BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1041 (pgsA-like) DE:CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase (pgsA)
(186 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75005 cdp-diacylglycerol--glycerol-3-phosphate 3 -phosphat... 360 9e-99
sp|O58215|Y460_PYRHO HYPOTHETICAL PROTEIN PH0460 >gi|7450723|pir... 288 2e-77
sp|O67456|YE80_AQUAE HYPOTHETICAL PROTEIN AQ_1480 >gi|7450719|pi... 125 4e-28
pir||B69093 conserved hypothetical protein MTH1691 - Methanobact... 124 6e-28
gi|11499333 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphati... 114 8e-25
gb|AAK40873.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosph... 97 1e-19
emb|CAB57743.1| (Y18930) hypothetical protein [Sulfolobus solfat... 97 1e-19
emb|CAB70929.1| (AL137778) putative membrane transferase [Strept... 96 2e-19
emb|CAC11709.1| (AL445064) hypothetical protein [Thermoplasma ac... 91 9e-18
emb|CAB09618.1| (Z96801) hypothetical protein MLCL581.16c [Mycob... 90 1e-17
pir||C70571 probable pgs - Mycobacterium tuberculosis (strain H3... 89 3e-17
gb|AAG17336.1|AF265558_3 (AF265558) phosphatidylinositol synthas... 89 3e-17
pir||E71065 hypothetical protein PH1219 - Pyrococcus horikoshii ... 89 5e-17
pir||H70418 glucose-1-phosphate thymidylyltransferase - Aquifex ... 88 8e-17
gi|11499880 A. fulgidus predicted coding region AF2299 [Archaeog... 83 2e-15
pir||D75080 glucose-1-phosphate thymidylyltransferase related pr... 80 2e-14
pir||E72632 hypothetical protein APE1516 - Aeropyrum pernix (str... 79 3e-14
gi|11498743 CDP-diacylglycerol--glycerol-3-phosphate-3-phosphati... 79 4e-14
pir||G72633 probable CDP-diacylglycerol--glycerol-3-phosphatidyl... 78 9e-14
gi|11497879 A. fulgidus predicted coding region AF0263 [Archaeog... 77 2e-13
pir||E70407 hypothetical protein aq_1244 - Aquifex aeolicus >gi|... 76 3e-13
gb|AAG19441.1| (AE005037) CDP-diacylglycerol-glycerol-3-phosphat... 76 3e-13
emb|CAB61865.1| (AL133252) putative transmembrane protein [Strep... 69 3e-11
>pir||D75005 cdp-diacylglycerol--glycerol-3-phosphate 3 -phosphatidyltransferase
(pgsa) PAB1041 - Pyrococcus abyssi (strain Orsay)
>gi|5458996|emb|CAB50482.1| (AJ248288)
CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase (pgsA) [Pyrococcus abyssi]
Length = 186
Score = 360 bits (913), Expect = 9e-99
Identities = 186/186 (100%), Positives = 186/186 (100%)
Query: 1 MLSKLRPAVKEPLERTASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIG 60
MLSKLRPAVKEPLERTASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIG
Sbjct: 1 MLSKLRPAVKEPLERTASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIG 60
Query: 61 SLLDALDGALARATGKVSRFGGFLDSTLDRLSDGALLVGIALGNLIDWRVAFLALIGSYM 120
SLLDALDGALARATGKVSRFGGFLDSTLDRLSDGALLVGIALGNLIDWRVAFLALIGSYM
Sbjct: 61 SLLDALDGALARATGKVSRFGGFLDSTLDRLSDGALLVGIALGNLIDWRVAFLALIGSYM 120
Query: 121 VSYARCRAELAGSGTLAVGIAERGERLIIIMIFSLINRVWIGVYLVAVLSWVTFIQRVYE 180
VSYARCRAELAGSGTLAVGIAERGERLIIIMIFSLINRVWIGVYLVAVLSWVTFIQRVYE
Sbjct: 121 VSYARCRAELAGSGTLAVGIAERGERLIIIMIFSLINRVWIGVYLVAVLSWVTFIQRVYE 180
Query: 181 ARKRLQ 186
ARKRLQ
Sbjct: 181 ARKRLQ 186
>sp|O58215|Y460_PYRHO HYPOTHETICAL PROTEIN PH0460 >gi|7450723|pir||E71157 hypothetical
protein PH0460 - Pyrococcus horikoshii
>gi|3256863|dbj|BAA29546.1| (AP000002) 188aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 188
Score = 288 bits (730), Expect = 2e-77
Identities = 140/186 (75%), Positives = 165/186 (88%)
Query: 1 MLSKLRPAVKEPLERTASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIG 60
MLSK+RP VK+PLER LA +G+TPNQ+T++GFL+TL+ASYEFYL NQI+AG I+A+G
Sbjct: 1 MLSKIRPKVKQPLERIGKTLASLGITPNQLTIIGFLITLLASYEFYLQNQILAGIILAVG 60
Query: 61 SLLDALDGALARATGKVSRFGGFLDSTLDRLSDGALLVGIALGNLIDWRVAFLALIGSYM 120
+ LDALDGALARATGKVS+FGGFLDST+DRLSD ++L GIALG L+ W V FL LIGSYM
Sbjct: 61 AFLDALDGALARATGKVSKFGGFLDSTIDRLSDASILFGIALGGLVRWDVTFLTLIGSYM 120
Query: 121 VSYARCRAELAGSGTLAVGIAERGERLIIIMIFSLINRVWIGVYLVAVLSWVTFIQRVYE 180
VSY+RCRAELAGSGTLA+GIAERGER+III I SL N V IGVYLVA+LSW+TFIQRVYE
Sbjct: 121 VSYSRCRAELAGSGTLAIGIAERGERIIIIFIASLFNAVKIGVYLVAILSWITFIQRVYE 180
Query: 181 ARKRLQ 186
A+KRL+
Sbjct: 181 AKKRLE 186
>sp|O67456|YE80_AQUAE HYPOTHETICAL PROTEIN AQ_1480 >gi|7450719|pir||F70428 hypothetical
protein aq_1480 - Aquifex aeolicus
>gi|2983870|gb|AAC07423.1| (AE000742) putative protein
[Aquifex aeolicus]
Length = 196
Score = 125 bits (310), Expect = 4e-28
Identities = 71/188 (37%), Positives = 111/188 (58%), Gaps = 6/188 (3%)
Query: 4 KLRPAVKEPLERTASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIGSLL 63
+L+P +E LE ++ K ++PN +TL G L + S+ YL N I+A ++ +G+L
Sbjct: 7 RLKPYYEELLEPLVNFFGKYNVSPNLITLFGLFLVGLGSFFLYLENLILAFLLLLLGALA 66
Query: 64 DALDGALARATGKVSRFGGFLDSTLDRLSDGALLVGIAL-----GNLIDWRVAFLALIGS 118
D++DGALAR + FG FLDST+DR SD + + G+ ++FLALI S
Sbjct: 67 DSIDGALARRLNLKTEFGAFLDSTVDRFSDALPFTALGVHYASYGDETGVLLSFLALISS 126
Query: 119 YMVSYARCRAELAGSGTLAVGIAERGERLIIIMIFSLINRVWIGVYLVAVLSWVTFIQRV 178
+ VSY R RAE G L G+ ER ER I+++ L+ + +G++++ + S +T QRV
Sbjct: 127 FGVSYTRARAESLGVYGLG-GVFERTERWIVLLGSILLGLLKLGLFIITLGSLITVFQRV 185
Query: 179 YEARKRLQ 186
YE +K L+
Sbjct: 186 YETKKALE 193
>pir||B69093 conserved hypothetical protein MTH1691 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622821|gb|AAB86163.1| (AE000926) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 195
Score = 124 bits (309), Expect = 6e-28
Identities = 77/192 (40%), Positives = 108/192 (56%), Gaps = 10/192 (5%)
Query: 1 MLSKLRPAVKEPLERTASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIG 60
ML++ RP ++ ++ A +I L + +TL GFL+ AS + G+ I ++A
Sbjct: 8 MLNQFRPVIRRFIDPIAD---RIALPADYITLTGFLVACAASAGYASGSLITGAALLAAS 64
Query: 61 SLLDALDGALARATGKVSRFGGFLDSTLDRLSDGALLVGIALGNLIDWRVAFLALIGSYM 120
+D LDGA+AR + + FGGFLDSTLDRLSDG +++GI G LAL M
Sbjct: 65 GFIDVLDGAVARRRFRPTAFGGFLDSTLDRLSDGIIIIGITAGGFTGLLTGLLALHSGLM 124
Query: 121 VSYARCRAELAGSGTLAVGIAERGERLIIIMIFSLINRV---WI---GVYLVAVLSWVTF 174
VSY R RAE G AVGIAER ER+III+ SL + W + ++A L + T
Sbjct: 125 VSYVRARAESLGI-ECAVGIAERAERIIIILAGSLAGYLIHPWFMDAAIIVLAALGYFTM 183
Query: 175 IQRVYEARKRLQ 186
IQR+ +RL+
Sbjct: 184 IQRMIYVWQRLK 195
>gi|11499333 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
(pgsA-2) [Archaeoglobus fulgidus]
>gi|7450716|pir||G69467
CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase (pgsA-2) homolog -
Archaeoglobus fulgidus >gi|2648809|gb|AAB89506.1|
(AE000982) CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase (pgsA-2) [Archaeoglobus
fulgidus]
Length = 172
Score = 114 bits (282), Expect = 8e-25
Identities = 64/159 (40%), Positives = 94/159 (58%), Gaps = 2/159 (1%)
Query: 20 LAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIGSLLDALDGALARATGKVSR 79
L+K+G+ PN +TL G + LI+SY G + A + + SL D LDGALAR ++
Sbjct: 5 LSKLGVKPNHLTLAGLVFALISSYLIIEGRILHASIFVLLSSLCDLLDGALARKAELTTK 64
Query: 80 FGGFLDSTLDRLSDGALLVGIALGNLIDWRVAFLALIGSYMVSYARCRAELAGSGTLAVG 139
FGG+LDS DR D L + + + +DW +A+ G+ +VSY R RAE VG
Sbjct: 65 FGGYLDSVTDRYVDVILFISLGIYG-VDWVAIAMAMSGALLVSYTRARAETI-IEKCDVG 122
Query: 140 IAERGERLIIIMIFSLINRVWIGVYLVAVLSWVTFIQRV 178
IAER ERL+I+++ L ++ V ++AVLS +T + RV
Sbjct: 123 IAERSERLLILLLGMLTGYIYEAVLIIAVLSHITALHRV 161
>gb|AAK40873.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase,
putataive (pgsA) [Sulfolobus solfataricus]
Length = 195
Score = 97.1 bits (238), Expect = 1e-19
Identities = 61/185 (32%), Positives = 100/185 (53%), Gaps = 7/185 (3%)
Query: 1 MLSKLRPAVKEPLERTASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIG 60
ML+++R +K +E A LA++ ++ N +T+LG + ++ +E N + +
Sbjct: 4 MLTRIRRQIKRVIEPLAKTLAQLKVSANFITMLGLIFAIVYYFEIMRSNTTLGIIFLVFS 63
Query: 61 SLLDALDGALARATGKVSRFGGFLDSTLDRLSDGALLVGIALGNLIDWRVAFLALIGSYM 120
+L+DA+DG +AR + VS G FLDSTLDR+ D + + VA +A+ S
Sbjct: 64 ALMDAIDGEVARVSKTVSPLGSFLDSTLDRIEDILYISAFIFLGFSSYLVA-IAVGLSLT 122
Query: 121 VSYARCRAELAGSGTLAVGIAERGERLIIIMIFSLI-----NRVWIGV-YLVAVLSWVTF 174
+SY R +AE G GI ERGER+I + + L+ +V + + YL +L+ +T
Sbjct: 123 ISYIRAKAESLGLKMEGRGIIERGERIIFVFVILLLYIIVSKQVSLYLFYLFMLLTAITV 182
Query: 175 IQRVY 179
IQR Y
Sbjct: 183 IQRFY 187
>emb|CAB57743.1| (Y18930) hypothetical protein [Sulfolobus solfataricus]
Length = 195
Score = 97.1 bits (238), Expect = 1e-19
Identities = 61/185 (32%), Positives = 100/185 (53%), Gaps = 7/185 (3%)
Query: 1 MLSKLRPAVKEPLERTASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIG 60
ML+++R +K +E A LA++ ++ N +T+LG + ++ +E N + +
Sbjct: 4 MLTRIRRQIKRVIEPLAKTLAQLKVSANFITMLGLIFAIVYYFEIMRSNTTLGIIFLVFS 63
Query: 61 SLLDALDGALARATGKVSRFGGFLDSTLDRLSDGALLVGIALGNLIDWRVAFLALIGSYM 120
+L+DA+DG +AR + VS G FLDSTLDR+ D + + VA +A+ S
Sbjct: 64 ALMDAIDGEVARVSKTVSPLGSFLDSTLDRIEDILYISAFIFLGFSSYLVA-IAVGLSLT 122
Query: 121 VSYARCRAELAGSGTLAVGIAERGERLIIIMIFSLI-----NRVWIGV-YLVAVLSWVTF 174
+SY R +AE G GI ERGER+I + + L+ +V + + YL +L+ +T
Sbjct: 123 ISYIRAKAESLGLKMEGRGIIERGERIIFVFVILLLYIIVSKQVSLYLFYLFMLLTAITV 182
Query: 175 IQRVY 179
IQR Y
Sbjct: 183 IQRFY 187
>emb|CAB70929.1| (AL137778) putative membrane transferase [Streptomyces coelicolor
A3(2)]
Length = 241
Score = 96.3 bits (236), Expect = 2e-19
Identities = 62/186 (33%), Positives = 103/186 (55%), Gaps = 19/186 (10%)
Query: 17 ASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIM-AIGSLLDALDGALARATG 75
A++L + G++P+ VTLLG + + FY + GT++ + D +DG +AR G
Sbjct: 37 AAFLIRRGVSPDTVTLLGTAGVVAGALVFYPMGEFFWGTVVITLFVFSDLVDGNMARQLG 96
Query: 76 KVSRFGGFLDSTLDRLSDGALLVGIAL------GNLIDWRVAFLALIGSYMVSYARCRAE 129
+ SR+G FLDSTLDR++DGA+ G+AL +++ V+ L +VSY + R E
Sbjct: 97 RSSRWGAFLDSTLDRVADGAIFGGLALWYAGGGDDIVLCAVSIFCLASGQVVSYTKARGE 156
Query: 130 LAGSGTLAVGIAERGERLIIIMI---FSLINR---------VWIGVYLVAVLSWVTFIQR 177
G G+ ER ERL++ ++ F+ +++ + I +++VAV S VT +QR
Sbjct: 157 AIGLPVAVNGLVERAERLVVSLVAAGFAGLHKFGVPGIQYLLPIALWIVAVGSLVTLVQR 216
Query: 178 VYEARK 183
V R+
Sbjct: 217 VVTVRR 222
>emb|CAC11709.1| (AL445064) hypothetical protein [Thermoplasma acidophilum]
Length = 222
Score = 90.9 bits (222), Expect = 9e-18
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Query: 21 AKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIGSLLDALDGALARATGKVSRF 80
A IG +PN ++LL +L + +YLG V ++ +L DA+DG +AR G S+
Sbjct: 40 AFIGWSPNSISLLSLILAGLGGLSYYLGYPYVTLVMVVFSALFDAVDGKVARIKGSSSKL 99
Query: 81 GGFLDSTLDRLSDGALLVGIALGNLIDWRVAFLALIGSYMVSYARCRAELAGSGTLAVGI 140
G F+D + DR +D L++G A + + ALIG M SY +A+ G L GI
Sbjct: 100 GDFIDHSFDRFADIFLILGFAFSRFGNIYLGVFALIGVLMTSYLGTQAQALGLNRLYAGI 159
Query: 141 AERGERLIIIMIFSLINRVWIGVY 164
R +RL +IMI +I ++++G +
Sbjct: 160 MGRADRL-VIMIVLIIVQIFVGTF 182
>emb|CAB09618.1| (Z96801) hypothetical protein MLCL581.16c [Mycobacterium leprae]
Length = 239
Score = 90.5 bits (221), Expect = 1e-17
Identities = 61/186 (32%), Positives = 101/186 (53%), Gaps = 29/186 (15%)
Query: 16 TASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMA-IGSLLDALDGALARAT 74
TA L ++GLTP+ +T+LG ++ + + ++ AGT++ L D LDGA+AR
Sbjct: 19 TARALLRVGLTPDAITVLGTIVAASGALVLFPIGKLFAGTLVVWFFVLFDMLDGAMARER 78
Query: 75 GKVSRFGGFLDSTLDRLSDGALLVGIALGNLIDWRVAF------------LALIGSYMVS 122
G +R+G LD+T DR+SDGA+ G+ W +AF + L+ S ++S
Sbjct: 79 GGGTRYGAVLDATCDRISDGAVFCGLL------WWMAFGLHSKHLVVATLICLVTSQVIS 132
Query: 123 YARCRAELAGSGTLAVGIAERGERLIIIMI------FSLINRVW---IGVYLVAVLSWVT 173
Y + RAE +G G+ ER ERLII+++ F + + W + ++L+ V S +T
Sbjct: 133 YIKARAEASGLRG-DDGLIERPERLIIVLVGAGLSDFPVYSLPWALSVAMWLLVVASLIT 191
Query: 174 FIQRVY 179
QR++
Sbjct: 192 CAQRLH 197
>pir||C70571 probable pgs - Mycobacterium tuberculosis (strain H37RV)
>gi|2104301|emb|CAB08630.1| (Z95387) pgsA [Mycobacterium
tuberculosis]
Length = 217
Score = 89.3 bits (218), Expect = 3e-17
Identities = 62/185 (33%), Positives = 100/185 (53%), Gaps = 35/185 (18%)
Query: 20 LAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGT-IMAIGSLLDALDGALARATGKVS 78
L ++GLTP+ VT+LG ++ + + ++ AG ++ L D LDGA+AR G +
Sbjct: 23 LLRVGLTPDVVTILGTTASVAGALTLFPMGKLFAGACVVWFFVLFDMLDGAMARERGGGT 82
Query: 79 RFGGFLDSTLDRLSDGALLVGIALGNLIDWRVAF------------LALIGSYMVSYARC 126
RFG LD+T DR+SDGA+ G+ W +AF + L+ S ++SY +
Sbjct: 83 RFGAVLDATCDRISDGAVFCGLL------WWIAFHMRDRPLVIATLICLVTSQVISYIKA 136
Query: 127 RAE---LAGSGTLAVGIAERGERLIIIMIFSLIN---------RVWIGVYLVAVLSWVTF 174
RAE L G G G ER ERLII++ + ++ + +G++L+AV S +T
Sbjct: 137 RAEASGLRGDG----GFIERPERLIIVLTGAGVSDFPFVPWPPALSVGMWLLAVASVITC 192
Query: 175 IQRVY 179
+QR++
Sbjct: 193 VQRLH 197
>gb|AAG17336.1|AF265558_3 (AF265558) phosphatidylinositol synthase [Mycobacterium smegmatis]
Length = 222
Score = 89.3 bits (218), Expect = 3e-17
Identities = 66/186 (35%), Positives = 96/186 (51%), Gaps = 35/186 (18%)
Query: 22 KIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIM-AIGSLLDALDGALARATGKVSRF 80
+ GLTP+ VTL G +I + + Q+ G ++ + L D LDGA+AR G +RF
Sbjct: 25 RAGLTPDIVTLAGTAAAVIGALTLFPIGQLWWGAVVVSFFVLADMLDGAMAREQGGGTRF 84
Query: 81 GGFLDSTLDRLSDGALLVGIALGNLIDWRVAF------------LALIGSYMVSYARCRA 128
G LD+T DRL DGA+ G+ W AF + L+ S ++SY + RA
Sbjct: 85 GAVLDATCDRLGDGAVFAGLT------WWAAFGLDSPSLVVATLICLVTSQVISYIKARA 138
Query: 129 E---LAGSGTLAVGIAERGERLIIIMI---------FSLINRVWIGVYLVAVLSWVTFIQ 176
E L G G GI ER ERL+I++I F L + + ++++AV S VT +Q
Sbjct: 139 EASGLRGDG----GIIERPERLVIVLIGAGLSDLPFFPLPWTLHVAMWVLAVASVVTLLQ 194
Query: 177 RVYEAR 182
RV+ R
Sbjct: 195 RVHAVR 200
>pir||E71065 hypothetical protein PH1219 - Pyrococcus horikoshii
>gi|3257636|dbj|BAA30319.1| (AP000005) 423aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 423
Score = 88.5 bits (216), Expect = 5e-17
Identities = 62/171 (36%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 25 LTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIGSLLDALDGALARATGKVSRFGGFL 84
+TPNQ+TL+ F +I++ ++ N +AG + I S+LD +DG +ARA + S+FGG+
Sbjct: 250 VTPNQMTLITFTFGIISALVNFV-NIPLAGILYQISSILDGVDGEIARARMQTSKFGGYF 308
Query: 85 DSTLDRLSDGALLVGIALGNLID---WRVAFLALIGSYMVSY-------ARCRAELAGSG 134
DS LDR D + L+ +A +L D W VA LA+ S MVSY A C
Sbjct: 309 DSILDRYVDLSFLLTLAYVSLADPLWWSVATLAIFSSAMVSYSTERFRGAYCADAYKVIP 368
Query: 135 TLAVGIAERGERLIIIMIFSLINRVWIGVYLVAVLSWVTFIQRVYEARKRL 185
L +R ER+ IMIF+L+ + L+A+ S + I +Y R L
Sbjct: 369 ALRKIPGKRDERIFTIMIFTLLGWIKALFILLAIWSTLRVIITIYLVRTTL 419
>pir||H70418 glucose-1-phosphate thymidylyltransferase - Aquifex aeolicus
>gi|2983786|gb|AAC07344.1| (AE000737)
glucose-1-phosphate thymidylyltransferase [Aquifex
aeolicus]
Length = 428
Score = 87.8 bits (214), Expect = 8e-17
Identities = 58/169 (34%), Positives = 91/169 (53%), Gaps = 11/169 (6%)
Query: 26 TPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIGSLLDALDGALARATGKVSRFGGFLD 85
TPNQ+T+L FLL + ++ Y + + G ++ I S+LD LDG +ARA + ++FG +LD
Sbjct: 257 TPNQLTVLTFLLGMFSALVAYF-SPALGGILLQINSMLDGLDGEVARAQMRTTKFGAWLD 315
Query: 86 STLDRLSDGALLVGIALGNLIDWRV---AFLALIGSYMVSY-------ARCRAELAGSGT 135
S LDR D A L +A+ W F AL GS MVSY A C A
Sbjct: 316 SVLDRYVDFAFLSALAMHLKPSWDFMPWVFAALFGSVMVSYSTERYKGAYCEDAYAVIKE 375
Query: 136 LAVGIAERGERLIIIMIFSLINRVWIGVYLVAVLSWVTFIQRVYEARKR 184
L + +R ER+ +IMIF+++ + ++A+++ + I +Y K+
Sbjct: 376 LRYLLGKRDERIFMIMIFTILGWIKALFVVLAIITNLRVILTIYLVWKK 424
>gi|11499880 A. fulgidus predicted coding region AF2299 [Archaeoglobus fulgidus]
>gi|7483801|pir||C69537 hypothetical protein AF2299 -
Archaeoglobus fulgidus >gi|2648223|gb|AAB88959.1|
(AE000945) A. fulgidus predicted coding region AF2299
[Archaeoglobus fulgidus]
Length = 344
Score = 83.1 bits (202), Expect = 2e-15
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 11/179 (6%)
Query: 15 RTASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQI---VAGTIMAIGSLLDALDGALA 71
R + LA +TPNQ+T+ F L+L+ S F L + + +AG I+ + S++D DG +A
Sbjct: 162 RISRLLADTSVTPNQITVFSFFLSLVGSALFLLNSYLTTLLAGVIIQLHSIIDGCDGEIA 221
Query: 72 RATGKVSRFGGFLDSTLDRLSDGALLVGI----ALGNLIDWRVAFLALIGSYMVSYARCR 127
R S++G +LD LDR SD ++ I + N + W + FLA S M++Y +
Sbjct: 222 RLKFMESKYGAWLDGVLDRYSDFIIVFSITYVLSASNPVYWIIGFLAAFASLMIAYTGDK 281
Query: 128 AELAGSGTLA-VGIA---ERGERLIIIMIFSLINRVWIGVYLVAVLSWVTFIQRVYEAR 182
A T + G A R RL+II S++N + + ++A+L ++R+ R
Sbjct: 282 FVAAYMRTYSPEGFAIPITRDFRLLIIFACSVVNLPSLALVIIALLGNFEALRRIVALR 340
>pir||D75080 glucose-1-phosphate thymidylyltransferase related protein PAB2433 -
Pyrococcus abyssi (strain Orsay)
>gi|5458457|emb|CAB49945.1| (AJ248286)
GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE related
protein [Pyrococcus abyssi]
Length = 424
Score = 80.0 bits (194), Expect = 2e-14
Identities = 55/172 (31%), Positives = 89/172 (50%), Gaps = 15/172 (8%)
Query: 25 LTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIGSLLDALDGALARATGKVSRFGGFL 84
+TPNQ+T++ FL + ++ ++ I AG + + S+LD +DG +ARA + S+FGG+
Sbjct: 250 VTPNQMTIVTFLFGIFSALMNFISVPI-AGILYQVSSILDGVDGEIARARMQTSKFGGYF 308
Query: 85 DSTLDRLSDGALLVGIALGNLID---WRVAFLALIGSYMVSY-------ARCRAELAGSG 134
DS LDR D L+ +A ++ + W +A +A+ S MVSY A C
Sbjct: 309 DSILDRYVDFTFLLILAYVSIREPLWWAIAAIAMFSSAMVSYSTERFKGAYCVDAYKVIP 368
Query: 135 TLAVGIAERGERLIIIMIFSLINRVWIGVYLVAVLSWVTF--IQRVYEARKR 184
L +R ER+ + M+ +L+ WI + + W TF I VY + R
Sbjct: 369 ALRKVPGKRDERIFLTMLLTLVG--WIKALFLILAIWSTFRVIVTVYLVKTR 418
>pir||E72632 hypothetical protein APE1516 - Aeropyrum pernix (strain K1)
>gi|5105201|dbj|BAA80515.1| (AP000061) 223aa long
hypothetical protein [Aeropyrum pernix]
Length = 223
Score = 79.2 bits (192), Expect = 3e-14
Identities = 56/158 (35%), Positives = 81/158 (50%), Gaps = 12/158 (7%)
Query: 25 LTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIGSLLDALDGALARATGKVSRFGGFL 84
LTPN ++L+ FL A+ G +V G ++ + S+LD +DG +AR S+ GGFL
Sbjct: 46 LTPNMLSLISFLTAAAAALFIAGGQLLVGGLLVQLSSVLDGVDGIVARRLRAASKAGGFL 105
Query: 85 DSTLDRLSDGALLVGIALG-----NLIDWRV--AFLALIGSYMVSYARCRAEL-AGSGTL 136
D+ LDR +D + + +A L W V A LA+ G MVSY R E AG
Sbjct: 106 DTMLDRYADTVIYLALAYAAVATHGLETWAVLTAVLAVSGDIMVSYLHTRGERDAGVHPS 165
Query: 137 AVG----IAERGERLIIIMIFSLINRVWIGVYLVAVLS 170
VG +A R RL+I+ + + R + VA+LS
Sbjct: 166 LVGPLDSLASRDVRLLIVAVITAAGRPLEAMAAVALLS 203
>gi|11498743 CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase
(pgsA-1) [Archaeoglobus fulgidus]
>gi|7450718|pir||F69392
CDP-diacylglycerol--glycerol-3-phosphate-3-
phosphatidyltrans ferase (pgsA-1) homolog -
Archaeoglobus fulgidus >gi|2649447|gb|AAB90103.1|
(AE001025)
CDP-diacylglycerol--glycerol-3-phosphate-3-
phosphatidyltransferase (pgsA-1) [Archaeoglobus
fulgidus]
Length = 141
Score = 78.8 bits (191), Expect = 4e-14
Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 59 IGSLLDALDGALARATGKVSRFGGFLDSTLDRLSDGALLVGIA-LGNLIDWRVAFLALIG 117
I +LD DG LAR TG+V+R G +LD DR D A+++GI L W F+A++G
Sbjct: 6 ISQILDCTDGDLARLTGRVTRSGAYLDRVFDRFVDAAIVIGIVYLYPSELWLAGFMAVVG 65
Query: 118 SYMVSYARCRAELAGSGTLAVGIAERGERLIIIMI-----FSLINRVWI---GVYLVAVL 169
S+ VS R AE G+ VGI R RL IIM+ ++ N V + +++VAVL
Sbjct: 66 SFGVSITRAMAEAEGA-ECKVGIGGRDTRLAIIMVGLLYGYASGNAVSVYAATLWIVAVL 124
Query: 170 SWVTFIQRVYEARKRL 185
++T + R+ K+L
Sbjct: 125 GFITTLHRMLHTLKQL 140
>pir||G72633 probable CDP-diacylglycerol--glycerol-3-phosphatidyltransferase
APE1526 - Aeropyrum pernix (strain K1)
>gi|5105211|dbj|BAA80525.1| (AP000061) 141aa long
hypothetical
CDP-diacylglycerol--glycerol-3-phosphatidyltransferase
[Aeropyrum pernix]
Length = 141
Score = 77.6 bits (188), Expect = 9e-14
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Query: 56 IMAIGSLLDALDGALARATGKVSRFGGFLDSTLDRLSDGALLVGIALGNLIDWRVAFLAL 115
++A+ LLDA+DGA+AR TG+VS G FLDS+LDR+SD + + + + L
Sbjct: 6 LIALSLLLDAVDGAVARFTGRVSPLGSFLDSSLDRISDSLYHATLYIAG-VHPLIVIAML 64
Query: 116 IGSYMVSYARCRAELAGSGTLAVGIAERGERLIIIMIFSLINRVWIGVYL-----VAVLS 170
G +V Y R + E G G+ ERGER I I+ I+ + L AVL
Sbjct: 65 SGGLIVPYLRAKGESLGLEVRGRGLMERGERSIAILAILAISIYNLQTALALASAAAVLV 124
Query: 171 WVTFIQRV 178
W+T IQR+
Sbjct: 125 WITVIQRM 132
>gi|11497879 A. fulgidus predicted coding region AF0263 [Archaeoglobus fulgidus]
>gi|7429846|pir||G69282 hypothetical protein AF0263 -
Archaeoglobus fulgidus >gi|2650378|gb|AAB90972.1|
(AE001087) A. fulgidus predicted coding region AF0263
[Archaeoglobus fulgidus]
Length = 490
Score = 76.9 bits (186), Expect = 2e-13
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 14/157 (8%)
Query: 25 LTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIGSLLDALDGALARATGKVSRFGGFL 84
+ PNQ+TL+ FL+ ++ + + AG + S+LD DG +ARA+ K+S+ GG++
Sbjct: 319 VNPNQMTLISFLVGAFSALASFFSIPL-AGLLYQFSSILDGCDGEIARASLKMSKKGGYV 377
Query: 85 DSTLDRLSDGALLVGIALGNLIDWRVAFLALIGSYMVSYA--RCRAELAGS-----GTLA 137
DS LDR D L IAL VA A+ GS MVSY + +AE S L
Sbjct: 378 DSILDRFVDFLFLAIIALLYPKTATVAMFAIFGSVMVSYTSEKYKAEFGESIFGKFRVLN 437
Query: 138 VGIAERGERLIIIMIFSLINRV------WIGVYLVAV 168
+R ER+ +IMIF L++ + W+ +++ A+
Sbjct: 438 YIPGKRDERIFLIMIFCLLSAISLQWIFWMFLFVAAI 474
>pir||E70407 hypothetical protein aq_1244 - Aquifex aeolicus
>gi|2983686|gb|AAC07251.1| (AE000730) putative protein
[Aquifex aeolicus]
Length = 207
Score = 76.1 bits (184), Expect = 3e-13
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 2 LSKLRPAVKEPLERTASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGT-IMAIG 60
L+ R ++K+ LA+ G PN +TL+ L I++Y FY ++ ++G ++A+
Sbjct: 3 LTSKRESLKKLYYPLGESLARTGFPPNFITLISLFLGSISAY-FYFHHKTLSGAFLLALS 61
Query: 61 SLLDALDGALARATGKVSRFGGFLDSTLDRLSDGALL--VGIALGNLIDWRVAF-LALIG 117
L D LDG +AR TGK ++FG D D+ DG +L +G A + VA L+++
Sbjct: 62 GLFDLLDGVVARTTGKTTKFGAVFDWIADKWVDGLVLGAIGFAYASPFVAIVAITLSMLH 121
Query: 118 SYM--VSYARCRAELAGSGTL-----AVGIAERGERLIIIMIFSLINR------VWIGVY 164
S++ V+YA G + VG R E I I++FS++ R + G+
Sbjct: 122 SFIKPVAYAEIGYTERKKGKIVDPLEGVGFFGRPETHITIILFSILERSPIPVGLGFGIK 181
Query: 165 LVAVLSWVTFIQRVYEARKR 184
LVA+L+ + + R+ K+
Sbjct: 182 LVALLTLASLLMRIIYLYKK 201
>gb|AAG19441.1| (AE005037) CDP-diacylglycerol-glycerol-3-phosphate
3-phosphatidyltransferase; PgsA [Halobacterium sp.
NRC-1]
Length = 199
Score = 75.7 bits (183), Expect = 3e-13
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 2 LSKLRPAVKEPLERTASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQI---VAGTIMA 58
L + RP L+ +G TPN V++ F L ++A+ FY+G V +
Sbjct: 3 LDQFRPLANRLLDPWVRAAKTVGATPNTVSVAAFGLAVVAAAAFYVGTPAAYAVGAVCVF 62
Query: 59 IGSLLDALDGALARATGKVSRFGGFLDSTLDRLSDGALLVGIALGNLIDWRVAFLALIGS 118
LD LDGALAR G S G LD LDR +D ++ G A G + + + A+ G
Sbjct: 63 FNGWLDLLDGALAREVGTASEAGDLLDHVLDRYADVVVVTGAAAG-VDAFGLGLAAVTGV 121
Query: 119 YMVSYARCRAELAGSGTLAVGIAERGERLIIIMIFSLINRVWIGV----------YLVAV 168
+ SY +A+ G + G+ R +RL ++ + + + + V + AV
Sbjct: 122 LLTSYLGTQAQAVGLDRVYGGLLGRADRLALVGVTAGVAAITPTVAGYSPVVALLVVFAV 181
Query: 169 LSWVTFIQRVYEARKRL 185
+ +T IQR A ++L
Sbjct: 182 VGHLTAIQRFVSAWRQL 198
>emb|CAB61865.1| (AL133252) putative transmembrane protein [Streptomyces coelicolor
A3(2)]
Length = 205
Score = 69.1 bits (166), Expect = 3e-11
Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 22/187 (11%)
Query: 4 KLRPAVKEPLERTASYLAKIGLTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIGSLL 63
+ R A+ PL+R A+ L + +TPN++T LG L L ++ G A + + L
Sbjct: 5 RARAALSGPLDRAAAMLDRPAVTPNRLTALGLLTGLASAGSAAAGWWPAAAALWLLSRLA 64
Query: 64 DALDGALA--RATGKVSRFGGFLDSTLDRLSDGALLVGIALG----------NLIDWRV- 110
D LDG LA R T S GGFLD + D L GA +VG+A+G L+ + V
Sbjct: 65 DGLDGPLARRRGTANSSGAGGFLDISADFLVYGAFVVGVAVGVGGPALPFLLVLLTYYVN 124
Query: 111 --AFLALIGSYMVSYARCRAELAGSGTLAV--GIAERGERLIIIMIFSLI-----NRVWI 161
AFLA + R L+G +L G+AE GE + + ++ L+ W+
Sbjct: 125 GTAFLAFSSIAERTGRRGDGRLSGGRSLNFLGGLAEGGETIAVHTLWCLLPGFAHTIAWV 184
Query: 162 GVYLVAV 168
+VAV
Sbjct: 185 WAAVVAV 191
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.327 0.143 0.408
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60187182
Number of Sequences: 2977
Number of extensions: 2203034
Number of successful extensions: 8422
Number of sequences better than 1.0e-10: 23
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 8379
Number of HSP's gapped (non-prelim): 23
length of query: 186
length of database: 189,106,746
effective HSP length: 53
effective length of query: 133
effective length of database: 157,386,935
effective search space: 20932462355
effective search space used: 20932462355
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.7 bits)
S2: 162 (67.5 bits)