPLDK 134
+ ++ K+ +++ + P AW + + F+ T+H
Sbjct: 83 KLIAEIIKKYHVDIVHTRSRAP------AWSSYLATKWTNAKFLTTFHG----------- 125
Query: 135 VAYLYNL-----SLQRGLLLLSDTIITPSPYCYYESKLLRRFK---KKLIWIPPGVDTER 186
+YN+ ++L + +I S + + LL+ +K K++ I GV+ +
Sbjct: 126 ---VYNIPNSFKKYYNSIMLKGEKVIAVSNFV--KQYLLKNYKVDESKIVVIERGVNCDY 180
Query: 187 YFPG-----KSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSY 241
+ P K + Y+ P + I++ M H + L K+ +D Y
Sbjct: 181 FDPANLTPEKLKKCSDKYDAPSNVPIILMPSRMTSWKGHLVLVEALSKLKH-----RDFY 235
Query: 242 LVLVGRGDMIPEY----KKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQE 297
++VG P + K++ +L + ++ G + DI+ Y SD+IV S E
Sbjct: 236 CLMVGDISRHPNFTNRVKELIATLKLQNKIQIFGN-DSDII-SLYGISDIIVSASIE-PE 292
Query: 298 GFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAI---VTLLTDDN 354
FG +IE A K VI TN+GG I N TG V P + LA+ I ++L D
Sbjct: 293 AFGRTIIEGQAMEKLVIATNLGGAVETINNNITGFHVEPNNAEALAQKIDYCFSILGTDT 352
Query: 355 LARKIGKTGRRLVEREYSWDKIVEKTEIALKAIVNH 390
A+KI + R V +S D ++ K K I+ +
Sbjct: 353 -AKKIQEAARHTVIDNFSLDLMLRKNLEVYKEILKN 387
>pir||T45962 hypothetical protein F7J8.200 - Arabidopsis thaliana
>gi|6759445|emb|CAB69850.1| (AL137189) putative protein
[Arabidopsis thaliana]
Length = 470
Score = 77.3 bits (187), Expect = 3e-13
Identities = 53/155 (34%), Positives = 76/155 (48%), Gaps = 10/155 (6%)
Query: 222 GVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEF 281
GV L+ K V ++ ++ + +G G YK+ L +FTG ++ D L +
Sbjct: 278 GVEKSLELLKSVMDKLPEARIAFIGDGP----YKEDLEKLFTGMPAVFTGTLQGDELSQA 333
Query: 282 YRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVI---ENGKTGILVPPKD 338
Y S DV V+PS + E G+V++EA +SG PV+ GGI +I + GKTG L P D
Sbjct: 334 YASGDVFVMPSES--ETLGLVVLEAMSSGLPVVAARAGGIPDIIPEDQEGKTGFLFNPGD 391
Query: 339 PFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSW 373
+ TLL D IGK R E+ Y W
Sbjct: 392 VEDCVTKLRTLLHDRETREIIGKAAREETEK-YDW 425
>dbj|BAB07099.1| (AP001518) glycosyl transferase (lipopolysaccharide biosynthesis)
[Bacillus halodurans]
Length = 452
Score = 77.3 bits (187), Expect = 3e-13
Identities = 95/401 (23%), Positives = 170/401 (41%), Gaps = 43/401 (10%)
Query: 5 MITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAPHFIV 64
M T + YP GGL Y ++ + L +G+ V V+ A + G L L E I + +
Sbjct: 1 MATYFMYPSTGGLNTYIAVLKKTLEAQGYTVDVL-ARKPGPRLHLLS--EEINMNTLRKM 57
Query: 65 SNTPIS--------FNLPLKLIKVFKEEQFSVINAHTPVPYY-----ADVSAWVNNVLKG 111
+ P++ F+ P + + F + +A P+ Y DV +
Sbjct: 58 MSKPLNHYYKKHGQFSEPYIIKQELDRYVFELSSALLPIETYDLIHAQDVVSTRALARVK 117
Query: 112 SNKTPFVLTYHNDLVKEGFPLDKV------AYLYNLSLQRGLLLLSDTIITPSPYCYYES 165
P V T H +E F + ++ Y+L+ + L +D +I + +
Sbjct: 118 PAHIPLVTTIHGLYSEERFNRGVIQTKNDHSWKYSLAQEYIGALSADKVIVLTNW----- 172
Query: 166 KLLRRFKKKLI-------WIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGH 218
+ +RF+ +L IP G+ E F K ++ +P S K + R
Sbjct: 173 -MRQRFQDQLNISSHHFETIPNGMFIEE-FTNKLTNKTQVH-IPESKKFTILCPA--RLV 227
Query: 219 AHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDIL 278
A K L+ A + + + +D +L G G++ E + C + +F G + +
Sbjct: 228 AEKDHRTLIDAVQLLKKEREDFICLLAGDGELREELEGYCREKEVQDVCLFLG--NRNDI 285
Query: 279 PEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKD 338
PE SD++VLPS +QE ++EA +GKP+I +N GG+ ++ +G TG L +D
Sbjct: 286 PELMNRSDLVVLPS--LQENLPFTVMEAQVAGKPLIVSNAGGLPEMVHDGVTGRLFKKRD 343
Query: 339 PFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEK 379
+LA + L+ D + +G + ++S + EK
Sbjct: 344 SRQLAFILKELMDHDEDRQLLGNNAKDWGRSQWSANTFCEK 384
>pir||E71699 capm protein (capM2) RP414 - Rickettsia prowazekii
>gi|3860971|emb|CAA14871.1| (AJ235271) CAPM PROTEIN
(capM2) [Rickettsia prowazekii]
Length = 338
Score = 76.9 bits (186), Expect = 4e-13
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 18/228 (7%)
Query: 160 YCYYESKLLRRFKKKLIWIPPGVD--TERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRG 217
Y E L F + I+I P + T+ + P K Y K V+ IG + R
Sbjct: 124 YHMKEFLLKNNFAESRIFILPNMINITKNFVPNKIY------------KKVIVIGVLARF 171
Query: 218 HAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDI 277
A KG+ +KA K + + + +V+ G G+ + L + ++ FTG+V +
Sbjct: 172 VAKKGIDVFIKAIKLLKDKQYNIQVVIGGNGNEKDNLIALVHKLNLQDQISFTGWVNDK- 230
Query: 278 LPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPK 337
F++ D+ LPS + E FG++++EA + P++ T+ G K ++++ K G++
Sbjct: 231 -DTFFKQIDIFCLPS--LHEPFGIIILEAMQASVPIVSTDTEGPKEILKHLKDGLICKVG 287
Query: 338 DPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTEIALK 385
LAE I+ L+ + A K K +++ Y + +K + LK
Sbjct: 288 SIEDLAEKIIYLIDNPLQAAKFSKNAYLKLKQNYDIKVVSKKLQYILK 335
>pir||T44601 probable glycosyltransferase [imported] - Rhizobium meliloti
megaplasmid 2 >gi|4929439|gb|AAD33995.1|AF148072_3
(AF148072) putative glycosyltransferase [Sinorhizobium
meliloti]
Length = 415
Score = 76.9 bits (186), Expect = 4e-13
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 5/165 (3%)
Query: 211 IGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFT 270
I ++ R KG LLKA + + + +G G++ + + LGI R+ +
Sbjct: 231 IVSVGRAVPKKGYDVLLKALSLLPADINWRF-EHIGAGELTGGLQALAAKLGIEDRIRWH 289
Query: 271 GYVEEDILPEFYRSSDVIVLPSTTV----QEGFGMVLIEAGASGKPVIGTNVGGIKHVIE 326
G +++ + YR +D+ L ++G VL+EA + I T V GI ++E
Sbjct: 290 GALDQKDVLGRYRGADIFALACRVAADGDRDGLPNVLVEASSQRLACISTAVSGIPELLE 349
Query: 327 NGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREY 371
+GK G++VPP+ P LA A+ L+ D L R++G R V E+
Sbjct: 350 DGKNGLVVPPESPEPLAAALERLIRDPELRRRLGAARERRVRSEF 394
>emb|CAB92272.1| (AL356595) putative transferase [Streptomyces coelicolor A3(2)]
Length = 436
Score = 76.9 bits (186), Expect = 4e-13
Identities = 67/195 (34%), Positives = 100/195 (50%), Gaps = 20/195 (10%)
Query: 194 RLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPE 253
RLH + A +V+ +G + R KG LL A++ V +V + LVLVG G P+
Sbjct: 205 RLHGV---GPHAPLVVCVGRLCR---QKGQDVLLSAWESVLARVPGARLVLVGDG---PD 255
Query: 254 YKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPV 313
++ S V+FTG V D P +YR++D++VLPS EG + +EA A G+PV
Sbjct: 256 RARLTARAPAS--VLFTGTVA-DAAP-WYRAADLVVLPSRW--EGMALAPLEAMACGRPV 309
Query: 314 IGTNVGGIKHVIENGKTG-ILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYS 372
+ T+V G + + +VPP+DP LA+A LL D L +G+ GR V +
Sbjct: 310 VVTDVDGAREGLPPALVPHCVVPPEDPAALADAAAALLLDAPLRASLGRRGRAHVRSAHD 369
Query: 373 WDKIVEKTEIALKAI 387
V T A+ A+
Sbjct: 370 ----VRHTAAAVAAL 380
>pir||T04103 sucrose-phosphate synthase (EC 2.4.1.14) 1 - rice
>gi|1311479|dbj|BAA08304.1| (D45890) sucrose phosphate
synthase [Oryza sativa]
Length = 1084
Score = 76.1 bits (184), Expect = 7e-13
Identities = 68/239 (28%), Positives = 110/239 (45%), Gaps = 39/239 (16%)
Query: 170 RFKKKLIWIPPGVD---------TERYFPGKSYRLHSIYNLPRS-AKIVMF--------I 211
RF +++ IPPG+D T GK + + S +LP A++ F I
Sbjct: 446 RFMPRMVVIPPGMDFSSVVVPEDTSDGDDGKDFEIASPRSLPPIWAEVSRFWTNPHKPMI 505
Query: 212 GTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVL------------VGRGDMIPEYKKMCM 259
++R K + L+KAF + + L+L G ++ K+
Sbjct: 506 LALSRPDPKKNITTLVKAFGECRPLRELANLILSMGTRDDIDGMSAGNASVLTTVLKLID 565
Query: 260 SLGISKRVIFTGYVEEDILPEFYRSSDVI--VLPSTTVQEGFGMVLIEAGASGKPVIGTN 317
+ V F Y ++ +PE YR + + V + + E FG+ LIEA A G P++GT
Sbjct: 566 KYDLYGSVAFPKYHKQSDVPEIYRLTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVGTK 625
Query: 318 VGG---IKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSW 373
GG IK+ + N G+LV P D +A+A++ L+ D NL ++ K G R ++ YSW
Sbjct: 626 NGGPVDIKNALNN---GLLVDPHDQHAIADALLKLVADKNLWQECRKNGLRNIQL-YSW 680
>pir||C71154 hypothetical protein PH0434 - Pyrococcus horikoshii
>gi|3256837|dbj|BAA29520.1| (AP000002) 336aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 336
Score = 76.1 bits (184), Expect = 7e-13
Identities = 98/378 (25%), Positives = 161/378 (41%), Gaps = 59/378 (15%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAP 60
M++LMI Y P GG+ ++ + L R EV VIT EN+ ++V +
Sbjct: 1 MRILMIGHY-PPHRGGVARHVKDLVDYL-SREHEVHVITYGTVKGKGENVSYVKVPNI-- 56
Query: 61 HFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLT 120
F + T + +K+ K+ F +I+AH Y +++ ++K P V+T
Sbjct: 57 -FGLRGTSFTLLASKLGVKLHKKLNFDLIHAH-----YVGTTSYAGVLIKERTGLPLVVT 110
Query: 121 YHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLI--WI 178
H + L +Y SL + ++ +I S Y ++K+L K+I W+
Sbjct: 111 AHGSDLDFTSKLPLGSYYVKKSL-----IKANAVIAVSHYLGVKAKMLGAENVKVIPNWV 165
Query: 179 PPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVK 238
GKS + + FIG + +KGV + F +A
Sbjct: 166 TK--------TGKS-----------RGEYIAFIGRLTE---YKGV----EDFIELAKLFP 199
Query: 239 DSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYV-EEDILPEFYRSSDVIVLPSTTVQE 297
V+ G G ++ + K K V F GY ED+L + + V++LPS +E
Sbjct: 200 QEKFVVAGEGPLLKKLMKES-----PKNVKFLGYKPSEDVLSK----AKVLILPSK--RE 248
Query: 298 GFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLAR 357
GFG+V++EA + P +G VGGI+ +I +GK G D A + L + R
Sbjct: 249 GFGLVILEANSFKVPSLGRRVGGIREIIRDGKNGYTFSALDE---AYEYLKELLNPKKGR 305
Query: 358 KIGKTGRRLVEREYSWDK 375
K G R + R YS ++
Sbjct: 306 KAGAISYR-ISRFYSMEE 322
>gb|AAF23992.1| (AF035937) WbpU [Pseudomonas aeruginosa]
Length = 376
Score = 76.1 bits (184), Expect = 7e-13
Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Query: 271 GYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKT 330
GY +DI F RS ++VLPS +EG VL+EA A G+ V+ T+V G + I+ T
Sbjct: 260 GY-RQDIASVFARSH-IVVLPS--YREGLPKVLVEASACGRAVVTTDVPGCRDAIQADVT 315
Query: 331 GILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEK 379
G+LVP +D LA+AI L+ L +K+G GR L ER+++ + IV++
Sbjct: 316 GLLVPVRDSAALADAIQRLIESPELRKKMGAAGRALAERDFAIESIVQQ 364
>pir||D64433 hypothetical protein MJ1069 - Methanococcus jannaschii
>gi|1591721|gb|AAB99071.1| (U67549)
galactosyltransferase isolog [Methanococcus jannaschii]
Length = 392
Score = 75.7 bits (183), Expect = 9e-13
Identities = 81/400 (20%), Positives = 185/400 (46%), Gaps = 22/400 (5%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVE-RGWEVKVITAS-RKGNSLE-NLEGIEVIR 57
+KL++ Y+ P GGLE + + L E +++ + + K E ++V R
Sbjct: 4 IKLIIFPGYYIPHIGGLETHVDEFTKHLSEDENYDIYIFAPNIPKYKEFEIRHNNVKVYR 63
Query: 58 LAPHFIVSNTPISFNLPLKLIKVF---KEEQFSVINAHTPVPYYADVSAWVNNVLKGSNK 114
I+ N P+ +K ++F + F ++ T + + ++ L+ K
Sbjct: 64 YPAFEIIPNYPVPNIFNIKFWRMFFNLYKIDFDIVMTRTRF-FSNTLLGFIFAKLRFKKK 122
Query: 115 TPFVLTYHNDLVK-EGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRF-- 171
+ + + VK E +K++Y Y+ ++ + + +D ++ S ++ +L F
Sbjct: 123 KLIHVEHGSAFVKLESEFKNKLSYFYDKTIGKLIFKKADYVVAISKAV--KNFILENFVN 180
Query: 172 KKKLIWIPPGVDTERYFP-GKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAF 230
K + I G++ E+ G+ ++ + ++ + F+G + + KGV ++KA+
Sbjct: 181 DKDIPIIYRGLEIEKIESIGEDKKIKEKF---KNKIKLCFVGRL---YKWKGVENIIKAY 234
Query: 231 KYVATQVKDSY-LVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIV 289
+ +K+ L++VG G+ + KK+ + ++ + FTG V+ + ++SD+ +
Sbjct: 235 VDLPKDLKEKIILIVVGYGEDLERLKKLAGNY-LNNGIYFTGKVDFEKAIAIVKASDIYI 293
Query: 290 LPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTL 349
S+ G L++A GK ++ + G V+ +G GIL+ P + I+ L
Sbjct: 294 -HSSYKGGGLSSSLLQAMCCGKAIVASPYEGADEVVIDGYNGILLKDNSPEEIKRGIIKL 352
Query: 350 LTDDNLARKIGKTGRRLVEREYSWDKIVEKTEIALKAIVN 389
+ ++NL + G+ + ++ ++W K V++ + + +VN
Sbjct: 353 IENNNLRKIYGENAKNFIKENFNWKKSVKEYKKIFERLVN 392
>pir||C71153 hypothetical protein PH0426 - Pyrococcus horikoshii
>gi|3256829|dbj|BAA29512.1| (AP000002) 403aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 403
Score = 75.7 bits (183), Expect = 9e-13
Identities = 79/309 (25%), Positives = 137/309 (43%), Gaps = 27/309 (8%)
Query: 88 VINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVK-EGFPLDKVAYLYNLSLQRG 146
+I+ T +P D+ W +K S + F L ++ + GF +L + Q
Sbjct: 108 IIHQKTGIPVILDIDDWELGFVKDSANSVFKLPFYAFPHRFNGFQSISDVFLLEKTAQ-- 165
Query: 147 LLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDT---ERYFPGKSYRLHSIYNLPR 203
LL + IT S S L + F +IW + ++Y P +S R + +P
Sbjct: 166 -LLREEISITVS-----NSFLQKMFGGTIIWHTRDENVFNPKKYDPEESRRS---FGIPE 216
Query: 204 SAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLG- 262
++MF GT HKG+ L++A + L LV G Y + LG
Sbjct: 217 DKVVLMFFGTPR---PHKGLEELIQAIYTTEELRNNQELTLVIGGIGKDLYSQKIAQLGK 273
Query: 263 --ISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMV---LIEAGASGKPVIGTN 317
+ +VIF G+V + P+ +SD+ ++P FG + L +A A + +I TN
Sbjct: 274 KLLGDKVIFIGHVPFEETPKAVVASDIYIIPQKKTYASFGQLPAKLFDAMAMARAIISTN 333
Query: 318 VGGIKHVIENGKTGILVPPKD-PFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKI 376
V I +++ GI++ + L+E I+ L+ + + ARK+G RR + Y ++ +
Sbjct: 334 VSDIPRILDG--VGIVISSETLEKNLSEEILYLVENLDEARKLGTKARRRFVKLYGFNPM 391
Query: 377 VEKTEIALK 385
+K E L+
Sbjct: 392 RKKLERILR 400
>gb|AAD19925.1| (AF105116) putative glucosyl transferase [Streptococcus pneumoniae]
Length = 369
Score = 75.7 bits (183), Expect = 9e-13
Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 17/185 (9%)
Query: 209 MFIGTMNRGHAHKGVPYLLKAFKYVATQVK-DSYLVLVGRGDMIPEYKKMCMSLGISKRV 267
+FIG + KG + AF Y+ + ++ L ++G D+ E+ + V
Sbjct: 197 LFIG---KDFFRKGGDLVYNAFVYLQNNLMPEAELYIIGPSDVPMEFN--------NPNV 245
Query: 268 IFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIEN 327
F G + D + FY DV VLPS E FG+V +EA G P IG ++ + ++I+N
Sbjct: 246 YFLGNLSADKVQYFYNLCDVFVLPSRF--EAFGIVFVEALCYGLPCIGRDLMEMPNLIQN 303
Query: 328 GKTGILVPPKD--PFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTEIALK 385
+TG+L+P ++ P LA+ + L+ D++ + + +T + + EYSWD + ++ +K
Sbjct: 304 NETGLLLPTEEENPQVLADVMYNLIKDESFFKNV-QTKQDYYKAEYSWDTVAKRMISIMK 362
Query: 386 AIVNH 390
+N+
Sbjct: 363 QDMNN 367
>pir||E81824 alpha 1,2 N-acetylglucosamine transferase NMA1959 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7380591|emb|CAB85179.1| (AL162757) alpha 1,2
N-acetylglucosamine transferase [Neisseria meningitidis
Z2491]
Length = 354
Score = 75.3 bits (182), Expect = 1e-12
Identities = 90/367 (24%), Positives = 153/367 (41%), Gaps = 36/367 (9%)
Query: 15 GGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAPHFIVSNTPISFNLP 74
GG E+Y Y +++ L R + + TA K N L + EV + + + + F+L
Sbjct: 17 GGGEQYVYDVSKALGLR--DCTMFTAVNKNNELMHRRFSEVSSVFTTRLHTLNGL-FSL- 72
Query: 75 LKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVKEGFPLDK 134
L + ++ + S + HT A ++ +LK + HN + +
Sbjct: 73 YALTRFIRKNRISHLMIHT------GKIAALSILLKKLTGVRLIFVKHNVVANK------ 120
Query: 135 VAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERYFPGKSYR 194
Y+ +Q+ +D I S Y FK+K + G+DT R+ P +
Sbjct: 121 -TDFYHRLIQKN----TDRFICVSRLVYDVQTADNPFKEKYRIVHNGIDTGRFPPPQEKP 175
Query: 195 LHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRG--DMIP 252
+ + + +I KG+ L++A + + L L G G D +
Sbjct: 176 DSRFFTVAYAGRI----------SPEKGLENLIEACVILHRKYPQIRLKLAGDGHPDYMC 225
Query: 253 EYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKP 312
K+ + G V F G+ E+ L FYR SDV+VLPS V E FG+ L EA
Sbjct: 226 RLKRDVSASGAEPFVSFEGFTEK--LASFYRQSDVVVLPSL-VPEAFGLSLCEAMYCRTA 282
Query: 313 VIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYS 372
VI +G K +IE+ ++GIL+ P LA+ I L+ + + G + V ++
Sbjct: 283 VISNTLGAQKEIIEHHQSGILLDRLTPESLADEIERLVLNPETKNALATAGHQCVANRFT 342
Query: 373 WDKIVEK 379
+ +K
Sbjct: 343 INHTADK 349
>sp|Q9R9N1|LPSE_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS GLYCOSYL TRANSFERASE LPSE
>gi|6224912|gb|AAF06009.1|AF193023_3 (AF193023) LpsE
[Sinorhizobium meliloti]
Length = 340
Score = 74.9 bits (181), Expect = 1e-12
Identities = 93/375 (24%), Positives = 166/375 (43%), Gaps = 45/375 (12%)
Query: 4 LMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAPHFI 63
+ +T + + + GG E++ + L ERG E I +G ++EG IR +
Sbjct: 1 MKVTHFHFGKDGGAERFFVHLVNALAERGVEQTAIIRPGRGWR-RDIEGAAKIRESHFRN 59
Query: 64 VSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHN 123
+S I LPLK+ + + E+ V+ A P + L + K F ++
Sbjct: 60 LSLDRIL--LPLKVKHMARREKPDVLMAWAPRA----------SELMPNYKGAFKISRLG 107
Query: 124 DLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVD 183
D +P +++Y N +D I+ +P L +K+++ I
Sbjct: 108 D-----YPT-RLSYFRN----------TDCIVCNTPGIAERVSDLG-WKREIRVISNFTG 150
Query: 184 TERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLV 243
T R +L + P A +VM +M R KG L++A ++ YL
Sbjct: 151 TGRVVAVDRAKLDT----PADAPVVM---SMGRFVERKGFHTLIEA----VARLPGVYLW 199
Query: 244 LVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVL 303
L+G G+ K+ LG+S RV F G+ ++D P F + DV V+ S+ E G V+
Sbjct: 200 LLGDGEERDNLHKLATDLGVSGRVRFAGW-QDDTRP-FLAAVDVFVMSSS--HEPLGNVI 255
Query: 304 IEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTG 363
+E+ A G PV+ T G + + +G+ G++V D A AI ++ D++L ++ + G
Sbjct: 256 LESWAQGTPVVSTRSEGPQWFMRDGENGLMVDIGDAEGFARAIEQIVADNSLRTRLAERG 315
Query: 364 RRLVEREYSWDKIVE 378
+ ++S + I +
Sbjct: 316 HETLVGQFSREAITD 330
>gb|AAK42865.1| Glycosyltransferase, putative [Sulfolobus solfataricus]
Length = 437
Score = 74.5 bits (180), Expect = 2e-12
Identities = 71/270 (26%), Positives = 112/270 (41%), Gaps = 37/270 (13%)
Query: 116 PFVLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKL 175
P VL YH V E +L L++LS E + K K+
Sbjct: 166 PAVLWYHIPFVPENLSRKLKEFLIKAFESFDLVILSTKRDL-------EGLVRTGAKVKV 218
Query: 176 IWIPPGVDTERYFPGKSYRLHSI---YNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKY 232
I P +D Y + I Y L K+++ + M+ K + A K
Sbjct: 219 KQIYPFIDPSSYKTVGRKEIQYIEDKYQLKSDDKVILVVARMD---PMKSQDLAISAIKN 275
Query: 233 VATQVKDSYLVLVGRGDM-------------IPEYKKMCMSLGISKRVIFTGYVEEDILP 279
V D+ LVL G G + K++ SLG+ +V+FTGYV ++ L
Sbjct: 276 V-----DAKLVLAGDGSFTSKTLGHDKGSMWVSRLKELARSLGVENKVVFTGYVPDEELF 330
Query: 280 EFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDP 339
Y+ ++V++LPS EGFG+ + E GKP + ++ GI +I G G + +
Sbjct: 331 ALYQRANVVLLPSRI--EGFGLAVCEGWVYGKPAVVSSGAGISELIIEGGNGFVFKSGNI 388
Query: 340 FRLAEAIVTLLTDDNLARKIGKTGRRLVER 369
LAE + L D+ K+G G+ V++
Sbjct: 389 DELAEKLKLALKDE----KVGSLGKETVKK 414
>pir||S75935 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001295|dbj|BAA10782.1| (D64006) sucrose phosphate
synthase [Synechocystis sp.]
Length = 720
Score = 74.5 bits (180), Expect = 2e-12
Identities = 81/335 (24%), Positives = 142/335 (42%), Gaps = 58/335 (17%)
Query: 97 YYADVSAWVNNVLKGSNKTPFVLTYHN-------DLVKEGFPLDKVAYLYNLS----LQR 145
+YAD + +V L P V T H+ L+ G D++ YN++ +
Sbjct: 126 HYAD-AGYVGTRLSHQLGIPLVHTGHSLGRSKRTRLLLSGIKADEIESRYNMARRINAEE 184
Query: 146 GLLLLSDTIITPS---------PYCYYESKLLRRFKKKLIWIPPGVDTERYFPGKS---- 192
L + +IT + Y YY+ +++ IPPG D E+++P K
Sbjct: 185 ETLGSAARVITSTHQEIAEQYAQYDYYQPD-------QMLVIPPGTDLEKFYPPKGNEWE 237
Query: 193 ----YRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAF-KYVATQVKDSYLVLVGR 247
L PR I+ ++R K + L+ A+ + Q + + +++ G
Sbjct: 238 TPIVQELQRFLRHPRKPIIL----ALSRPDPRKNIHKLIAAYGQSPQLQAQANLVIVAGN 293
Query: 248 GDMI------PEYKKMCMSLGISKRVIF--TGYVEEDILPEFYR-------SSDVIVLPS 292
D I P + L I + ++ Y +++ + Y S V + P+
Sbjct: 294 RDDITDLDQGPREVLTDLLLTIDRYDLYGKVAYPKQNQAEDVYALFRLTALSQGVFINPA 353
Query: 293 TTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTD 352
T E FG+ LIEA A G P++ T GG +I+N + G L+ P D +A+ ++ +L D
Sbjct: 354 LT--EPFGLTLIEAAACGVPIVATEDGGPVDIIKNCQNGYLINPLDEVDIADKLLKVLND 411
Query: 353 DNLARKIGKTGRRLVEREYSWDKIVEKTEIALKAI 387
+ + ++G V+R YSW VE A+ A+
Sbjct: 412 KQQWQFLSESGLEGVKRHYSWPSHVESYLEAINAL 446
>gb|AAD46732.1|AF078736_12 (AF078736) putative glycosyl transferase [Escherichia coli]
Length = 374
Score = 74.5 bits (180), Expect = 2e-12
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 172 KKKLIWIPPGVDTERYFPGKSYR--LHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKA 229
K K++ IP ++T ++ + R +NL S +++ +G + K P LL A
Sbjct: 153 KNKIVEIPNFINTNKFDFDINVRKKTRDAFNLKDSTAVLLAVGRLVEA---KDYPNLLNA 209
Query: 230 FKYV----ATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSS 285
++ + D L++ G G + + + L + +V F G + + E ++
Sbjct: 210 INHLILSKTSNCNDFILLIAGDGALRNKLLDLVCQLNLVDKVFFLG--QRSDIKELMCAA 267
Query: 286 DVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEA 345
D+ VL S EGFG+V+ EA A +PV+ T+ GG+K V+ G ++P + LAE
Sbjct: 268 DLFVLSSEW--EGFGLVVAEAMACERPVVATDSGGVKEVV--GPHNDVIPVSNHILLAEK 323
Query: 346 IV-TLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTE 381
I TL DDN + IG R + +S IV + E
Sbjct: 324 IAETLKIDDNARKIIGMKNREYIVSNFSIKTIVSEWE 360
>pir||C81053 alpha-1,2-N-acetylglucosamine transferase NMB1705 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226960|gb|AAF42053.1| (AE002520)
alpha-1,2-N-acetylglucosamine transferase [Neisseria
meningitidis MC58]
Length = 354
Score = 74.5 bits (180), Expect = 2e-12
Identities = 89/367 (24%), Positives = 152/367 (41%), Gaps = 36/367 (9%)
Query: 15 GGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAPHFIVSNTPISFNLP 74
GG E+Y Y +++ L RG + TA K N L + EV + + + + F+L
Sbjct: 17 GGGEQYVYDVSKALGLRG--CTMFTAVNKNNELMHRRFSEVSSVFTTRLHTLNGL-FSL- 72
Query: 75 LKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVKEGFPLDK 134
L + ++ + S + HT A ++ +LK + HN + +
Sbjct: 73 YALTRFIRKNRISHLMIHT------GKIAALSILLKKLTGVRLIFVKHNVVANK------ 120
Query: 135 VAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERYFPGKSYR 194
Y+ +Q+ +D I S Y FK+K + G+DT R+ P +
Sbjct: 121 -TDFYHRLIQKN----TDRFICVSRLVYDVQTADNPFKEKYRIVHNGIDTGRFPPSQEKP 175
Query: 195 LHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRG--DMIP 252
+ + + +I KG+ L++A + + L L G G D +
Sbjct: 176 DSRFFTVAYAGRI----------SPEKGLENLIEACVILHRKYPQIRLKLAGDGHPDYMC 225
Query: 253 EYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKP 312
K+ + G V F G+ E+ L FYR SDV+VLPS V E FG+ L EA
Sbjct: 226 RLKRDVSASGAEPFVSFEGFTEK--LASFYRQSDVVVLPSL-VPEAFGLSLCEAMYCRTA 282
Query: 313 VIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYS 372
VI +G K ++E+ ++GIL+ P LA+ I L+ + + + V ++
Sbjct: 283 VISNTLGAQKEIVEHHQSGILLDRLTPESLADEIERLVLNPETKNALATAAHQCVAARFT 342
Query: 373 WDKIVEK 379
+ +K
Sbjct: 343 INHTADK 349
>emb|CAC04040.1| (AL391406) putative transferase [Streptomyces coelicolor A3(2)]
Length = 496
Score = 74.5 bits (180), Expect = 2e-12
Identities = 66/229 (28%), Positives = 106/229 (45%), Gaps = 28/229 (12%)
Query: 174 KLIWIPPGVDTERYFPGKSYRL-------------HSIYNLPRSAKIVMFIGTMNRGHAH 220
K+ + PGV+ ER+ P R+ + LP+ A I +F G R
Sbjct: 254 KVAVVHPGVNLERFRPFPKGRVPGPGQHGNARAAARARLGLPQDALIPLFAG---RIQPL 310
Query: 221 KGVPYLLKAFKYVATQ---VKDSYLVLV-----GRGDMIPE-YKKMCMSLGISKRVIFTG 271
K LL+A + + ++ +V V G G PE +K+ LGI+ V F
Sbjct: 311 KAPDILLRAVAVLLDERPELRSRIVVPVVGGPSGSGLAKPEGLQKLAARLGIADVVRFRP 370
Query: 272 YVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTG 331
V ++ L +++R++ V+V+PS + E FG+V IEA A+G PV+ VGG+ + +G TG
Sbjct: 371 PVGQEQLADWFRAASVLVMPSYS--ESFGLVAIEAQAAGTPVLAAAVGGLPVAVRDGHTG 428
Query: 332 ILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKT 380
LV DP A + + +L ++G R + + WD T
Sbjct: 429 RLVHGHDPAAYARVLRDFADNPDLTPRMGDAAARHAQ-SFGWDSAAATT 476
>sp|Q43802|SPS_ORYSA SUCROSE-PHOSPHATE SYNTHASE (UDP-GLUCOSE-FRUCTOSE-PHOSPHATE
GLUCOSYLTRANSFERASE) >gi|2117724|pir||JC4783
sucrose-phosphate synthase (EC 2.4.1.14) - rice
>gi|988270|gb|AAC49379.1| (U33175) sucrose phosphate
synthase [Oryza sativa]
Length = 1049
Score = 74.1 bits (179), Expect = 3e-12
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 39/239 (16%)
Query: 170 RFKKKLIWIPPGVD---------TERYFPGKSYRLHSIYNLPRS-AKIVMFIGT------ 213
RF +++ IPPG+D T GK + + S +LP A+++ F+
Sbjct: 429 RFMPRMVVIPPGMDFSSVVVPEDTSDGDDGKDFEIASPRSLPPIWAEVMRFLTNPHKPMI 488
Query: 214 --MNRGHAHKGVPYLLKAFKYVATQVKDSYLVLV------------GRGDMIPEYKKMCM 259
++R K + L+KAF + + L+L+ G ++ K+
Sbjct: 489 LALSRPDPKKNITTLVKAFGECRPLRELANLILIMGNRDDIDEMSAGNASVLTTVLKLID 548
Query: 260 SLGISKRVIFTGYVEEDILPEFYRSSDVI--VLPSTTVQEGFGMVLIEAGASGKPVIGTN 317
+ V F + ++ +PE YR + + V + + E FG+ LIEA A G P++ T
Sbjct: 549 KYDLYGSVAFPKHHKQSDVPEIYRLTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVATK 608
Query: 318 VGG---IKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSW 373
GG IK+ + N G+LV P D +A+A++ L+ D NL ++ K G R ++ YSW
Sbjct: 609 NGGPVDIKNALNN---GLLVDPHDQHAIADALLKLVADKNLWQECRKNGLRNIQL-YSW 663
>pir||C71226 hypothetical protein PH0069 - Pyrococcus horikoshii
>gi|3256455|dbj|BAA29138.1| (AP000001) 456aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 456
Score = 74.1 bits (179), Expect = 3e-12
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 150 LSDTIITPSP-YCYYESKLLRRFKKKLIWIPPGVD----TERYFPG--KSYRLHSIYNLP 202
++D + T S Y E R F K+ ++ G+D E Y G K R +
Sbjct: 196 IADIVTTVSRGYLLDEWDFFRNFNGKVTYVFNGIDCSFWNENYLKGSRKERRSSILAKFG 255
Query: 203 RSAKIV-MFIGTMNRGHAHKGVPYLLKAFKYVAT--QVKDSYLVLVGRGDMIPEYKKMCM 259
S I MFIG +R KGV LL+A + ++ + K+ +++G GD PE +
Sbjct: 256 MSDGITFMFIGRFDR--RQKGVDTLLRAIELLSERPEFKEMRFIIIGMGD--PELENWAR 311
Query: 260 SLGISKRV----IFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIG 315
L KR + T + + + E Y S D +++PS E FG+V +EA G I
Sbjct: 312 EL--EKRYDNVRVLTEMLSREFVRELYGSVDFVIIPSYF--EPFGLVSLEAMCLGAIPIA 367
Query: 316 TNVGGIKHVIEN------GKTGILVPPKDPFRLAEAIV---TLLTDDNLARKIGKTGRRL 366
++VGG++ VI + TG+LV P DP+ LA AI+ ++ D+ K+ ++
Sbjct: 368 SSVGGLRDVIVSIDEDHVDGTGLLVKPGDPWDLANAILRMHSIAMDNEFVEKLRDNCKKR 427
Query: 367 VEREYSWDKIVEKTEIALKAIVN 389
+ +SW+ ++ A K ++
Sbjct: 428 A-KSFSWENSAKRYLRAYKGNID 449
>gb|AAD46728.1|AF078736_2 (AF078736) putative glycosyl transferase [Escherichia coli]
Length = 397
Score = 74.1 bits (179), Expect = 3e-12
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 10/177 (5%)
Query: 199 YNLPRSAKIV-MFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEY--- 254
Y P KI +FI + R KG+ ++A K+V T S V++G + +
Sbjct: 208 YKEPPKEKITFIFIARLLR---EKGIFEFIEAAKFVKTTYPSSEFVILGGFESNNPFSLQ 264
Query: 255 KKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVI 314
K SL +I+ G+VE + ++ S V VLP T+ +EG V+ EA A G+PVI
Sbjct: 265 KNEIESLRKEHDLIYPGHVEN--VQDWLEKSSVFVLP-TSYREGVPRVIQEAMAIGRPVI 321
Query: 315 GTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREY 371
TNV G + +I +G G L+PP + LAE + + + + ++G GR+ E+ +
Sbjct: 322 TTNVPGCRDIINDGVNGFLIPPFEINLLAEKMKYFIENKDKVLEMGLAGRKFAEKNF 378
>pir||E70156 lipopolysaccharide biosynthesis-related protein homolog - Lyme
disease spirochete >gi|2688362|gb|AAC66815.1| (AE001150)
lipopolysaccharide biosynthesis-related protein
[Borrelia burgdorferi]
Length = 383
Score = 73.4 bits (177), Expect = 4e-12
Identities = 82/380 (21%), Positives = 159/380 (41%), Gaps = 39/380 (10%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITA-SRKGNSLENLEGIEVIRLA 59
MK+ + T + PE G+ I G + G+EV + S+K + +N+ I++
Sbjct: 1 MKVAIFTDTYIPEKNGVATSIKQIKEGFEKNGYEVYIFCPKSKKSLNEKNVYRCSSIQIN 60
Query: 60 PHFIVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVL 119
+ I+F K+ K+ + + +I+ H+ + + + P V
Sbjct: 61 KKL---DAVIAFPNKRKISKIIQSYKPDIIHTHSEFSM-----GKIGKQIALKHNIPIVH 112
Query: 120 TYHNDLVKEGFPLDKVAYLYNLSLQRGLL----LLSDTIITPSPYCYYESKLLRRF---- 171
T H YL+ L + + + ++ + Y SK R+
Sbjct: 113 TSHTMWDY---------YLHYLGIFKYFIKPDKMMRKHYNKIKHFIYPSSKAKERYFQLS 163
Query: 172 --KKKLIWIPPGVDTERYFPG----KSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPY 225
IP GVD + + K + +N+ ++ KI++F+G +N+ K +
Sbjct: 164 NNSSNYKIIPNGVDRKLFIKTLSKEKKDEILKKHNIKQTDKIIIFVGRINK---EKNINL 220
Query: 226 LLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSS 285
L+ K + Q + L+L+G+G E K + G+ K+++ G + + + +Y+ S
Sbjct: 221 LVTHLKDLLMQNNNYKLILIGKGSEEKEIKNFSIKHGLEKQILLIGTIPWEEIYYYYKIS 280
Query: 286 DVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEA 345
D+ S + E + M +IEA +G P I N K VI+ G G L+ K L+
Sbjct: 281 DIFA--SLSKSEVYPMTVIEALTAGIPAILINDYIYKDVIKEGINGFLI--KKYENLSRY 336
Query: 346 IVTLLTDDNLARKIGKTGRR 365
I ++ DD + +K + ++
Sbjct: 337 IDKVIKDDEILKKFKENAKK 356
>gb|AAD28801.1| (U52844) putative glycosyltransferase [Serratia marcescens]
Length = 375
Score = 73.4 bits (177), Expect = 4e-12
Identities = 82/364 (22%), Positives = 152/364 (41%), Gaps = 48/364 (13%)
Query: 3 LLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAPHF 62
LL I Y GG E++ + L ++ ++ VIT +G++ N I L
Sbjct: 5 LLAIVRRKYRPDGGAERFVSRALKALEQQDLDLNVITREWQGDANPNWH----IHLCNPL 60
Query: 63 IVSNTPISFNLPLKLIKVFKEEQFSVINAHTPVP----YYADVSAWVNNVLKGSNKTP-- 116
+ + ++++E+F ++ +H +P Y A +L+ + P
Sbjct: 61 KLGRISRERGFAVAARALWQKERFDLVQSHERIPGCDIYRAGDGVHRRWLLQRARLLPEW 120
Query: 117 -----FVLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRF 171
F YH Y + +R + + + +++ F
Sbjct: 121 RRKWLFSNRYHR---------------YVMCAERAMYAAPELKAVICNAEMIKREIIADF 165
Query: 172 ---KKKLIWIPPGVDTERYFPG---KSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPY 225
K+ I +D +++ P + RL Y +P+ A ++F+G+ G KG+
Sbjct: 166 GVPADKITVIYNAIDNQKFPPADEAQRRRLREQYQIPQQAHCLIFVGS---GFERKGLAA 222
Query: 226 LLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSS 285
++A DS+L++VG+ Y+ + SLG R+ F G V++ LP FY+++
Sbjct: 223 AIRA-----VAATDSHLLVVGKDKAEKRYRALAQSLGCGDRIHFMG-VQKQTLP-FYQAA 275
Query: 286 DVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEA 345
D ++LP T+ + F V++EA + G PVI + G I G+ G + D + EA
Sbjct: 276 DALLLP--TLYDPFPNVILEAMSCGLPVITSTTCGGAEFITPGQNGFVTDALDVPAITEA 333
Query: 346 IVTL 349
I L
Sbjct: 334 IRAL 337
>sp|Q48453|YC07_KLEPN HYPOTHETICAL 41.2 KD PROTEIN IN CPS REGION (ORF7)
>gi|747666|dbj|BAA04778.1| (D21242) ORF7 [Klebsiella
pneumoniae]
Length = 358
Score = 73.0 bits (176), Expect = 6e-12
Identities = 80/282 (28%), Positives = 135/282 (47%), Gaps = 34/282 (12%)
Query: 72 NLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHN-DLVKEGF 130
+L L +IK K +F VI+ H+ + V A L K + T H + +
Sbjct: 61 SLFLVIIKTLKYNKFDVIHLHSSFAGFI-VRALFAFKLINKKKYKVIYTPHCFSFIMDTK 119
Query: 131 PLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKL-----LRRFKKKLIWIPPGVDTE 185
K Y+Y ++R L +D II S YYE K + + K K+++ +D +
Sbjct: 120 KWKKKVYIY---IERILAKQTDCIIANS---YYEYKCAVDAGISKNKIKVVYNAVSLDGQ 173
Query: 186 RYFPGKSYRLHSIY-NLPRSAKI-VMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLV 243
K R+ N + KI ++F+G ++ KG YLL K VA K ++ +
Sbjct: 174 E----KLERIKKCNENEVQKEKINILFVGRFDK---QKGYDYLLNVIK-VADVSKYTFNI 225
Query: 244 LVGRGDMIPE-YKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMV 302
+ GD + + ++K+ + V++ G+V+ LP ++ +DV+++PS E FG+V
Sbjct: 226 I---GDSVHDVFEKI-----EKENVVYYGWVDNKELPAYFCENDVLLMPSRW--ESFGLV 275
Query: 303 LIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAE 344
+EA G PVI NV + VI +G TG+LV +D ++ E
Sbjct: 276 AVEAQLYGVPVIANNVASLPEVISDGLTGMLVNFEDANKVVE 317
>emb|CAB93438.1| (AL357591) putative glycosyl transferase [Streptomyces coelicolor
A3(2)]
Length = 498
Score = 73.0 bits (176), Expect = 6e-12
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
Query: 221 KGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPE 280
KG+ +L++A T+ ++LV+VG+ + G++ V F + + L +
Sbjct: 267 KGLVFLVEALAKARTEHPRAHLVVVGKRPAEGPVAQAIERYGLAGAVEFVKGISDAELVD 326
Query: 281 FYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVI-ENGKTGILVPPKDP 339
RS++V +PS + EGF + EA A+G ++ T G + V +G+T + VPP D
Sbjct: 327 LVRSAEVACVPS--LYEGFSLPAAEAMATGTALLATTGGAVPEVAGPDGETCLAVPPGDA 384
Query: 340 FRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKT 380
LA + LL D +L ++G GR V R ++W + E T
Sbjct: 385 DALAAGLNRLLGDRSLRARLGAAGRERVLRHFTWARAAEGT 425
>pir||A82265 probable polysaccharide biosynthesis protein VC0925 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655382|gb|AAF94087.1| (AE004175) polysaccharide
biosynthesis protein, putative [Vibrio cholerae]
Length = 365
Score = 73.0 bits (176), Expect = 6e-12
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Query: 211 IGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFT 270
I + R KGV L++AF V + ++ L L G G+ I Y+ M LG++ V
Sbjct: 189 IAFLGRLGTRKGVGDLIQAFALVKQRCPEAQLYLAGDGE-IETYQAMAEQLGLNGSVHCL 247
Query: 271 GYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKT 330
G++ + + +D+ LPS EGF M +IEA ++G PV+ + GGI I +G+
Sbjct: 248 GWIAGEAKLKLLTQTDIYCLPS--YNEGFPMGVIEAMSAGIPVVASRAGGIPDAISDGEQ 305
Query: 331 GILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTE 381
G L+ D LA+A+ L+ ++I ++ +S ++ + +
Sbjct: 306 GRLIEAGDVVALAQALGDLIEQRAENQRIATAAKQKFAENFSLQAVIPRLQ 356
>gb|AAG18698.1| (AE004975) LPS glycosyltransferase; Lpg [Halobacterium sp. NRC-1]
Length = 333
Score = 73.0 bits (176), Expect = 6e-12
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 181 GVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDS 240
G+D + Y P K++ H + T+ R KG L++ + + D
Sbjct: 144 GIDVKEYQPSKTHPSHENIT----------VSTVGRLANVKGYDDLIRCARDIGD---DL 190
Query: 241 YLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFG 300
+ G G+ ++ + V F G V + +P+F +SD+ PS EG
Sbjct: 191 QFQIAGEGE-----ERERLESKTPDNVNFQGMVPNEQIPQFLNNSDIYFQPSK--YEGLC 243
Query: 301 MVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIG 360
M +IEA A G PV+ ++VGGI + G+TG L P+D +E + L + L +++G
Sbjct: 244 MAVIEAMACGLPVVASDVGGITESVVPGETGFLCRPRDIDCFSERLQQLSENPALRKQMG 303
Query: 361 KTGRRLVEREYS-------WDKIVEKTE 381
GR+ V EYS + K +++TE
Sbjct: 304 TAGRKRVISEYSQKALARQFRKAIDQTE 331
>pir||A69989 probable hexosyltransferase (EC 2.4.1.-) ytcC - Bacillus subtilis
>gi|2293287|gb|AAC00365.1| (AF008220) YtcC [Bacillus
subtilis] >gi|2635572|emb|CAB15066.1| (Z99119) similar
to lipopolysaccharide N-acetylglucosaminyltransferase
[Bacillus subtilis]
Length = 407
Score = 72.6 bits (175), Expect = 7e-12
Identities = 69/297 (23%), Positives = 133/297 (44%), Gaps = 34/297 (11%)
Query: 110 KGSNKTPFVLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLR 169
K S + VL+ HN++ E ++ +G +L + + + + + ++
Sbjct: 97 KASPNSKIVLSLHNEMFSEK----------KMTFAQGKEVLDNVSMITTVSEFIKQTVIE 146
Query: 170 RFKK-----KLIWIPPGVDTERYFPGKSYRLHSIYNLPRSA------KIVMFIGTMNRGH 218
RF + K+++ GVD Y P + + ++ R K+++F G ++
Sbjct: 147 RFPEAEDITKVVY--SGVDLNSYPPVWTMKGSAVRKTYRKKYGIEDKKVILFAGRLS--- 201
Query: 219 AHKGVPYLLKAFKYVATQVKDSYLVLVG----RGDMIPEYKKMCMSLGISKR--VIFTGY 272
KG L+ + + + Q D+ LV+ G D +Y +L + R +IFT +
Sbjct: 202 PTKGPHLLIHSMRRILQQHPDAVLVIAGGKWFSDDSENQYVTYLRTLALPYRDHIIFTKF 261
Query: 273 VEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGI 332
+ D +P + +DV V S+ E V EA A+G P+I TN GG V+++ TG+
Sbjct: 262 IPADDIPNLFLMADVFVC-SSQWNEPLARVNYEAMAAGTPLITTNRGGNGEVVKHEVTGL 320
Query: 333 LVPP-KDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTEIALKAIV 388
++ P A+AI TD L K+ K R+ VE +++ ++ ++++
Sbjct: 321 VIDSYNKPSSFAKAIDRAFTDQELMNKMTKNARKHVEALFTFTHAAKRLNTVYQSVL 377
>gi|9755344 N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein;
Spt14p [Saccharomyces cerevisiae]
>gi|1170001|sp|P32363|GPI3_YEAST
N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC
PROTEIN (GLCNAC-PI SYNTHESIS PROTEIN)
>gi|441475|emb|CAA44924.1| (X63290) trans-acting
transcription factor [Saccharomyces cerevisiae]
Length = 452
Score = 72.2 bits (174), Expect = 1e-11
Identities = 75/333 (22%), Positives = 143/333 (42%), Gaps = 20/333 (6%)
Query: 3 LLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGN-SLENL-EGIEVIRLAP 60
+ M+ +FYP+ GG+E + Y +++ L++ G V +IT + K + +L G++V + P
Sbjct: 5 IAMLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHV-P 63
Query: 61 HFIV---SNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPF 117
F++ + P F+ + + EQ ++++H S + + + +N T
Sbjct: 64 FFVIFRETTFPTVFSTFPIIRNILLREQIQIVHSH------GSASTFAHEGILHAN-TMG 116
Query: 118 VLTYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIW 177
+ T D GF + + ++ L L D +I S C + +I
Sbjct: 117 LRTVFTDHSLYGF--NNLTSIWVNKLLTFTLTNIDRVICVSNTCKENMIVRTELSPDIIS 174
Query: 178 IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQV 237
+ P F + + R +++ IG R +KG L + V +
Sbjct: 175 VIPNAVVSEDFKPRDPTGGTKRKQSRDKIVIVVIG---RLFPNKGSDLLTRIIPKVCSSH 231
Query: 238 KDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQE 297
+D ++ G G ++++M S + KRV G V + + + D+ + S T E
Sbjct: 232 EDVEFIVAGDGPKFIDFQQMIESHRLQKRVQLLGSVPHEKVRDVLCQGDIYLHASLT--E 289
Query: 298 GFGMVLIEAGASGKPVIGTNVGGIKHVIENGKT 330
FG +L+EA + ++ T VGGI V+ N T
Sbjct: 290 AFGTILVEAASCNLLIVTTQVGGIPEVLPNEMT 322
>pir||S51264 probable galactosyltransferase trsE - Yersinia enterocolitica
>gi|633696|emb|CAA87702.1| (Z47767) WbcN [Yersinia
enterocolitica]
Length = 344
Score = 72.2 bits (174), Expect = 1e-11
Identities = 86/313 (27%), Positives = 140/313 (44%), Gaps = 39/313 (12%)
Query: 76 KLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTP-FVLTYHNDLVKEGFPLDK 134
K+IK FK + ++++H ++A++ A +L+ K P + T HN EG L
Sbjct: 48 KIIKKFKPD---IVHSHM---FHANLFA---RILRVFTKIPALICTAHN--TNEGSSLRM 96
Query: 135 VAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERYFPGKSYR 194
+AY Y L +S + + S ++I + G+D ++ R
Sbjct: 97 LAYKYTDKLASLSTNVSQDAVDSFIHKGASST------GRMIAVSNGIDASQFDFSMDER 150
Query: 195 L--HSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDS------YLVLVG 246
S + I++ +G + K P LL AF + +KD+ L +VG
Sbjct: 151 KVKRSELGIFNDTPIILSVGRLTEA---KDYPNLLTAFSLL---IKDNSLQSFPQLFIVG 204
Query: 247 RGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEA 306
G + K M GI K V G +DIL + ++D+ VL S EGF +V+ EA
Sbjct: 205 TGHLDGYLKNMSKEFGIDKYVTLFGQ-RDDIL-QLMCAADIFVLSSEW--EGFPLVITEA 260
Query: 307 GASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLL-TDDNLARKIGKTGRR 365
A K ++ T+ GGI + G G +VP KDP L++AI ++ DN +G R
Sbjct: 261 MACKKIIVATDAGGITEAL--GDCGSIVPIKDPNSLSQAINKMIKLSDNEKEILGNKARE 318
Query: 366 LVEREYSWDKIVE 378
+ + S +KI+E
Sbjct: 319 RIIQTNSIEKIIE 331
>prf||1804343A SPT14 gene [Saccharomyces cerevisiae]
Length = 415
Score = 71.8 bits (173), Expect = 1e-11
Identities = 75/331 (22%), Positives = 142/331 (42%), Gaps = 20/331 (6%)
Query: 5 MITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGN-SLENL-EGIEVIRLAPHF 62
M+ +FYP+ GG+E + Y +++ L++ G V +IT + K + +L G++V + P F
Sbjct: 1 MLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHV-PFF 59
Query: 63 IV---SNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVL 119
++ + P F+ + + EQ ++++H S + + + +N T +
Sbjct: 60 VIFRETTFPTVFSTFPIIRNILLREQIQIVHSH------GSASTFAHEGILHAN-TMGLR 112
Query: 120 TYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIP 179
T D GF + + ++ L L D +I S C + +I +
Sbjct: 113 TVFTDHSLYGF--NNLTSIWVNKLLTFTLTNIDRVICVSNTCKENMIVRTELSPDIISVI 170
Query: 180 PGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKD 239
P F + + R +++ IG R +KG L + V + +D
Sbjct: 171 PNAVVSEDFKPRDPTGGTKRKQSRDKIVIVVIG---RLFPNKGSDLLTRIIPKVCSSHED 227
Query: 240 SYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGF 299
++ G G ++++M S + KRV G V + + + D+ + S T E F
Sbjct: 228 VEFIVAGDGPKFIDFQQMIESHRLQKRVQLLGSVPHEKVRDVLCQGDIYLHASLT--EAF 285
Query: 300 GMVLIEAGASGKPVIGTNVGGIKHVIENGKT 330
G +L+EA + ++ T VGGI V+ N T
Sbjct: 286 GTILVEAASCNLLIVTTQVGGIPEVLPNEMT 316
>pir||S76544 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001656|dbj|BAA10390.1| (D64002) mannosyl
transferase [Synechocystis sp.]
Length = 365
Score = 71.8 bits (173), Expect = 1e-11
Identities = 64/207 (30%), Positives = 98/207 (46%), Gaps = 20/207 (9%)
Query: 174 KLIWIPPGVDTERYFPGKSYRLHSIYNL-PRSAKIVMFIGTMNRGHAHKGVPYLLKAF-K 231
K+ I G D E + PG+ NL PR +F+G R HK V L++AF +
Sbjct: 161 KITAIALGYDREHFQPGQD-------NLAPRKKPYFLFVG---RHDPHKNVGRLIQAFAR 210
Query: 232 YVA-TQVKDSYLVLVGRGDM--IPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVI 288
+V T +D L+L G D P+ + LG+ V YV D L + YR + +
Sbjct: 211 FVQNTNSQDIELILAGPTDRRYTPKLMALATELGVGTEVHCLDYVSYDQLRQLYRQAIAL 270
Query: 289 VLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVT 348
V PS + EGFG ++EA A G VI ++V + V G +LV P + +A+
Sbjct: 271 VFPS--LWEGFGFPVLEAMACGTAVITSSVSSLPEV--GGDAVLLVDPYSIKEIYQAMEQ 326
Query: 349 LLTDDNLARKIGKTGRRLVEREYSWDK 375
+ D L +++ + RE+SW+K
Sbjct: 327 VWKDRRLCQQLQQQSLARA-REFSWEK 352
>pir||S65187 GPI-anchor biosynthesis protein PIG-A - yeast (Saccharomyces
cerevisiae) >gi|1370369|emb|CAA97882.1| (Z73531) ORF
YPL175w [Saccharomyces cerevisiae]
Length = 461
Score = 71.8 bits (173), Expect = 1e-11
Identities = 75/331 (22%), Positives = 142/331 (42%), Gaps = 20/331 (6%)
Query: 5 MITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGN-SLENL-EGIEVIRLAPHF 62
M+ +FYP+ GG+E + Y +++ L++ G V +IT + K + +L G++V + P F
Sbjct: 16 MLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHV-PFF 74
Query: 63 IV---SNTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPFVL 119
++ + P F+ + + EQ ++++H S + + + +N T +
Sbjct: 75 VIFRETTFPTVFSTFPIIRNILLREQIQIVHSH------GSASTFAHEGILHAN-TMGLR 127
Query: 120 TYHNDLVKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIP 179
T D GF + + ++ L L D +I S C + +I +
Sbjct: 128 TVFTDHSLYGF--NNLTSIWVNKLLTFTLTNIDRVICVSNTCKENMIVRTELSPDIISVI 185
Query: 180 PGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKD 239
P F + + R +++ IG R +KG L + V + +D
Sbjct: 186 PNAVVSEDFKPRDPTGGTKRKQSRDKIVIVVIG---RLFPNKGSDLLTRIIPKVCSSHED 242
Query: 240 SYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGF 299
++ G G ++++M S + KRV G V + + + D+ + S T E F
Sbjct: 243 VEFIVAGDGPKFIDFQQMIESHRLQKRVQLLGSVPHEKVRDVLCQGDIYLHASLT--EAF 300
Query: 300 GMVLIEAGASGKPVIGTNVGGIKHVIENGKT 330
G +L+EA + ++ T VGGI V+ N T
Sbjct: 301 GTILVEAASCNLLIVTTQVGGIPEVLPNEMT 331
>pir||S22619 hypothetical protein 17.9 - Salmonella choleraesuis
>gi|47011|emb|CAA43913.1| (X61917) second mannosyl
transferase [Salmonella enterica]
Length = 336
Score = 71.0 bits (171), Expect = 2e-11
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 220 HKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILP 279
HK ++ AF A D + LV G+ + +K+ + G+S+RV F G+V E LP
Sbjct: 172 HKNEKCVISAF---AKADIDPSIKLVFTGNPCNDLEKLIIQHGLSERVKFFGFVSEKDLP 228
Query: 280 EFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDP 339
Y+ S +V PS + EGFG+ ++E A G PV+ + + V G ILV P
Sbjct: 229 SLYKGSLGLVFPS--LYEGFGLPVVEGMACGIPVLTSLTSSLPEVA--GDAAILVDPLSE 284
Query: 340 FRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKTEIAL 384
+ + I L+ D L + + + G L + ++W +V + E+ L
Sbjct: 285 DAITKGISRLINDSELRKHLIQKG-LLRAKRFNWQNVVSEIEMVL 328
>pir||F64175 hypothetical protein HI1698 (lsg locus) - Haemophilus influenzae
>gi|1574551|gb|AAC23344.1| (U32842) lipopolysaccharide
biosynthesis protein [Haemophilus influenzae Rd]
Length = 353
Score = 70.2 bits (169), Expect = 4e-11
Identities = 49/166 (29%), Positives = 85/166 (50%), Gaps = 8/166 (4%)
Query: 217 GH--AHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVE 274
GH ++KG YLLK ++ +A + D L +VG G+ K + +L I V F
Sbjct: 188 GHLFSYKGFDYLLKVWQVLAKKYPDWNLKIVGSGEEEENLKNLAKALDIEDSVNFIPRTN 247
Query: 275 EDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVG-GIKHVIENGKTGIL 333
+ + +Y SS + LPS T EG +V+IEA A G P++ N G+K ++E+ + G L
Sbjct: 248 D--VSFYYESSSIYCLPSQT--EGLPLVVIEAMAFGLPIVAFNCSPGVKQLVEHKENGFL 303
Query: 334 VPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEK 379
+ + + + L+ + L ++ RL+ +Y +KI+E+
Sbjct: 304 CEQNNIEEMVKGLDLLINNPELYLQMSDKS-RLMSEDYGIEKIIEE 348
>gb|AAC45156.1| (U39810) LPS glycosyltransferase IcsA [Neisseria meningitidis]
Length = 333
Score = 70.2 bits (169), Expect = 4e-11
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 151 SDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMF 210
+D I S Y FK+K + G+DT R+ P + + + + +I
Sbjct: 111 TDRFICVSRLVYDVQTADNPFKRKYRIVHNGIDTGRFPPSQEKPDRRFFTVAYAGRI--- 167
Query: 211 IGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRG--DMIPEYKKMCMSLGISKRVI 268
KG+ L++A + + L L G G D + K+ + G V
Sbjct: 168 -------SPEKGLENLIEACVILHRKYPQIRLKLAGDGHPDYMCRLKRDVSASGAEPFVS 220
Query: 269 FTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENG 328
F G+ E+ L FYR SDV+VLPS V E FG+ L EA VI +G K ++E+
Sbjct: 221 FEGFTEK--LASFYRQSDVVVLPSL-VPEAFGLSLCEAMYCRTAVISNTLGAQKEIVEHH 277
Query: 329 KTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEK 379
++GIL+ P LA+ I L+ + + + V ++ + +K
Sbjct: 278 QSGILLDRLTPESLADEIERLVLNPETKNALATAAHQCVAARFTINHTADK 328
>pir||S74765 mannosyltransferase B - Synechocystis sp. (strain PCC 6803)
>gi|1651990|dbj|BAA16916.1| (D90901) mannosyltransferase
B [Synechocystis sp.]
Length = 367
Score = 70.2 bits (169), Expect = 4e-11
Identities = 51/162 (31%), Positives = 83/162 (50%), Gaps = 6/162 (3%)
Query: 220 HKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMS-LGISKRVIFTGYVEEDIL 278
+K LL AF+ V + K + L+L G +K + LG+SK V+ G + L
Sbjct: 203 YKNFDQLLLAFQKVTAKPKYADLLLCVVGSPFENQEKERLEFLGLSKNVVHYGRATDGQL 262
Query: 279 PEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKD 338
+ Y S V PS + EGFG+ +EA A G VIG+NV I V+ G G+L PK
Sbjct: 263 AKLYNQSIAFVYPS--LYEGFGIPPLEAMACGTAVIGSNVSSIPEVV--GDAGLLFDPKS 318
Query: 339 PFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKT 380
+L + ++ +L + + + G++ +++SWDK ++T
Sbjct: 319 MDQLVDQLLYVLENPIKRDSLIQKGKKQC-KKFSWDKTAQQT 359
>gb|AAG19109.1| (AE005009) Vng0598c [Halobacterium sp. NRC-1]
Length = 330
Score = 70.2 bits (169), Expect = 4e-11
Identities = 79/275 (28%), Positives = 117/275 (41%), Gaps = 24/275 (8%)
Query: 88 VINAHTPVPYYADVSAWVNNVLKGSNKTPFVLTYHNDLVK--EGFPLDKVAYLYNLS--- 142
V++AHTP + A V L N P V TYH + E D V +
Sbjct: 46 VVHAHTP---FGLGLAAVR--LARRNDAPLVATYHTPTAEYAEYVGPDAVTGAVRRASER 100
Query: 143 LQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERYFPGKSYRLHSIYNLP 202
+R L +D ++TPS E + L + +P GVDT+R+ P + ++LP
Sbjct: 101 YERWFLSRADLVLTPSERTRREVRALG-VDTPVEAMPNGVDTDRFQPTDPTAFLAAHDLP 159
Query: 203 RSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMCMSLG 262
++ + G R K + LL A V D+ +V G G + + + G
Sbjct: 160 ADEPLIGYTG---RHGYEKRLGDLLAAAAGV-----DATVVFGGDGPARGDLEAEADARG 211
Query: 263 ISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNVGGIK 322
+ R F G+++ + +P FY + DV PS EG +V +EA A G PV G + G +
Sbjct: 212 VDAR--FLGFLDREEMPAFYSALDVFAFPSPIETEG--LVALEANACGTPVAGVDAGALS 267
Query: 323 HVIENGKTGILVPPKDPFRLAEAIVTLLTD-DNLA 356
I +G TG D AI L D D LA
Sbjct: 268 ETIIDGTTGYHYDAGDIPGFRRAIRRALDDRDTLA 302
>emb|CAC12195.1| (AL445066) N-acetylglucosaminyl-phosphatidylinositol biosynthetic
protein related protein [Thermoplasma acidophilum]
Length = 381
Score = 70.2 bits (169), Expect = 4e-11
Identities = 91/382 (23%), Positives = 163/382 (41%), Gaps = 41/382 (10%)
Query: 1 MKLLMITPYFYPEGGGLEKYAYMIARGLVERGWEVKVITASRKGNSLENLEGIEVIRLAP 60
M++L T +YP G+ Y + + L + G EV + + + G+S E+ + V +
Sbjct: 1 MRILYFTDTYYPTPDGVSVYLKEVKQKLEDEGHEVMIFSVT--GDSREH--NVYVPKYTA 56
Query: 61 HFIVS---NTPISFNLPLKLIKVFKEEQFSVINAHTPVPYYADVSAWVNNVLKGSNKTPF 117
F+ P+SF +P ++ + E +++ H Y + V V + P
Sbjct: 57 PFLPYPQYRVPVSF-IPFRVFRRALEFNPDIVHLHNAF-YMSSVGYLVARRIG----VPP 110
Query: 118 VLTYHNDL--VKEGFPLDKVAYLYNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKL 175
V T+H D+ +KE + ++L + L L + +P E L R K +
Sbjct: 111 VATFHTDVSRMKESINMPFKNLAFDLGERYSLFLYRKCRMVMAPSATVEEYLKIRGVKNV 170
Query: 176 IWIPPGVDTE--RYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYV 233
+ +P VDT+ RY P S + +Y + R KG+ +L +
Sbjct: 171 VTLPLFVDTDKYRYVPADSGERYILY--------------LGRITVDKGIYRVLDLAE-- 214
Query: 234 ATQVKDSYLVLVGRGDMIPEYKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPST 293
A + +D + G G + +++ G+ K V GYV++ + ++ + V PS+
Sbjct: 215 AMKSEDVRFKIAGVGPELDRIRRIVKYHGM-KNVEILGYVDDQRKMDLMANASLFVYPSS 273
Query: 294 TVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDD 353
+ FG+ + EA ASG PV+ + +K EN + V D E +L +D
Sbjct: 274 A--DTFGISVFEALASGVPVMVSEDFPVK---ENTEAISYVKFGDIRSAVETAERILHED 328
Query: 354 NLARKIGKTGRRLVEREYSWDK 375
RK+ R LVE +YS ++
Sbjct: 329 R--RKLAAEARHLVESKYSLER 348
>pir||B70610 hypothetical protein Rv1212c - Mycobacterium tuberculosis (strain
H37RV) >gi|1929086|emb|CAB07814.1| (Z93777) hypothetical
protein Rv1212c [Mycobacterium tuberculosis]
Length = 387
Score = 69.9 bits (168), Expect = 5e-11
Identities = 62/216 (28%), Positives = 104/216 (47%), Gaps = 25/216 (11%)
Query: 181 GVDTERYFPGKSYRLHSIY---NLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQV 237
G+DTE ++P R S+ + + + +F+G + R KGV +L+ A + V
Sbjct: 172 GIDTETWYPAGPARTGSVLAELGVDPNRPMAVFVGRITR---QKGVVHLVTAAHRFRSDV 228
Query: 238 KDSYLVLVGRGD---MIPEYKKMCMSLGISKRVIFTGYVEEDI----LPEFYRSSDVIVL 290
+ ++ G D + E + L ++ +F ++++ + L E ++ V V
Sbjct: 229 Q--LVLCAGAADTPEVADEVRVAVAELARNRTGVF--WIQDRLTIGQLREILSAATVFVC 284
Query: 291 PSTTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILV------PPKDPFRLAE 344
PS V E G+V +EA A V+ ++VGGI V+ +G TG LV RLAE
Sbjct: 285 PS--VYEPLGIVNLEAMACATAVVASDVGGIPEVVADGITGSLVHYDADDATGYQARLAE 342
Query: 345 AIVTLLTDDNLARKIGKTGRRLVEREYSWDKIVEKT 380
A+ L+ D A + G GR+ +E+SW I E+T
Sbjct: 343 AVNALVADPATAERYGHAGRQRCIQEFSWAYIAEQT 378
>emb|CAB43611.1| (AJ239004) galactosyl transferase [Streptococcus pneumoniae]
Length = 354
Score = 69.9 bits (168), Expect = 5e-11
Identities = 60/235 (25%), Positives = 109/235 (45%), Gaps = 17/235 (7%)
Query: 139 YNLSLQRGLLLLSDTIITPSPYCYYESKLLRRFKKKLIWIPPGVDTERYFPGKSYRLHSI 198
Y + R +L LSD +I S +Y+ K++ + GVDT Y K SI
Sbjct: 118 YKKNKVREMLELSDYVIVLSQ-TWYDFFSNININAKIVIVENGVDTSFYVEKKK----SI 172
Query: 199 YNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQVKDSYLVLVGRGDMIPEYKKMC 258
++ +F+G M + KG L+ A + +L + G G++ + ++
Sbjct: 173 -----TSNNFLFLGRMGK---RKGAYDLIDAMNQAVAINPNLHLTMAGDGEL-EDIRQKI 223
Query: 259 MSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPSTTVQEGFGMVLIEAGASGKPVIGTNV 318
+L ++ + +V + ++++ ++LPS EG M ++EA ASG +I T V
Sbjct: 224 SNLNLTDHITIYDWVNQRDKKILFQANQTLILPS--YNEGLPMAILEAMASGLAIISTPV 281
Query: 319 GGIKHVIENGKTGILVPPKDPFRLAEAIVTLLTDDNLARKIGKTGRRLVEREYSW 373
GGI +I G L+ P D +L+ I+ + ++ +G +LVE +YS+
Sbjct: 282 GGIPEIIHE-DNGWLIQPGDISQLSNIILEASYNPDVVSLMGSNNHKLVEEKYSF 335
>sp|Q11152|Y486_MYCTU HYPOTHETICAL 50.5 KDA PROTEIN RV0486 >gi|7476374|pir||A70744
probable hexosyltransferase (EC 2.4.1.-) Rv0486
[similarity] - Mycobacterium tuberculosis (strain H37RV)
>gi|1449284|emb|CAB00947.1| (Z77162) hypothetical
protein Rv0486 [Mycobacterium tuberculosis]
Length = 480
Score = 69.5 bits (167), Expect = 6e-11
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 178 IPPGVDTERYFPGKSYRLHSIYNLPRSAKIVMFIGTMNRGHAHKGVPYLLKAFKYVATQV 237
+ PGVD + + PG + LP ++V F+G R K +L+A A ++
Sbjct: 238 VHPGVDLDVFRPGDRRAARAALGLPVDERVVAFVG---RIQPLKAPDIVLRA----AAKL 290
Query: 238 KDSYLVLVG----RGDMIPE-YKKMCMSLGISKRVIFTGYVEEDILPEFYRSSDVIVLPS 292
+++ G G P+ ++ LGIS RV F L +R++D++ +PS
Sbjct: 291 PGVRIIVAGGPSGSGLASPDGLVRLADELGISARVTFLPPQSHTDLATLFRAADLVAVPS 350
Query: 293 TTVQEGFGMVLIEAGASGKPVIGTNVGGIKHVIENGKTGILVPPKDPFRLAEAIVTLL 350
+ E FG+V +EA A G PV+ VGG+ + +G TG LV + + A+AI LL
Sbjct: 351 YS--ESFGLVAVEAQACGTPVVAAAVGGLPVAVRDGITGTLVSGHEVGQWADAIDHLL 406
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.141 0.415
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 152215989
Number of Sequences: 2977
Number of extensions: 6721921
Number of successful extensions: 14677
Number of sequences better than 1.0e-10: 123
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 14476
Number of HSP's gapped (non-prelim): 137
length of query: 390
length of database: 189,106,746
effective HSP length: 54
effective length of query: 336
effective length of database: 156,788,448
effective search space: 52680918528
effective search space used: 52680918528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 166 (69.1 bits)