BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1015 1494669 1494968 100 !not a gene!
         (100 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||G71163 hypothetical protein PH0508 - Pyrococcus horikoshii ...    68  2e-11

>pir||G71163 hypothetical protein PH0508 - Pyrococcus horikoshii
          >gi|3256913|dbj|BAA29596.1| (AP000002) 136aa long
          hypothetical protein [Pyrococcus horikoshii]
          Length = 136
          
 Score = 68.3 bits (164), Expect = 2e-11
 Identities = 33/81 (40%), Positives = 54/81 (65%)

Query: 12 LPQDLPGIQTYALQSPPNELILFDIGNVLQERSKDKVKDPINLIEGIKRGEGILKNSLNV 71
          LPQ+L  IQT  LQ+P ++       N  Q+  K+++K+PINL++G+K  E ILK+ LN+
Sbjct: 4  LPQNLTRIQTNTLQTPLDQFFPLPRSNTPQKIPKNQIKNPINLMQGVKTSERILKDGLNI 63

Query: 72 FIVVVHQLIFIEAPDVLSLKE 92
           I++  QL  I+ P++L+ K+
Sbjct: 64 LIIIPPQLFPIKTPNILTPKQ 84


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.320    0.143    0.401 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35861038
Number of Sequences: 2977
Number of extensions: 1241830
Number of successful extensions: 2541
Number of sequences better than 1.0e-10: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2540
Number of HSP's gapped (non-prelim): 1
length of query: 100
length of database: 189,106,746
effective HSP length: 51
effective length of query: 49
effective length of database: 158,583,909
effective search space: 7770611541
effective search space used: 7770611541
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 159 (66.3 bits)