BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1092 (PAB1092) DE:Hypothetical protein
(303 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75016 hypothetical protein PAB1092 - Pyrococcus abyssi (st... 630 e-180
pir||F71455 hypothetical protein PH0300 - Pyrococcus horikoshii ... 577 e-164
sp|Q58873|YE78_METJA HYPOTHETICAL PROTEIN MJ1478 >gi|2128886|pir... 350 1e-95
pir||E70415 conserved hypothetical protein aq_1333 - Aquifex aeo... 284 7e-76
pir||E72407 conserved hypothetical protein - Thermotoga maritima... 262 4e-69
gi|11498919 conserved hypothetical protein [Archaeoglobus fulgid... 229 3e-59
pir||H71048 hypothetical protein PH1680 - Pyrococcus horikoshii ... 227 1e-58
pir||H75166 hypothetical protein PAB2029 - Pyrococcus abyssi (st... 225 6e-58
pir||A72514 hypothetical protein APE2086 - Aeropyrum pernix (str... 211 8e-54
sp|Q58558|YB57_METJA HYPOTHETICAL PROTEIN MJ1157 >gi|2128701|pir... 187 2e-46
gi|11499188 conserved hypothetical protein [Archaeoglobus fulgid... 176 4e-43
pir||A69100 conserved hypothetical protein MTH1742 - Methanobact... 173 3e-42
emb|CAC12246.1| (AL445066) conserved hypothetical protein [Therm... 163 2e-39
emb|CAB57713.1| (Y18930) hypothetical protein [Sulfolobus solfat... 138 6e-32
gb|AAG18803.1| (AE004984) Vng0190c [Halobacterium sp. NRC-1] 138 6e-32
gb|AAK40900.1| Conserved hypothetical protein [Sulfolobus solfat... 138 6e-32
gb|AAF58991.1| (AE003834) CG8078 gene product [Drosophila melano... 137 2e-31
pir||T33145 hypothetical protein F29C4.6 - Caenorhabditis elegan... 133 2e-30
pir||B69025 conserved hypothetical protein MTH1186 - Methanobact... 132 6e-30
sp|P53088|YGW1_YEAST HYPOTHETICAL 35.5 KD PROTEIN IN VAM7-YPT32 ... 122 7e-27
pir||T02383 hypothetical protein F4I1.8 - Arabidopsis thaliana >... 118 1e-25
pir||T40160 conserved hypothetical protein SPBC2G5.03 - fission ... 116 2e-25
pir||H72637 hypothetical protein APE0537 - Aeropyrum pernix (str... 115 9e-25
sp|Q94480|V136_DICDI VEG136 PROTEIN >gi|1513300|gb|AAB06790.1| (... 109 5e-23
gb|AAF17646.1|AC009978_22 (AC009978) T23E18.11 [Arabidopsis thal... 82 9e-15
sp|Q57909|Y485_METJA HYPOTHETICAL PROTEIN MJ0485 >gi|2128338|pir... 76 6e-13
gi|6321227 Ygl211wp [Saccharomyces cerevisiae] >gi|1322852|emb|C... 73 6e-12
>pir||D75016 hypothetical protein PAB1092 - Pyrococcus abyssi (strain Orsay)
>gi|5459084|emb|CAB50570.1| (AJ248288) hypothetical
protein [Pyrococcus abyssi]
Length = 303
Score = 630 bits (1607), Expect = e-180
Identities = 303/303 (100%), Positives = 303/303 (100%)
Query: 1 MKCKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDS 60
MKCKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDS
Sbjct: 1 MKCKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDS 60
Query: 61 AVTAYVLNKLGYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYGIGE 120
AVTAYVLNKLGYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYGIGE
Sbjct: 61 AVTAYVLNKLGYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYGIGE 120
Query: 121 VKTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEYIAKGG 180
VKTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEYIAKGG
Sbjct: 121 VKTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEYIAKGG 180
Query: 181 PLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDMKAVLNELEE 240
PLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDMKAVLNELEE
Sbjct: 181 PLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDMKAVLNELEE 240
Query: 241 KRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFCRFWGLKEEIKFKV 300
KRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFCRFWGLKEEIKFKV
Sbjct: 241 KRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFCRFWGLKEEIKFKV 300
Query: 301 KVR 303
KVR
Sbjct: 301 KVR 303
>pir||F71455 hypothetical protein PH0300 - Pyrococcus horikoshii
>gi|3256690|dbj|BAA29373.1| (AP000001) 310aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 310
Score = 577 bits (1472), Expect = e-164
Identities = 270/300 (90%), Positives = 288/300 (96%)
Query: 1 MKCKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDS 60
MKCKFCSREAYIK+HYPKMYLCEEHFKEYFERKV RTIE+YKLL KDE+ILVAVSGGKDS
Sbjct: 1 MKCKFCSREAYIKIHYPKMYLCEEHFKEYFERKVSRTIERYKLLTKDERILVAVSGGKDS 60
Query: 61 AVTAYVLNKLGYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYGIGE 120
AVTAYVL KLGYNIECLHINLGI YS+KSEEYAKKQC+LIGAPLHIVRIKEILGYGIGE
Sbjct: 61 AVTAYVLKKLGYNIECLHINLGISGYSEKSEEYAKKQCKLIGAPLHIVRIKEILGYGIGE 120
Query: 121 VKTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEYIAKGG 180
VKTRRP CSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNN+L+WNTEY+AKGG
Sbjct: 121 VKTRRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNILHWNTEYLAKGG 180
Query: 181 PLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDMKAVLNELEE 240
P+LP +GKF+KKVKPLYE+TEREVVAYALAVGLEYIVEECPYARGATTLDMK VLNELEE
Sbjct: 181 PILPQQGKFIKKVKPLYEVTEREVVAYALAVGLEYIVEECPYARGATTLDMKGVLNELEE 240
Query: 241 KRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFCRFWGLKEEIKFKV 300
KRPGTK+NFVRGY+KKKKLFE EI+ KE+KECKIC MPSSGDICAFC+FWGLK+EI FKV
Sbjct: 241 KRPGTKFNFVRGYLKKKKLFEPEIKEKEIKECKICRMPSSGDICAFCKFWGLKKEINFKV 300
>sp|Q58873|YE78_METJA HYPOTHETICAL PROTEIN MJ1478 >gi|2128886|pir||E64484 hypothetical
protein MJ1478 - Methanococcus jannaschii
>gi|1592117|gb|AAB99482.1| (U67588) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 303
Score = 350 bits (889), Expect = 1e-95
Identities = 164/297 (55%), Positives = 215/297 (72%), Gaps = 2/297 (0%)
Query: 1 MKCKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDS 60
MKCKFC +++YIKL PKMYLC+EHF EYFE KV+++I+KYK+L KDEKILVAVSGGKD
Sbjct: 5 MKCKFCDKKSYIKLKSPKMYLCKEHFVEYFENKVKKSIDKYKMLSKDEKILVAVSGGKDG 64
Query: 61 AVTAYVLNKLGYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYGIGE 120
A+VL KLGYNIE HINLGI +S++S + K+ E + PLH+V +K+I G + +
Sbjct: 65 HAAAWVLKKLGYNIELFHINLGIEGFSEESLKAVKELAEKLEVPLHVVNLKDITGKTMED 124
Query: 121 VKTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEYIAKGG 180
++ ++ CS CG TKRY+MNKF Y+NGFD I TGHNLDDE SF+LNNL WN Y+AK
Sbjct: 125 IRGKK--CSICGTTKRYLMNKFGYENGFDVIVTGHNLDDEVSFILNNLFNWNIRYLAKHE 182
Query: 181 PLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDMKAVLNELEE 240
P+LPA KF+KKVK +E+ E ++ YA A + Y EC YA A TL +A LNELE+
Sbjct: 183 PVLPAHDKFLKKVKIFFEIEEELILKYAEAEEIPYTTVECKYAERAITLKHRAYLNELEK 242
Query: 241 KRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFCRFWGLKEEIK 297
+RPG KY F+ GY+K + LF+ E + +EC++CGM S+G IC+FCR W L ++ K
Sbjct: 243 ERPGIKYQFLSGYMKNRHLFKVEEEDFQFRECEVCGMTSAGKICSFCRVWKLYKKKK 299
>pir||E70415 conserved hypothetical protein aq_1333 - Aquifex aeolicus
>gi|2983761|gb|AAC07321.1| (AE000735) hypothetical
protein [Aquifex aeolicus]
Length = 301
Score = 284 bits (720), Expect = 7e-76
Identities = 144/299 (48%), Positives = 201/299 (67%), Gaps = 7/299 (2%)
Query: 2 KCKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSA 61
KC+ C ++A I + + ++ LC EHF E+FE+ +RTI+++K+ K +K+LVA+SGGKDS
Sbjct: 3 KCRICGKKAIIYMPHHRLALCREHFVEWFEKYTERTIKEFKMFTKKDKVLVAISGGKDSL 62
Query: 62 VTAYVLNKLGYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYGIGEV 121
+VL KLGY + L+INLGIGEYS+KS+E K E I IV +KE L GI E+
Sbjct: 63 ALWHVLRKLGYEADGLYINLGIGEYSEKSKEKVLKFAEKINGKAIIVDLKEELA-GIPEL 121
Query: 122 K--TRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEYIAKG 179
T R CS CGL KRY NK A ++G++ IATGHNLDDEAS LL N+L WN +Y+ +
Sbjct: 122 VKITSREACSVCGLVKRYNFNKVAKEHGYNVIATGHNLDDEASALLANVLNWNEKYLGRK 181
Query: 180 GPLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDMKAVLNELE 239
P+L E FV+KVKP + TE+E YAL G+++I EECP++ AT++ K +LNE+E
Sbjct: 182 YPVLEEEAGFVRKVKPFCKFTEKETALYALLNGIDFIEEECPFSEDATSVFYKKILNEIE 241
Query: 240 EKRPGTKYNFVRGYVKK-KKLFESEIRRKELKECKICGMPSSGDICAFCRFWGLKEEIK 297
E+ PGTK F Y++K F E +KEL+ CK+CG P+ G+IC CR L+E+++
Sbjct: 242 ERSPGTKLRFYLDYLRKIYPKFRKEEEKKELQPCKVCGEPTVGEICPVCR---LREKVE 297
>pir||E72407 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4980693|gb|AAD35289.1|AE001704_10 (AE001704)
conserved hypothetical protein [Thermotoga maritima]
Length = 304
Score = 262 bits (662), Expect = 4e-69
Identities = 130/304 (42%), Positives = 191/304 (62%), Gaps = 8/304 (2%)
Query: 1 MKCKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDS 60
MKC C + A +KL + + LC+EHF E+ E++V++ I+K+K+ ++ KIL+AVSGGKDS
Sbjct: 1 MKCTKCGKPASVKLRHYNIKLCKEHFNEFIEQRVEKAIKKFKMFGRNSKILIAVSGGKDS 60
Query: 61 AVTAYVLNKLGYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYGIG- 119
++L KLGY ++ L I G +K++E +K EL+ LHIV E G G+
Sbjct: 61 VSLWHMLKKLGYEVDALFIRAGKSGMVQKAQEIVEKNAELLNTKLHIVDATEYFG-GLST 119
Query: 120 ---EVKTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEYI 176
+ RRP CS CG+ +RY+MNKFAY+NG+D + TGHNL+DEAS LL N+L+W Y+
Sbjct: 120 QEISIMLRRPVCSICGVVRRYLMNKFAYENGYDVVVTGHNLNDEASVLLGNILHWQEGYL 179
Query: 177 AKGGPLLP-AEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDMKAVL 235
+ PLLP K V K KPL E ++ YA + ++ CP++ GAT+L K +L
Sbjct: 180 ERQWPLLPKTHEKLVPKAKPLVLNYEEDIKLYATLNEIPHLEMACPFSVGATSLVYKKIL 239
Query: 236 NELEEKRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFCRFWGLKEE 295
ELEE++PG NF G++K+KK E + + L+ECK CG P++ ++C+FCR E+
Sbjct: 240 RELEEEQPGITLNFYLGFLKRKK--EPKFEVEGLRECKECGYPTTAEVCSFCRLRKQVEK 297
Query: 296 IKFK 299
K K
Sbjct: 298 RKNK 301
>gi|11498919 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7429996|pir||H69414 conserved hypothetical protein
AF1321 - Archaeoglobus fulgidus
>gi|2649255|gb|AAB89924.1| (AE001012) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 287
Score = 229 bits (578), Expect = 3e-59
Identities = 119/291 (40%), Positives = 184/291 (62%), Gaps = 13/291 (4%)
Query: 1 MKCKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDS 60
MKCK C R+A L + LCE+ + E++ V+R+I+++++L+ +E++L+A+SGGKDS
Sbjct: 1 MKCKKCGRKAVANLKAYGIALCEKCYPEFYRNLVKRSIKRFRILRPEERVLIAISGGKDS 60
Query: 61 AVTAYVLNKLGYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYGIGE 120
+ A VL +L Y+ E L+I+LGIG YS++SE ++ + L++VR+++ G+ + +
Sbjct: 61 SALAAVLKELDYDAELLYIDLGIGNYSEESERVVRELSSSLDLSLNVVRLRD-YGFTVDD 119
Query: 121 V--KTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEYIAK 178
V K RR TCS CG KRYIMN+FA +N FD +ATGH +D ASF + N+ + K
Sbjct: 120 VARKMRRKTCSACGTAKRYIMNRFARENSFDVVATGHTAEDIASFYIKNVAGGTRVWAEK 179
Query: 179 GGPL-LPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDMKAVLNE 237
P P + K V + KPL+E++E+E + Y L + + + ECP+A + K ++ +
Sbjct: 180 LMPRNEPFDEKIVTRAKPLFEVSEKENMLYVLVNDIPHTLMECPHAPNP---EWKEIVYD 236
Query: 238 LEEKRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFCR 288
+E ++PG NFVRG V+ + FE E K CKICG SSGD+CAFCR
Sbjct: 237 IERRKPGFVKNFVRGLVRPAEEFE------ETKYCKICGEVSSGDVCAFCR 281
>pir||H71048 hypothetical protein PH1680 - Pyrococcus horikoshii
>gi|3258109|dbj|BAA30792.1| (AP000006) 320aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 320
Score = 227 bits (573), Expect = 1e-58
Identities = 128/303 (42%), Positives = 174/303 (57%), Gaps = 15/303 (4%)
Query: 1 MKCKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDS 60
MKC C REA Y Y C +HF E E KV+RTI KY+++KK E+I VAVSGGKDS
Sbjct: 1 MKCSKCGREAVYFAKYEGKYYCHKHFNEMVESKVKRTIRKYRMIKKGERIGVAVSGGKDS 60
Query: 61 AVTAYVLNKL----GYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGY 116
V ++L KL + I + I+ GI Y KS + AKK EL+G HI R K+ +G+
Sbjct: 61 VVLLHLLAKLRKKFPFEIVAITIDEGIKGYRDKSIKVAKKNAELLGVEHHIYRFKDYIGF 120
Query: 117 GIGEV-------KTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLL 169
+ E R CSYCG+ +R+++NK A + D +A G NLDDE L NL+
Sbjct: 121 TLDETVEIMGARGERLGACSYCGVWRRWLLNKAAEELKVDKLALGLNLDDEVQMFLMNLM 180
Query: 170 YWNTEYIAKGGPLLPA--EGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGAT 227
+ + + GP EG V ++KPL E+ E+E+V YA+ +E + ECPYA A
Sbjct: 181 RGDVARLGRTGPYYEVIHEG-LVPRIKPLREVPEKEIVLYAVLNNIEVDLSECPYAVEAF 239
Query: 228 TLDMKAVLNELEEKRPGTKYNFVRGYVKKKKLFESEIRRK-ELKECKICGMPSSGDICAF 286
+++ LNE+EEK PGTKY +R Y K L +K +L CKICG P+SG+IC
Sbjct: 240 RAEIRDWLNEMEEKHPGTKYQLLRSYDKIFPLLAKTYAKKVKLNRCKICGQPTSGEICKA 299
Query: 287 CRF 289
C+F
Sbjct: 300 CQF 302
>pir||H75166 hypothetical protein PAB2029 - Pyrococcus abyssi (strain Orsay)
>gi|5457925|emb|CAB49415.1| (AJ248284) hypothetical
protein [Pyrococcus abyssi]
Length = 323
Score = 225 bits (567), Expect = 6e-58
Identities = 126/303 (41%), Positives = 175/303 (57%), Gaps = 15/303 (4%)
Query: 1 MKCKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDS 60
MKC C REA Y Y C +HF E E KV+RTI KY+++KK E+I VAVSGGKDS
Sbjct: 1 MKCSKCGREAVYFAKYEGKYYCHKHFNEMVESKVKRTIRKYRMIKKGERIGVAVSGGKDS 60
Query: 61 AVTAYVLNKL----GYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGY 116
V ++L KL + I + I+ GI Y KS E AK+ EL+G HI R K+ +G+
Sbjct: 61 VVLLHLLAKLRKRFPFEIVAITIDEGIKGYRDKSVEVAKRNAELLGVEHHIYRFKDYIGF 120
Query: 117 GIGEV-------KTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLL 169
+ E R CSYCG+ +R+++NK A + D +A G NLDDE L NL+
Sbjct: 121 TLDETVEIMGARGERLGACSYCGVWRRWLLNKAAEELKVDKLALGLNLDDEVQVFLMNLM 180
Query: 170 YWNTEYIAKGGPLLPA--EGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGAT 227
+ + + GP EG V ++KPL E+ E+E+V YA+ +E + ECPYA A
Sbjct: 181 RGDVARLGRTGPYYEVIHEG-LVPRIKPLREVPEKEIVLYAVLNNIEVDLSECPYAVEAF 239
Query: 228 TLDMKAVLNELEEKRPGTKYNFVRGYVKKKKLF-ESEIRRKELKECKICGMPSSGDICAF 286
+++ LNE+EE+ PGTKY +R Y K L ++ + +L CKICG P+SG+IC
Sbjct: 240 RAEIRDWLNEMEERHPGTKYQLLRSYDKIFPLLAKTYAKEVKLNRCKICGQPTSGEICKA 299
Query: 287 CRF 289
C+F
Sbjct: 300 CQF 302
>pir||A72514 hypothetical protein APE2086 - Aeropyrum pernix (strain K1)
>gi|5105785|dbj|BAA81097.1| (AP000063) 331aa long
hypothetical protein [Aeropyrum pernix]
Length = 331
Score = 211 bits (532), Expect = 8e-54
Identities = 113/295 (38%), Positives = 176/295 (59%), Gaps = 10/295 (3%)
Query: 2 KCKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSA 61
+C C A + Y + YLC +H+ E+ E KV+R I +++L+ K +++L AVSGGKDS+
Sbjct: 3 RCSVCGAPAVAYIRYQRRYLCRDHYLEFVESKVERAIMRHRLVGKGDRVLAAVSGGKDSS 62
Query: 62 VTAYVLNKL----GYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYG 117
VL++L G+++ L+I+LGI EYS+KS E + + + PL + + E+LG G
Sbjct: 63 TLLAVLSRLSRRIGFHVVALYIHLGIYEYSEKSREASIRLASQLDVPLIVFDLNEVLGAG 122
Query: 118 IGEV--KTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEY 175
I E+ ++RP CS CG+ KRY++N A + G DA+A GHN DD A + L + L + E
Sbjct: 123 IPELAKASKRPPCSVCGMVKRYVINAAAVELGVDAVALGHNADDIAVYNLKSFLNQDLEA 182
Query: 176 IAKGGPLLPA-EGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYA-RGATTLDMKA 233
I+K G + G V +V+PLY + E+E Y+L GL ++ EECP+ R +++K
Sbjct: 183 ISKLGVKTESIPGVAVGRVRPLYYVYEKESFLYSLLAGLPFLHEECPFVERRQMEVELKE 242
Query: 234 VLNELEEKRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFCR 288
+N+LE+KRPG K V K+ + + + + C CG+ SSG C+FCR
Sbjct: 243 TVNQLEDKRPGLKLQMVSKLAKRVEDYPKP--KGSIGRCPSCGLLSSGGECSFCR 295
>sp|Q58558|YB57_METJA HYPOTHETICAL PROTEIN MJ1157 >gi|2128701|pir||E64444 hypothetical
protein MJ1157 - Methanococcus jannaschii
>gi|1592323|gb|AAB99161.1| (U67558) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 341
Score = 187 bits (469), Expect = 2e-46
Identities = 106/305 (34%), Positives = 168/305 (54%), Gaps = 18/305 (5%)
Query: 6 CSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSAVTAY 65
C EA+ Y +LC+E FK+ ER+ ++ + K +++ + KI + +SGGKDS V AY
Sbjct: 42 CGNEAFYYQKYSNRHLCKECFKKDIERRAKKVLGK-DIIRNNVKIGIGISGGKDSLVMAY 100
Query: 66 VLNKLGYNIE-----CLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYGIGE 120
+L +L +I C ++ GI + +E+Y K+ C+ L I++ ++ +GY + E
Sbjct: 101 ILKELFKHIPNAKLICFFVDEGIKGFRNIAEKYVKEFCKEYNLDLKIIKFEDEIGYTLDE 160
Query: 121 VKTRR--------PTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWN 172
+ CS+CG+ +RY++NK A G D +A GHNLDD +L N + N
Sbjct: 161 IVKNDYLSKLNIGKPCSFCGVVRRYLLNKHALKEGCDYLAIGHNLDDFCQTILMNYVEGN 220
Query: 173 TEYIAKGGPLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDMK 232
+ I + G G FVK++KPL + E EV YA ++Y E CPY+ + MK
Sbjct: 221 IKNIIQFGKEFEGGG-FVKRIKPLKLIPEEEVKLYAEINNIKYQREPCPYSSLSYRHRMK 279
Query: 233 AVLNELEEKRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFCRFWGL 292
V+ LEE++PG K++ +RGY K K ++E++ C+ICG P SG+IC C +
Sbjct: 280 KVIEILEEEKPGVKFSILRGYEKLLKYLNV---KEEIRRCEICGFPCSGNICKVCSWLIK 336
Query: 293 KEEIK 297
+EIK
Sbjct: 337 LKEIK 341
>gi|11499188 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7429997|pir||B69449 conserved hypothetical protein
AF1595 - Archaeoglobus fulgidus
>gi|2648962|gb|AAB89651.1| (AE000992) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 304
Score = 176 bits (441), Expect = 4e-43
Identities = 103/302 (34%), Positives = 164/302 (54%), Gaps = 11/302 (3%)
Query: 3 CKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSAV 62
C CSR A I + +LC+ HF E FER+V+ ++KY +++K ++I +A+SGGKDS
Sbjct: 4 CSKCSRRAVIFQRHANRHLCKRHFIEDFERRVKLAVKKYDMIQKGDRIAIALSGGKDSVT 63
Query: 63 TAYVLNKL-GYNIE----CLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYG 117
A+VLNKL G+ + + I+ GI Y + E A+K E +G +V +E G
Sbjct: 64 LAFVLNKLYGFRSDLEFFAITIDEGIAGYRPPTVEIARKVTEQLGMEHLVVSFEENFGMT 123
Query: 118 IGEVKTR--RPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEY 175
+ E+ R + C+YCG+ ++Y++N+ A + G +ATGHNLDDE +L N L + E
Sbjct: 124 LDEMVKRGDKKPCTYCGVFRKYLLNRTAREMGATKLATGHNLDDETQTILLNFLNADMER 183
Query: 176 IAKGGPLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDMKAVL 235
+A+ P EG V ++KP + E+EVV Y L +ECPY+ ++ L
Sbjct: 184 MARLVPQRVQEG-LVVRIKPFRYVYEKEVVVYGFLHELPMDFDECPYSHFPVRAAVRDFL 242
Query: 236 NELEEKRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFCRFWGLKEE 295
+ E K PG K++ + + K + + +L C+ CG P+ IC C+ L EE
Sbjct: 243 YDFENKYPGRKFSVMSSFEKLIPCLKEIYPQIDLNRCERCGEPTPRRICQACK---LLEE 299
Query: 296 IK 297
++
Sbjct: 300 LR 301
>pir||A69100 conserved hypothetical protein MTH1742 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622874|gb|AAB86212.1| (AE000930) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 270
Score = 173 bits (433), Expect = 3e-42
Identities = 98/267 (36%), Positives = 152/267 (56%), Gaps = 18/267 (6%)
Query: 36 RTIEKYKLLKKDEKILVAVSGGKDSAVTAYVLNKLG----YNIECLHINLGIGEYSKKSE 91
R I KYKL+++ +++LV +SGGKDS + +L++L +E + I+ GIG Y +
Sbjct: 2 RDIRKYKLIERGDRVLVGLSGGKDSVMVIDILDELRERNIIELEAVTIDEGIGGYREDGV 61
Query: 92 EYAKKQCELIGAPLHIVRIKEILGYGIGEVKTR--RPTCSYCGLTKRYIMNKFAYDNGFD 149
A+K C G P +V +++ G + E+ R C+YCG+ +R+I+N+ A +
Sbjct: 62 RIARKICADRGIPHRVVSLEDYAGITLDEIMKNPSRSACTYCGVFRRWILNREARKSKAT 121
Query: 150 AIATGHNLDDEASFLLNNLLYWNTEYIAKGGPLLP-AEGKFVKKVKPLYELTEREVVAYA 208
IATGHNLDDE ++ N L N E + + GP+ A G+F+ K+KPL E+ E+EV Y
Sbjct: 122 KIATGHNLDDETQAIVMNYLEGNLENLTRIGPMTSSAGGRFIPKIKPLREIPEKEVALYV 181
Query: 209 LAVGLEYIVEECPYARGATTLDMKAVLNELEEKRPGTKYNFVRGYVKKKKLFESEIRRKE 268
LA GL+ + CPYA G+ ++ L ++ KRP Y+ +RG+ + K EI R++
Sbjct: 182 LARGLDVHLAGCPYASGSFRREIGDFLKQISVKRPTIMYSTLRGFDRIK-----EILRRD 236
Query: 269 LKE------CKICGMPSSGDICAFCRF 289
L E C CG P+SG +C C F
Sbjct: 237 LSESGRSGICVKCGEPASGKLCKACTF 263
>emb|CAC12246.1| (AL445066) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 314
Score = 163 bits (409), Expect = 2e-39
Identities = 96/298 (32%), Positives = 155/298 (51%), Gaps = 15/298 (5%)
Query: 1 MKCKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDE-KILVAVSGGKD 59
MKC C EA Y +YLC EHF + E++V+ I LKK +I VA+SGGKD
Sbjct: 1 MKCSKCQAEAIYFAKYNGLYLCREHFNDMIEKRVKSEIRNQVDLKKPMVRISVAISGGKD 60
Query: 60 SAVTAYVLNKL-----GYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEIL 114
S+VT Y+L+K+ + ++ GI Y E A K +++G I+R ++
Sbjct: 61 SSVTLYLLHKILSKRRNVELTAFTVDEGISGYRPAGLESAIKLTKMLGVDHSIIRFQDSF 120
Query: 115 GYGIGEV---KTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYW 171
G + + R CSYCG +R ++N+ A D +A G NLDD + +L N+
Sbjct: 121 GMTLDSIVGADASRIPCSYCGPLRRKLINEMAERQNADYVALGLNLDDYSQSILMNVAKG 180
Query: 172 NTEYIAKGGPLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDM 231
+ + + + P A+ V+++ PL + E+EVV YA+ G+ + CPY A
Sbjct: 181 DYDRLLRMSPQKEAKDGLVRRIAPLRSVLEKEVVLYAVINGIPFDSSWCPYYSRAQRNIF 240
Query: 232 KAVLNELEEKRPGTKYNFVRGYVKKKKLFESEIRR--KELKECKICGMPSSGDICAFC 287
+ V+N L E P TK++ ++ + + + S+++R K L C+ICG P+ D+C+ C
Sbjct: 241 REVVNTLSEYNPSTKFSILKFFERAR----SDVQRNDKALGRCRICGAPTENDVCSAC 294
>emb|CAB57713.1| (Y18930) hypothetical protein [Sulfolobus solfataricus]
Length = 323
Score = 138 bits (345), Expect = 6e-32
Identities = 105/308 (34%), Positives = 151/308 (48%), Gaps = 26/308 (8%)
Query: 1 MKCKFC-SREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKD 59
M C C +REA I + LC+E F E ++V+ K +++ + KIL+AVSGGKD
Sbjct: 1 MICDNCKTREAVILQPHTGRKLCKECFIEDIRKRVEMEARKQEIVNSN-KILLAVSGGKD 59
Query: 60 SAVTAYVLNKLGYNIECLHINLGIG-------EYSKKSEEYAKKQCELIGAPLHIVRIKE 112
S V A L++ + + N+ G EY KK EEY K +G L KE
Sbjct: 60 SLVLADTLSQFIHPSRLIAFNINEGIKGYNRNEYVKKLEEYLKD----LGIELIKSGFKE 115
Query: 113 ILGYGIGEV-------KTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLL 165
+G+ + E+ K C++CG +R ++N+ D +ATGHNLDDE ++
Sbjct: 116 EVGFSLDEMLEASLKKKLNVSACTFCGGFRRKLINEAGIKVAADYVATGHNLDDEVQTIV 175
Query: 166 NNLLYWN-TEYIAKGGPLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYAR 224
NL+ + I G L KFV +VKPL ++ E E YA G E+ ECPY
Sbjct: 176 INLIRGDLLRLIRFGDKPLMVSSKFVMRVKPLRKIYEWETTMYAHLKGFEFQETECPYIS 235
Query: 225 GATTLDMKA--VLNELEEKRPGTKYNFVRGYVKKKKLFESEIR-RKELKECKICGMPSSG 281
TL K +L +LEEK+PGT + + + + + E R EL C ICG P++
Sbjct: 236 QKPTLRAKVRDLLYKLEEKKPGTLLRILEQFDEISEKIKKEYRLTNELPNCVICGEPTTP 295
Query: 282 D--ICAFC 287
IC C
Sbjct: 296 GRMICKNC 303
>gb|AAG18803.1| (AE004984) Vng0190c [Halobacterium sp. NRC-1]
Length = 320
Score = 138 bits (345), Expect = 6e-32
Identities = 99/317 (31%), Positives = 152/317 (47%), Gaps = 36/317 (11%)
Query: 1 MKCKFCSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKD------EKILVAV 54
M C C R+A + Y +LCE HF + ER+V+R I +L D E ++ +
Sbjct: 1 MDCTKCDRDAVMHAAYSGAHLCEPHFLDSVERRVRRRIRTDNMLSPDTTPDDPETWVIGL 60
Query: 55 SGGKDSAVTAYVLNKL-----GYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHI-- 107
SGGKDSAV ++ + + L I+ GI Y +S + C + A I
Sbjct: 61 SGGKDSAVLTDLIEETFRDDPRVELIALTIHEGIAGYRDESLD----ACTTLAADRDIRH 116
Query: 108 --VRIKEILGYGIGEVKTRRPT----CSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEA 161
V +E + +V P C+YCG+ +R ++ K+A + D + TGHNLDDEA
Sbjct: 117 ELVTYREEFDVAMDDVADDDPLDMAPCAYCGVFRRDLLAKYADEYDADKLLTGHNLDDEA 176
Query: 162 SFLLNNLLYWNTEYIAKGGPLLPAEGKF---------VKKVKPLYELTEREVVAYALAVG 212
L N+L N IA + G F + + KPL ++ E+EV YA
Sbjct: 177 ETALMNILEGNVTQIATHFDA--SLGSFDDRAELDAMIPRAKPLRDIPEKEVALYAQLRD 234
Query: 213 LEYIVEECPYARGATTLDMKAVLNELEEKRPGTKYNFVRGYVKKKKLFESEIRR--KELK 270
L + ECP+A + D++ VL ELE++RPGT+++ + GY + + E ++
Sbjct: 235 LPVHMAECPHASESFRSDLQEVLLELEDRRPGTRHSIMAGYEELAGIAADEYNTDDADVG 294
Query: 271 ECKICGMPSSGDICAFC 287
EC CG P++ D C C
Sbjct: 295 ECSDCGAPTTRDRCRKC 311
>gb|AAK40900.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 323
Score = 138 bits (345), Expect = 6e-32
Identities = 105/308 (34%), Positives = 151/308 (48%), Gaps = 26/308 (8%)
Query: 1 MKCKFC-SREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKD 59
M C C +REA I + LC+E F E ++V+ K +++ + KIL+AVSGGKD
Sbjct: 1 MICDNCKTREAVILQPHTGRKLCKECFIEDIRKRVEMEARKQEIVNSN-KILLAVSGGKD 59
Query: 60 SAVTAYVLNKLGYNIECLHINLGIG-------EYSKKSEEYAKKQCELIGAPLHIVRIKE 112
S V A L++ + + N+ G EY KK EEY K +G L KE
Sbjct: 60 SLVLADTLSQFIHPSRLIAFNINEGIKGYNRNEYVKKLEEYLKD----LGIELIKSGFKE 115
Query: 113 ILGYGIGEV-------KTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLL 165
+G+ + E+ K C++CG +R ++N+ D +ATGHNLDDE ++
Sbjct: 116 EVGFSLDEMLEASLKKKLNVSACTFCGGFRRKLINEAGIKVAADYVATGHNLDDEVQTIV 175
Query: 166 NNLLYWN-TEYIAKGGPLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYAR 224
NL+ + I G L KFV +VKPL ++ E E YA G E+ ECPY
Sbjct: 176 INLIRGDLLRLIRFGDKPLMVSSKFVMRVKPLRKIYEWETTMYAHLKGFEFQETECPYIS 235
Query: 225 GATTLDMKA--VLNELEEKRPGTKYNFVRGYVKKKKLFESEIR-RKELKECKICGMPSSG 281
TL K +L +LEEK+PGT + + + + + E R EL C ICG P++
Sbjct: 236 QKPTLRAKVRDLLYKLEEKKPGTLLRILEQFDEISEKIKKEYRLTNELPNCVICGEPTTP 295
Query: 282 D--ICAFC 287
IC C
Sbjct: 296 GRMICKNC 303
>gb|AAF58991.1| (AE003834) CG8078 gene product [Drosophila melanogaster]
Length = 343
Score = 137 bits (341), Expect = 2e-31
Identities = 94/292 (32%), Positives = 143/292 (48%), Gaps = 12/292 (4%)
Query: 6 CSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSAVTAY 65
C A +K LC+E F FE ++ TI L ++ EK+ VA SGGKDS V A+
Sbjct: 9 CGNRAALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTVLAH 68
Query: 66 VLNKL------GYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYGIG 119
VL L G + L I+ GI Y S E K+ + PL I+ +E+ G+ +
Sbjct: 69 VLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMD 128
Query: 120 EVKT---RRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEYI 176
+ R C++CG+ +R +++ A G D+IATGHN DD A +L N+L +T +
Sbjct: 129 RIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARL 188
Query: 177 AKGGPLLPAEGK-FVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDMKAVL 235
+ + G+ + +VKPL E+E+V YA L Y EC +A A +A L
Sbjct: 189 RRCTSIRTGGGEDTIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFL 248
Query: 236 NELEEKRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFC 287
+LE+ RP + + Y ++ F+ +++ E C CG SS C C
Sbjct: 249 KDLEKVRPSVIMDII--YSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKAC 298
>pir||T33145 hypothetical protein F29C4.6 - Caenorhabditis elegans
>gi|3193157|gb|AAC19193.1| (AF067616) contains
similarity to S. cerevisiae YGL211w (GB:Z72733)
[Caenorhabditis elegans]
Length = 373
Score = 133 bits (332), Expect = 2e-30
Identities = 87/291 (29%), Positives = 139/291 (46%), Gaps = 11/291 (3%)
Query: 6 CSREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSAVTAY 65
CS A I+ LC F FE V I KL K+ E++ + SGGKDS V AY
Sbjct: 16 CSNPAKIRKAKDGAQLCGPCFSRNFEDDVHEAIVNNKLFKRGERVAIGASGGKDSTVLAY 75
Query: 66 VLNKL------GYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYGIG 119
V+ L G +++ L I+ GI Y S +K G PL I+ +++ G+ +
Sbjct: 76 VMKTLNDRHDYGLDLQLLSIDEGIKGYRDDSLLAVEKNRVEYGLPLTILSYRDLYGWTMD 135
Query: 120 EVKTR---RPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEYI 176
++ + + C++CG+ +R +++ A+ G + TGHN DD A LL N+L + +
Sbjct: 136 DIVAKIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAETLLMNVLRGDIARL 195
Query: 177 AKGGPLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDMKAVLN 236
+ ++ E + + KPL ER++V YA LEY EC YA A + +
Sbjct: 196 ERCTNIVTGEEGDLPRAKPLKYCFERDIVMYARTNQLEYFYTECIYAPNAYRGYARKYVR 255
Query: 237 ELEEKRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFC 287
+LE+ P + +R +K + E+ LK C+ CG +S +C C
Sbjct: 256 DLEKVHPRAILDLIRS--GEKVSVKKEVEMPTLKICERCGYMTSQKLCKAC 304
>pir||B69025 conserved hypothetical protein MTH1186 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622294|gb|AAB85675.1| (AE000887) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 278
Score = 132 bits (328), Expect = 6e-30
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 9/272 (3%)
Query: 24 EHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSAVTAYVLNKL----GYNIECLHI 79
+ F +++ IE ++L+K E I VA+SGGKDS +T + L+ L + + + +
Sbjct: 4 QEFNHRIMGRIRGLIEGHELIKPGEHIAVALSGGKDSVLTLHALSDLRSDLDFELTAITV 63
Query: 80 NLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYGIGEVKTRRPT-CSYCGLTKRYI 138
+ GIG Y + A++ EL+G L ++ + + V R + C CG+ +R+I
Sbjct: 64 DEGIGGYRSEGVMVARENAELLGVELIERSFRDEFNFELDSVTDRFSSPCIPCGVFRRWI 123
Query: 139 MNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEYIAKGGP-LLPAEGKFVKKVKPLY 197
+N+ A + G IATGHN+DDE + +L + +K GP L V ++KPL+
Sbjct: 124 LNRTAREIGASKIATGHNMDDEIQSFIMSLARGDVRKFSKFGPELQRIHPAMVPRIKPLW 183
Query: 198 ELTEREVVAYALAVGLEYIVEECPYARGATTLDMKAVLNELEEKRPGTKYNFVRGYVKKK 257
E EV +A+ ++ ++ CPY+ + ++ LN LE ++ G K +R
Sbjct: 184 STPESEVRLWAVLNDVKVHLDSCPYSDLSMRSRIRDFLNHLESEKQGVK---LRVMESLS 240
Query: 258 KLFESEIRRKELKECKICGMPSSGDICAFCRF 289
+ F + L+EC CG PSSGD C C F
Sbjct: 241 RTFLPLSETEGLRECLRCGEPSSGDKCKACEF 272
>sp|P53088|YGW1_YEAST HYPOTHETICAL 35.5 KD PROTEIN IN VAM7-YPT32 INTERGENIC REGION
>gi|2131296|pir||S71668 hypothetical protein 1 - yeast
(Saccharomyces cerevisiae) >gi|7445411|pir||S64230
hypothetical protein YGL211w - yeast (Saccharomyces
cerevisiae) >gi|1655726|gb|AAC49498.1| (U33754) unknown
[Saccharomyces cerevisiae]
Length = 317
Score = 122 bits (302), Expect = 7e-27
Identities = 87/295 (29%), Positives = 139/295 (46%), Gaps = 17/295 (5%)
Query: 3 CKFC-SREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSA 61
C+ C SR+A I+ LC++ F FE ++ TI L ++ EK+ V SGGKDS
Sbjct: 22 CELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVANNLFQRGEKVAVGASGGKDST 81
Query: 62 VTAYVLNKL------GYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILG 115
V A++L L G I L I+ GI Y S K+ + G PL I K++
Sbjct: 82 VLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYD 141
Query: 116 YGIGEVKT---RRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWN 172
+ + E+ + R +C+YCG+ +R +++ A G + TGHN DD A +L N+L +
Sbjct: 142 WTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGD 201
Query: 173 TEYIAKGGPLL-PAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDM 231
+ K ++ + G +K+ KP ++E+V YA + L+Y EC YA A
Sbjct: 202 VARLEKSTAIITQSSGSPIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTA 261
Query: 232 KAVLNELEEKRPGTKYNFVRG------YVKKKKLFESEIRRKELKECKICGMPSS 280
+ + LE RP + ++ KK + ++ + C CG SS
Sbjct: 262 REYMKNLEAVRPSCIIDIIQSGENLALKAKKSNAGKRVVKFVDGNRCARCGYLSS 316
>pir||T02383 hypothetical protein F4I1.8 - Arabidopsis thaliana
>gi|3128173|gb|AAC16077.1| (AC004521) hypothetical
protein [Arabidopsis thaliana]
Length = 358
Score = 118 bits (292), Expect = 1e-25
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 15/298 (5%)
Query: 3 CKFCS-REAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSA 61
C C+ R +K +C E F E FE ++ + I + +L K E++ + SGGKDS
Sbjct: 14 CCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGERVAIGASGGKDST 73
Query: 62 VTAYVLNKL------GYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILG 115
V AYVL++L G ++ L I+ GI Y S E K+ G PL IV K++ G
Sbjct: 74 VLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGLPLKIVSYKDLYG 133
Query: 116 YGIGEVKTR---RPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWN 172
+ + E+ + C++CG+ +R +++ A + + TGHN DD A +L N+L +
Sbjct: 134 WTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDIAETVLLNILRGD 193
Query: 173 TEYIAKGGPLLPAEGKFVKKVKPLYELTEREVVAYAL---AVGLEYIVEECPYARGATTL 229
+++ + E + + KP E+E+V Y A L+Y EC Y+ A
Sbjct: 194 IARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVIYPSLHNAFKLDYFSTECIYSPNAYRG 253
Query: 230 DMKAVLNELEEKRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFC 287
+ + +LE RP + ++ + + + E C+ CG SS C C
Sbjct: 254 FAREFIKDLERIRPRAILDIIKS--GEDFRIATTTKMPEQGTCERCGYISSQKWCKAC 309
>pir||T40160 conserved hypothetical protein SPBC2G5.03 - fission yeast
(Schizosaccharomyces pombe) >gi|3850068|emb|CAA21879.1|
(AL033385) hypothetical protein [Schizosaccharomyces
pombe]
Length = 335
Score = 116 bits (289), Expect = 2e-25
Identities = 83/298 (27%), Positives = 139/298 (45%), Gaps = 14/298 (4%)
Query: 3 CKFCSREAYIKLHYPK--MYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDS 60
C+ C+ E L PK +C+E F FE ++ I + KL + E++ + SGGKDS
Sbjct: 6 CQLCN-ERRPALVRPKTGQKICKECFYYVFETEIHNVIIENKLFVRGERVGIGASGGKDS 64
Query: 61 AVTAYVLNKL------GYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEIL 114
V AYV+ L G + + ++ GI Y S + K+ + G P+ IV ++
Sbjct: 65 TVLAYVMKLLNERYDYGLELYLISVDEGIRGYRDDSLDTVKRNQQQYGLPMKIVSYADLY 124
Query: 115 -GYGIGEVKTR---RPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLY 170
G+ + V R + C+YCG+ +R +++ A + TGHN DD A +L NLL
Sbjct: 125 DGWTMDNVVARIGTKNNCTYCGVFRRQALDRAALSLDIHHLVTGHNADDIAETILMNLLR 184
Query: 171 WNTEYIAKGGPL-LPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTL 229
+ + + + ++ K+ KP E+E+V YA L+Y EC Y+ A
Sbjct: 185 GDVARLPRSTEITTQSDSSPTKRSKPFKYSYEKEIVLYAHYKKLDYFSTECTYSPEAFRG 244
Query: 230 DMKAVLNELEEKRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFC 287
+A++ +LE RP + + + + + + + C+ CG SS IC C
Sbjct: 245 TARAMIKQLENIRPSSILDIIYSGESMQLASSVQEQLPQQTTCERCGFISSNRICKAC 302
>pir||H72637 hypothetical protein APE0537 - Aeropyrum pernix (strain K1)
>gi|5104189|dbj|BAA79504.1| (AP000060) 324aa long
hypothetical protein [Aeropyrum pernix]
Length = 324
Score = 115 bits (284), Expect = 9e-25
Identities = 82/294 (27%), Positives = 145/294 (48%), Gaps = 18/294 (6%)
Query: 21 LCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSAVTAYVLNKLGYNIECLHIN 80
LC E F+E +V+R +E++ ++ E +L+ +SGGKDS V L+++ + ++
Sbjct: 11 LCRECFREDIVGRVRREVERWGMIGPGETVLLGLSGGKDSYVLLDALSEIVGPSRLVAVS 70
Query: 81 L--GIGEYSKKSE-EYAKKQCELIGAPLHIVRIKEILGYGIGEVKTR-------RPTCSY 130
+ GI Y+++ + E ++ G + + I+E +G + E+ +R C+Y
Sbjct: 71 IVEGIPGYNREGDIEKIRRVAAARGVDVIVTSIREYVGASLYEIYSRARGRGAGHAACTY 130
Query: 131 CGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWNTEYIAKGGPLLPAEGK-F 189
CG+++R I+ +A G +AT HNLDDEA + N L + + K PL + G+
Sbjct: 131 CGISRRRILALYARLYGAHKVATAHNLDDEAQTAIVNFLRGDWVGMLKTHPLYRSGGEDL 190
Query: 190 VKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTL--DMKAVLNELEEKRPGTKY 247
V ++KPL ++ E E +Y + ECP+ TL ++ L LEE+ PGT
Sbjct: 191 VPRIKPLRKVYEWETASYVVLHRYPIQEAECPFINMNPTLRARVRTALRVLEERSPGTLL 250
Query: 248 NFVRGYVKKKKLFESEIRRKELKECKICGMPSSGD--ICAFCRFWGLKEEIKFK 299
+ ++ + ++ L C+ CG P+S +C C L EE F+
Sbjct: 251 RMMERLDEELRPLAQAMKPSSLGRCERCGEPTSPKRRLCKLCE---LLEEAGFQ 301
>sp|Q94480|V136_DICDI VEG136 PROTEIN >gi|1513300|gb|AAB06790.1| (U66527) ORFveg136;
similar to Saccharomyces cerevisiae chromosome VII
reading frame ORF YGL211w encoded by EMBL Accession
Number Z72733 [Dictyostelium discoideum]
Length = 357
Score = 109 bits (269), Expect = 5e-23
Identities = 81/296 (27%), Positives = 133/296 (44%), Gaps = 14/296 (4%)
Query: 3 CKFCSREAYIKLHYPKM--YLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDS 60
C+ C+ + L PK +C+E F FE ++ TI L K+ +++ + SGGKDS
Sbjct: 10 CEVCNVSRPV-LKRPKTGEMICKECFYTVFEDEIHHTIISNNLFKRGDRVAIGASGGKDS 68
Query: 61 AVTAYVLNKL------GYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEIL 114
V A ++ L G ++ L I+ GI Y S E K+ E P I+ KE+
Sbjct: 69 TVLAEIMTLLNKKYDYGLDLFLLSIDEGITGYRDDSLETVKRNQEQYPIPSQILSYKELY 128
Query: 115 GYGIGEVKTR---RPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYW 171
+ + ++ + C+ CG+ +R +++ A + I TGHN DD A + +LL
Sbjct: 129 NWTMDDIVKEIGLKGNCTSCGVFRRQALDRGAVMLKANKIVTGHNADDIAETVFMDLLRG 188
Query: 172 NTEYIAKGGPLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPYARGATTLDM 231
+ + + ++ + + KP +RE+V YA L+Y EC YA A
Sbjct: 189 DIPRLQRCVNIITGSEGALPRSKPFKYTYQREIVMYAYFKKLDYFSTECIYAPNAYRGHA 248
Query: 232 KAVLNELEEKRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFC 287
+ L +LE RP + + + + F E + + C CG S DIC C
Sbjct: 249 RDFLKDLEAVRPSIIIDII--HSAENFHFREENKMPVQRNCIQCGYICSNDICMAC 302
>gb|AAF17646.1|AC009978_22 (AC009978) T23E18.11 [Arabidopsis thaliana]
Length = 412
Score = 81.9 bits (199), Expect = 9e-15
Identities = 77/306 (25%), Positives = 126/306 (41%), Gaps = 48/306 (15%)
Query: 26 FKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSAVTAYVLNKL------GYNIECLHI 79
F E FE ++ + I +L K E++ + SGGKDS+V AYVL++L G ++ L I
Sbjct: 63 FYEVFEEEIHQVIVGNRLFKFGERVAIGASGGKDSSVLAYVLSELNRRHSYGLDLFLLSI 122
Query: 80 NLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILGYGIGEVKTR---RPTCSYCGLTKR 136
+ GI Y S E K+ G PL IV K++ G+ + E+ + C++CG+ +R
Sbjct: 123 DEGITGYRDDSLETVKRNEVQYGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRR 182
Query: 137 YIMNKF----------------------------AYDNG-----FDAIATGHNLDDEASF 163
+ +KF A D G D + TGHN DD A
Sbjct: 183 QVRSKFLHSIPSLSKFLQNRLFCFMILCLVEFLKALDRGAALLKVDKLVTGHNADDIAET 242
Query: 164 LLNNLLYWNTEYIAKGGPLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEY--IVEECP 221
++ N+L + +++ + E + + + L R L V + C
Sbjct: 243 VVLNILRGDIARLSRCTSITTGEDGPIPRFTRM--LISRSWTTSPLNVSCAFSKFCCFCI 300
Query: 222 YARGATTLDMKAVLNELEEKRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSG 281
Y+ A +N+LE RP + ++ + + + E C+ CG SS
Sbjct: 301 YSPNAYRGFACEFINDLERLRPRAILDIIKS--GEDFRIATTTKMPEQGTCERCGYISSQ 358
Query: 282 DICAFC 287
C C
Sbjct: 359 KWCKAC 364
>sp|Q57909|Y485_METJA HYPOTHETICAL PROTEIN MJ0485 >gi|2128338|pir||E64360 hypothetical
protein MJ0485 - Methanococcus jannaschii
>gi|1591188|gb|AAB98476.1| (U67498) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 337
Score = 75.7 bits (183), Expect = 6e-13
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 47/270 (17%)
Query: 28 EYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSAVTAYVL----NKLGYNIECLHINLGI 83
EY KV R I K+K++ + ++V +SGGKDS + ++L K G + + +++ I
Sbjct: 58 EYVSTKVGRFINKHKIIAPRDIVIVGLSGGKDSLLLLHLLEVYRRKYGIKLIAVTVDVNI 117
Query: 84 GEYSKKSEE-----YAKKQCELIGAPLHIVRIKEILGYGIGEVKTRR------PTCSYCG 132
G E+ K CE++ P HI+ ++ + E+ T+ C C
Sbjct: 118 GGIRPWKEDTEGVKLIKHHCEMLNVP-HIILKNDLDVVELSEILTKHSKGMEFSPCFSCS 176
Query: 133 LTKRYIMNKFAYDNGFD--------AIATGHNLDDEASFLLNNLLYWNTEYIAKGGPL-- 182
+ KR+++ K A + + +A GHNLDD + +L N+ + E + PL
Sbjct: 177 VIKRHLLGKLAKEIAENENIPYEKVKLAYGHNLDDNSDTILANI--FKGERLKFMRPLTR 234
Query: 183 ------------LPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEE--CPYAR---G 225
+P E + ++P+ + ER+++ G+EY ++ CPY+R
Sbjct: 235 FKYNEVDYQSFKIPLEECII--IRPMLPILERDIIKALEECGIEYYKDKDMCPYSRDRGD 292
Query: 226 ATTLDMKAVLNELEEKRPGTKYNFVRGYVK 255
+ +L +LEE+ P + V +K
Sbjct: 293 SVRRRCHEILEKLEEEIPNIREMVVSSALK 322
>gi|6321227 Ygl211wp [Saccharomyces cerevisiae] >gi|1322852|emb|CAA96927.1|
(Z72733) ORF YGL211w [Saccharomyces cerevisiae]
Length = 193
Score = 72.6 bits (175), Expect = 6e-12
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 10/151 (6%)
Query: 3 CKFC-SREAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSA 61
C+ C SR+A I+ LC++ F FE ++ TI L ++ EK+ V SGGKDS
Sbjct: 22 CELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVANNLFQRGEKVAVGASGGKDST 81
Query: 62 VTAYVLNKL------GYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILG 115
V A++L L G I L I+ GI Y S K+ + G PL I K++
Sbjct: 82 VLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYD 141
Query: 116 YGIGEVKT---RRPTCSYCGLTKRYIMNKFA 143
+ + E+ + R +C+YCG+ +R +++ A
Sbjct: 142 WTMDEIVSVAGIRNSCTYCGVFRRQSLDRGA 172
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.140 0.419
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118618706
Number of Sequences: 2977
Number of extensions: 5157702
Number of successful extensions: 13250
Number of sequences better than 1.0e-10: 27
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 13163
Number of HSP's gapped (non-prelim): 28
length of query: 303
length of database: 189,106,746
effective HSP length: 53
effective length of query: 250
effective length of database: 157,386,935
effective search space: 39346733750
effective search space used: 39346733750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 165 (68.7 bits)