BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1101 (PAB1101) DE:Transport protein
(746 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75018 transport protein PAB1101 - Pyrococcus abyssi (strai... 1435 0.0
pir||H71453 hypothetical protein PH0287 - Pyrococcus horikoshii ... 1267 0.0
sp|Q58957|YF62_METJA PUTATIVE MEMBRANE PROTEIN MJ1562 >gi|212893... 255 2e-66
gi|11498828 conserved hypothetical protein [Archaeoglobus fulgid... 231 3e-59
gi|11498071 conserved hypothetical protein [Archaeoglobus fulgid... 203 5e-51
gb|AAG19780.1| (AE005063) Vng1476c [Halobacterium sp. NRC-1] 173 5e-42
pir||D70131 conserved hypothetical integral membrane protein BB0... 145 1e-33
pir||E72272 conserved hypothetical protein - Thermotoga maritima... 141 3e-32
sp|O54101|MMLB_STRCO PUTATIVE MEMBRANE PROTEIN SC10A5.10C >gi|74... 115 2e-24
pir||D72329 hypothetical protein - Thermotoga maritima (strain M... 102 1e-20
gb|AAD44231.1|AF143772_37 (AF143772) TmtpB [Mycobacterium avium] 101 3e-20
sp|O53784|MML5_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL5 >gi|7478343... 101 4e-20
emb|CAB90894.1| (AL355753) putative integral membrane protein. [... 97 6e-19
pir||B81282 probable integral membrane protein Cj1373 [imported]... 94 4e-18
emb|CAB89762.1| (AL354616) putative integral membrane protein. [... 94 5e-18
emb|CAB89749.1| (AL354616) putative membrane protein [Streptomyc... 92 2e-17
dbj|BAB04439.1| (AP001509) unknown conserved protein in others [... 89 1e-16
emb|CAB59662.1| (AL132674) putative membrane transport protein [... 87 5e-16
sp|P54881|MML4_MYCLE PUTATIVE MEMBRANE PROTEIN MMPL4 >gi|699243|... 87 5e-16
sp|O50439|MMLA_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL10 >gi|747902... 86 1e-15
sp|Q11171|MML2_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL2 >gi|7478399... 85 3e-15
sp|O53735|MML4_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL4 >gi|7478403... 85 3e-15
sp|O07800|MML8_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL8 >gi|7478406... 83 1e-14
emb|CAB56653.1| (AL121596) putative membrane transport protein [... 82 2e-14
gb|AAF97217.1|AF271635_1 (AF271635) putative transport membrane ... 82 3e-14
pir||E71280 probable antibiotic transport protein - syphilis spi... 80 7e-14
sp|Q50585|MMLC_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL12 >gi|747839... 79 2e-13
sp|Q49619|MMLA_MYCLE PUTATIVE MEMBRANE PROTEIN MMPL10 >gi|214597... 78 3e-13
pir||A75560 conserved hypothetical protein - Deinococcus radiodu... 76 1e-12
sp|Q53902|MMLA_STRCO PUTATIVE MEMBRANE PROTEIN ACTII-3 >gi|80715... 75 2e-12
pir||T23399 hypothetical protein K07C10.1 - Caenorhabditis elega... 75 4e-12
sp|P96706|YDGH_BACSU PUTATIVE MEMBRANE PROTEIN YDGH >gi|7475936|... 74 7e-12
emb|CAB86119.1| (AL163003) putative integral membrane protein [S... 73 9e-12
sp|P95211|MML1_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL1 >gi|7478394... 72 3e-11
>pir||A75018 transport protein PAB1101 - Pyrococcus abyssi (strain Orsay)
>gi|5459097|emb|CAB50583.1| (AJ248288) Transport protein
[Pyrococcus abyssi]
Length = 746
Score = 1435 bits (3673), Expect = 0.0
Identities = 746/746 (100%), Positives = 746/746 (100%)
Query: 1 MLRKIARVIVIYRHSLAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNE 60
MLRKIARVIVIYRHSLAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNE
Sbjct: 1 MLRKIARVIVIYRHSLAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNE 60
Query: 61 FGGSGSALIYVKIKNNDNVVDIRDPKIIEAMYSLEQRLREKEYVTDTFSIADLMVQILGR 120
FGGSGSALIYVKIKNNDNVVDIRDPKIIEAMYSLEQRLREKEYVTDTFSIADLMVQILGR
Sbjct: 61 FGGSGSALIYVKIKNNDNVVDIRDPKIIEAMYSLEQRLREKEYVTDTFSIADLMVQILGR 120
Query: 121 LPKNMDEVKFVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERT 180
LPKNMDEVKFVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERT
Sbjct: 121 LPKNMDEVKFVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERT 180
Query: 181 NFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPL 240
NFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPL
Sbjct: 181 NFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPL 240
Query: 241 IFGVVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEE 300
IFGVVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEE
Sbjct: 241 IFGVVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEE 300
Query: 301 AIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILE 360
AIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILE
Sbjct: 301 AIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILE 360
Query: 361 EEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYGASKIT 420
EEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYGASKIT
Sbjct: 361 EEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYGASKIT 420
Query: 421 TEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDPTLVRDILRFEREIKAD 480
TEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDPTLVRDILRFEREIKAD
Sbjct: 421 TEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDPTLVRDILRFEREIKAD 480
Query: 481 SYINNVFETQSIADVVIQKYGYIPQDKEKISEAIEGSSLVSSDYSMTIIKLKGNFMGVTQ 540
SYINNVFETQSIADVVIQKYGYIPQDKEKISEAIEGSSLVSSDYSMTIIKLKGNFMGVTQ
Sbjct: 481 SYINNVFETQSIADVVIQKYGYIPQDKEKISEAIEGSSLVSSDYSMTIIKLKGNFMGVTQ 540
Query: 541 SEFNRIMEYFERAIQRADFPPGVKVELAGESYLNYVLNDLVNEELGKISTIGTLIVVMVV 600
SEFNRIMEYFERAIQRADFPPGVKVELAGESYLNYVLNDLVNEELGKISTIGTLIVVMVV
Sbjct: 541 SEFNRIMEYFERAIQRADFPPGVKVELAGESYLNYVLNDLVNEELGKISTIGTLIVVMVV 600
Query: 601 FAIFRRPTVSIAMIMPMFLGALWTIGYMGLAGIPFSQTLAGVVSMIVGLGVDYGMHITHR 660
FAIFRRPTVSIAMIMPMFLGALWTIGYMGLAGIPFSQTLAGVVSMIVGLGVDYGMHITHR
Sbjct: 601 FAIFRRPTVSIAMIMPMFLGALWTIGYMGLAGIPFSQTLAGVVSMIVGLGVDYGMHITHR 660
Query: 661 FLEELNEGNKTPIITALESVGPGIFVGALTTAGGFLALLSAQLTAIHDFGRVLAVGIFAS 720
FLEELNEGNKTPIITALESVGPGIFVGALTTAGGFLALLSAQLTAIHDFGRVLAVGIFAS
Sbjct: 661 FLEELNEGNKTPIITALESVGPGIFVGALTTAGGFLALLSAQLTAIHDFGRVLAVGIFAS 720
Query: 721 MFAAYLVTPAILQLEFGRKISKEVRE 746
MFAAYLVTPAILQLEFGRKISKEVRE
Sbjct: 721 MFAAYLVTPAILQLEFGRKISKEVRE 746
>pir||H71453 hypothetical protein PH0287 - Pyrococcus horikoshii
>gi|3256676|dbj|BAA29359.1| (AP000001) 787aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 787
Score = 1267 bits (3242), Expect = 0.0
Identities = 635/747 (85%), Positives = 712/747 (95%), Gaps = 2/747 (0%)
Query: 1 MLRKIARVIVIYRHSLAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNE 60
MLRKIAR+IV+YRHSLAV+T+FLLILS YGIT+L+FE+DLSKQLPEDLEAVK+YFTLQNE
Sbjct: 42 MLRKIARIIVVYRHSLAVITIFLLILSGYGITKLKFESDLSKQLPEDLEAVKNYFTLQNE 101
Query: 61 FGGSGSALIYVKIKNNDNVVDIRDPKIIEAMYSLEQRLREKEYVTDTFSIADLMVQILGR 120
FGGSGSALIYVKIK+ D V DIRDP +I+AMYSLEQRL++KEYVTDTFSIADL VQILGR
Sbjct: 102 FGGSGSALIYVKIKSPDKVADIRDPTVIKAMYSLEQRLKDKEYVTDTFSIADLAVQILGR 161
Query: 121 LPKNMDEVKFVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERT 180
LP N++EVKFVLNMLP +ARNGL+S DYSSTIIIV+LNREKNQ+ALVRVYN+I+ EIE++
Sbjct: 162 LPNNIEEVKFVLNMLPEDARNGLVSRDYSSTIIIVSLNREKNQRALVRVYNEIKNEIEKS 221
Query: 181 NFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPL 240
NFP+GVEVVLTGDLGITYKILEMLQNDMNRTMA++GIIV+++LLYFYKSPIRMLVPL+PL
Sbjct: 222 NFPEGVEVVLTGDLGITYKILEMLQNDMNRTMAVAGIIVIILLLYFYKSPIRMLVPLIPL 281
Query: 241 IFGVVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEE 300
IFGV MTLGFMGLLGIPLDIAT+TVGAMIIGMGIDYGVHVTNRYYEER KG+S EEAAEE
Sbjct: 282 IFGVTMTLGFMGLLGIPLDIATSTVGAMIIGMGIDYGVHVTNRYYEERNKGRSPEEAAEE 341
Query: 301 AIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILE 360
AI+ETGKALLGAALTTIAGFLALS+SILPSLKRLS+SLVMGLGLAA+NAVIVTPALAILE
Sbjct: 342 AISETGKALLGAALTTIAGFLALSLSILPSLKRLSISLVMGLGLAAVNAVIVTPALAILE 401
Query: 361 EEFREKVMKKK-EIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYGASKI 419
EEFR K++ KK EII+IGG + K+ FIFS LG IKRSPW ALLIA++ISGVSLYGA+KI
Sbjct: 402 EEFRTKILGKKGEIISIGGEEGKLGFIFSRLGLFIKRSPWLALLIAVMISGVSLYGATKI 461
Query: 420 TTEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDPTLVRDILRFEREIKA 479
TTEVRLEKMIP D+PEIQAL+DIRSEFGGQDE+TILIKADDVRDP +VR ILRFERE+KA
Sbjct: 462 TTEVRLEKMIPMDMPEIQALTDIRSEFGGQDEITILIKADDVRDPEIVRSILRFEREVKA 521
Query: 480 DSYINNVFETQSIADVVIQKYGYIPQDKEKISEAIEGSSLVSSDYSMTIIKLKGNFMGVT 539
DSYINNVFE++SIADVVI+KYGYIP+DKEKI++A+EGSSLVSSDYS+TI+KLKGNFMGVT
Sbjct: 522 DSYINNVFESESIADVVIEKYGYIPEDKEKIAKALEGSSLVSSDYSLTIVKLKGNFMGVT 581
Query: 540 QSEFNRIMEYFERAIQRADFPPGVKVELAGESYLNYVLNDLVNEELGKISTIGTLIVVMV 599
Q +FN+IMEYFE ++RA+FPPGVK ELAGESYLNYVL++LVNEELGKISTIGT+IVV++
Sbjct: 582 QEDFNKIMEYFEEELKRANFPPGVKAELAGESYLNYVLDNLVNEELGKISTIGTIIVVLI 641
Query: 600 VFAIFRRPTVSIAMIMPMFLGALWTIGYMGLAGIPFSQTLAGVVSMIVGLGVDYGMHITH 659
VFAIFRRPTV++AMIMPMFLGALWTIGYMGLAGIPFSQTLAGVVSMIVGLGVDYGMHITH
Sbjct: 642 VFAIFRRPTVAVAMIMPMFLGALWTIGYMGLAGIPFSQTLAGVVSMIVGLGVDYGMHITH 701
Query: 660 RFLEELNEGNKTPIITALESVGPGIFVGALTTAGGFLALLSAQLTAIHDFGRVLAVGIFA 719
RFLEEL EGNKTPIITA+ESVGPGI +GALTTAGGFLALL+ +LTAIHDFG+VLAVGIF+
Sbjct: 702 RFLEELKEGNKTPIITAMESVGPGILIGALTTAGGFLALLTGRLTAIHDFGKVLAVGIFS 761
Query: 720 SMFAAYLVTPAILQLEFGRKISKEVRE 746
SM AAYLVTPAILQLEFGRKI KEV+E
Sbjct: 762 SMLAAYLVTPAILQLEFGRKI-KEVKE 787
>sp|Q58957|YF62_METJA PUTATIVE MEMBRANE PROTEIN MJ1562 >gi|2128938|pir||A64495
hypothetical protein MJ1562 - Methanococcus jannaschii
>gi|1592186|gb|AAB99583.1| (U67596) M. jannaschii
predicted coding region MJ1562 [Methanococcus
jannaschii]
Length = 388
Score = 255 bits (644), Expect = 2e-66
Identities = 128/378 (33%), Positives = 229/378 (59%), Gaps = 8/378 (2%)
Query: 1 MLRKIARVIVIYRHS----LAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFT 56
MLR+I + + + + ++ + + + + T ++ +T K LP+D +K+ +
Sbjct: 5 MLREILKKVAHFSEQKPFLMLLIILIITVFAGISATNVKSQTAFEKMLPQDNPIIKTLYE 64
Query: 57 LQNEFGGSGSALIYVKIK---NNDNVVDIRDPKIIEAMYSLEQRLREKEYVTDTFSIADL 113
+++EFGG+ I +K+K ++D VVDIRDP++++A+ LE LR + +T S D+
Sbjct: 65 VRDEFGGTDVITICIKLKPSDSSDKVVDIRDPRVLKAIKELEDNLRYVDGITSVSSPVDI 124
Query: 114 MVQIL-GRLPKNMDEVKFVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYND 172
++Q G +P ++D VK +LN LP + R + + DYS T++ + +QK L+RV +D
Sbjct: 125 IIQKNNGIVPNDIDTVKDILNKLPEDKRKRIFNSDYSMTVVNAYTDAGGDQKKLMRVMDD 184
Query: 173 IEREIERTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIR 232
+ IE T FP GVEV+ TG + + E+++ + T + I +++IL+ +++ P+
Sbjct: 185 VNERIEETPFPPGVEVIATGTPPMRKLMDELMKESQSFTTTVGLIGILIILIIYFRKPLS 244
Query: 233 MLVPLVPLIFGVVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGK 292
++PL+P++ V+ T G MGLL IPLD+AT +G++I+G+GIDYG+H+ +RY EER KG
Sbjct: 245 SIMPLLPVLIAVIWTGGAMGLLDIPLDMATAGIGSLILGLGIDYGIHLMHRYDEERRKGM 304
Query: 293 SLEEAAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIV 352
+++A E A+ ETG A++ TT+ GFLAL ++ LP + L +G+ + + +
Sbjct: 305 PIDKAIETAVVETGTAVMATTATTVVGFLALVLAPLPMMANLGKVCALGISFCMVVVLTL 364
Query: 353 TPALAILEEEFREKVMKK 370
PAL ++EE ++K+
Sbjct: 365 LPALIVIEERHIMPLIKR 382
Score = 202 bits (509), Expect = 1e-50
Identities = 115/359 (32%), Positives = 195/359 (54%), Gaps = 22/359 (6%)
Query: 395 KRSPWTALLIALIISGVSLYGASKITTEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTI 454
++ P+ LLI LII+ + A+ + ++ EKM+P D P I+ L ++R EFGG D +TI
Sbjct: 18 EQKPFLMLLIILIITVFAGISATNVKSQTAFEKMLPQDNPIIKTLYEVRDEFGGTDVITI 77
Query: 455 LIKAD---------DVRDPTLVRDILRFEREIKADSYINNVFETQSIADVVIQKY-GYIP 504
IK D+RDP +++ I E ++ Y++ + S D++IQK G +P
Sbjct: 78 CIKLKPSDSSDKVVDIRDPRVLKAIKELEDNLR---YVDGITSVSSPVDIIIQKNNGIVP 134
Query: 505 QDKEKISEAI------EGSSLVSSDYSMTIIKLKGNFMGVTQSEFNRIMEYFERAIQRAD 558
D + + + + + + +SDYSMT++ + G Q + R+M+ I+
Sbjct: 135 NDIDTVKDILNKLPEDKRKRIFNSDYSMTVVNAYTD-AGGDQKKLMRVMDDVNERIEETP 193
Query: 559 FPPGVKVELAGESYLNYVLNDLVNEELGKISTIGTLIVVMVVFAIFRRPTVSIAMIMPMF 618
FPPGV+V G + ++++L+ E +T+G + +++++ FR+P SI ++P+
Sbjct: 194 FPPGVEVIATGTPPMRKLMDELMKESQSFTTTVGLIGILIILIIYFRKPLSSIMPLLPVL 253
Query: 619 LGALWTIGYMGLAGIPFSQTLAGVVSMIVGLGVDYGMHITHRFLEELNEGN--KTPIITA 676
+ +WT G MGL IP AG+ S+I+GLG+DYG+H+ HR+ EE +G I TA
Sbjct: 254 IAVIWTGGAMGLLDIPLDMATAGIGSLILGLGIDYGIHLMHRYDEERRKGMPIDKAIETA 313
Query: 677 LESVGPGIFVGALTTAGGFLALLSAQLTAIHDFGRVLAVGIFASMFAAYLVTPAILQLE 735
+ G + TT GFLAL+ A L + + G+V A+GI M + PA++ +E
Sbjct: 314 VVETGTAVMATTATTVVGFLALVLAPLPMMANLGKVCALGISFCMVVVLTLLPALIVIE 372
>gi|11498828 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7430104|pir||D69403 conserved hypothetical protein
AF1229 - Archaeoglobus fulgidus
>gi|2649351|gb|AAB90013.1| (AE001019) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 750
Score = 231 bits (582), Expect = 3e-59
Identities = 193/758 (25%), Positives = 359/758 (46%), Gaps = 49/758 (6%)
Query: 1 MLRKIARVIVIYRHSLAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNE 60
+L ++AR I + + +LILSA+ + + +D + Y Q +
Sbjct: 5 LLDRVARFIARRPGFVISIISIILILSAFSAQNVGLTSGTESMFSKDNVIYRQYKLYQKD 64
Query: 61 FGGSGSALIYVKIKNNDNVVDIRDPKIIEAMYSLEQRLREKEYVTDTFSIADLMVQILGR 120
FG G+ ++V IK +D V + ++ + + L++R+ E E V+ S A ++ + G
Sbjct: 65 FG-VGADQLFVLIKGDDVV----NSEVYQYLLDLQKRIEEIEGVSSVVSPASIVSSLYGG 119
Query: 121 LPKNMDEVKFVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERT 180
LP + ++ ++ + + + ++I+ L + K + ++E+ I T
Sbjct: 120 LPSDESKISIATSLYASD-----LVPKPTLAMMIIQLGTADDTKQ-EEIAIEVEKVISFT 173
Query: 181 NFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRM----LVP 236
N P G+ + LTG ++Y+I + TM +S I++VL+L + +R +P
Sbjct: 174 NPPHGLVLQLTGGPALSYQIEREIGKSFGITMMVSIILMVLLLFLTFSGAVRKKYTAFLP 233
Query: 237 LVPLIFGVVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEE 296
LV + V + G M +LGIPL T M+IG+ I+YG + NRY EER +G+ +++
Sbjct: 234 LVISVMSVTVVYGLMPILGIPLSEHTNGALPMLIGLAIEYGAQLQNRYEEERREGRDVDD 293
Query: 297 AAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPAL 356
A +I TG A++ A +TT+ GF+++ +P++ + + +GL +A L + PA+
Sbjct: 294 AVVISITRTGLAIVMALITTVIGFMSMLAPGMPAMAQFGIISSLGLIVAYLLTLTFLPAV 353
Query: 357 AILEEEFRE-KVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYG 415
L + + + K K++E ++G + +S I ++ P L+ A II LY
Sbjct: 354 LKLIDHWNDAKEQKREEEKSVGTLERSLSAISTLTA----TRPVGILVAASIIVLFGLYA 409
Query: 416 ASKITTEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDPTLVRDILRFER 475
A +I E K +P DL +Q +I GGQ T++++ D++ TL +
Sbjct: 410 APQIGLETNYNKYVPQDLTAMQRFKEIERLVGGQATYTLVLEVDELNAETLKEIDELSKY 469
Query: 476 EIKADSYINNVFETQSIADVVIQKYGY--IPQDKEKISEAIEGSSLVSSDYSMTII--KL 531
++ + I + + V + YG+ +P+ ++ + + S+L + S I ++
Sbjct: 470 IVEKEELIYDYSSITKLISEVRKAYGFEGLPESDAELMQIL--SALPQEEVSRYISGGQI 527
Query: 532 KGNFMGVTQSEFNRIMEYFERAIQRADFPPGVKVELAGESYLNYVL-NDLVNEELGKIST 590
+F S+ I + ++I R VE G S YV ++ E+G++ T
Sbjct: 528 AVHFSSNADSQDEYISTH--KSIVR-------DVEFFGWSGGYYVTGGPVIYGEMGRLMT 578
Query: 591 IGT--------LIVVMVVFAIFR--RPTVSIAMIMPMFLGALWTIGYMGLAGIPFSQTLA 640
G +++M++ A++R R V + + +GA+ TI M L G +
Sbjct: 579 SGQTTMTVVAYALIIMLLLAVYRSIRKAVVPLIAITSVIGAMNTI--MFLTGTKQTMISI 636
Query: 641 GVVSMIVGLGVDYGMHITHRFLEELNEGNKTPII-TALESVGPGIFVGALTTAGGFLALL 699
+ S+ +GLG+D+ +H+ R+ EE + + +E G I ALT AGGF +L+
Sbjct: 637 ALNSITLGLGIDFSIHVLERYFEERAAFSPVEAVRRTIERTGKAITTSALTMAGGFGSLM 696
Query: 700 SAQLTAIHDFGRVLAVGIFASMFAAYLVTPAILQLEFG 737
+ + +FG + V I S+ AA V PA L L G
Sbjct: 697 FSTFPIMQNFGFIALVAILFSLLAALTVVPAFLMLTEG 734
Score = 115 bits (285), Expect = 2e-24
Identities = 87/360 (24%), Positives = 174/360 (48%), Gaps = 23/360 (6%)
Query: 16 LAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNEFGGSGSALIYVKIKN 75
+ V +++ Y Q+ ET+ +K +P+DL A++ + ++ GG + + ++
Sbjct: 395 ILVAASIIVLFGLYAAPQIGLETNYNKYVPQDLTAMQRFKEIERLVGGQATYTLVLE--- 451
Query: 76 NDNVVDIRDPKIIEAMYSLEQRLREKE-YVTDTFSIADLMVQI-----LGRLPKNMDEVK 129
VD + + ++ + L + + EKE + D SI L+ ++ LP++ E+
Sbjct: 452 ----VDELNAETLKEIDELSKYIVEKEELIYDYSSITKLISEVRKAYGFEGLPESDAELM 507
Query: 130 FVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERTNFPQGVEVV 189
+L+ LP E + ISG + N + +Q + + I R++E + G V
Sbjct: 508 QILSALPQEEVSRYISGGQIAVHFSSNAD---SQDEYISTHKSIVRDVEFFGWSGGYYV- 563
Query: 190 LTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPL--IFGVVMT 247
TG I ++ ++ + ++ +++++LL Y+S + +VPL+ + + G + T
Sbjct: 564 -TGGPVIYGEMGRLMTSGQTTMTVVAYALIIMLLLAVYRSIRKAVVPLIAITSVIGAMNT 622
Query: 248 LGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIAETGK 307
+ F L G + + + ++ +G+GID+ +HV RY+EER +E A I TGK
Sbjct: 623 IMF--LTGTKQTMISIALNSITLGLGIDFSIHVLERYFEERAAFSPVE-AVRRTIERTGK 679
Query: 308 ALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILEEEFREKV 367
A+ +ALT GF +L S P ++ ++ + + L A+ V PA +L E ++
Sbjct: 680 AITTSALTMAGGFGSLMFSTFPIMQNFGFIALVAILFSLLAALTVVPAFLMLTEGIEARI 739
>gi|11498071 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7430103|pir||C69307 conserved hypothetical protein
AF0459 - Archaeoglobus fulgidus
>gi|2650170|gb|AAB90778.1| (AE001073) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 736
Score = 203 bits (512), Expect = 5e-51
Identities = 170/683 (24%), Positives = 314/683 (45%), Gaps = 54/683 (7%)
Query: 69 IYVKIKNNDNVVDIRDPKIIEAMYSLEQRLREKEYVTDTFSIADLMVQILGRLPKNMDEV 128
+Y+ +K D + ++E M SL++ L ++ V T S A ++ +LG +P + + V
Sbjct: 78 VYIIVKAED----VLSRDVMEYMLSLQKVLEGRDGVVSTSSPASILRDVLGDIPDSEELV 133
Query: 129 KFVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERTNFPQGVEV 188
L + + S +I V + +N + L+ + +IER ++ + P GV V
Sbjct: 134 GETAERLAKS-----LLPERSFALISVQIESMENDR-LMELAEEIERILQFVSPPPGVVV 187
Query: 189 VLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIR----MLVPLVPLIFGV 244
+TG + Y+I + ++ D+ RT I+ + ++ +L+ + +R +L PL+ + V
Sbjct: 188 DVTGGAVLMYQIAKAVEEDVYRTFFIASVTMIAVLVAVFSGVVRSKLTVLFPLIVSLMSV 247
Query: 245 VMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIAE 304
+ G + LLG+ + + ++IG+ IDY + NRY EER G+ ++EA EEA+
Sbjct: 248 AVMAGLLPLLGLQMTEYNSATIPILIGLAIDYAAQLQNRYEEERRGGREVDEALEEALNH 307
Query: 305 TGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILEEEFR 364
T L A TT+ GF ++ +PSL S L +GL A L + P+L L +
Sbjct: 308 TRFPLFMAMATTVIGFASMCAPGIPSLFWFSFLLSVGLITAFLLSNTFLPSLLKLSDR-- 365
Query: 365 EKVMKKKEIIAIGGGKSKIS-----FIFSMLGKAIKRSPWTALLIALIISGVSLYGASKI 419
GG + IS + + + K + L + LI+ V Y ++ +
Sbjct: 366 ------------GGREESISPGILEKLLTTIAKVTIANSRKILALTLILIVVGAYASTHV 413
Query: 420 TTEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDPTLVRDILRFEREIKA 479
E K P DLP + +I + Q +++ + + +++ E K
Sbjct: 414 ELETNRRKYAPPDLPALVKFEEIERKVSPQYVYALVLSTERID----AESVVKAEELAKY 469
Query: 480 DSYINNVFETQSIADVVIQKYGYIPQDKEKISEAIEGSSLVSSDYSMTIIKLKGNFMGV- 538
S +++ S+ + + YG IP E S+AI+ +L S YS I GN + V
Sbjct: 470 ISSREEIYDYDSLGKTLEEYYGAIP--AESFSKAID--ALPKSIYSRFI---SGNQLAVY 522
Query: 539 ------TQSEFNRIMEYFERAIQRADFPPGVKVELAGESYLNYVLNDLVNEELGKISTIG 592
T+ E ++M E ++ ++ + G + L++++ L ++ +
Sbjct: 523 FYTNTQTEEEVEKMMRSIENDLRFLEWDGDYYI--TGFPVILGHLSEVLFSSLNLMTLVA 580
Query: 593 TLIVVMVVFAIFRRPTVSIAMIMPMFLGALWTIGYMGLAGIPFSQTLAGVVSMIVGLGVD 652
L++V + +R +I ++ + + M L GI + + S+++G+G+D
Sbjct: 581 YLLIVTFLLLAYRSVVRAIIPLISISVAVASMNVCMLLMGIKQTTISIALNSIVLGMGID 640
Query: 653 YGMHITHRFLEELNE-GNKTPIITALESVGPGIFVGALTTAGGFLALLSAQLTAIHDFGR 711
Y +HIT R+ EE + G + + +E G + ALTTAGGF AL + + +FG
Sbjct: 641 YSIHITERYFEERGKFGVEESVKRTVERTGKAVLTSALTTAGGFGALYFSTFPVLSNFGI 700
Query: 712 VLAVGIFASMFAAYLVTPAILQL 734
+ + I S+ AA PA+L L
Sbjct: 701 LAFIAIIFSLLAATSAVPALLIL 723
Score = 146 bits (364), Expect = 1e-33
Identities = 97/367 (26%), Positives = 178/367 (48%), Gaps = 17/367 (4%)
Query: 1 MLRKIARVIVIYRHSLAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNE 60
+L IA+V + + +T+ L+++ AY T + ET+ K P DL A+ + ++ +
Sbjct: 380 LLTTIAKVTIANSRKILALTLILIVVGAYASTHVELETNRRKYAPPDLPALVKFEEIERK 439
Query: 61 FGGSGSALIYVKIKNNDNVVDIRDPKIIEAMYSLEQRLREKEYVTDTFSIADLMVQILGR 120
+Y + + + + D + + L + + +E + D S+ + + G
Sbjct: 440 VSPQ---YVYALVLSTERI----DAESVVKAEELAKYISSREEIYDYDSLGKTLEEYYGA 492
Query: 121 LPKNMDEVKFVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERT 180
+P + ++ LP + ISG+ + N E+ + ++R + R +E
Sbjct: 493 IPA--ESFSKAIDALPKSIYSRFISGNQLAVYFYTNTQTEEEVEKMMRSIENDLRFLEWD 550
Query: 181 NFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPL 240
+ +TG I + E+L + +N ++ +++V LL Y+S +R ++PL+ +
Sbjct: 551 G-----DYYITGFPVILGHLSEVLFSSLNLMTLVAYLLIVTFLLLAYRSVVRAIIPLISI 605
Query: 241 IFGVVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEE 300
V M L+GI + + ++++GMGIDY +H+T RY+EERGK +EE+ +
Sbjct: 606 SVAVASMNVCMLLMGIKQTTISIALNSIVLGMGIDYSIHITERYFEERGKF-GVEESVKR 664
Query: 301 AIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILE 360
+ TGKA+L +ALTT GF AL S P L + + + + L A PAL IL
Sbjct: 665 TVERTGKAVLTSALTTAGGFGALYFSTFPVLSNFGILAFIAIIFSLLAATSAVPALLILY 724
Query: 361 EE--FRE 365
E+ FRE
Sbjct: 725 EKNYFRE 731
>gb|AAG19780.1| (AE005063) Vng1476c [Halobacterium sp. NRC-1]
Length = 746
Score = 173 bits (435), Expect = 5e-42
Identities = 167/680 (24%), Positives = 293/680 (42%), Gaps = 53/680 (7%)
Query: 81 DIRDPKIIEAMYSLEQRLREKEYVTDTFSIADLMVQILGRLPKNMDEVKFVLNMLPPEAR 140
DI +P IEA+ ++R+ + + V S AD + GR+P + +++ V+
Sbjct: 75 DITEPSAIEAIDRYDRRMSQTQDVYAVRSPADQVRAAYGRIPDSKSKIESVIG------- 127
Query: 141 NGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERTNFPQGVEVVLTGDLGITYKI 200
S DY++ I + + + Q+ +Y + + FP V +TGD + ++
Sbjct: 128 ----SPDYTTIQIATDTDLTQQQQR--PIYTEAVSTSDWARFPASVTATVTGDAAFSAQL 181
Query: 201 LEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPLIFGVVMTLGFMGLLGIPLDI 260
++Q + + ++ ++V+ L + ++ L+P+V + GV+ T G +G GIP
Sbjct: 182 STVIQQSTQKLLGLAVGLMVIALFFLFRGVRLRLLPIVAVFVGVIYTFGAIGYGGIPNST 241
Query: 261 ATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKALLGAALTTIAGF 320
T+ V ++IG+GIDY V R YEE + EA A+ G +L A L GF
Sbjct: 242 MTSAVFPILIGLGIDYSVQFHER-YEEELETHPPREALPNALGGVGPPVLIAMLAAALGF 300
Query: 321 LALSISI-LPSLKRLSVSLVMGLGLA-ALNAVIVTPALAILEEEFREKVMKKKEIIAIGG 378
A +S P++ + + ++G+ L A +++ L I + + A GG
Sbjct: 301 GATWVSTSSPAIIWFAQTSILGVLLTYAAGILVLLAGLTIYIRRWGD----DSPAAADGG 356
Query: 379 G----------KSKISFIFSMLGKA---IKRSPWTALLIALIISGVSLYGASKITTEVRL 425
S+I + S LG+ + P T L IAL++SGV AS + T
Sbjct: 357 DPEAAHAEVDEDSRIGLVGSTLGRTSRILASHPMTVLAIALVLSGVGFQVASSLGTLADT 416
Query: 426 EKMIPTDLPEIQALSDIRSEFGGQDEVT--ILIKADDVRDPTLVRDILRFEREIKADSYI 483
E+ IP DLP L RS+ GG + +L+ ++ P + LR+ + +
Sbjct: 417 EEFIPQDLPAYVDLQQFRSQTGGGTSTSYDVLVTGTHLKHP----ETLRWMDGLNDVATQ 472
Query: 484 NNVFETQSIADVVIQKY--GYIPQDKEKISEAI-----EGSSLVSSDYSMTIIKLKGNFM 536
+ E +++Y G IP+ + + E +D I M
Sbjct: 473 APLVEGVDTPAGAVKQYNGGEIPRTTSGVERVLAQMPTEQRQRYYNDGRAHITVASPQDM 532
Query: 537 GVTQSEFNRIMEYFERAIQRADFPPGVKVELAGESYLNY-VLNDLVNEELGKISTIGTLI 595
T + +E + ++ ++ PPGV E+ G S + + D +N + +G L
Sbjct: 533 --TTGQVLSFLENSQESLDYSNPPPGVTAEVTGTSSIAVPSIIDQINSR-NTTTGLGILF 589
Query: 596 VVMVVFAIFRRPTVSIAMIMPMFLGALWTIGYMGLAGIPFSQTLAGVVSMIVGLGVDYGM 655
V ++ +R ++A ++PM W YM IP S A + +M VG+G +Y +
Sbjct: 590 VFALLGLYYRDLVKAVAPLVPMVFVIGWQNIYMLALDIPVSPLGASLGAMTVGIGAEYTI 649
Query: 656 HITHRFLEELNE---GNKTPIITALESVGPGIFVGALTTAGGFLALLSAQLTAIHDFGRV 712
+ R+ EE G + A VG I V +TT GF AL+ + + FG +
Sbjct: 650 IVMERYYEEKQHNGYGRLDAVEIAASRVGKAITVSGMTTVFGFSALILSPFPVLSSFGFL 709
Query: 713 LAVGIFASMFAAYLVTPAIL 732
IF ++ A+ P L
Sbjct: 710 TVGVIFLTLIASLATLPPTL 729
Score = 121 bits (300), Expect = 3e-26
Identities = 97/359 (27%), Positives = 171/359 (47%), Gaps = 19/359 (5%)
Query: 382 KISFIFSMLGKAIKRSPWTALLIALIISGVSLYGASKITTEVRLEKMIPTDLPEIQALSD 441
K+ F+ +G ++ P LLIA ++ V++ GA++IT+ + + ++ P +A SD
Sbjct: 3 KLRSAFASIGDRVQARPVATLLIAGLLILVAIGGAAQITSVTGDDAFVGSN-PTYEAFSD 61
Query: 442 IRSEFGGQDEVTILIKADDVRDPTLVRDILRFEREIKADSYINNVFETQSIADVVIQKYG 501
+ +LI+ D + +P+ + I R++R + S +V+ +S AD V YG
Sbjct: 62 SFDH----GNIAVLIRGD-ITEPSAIEAIDRYDRRM---SQTQDVYAVRSPADQVRAAYG 113
Query: 502 YIPQDKEKISEAIEGSSLVSSDYSMTIIKLKGNFMGVTQSEFNRIMEYFERAIQRADFPP 561
IP K KI I S DY+ I + +TQ + I A FP
Sbjct: 114 RIPDSKSKIESVIG-----SPDYTTIQIATDTD---LTQQQQRPIYTEAVSTSDWARFPA 165
Query: 562 GVKVELAGESYLNYVLNDLVNEELGKISTIGTLIVVMVVFAIFRRPTVSIAMIMPMFLGA 621
V + G++ + L+ ++ + K+ + ++V+ +F +FR + + I+ +F+G
Sbjct: 166 SVTATVTGDAAFSAQLSTVIQQSTQKLLGLAVGLMVIALFFLFRGVRLRLLPIVAVFVGV 225
Query: 622 LWTIGYMGLAGIPFSQTLAGVVSMIVGLGVDYGMHITHRFLEEL-NEGNKTPIITALESV 680
++T G +G GIP S + V +++GLG+DY + R+ EEL + + AL V
Sbjct: 226 IYTFGAIGYGGIPNSTMTSAVFPILIGLGIDYSVQFHERYEEELETHPPREALPNALGGV 285
Query: 681 GPGIFVGALTTAGGFLAL-LSAQLTAIHDFGRVLAVGIFASMFAAYLVTPAILQLEFGR 738
GP + + L A GF A +S AI F + +G+ + A LV A L + R
Sbjct: 286 GPPVLIAMLAAALGFGATWVSTSSPAIIWFAQTSILGVLLTYAAGILVLLAGLTIYIRR 344
Score = 103 bits (255), Expect = 6e-21
Identities = 90/358 (25%), Positives = 160/358 (44%), Gaps = 15/358 (4%)
Query: 10 VIYRHSLAVVTMFLLILSAYGI---TQLRFETDLSKQLPEDLEAVKSYFTLQNEFGGSGS 66
++ H + V+ + L+LS G + L D + +P+DL A +++ GG S
Sbjct: 384 ILASHPMTVLAI-ALVLSGVGFQVASSLGTLADTEEFIPQDLPAYVDLQQFRSQTGGGTS 442
Query: 67 ALIYVKIKNNDNVVDIRDPKIIEAMYSLEQRLREKEYVTDTFSIADLMVQILG-RLPKNM 125
V + ++ P+ + M L + V + A + Q G +P+
Sbjct: 443 TSYDVLVTGTH----LKHPETLRWMDGLNDVATQAPLVEGVDTPAGAVKQYNGGEIPRTT 498
Query: 126 DEVKFVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERTNFPQG 185
V+ VL +P E R + + I V ++ ++ + + ++ +N P G
Sbjct: 499 SGVERVLAQMPTEQRQRYYNDGRAH--ITVASPQDMTTGQVLSFLENSQESLDYSNPPPG 556
Query: 186 VEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPLIFGVV 245
V +TG I + N N T + + V +L +Y+ ++ + PLVP++F +
Sbjct: 557 VTAEVTGTSSIAVPSIIDQINSRNTTTGLGILFVFALLGLYYRDLVKAVAPLVPMVFVIG 616
Query: 246 MTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERG-KGKSLEEAAEEAIAE 304
+M L IP+ ++GAM +G+G +Y + V RYYEE+ G +A E A +
Sbjct: 617 WQNIYMLALDIPVSPLGASLGAMTVGIGAEYTIIVMERYYEEKQHNGYGRLDAVEIAASR 676
Query: 305 TGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVT--PALAILE 360
GKA+ + +TT+ GF AL +S P L L +G+ L A + T P L +L+
Sbjct: 677 VGKAITVSGMTTVFGFSALILSPFPVLSSFGF-LTVGVIFLTLIASLATLPPTLVVLD 733
>pir||D70131 conserved hypothetical integral membrane protein BB0252 - Lyme
disease spirochete >gi|2688146|gb|AAB91494.1| (AE001135)
conserved hypothetical integral membrane protein
[Borrelia burgdorferi]
Length = 767
Score = 145 bits (363), Expect = 1e-33
Identities = 165/768 (21%), Positives = 345/768 (44%), Gaps = 73/768 (9%)
Query: 13 RHSLAVVTMFLLILSAYG--ITQLRFETDLSKQLPEDLEAVKSYFTLQNEFGGSGSALIY 70
R+ + T+F+LI G + L+F+ ++ K +P+ E + S S L
Sbjct: 9 RYKGIIFTIFILITIFLGFFLKNLKFDANILKLIPKTKETESLI-----DIDKSNSLLST 63
Query: 71 VKI-KNNDNVVDIRDPKIIEAMYSLEQRLRE--KEYVTDTFSIADLMVQILGRLPKNMDE 127
+ I ++ N+ + ++ + I ++ S ++ + VT FS + + K+++E
Sbjct: 64 IVIFQDKKNIFNKKNFETINSVISEITKILKVSPNAVTSIFSYFPQFKKEI-YTDKDIEE 122
Query: 128 VKFVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQ----KALVRVYNDIEREIERTNFP 183
+K + P L G+ + I + + E +Q + L +++E+ I++
Sbjct: 123 IKSKIKSTPFVKNTFL--GNSENLIYFIIIPSESDQINFSRNLKTELDEMEKTIKKYE-T 179
Query: 184 QGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPLIFG 243
+++ LTGDL + KIL + D ++ +V++ L K+ I L+P+ +
Sbjct: 180 DDLKLYLTGDLIVREKILNYMVEDFKILGPLATFVVIISLYLIIKNLIGALIPIFIALLS 239
Query: 244 VVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIA 303
++ T G GL+ P+ + T++ ++I +G VH+ N ++ K + +E+ + I
Sbjct: 240 LIWTFGIKGLVQSPITVPETSMIVLLISIGCANAVHIINEIFKLIKKEQLSKESIKATIK 299
Query: 304 ETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILEEEF 363
+ +L + TT GFL+L+ S + + K + + + +G+ ++ + ++ V P + L
Sbjct: 300 KLKTPILLTSFTTAFGFLSLTTSSINAYKTMGIFMSIGVIISMIISLTVLPGIITLIPFA 359
Query: 364 REKVMKKKEIIAIGGGKSKISF------IFSMLGKAIKRSPWTALLIALIISGVSLYGAS 417
++K +K++ + +KISF + + + K+I + +T+ ++ LII G+S G
Sbjct: 360 KKKSFEKEKENKL----NKISFLERLAKLNTQITKSILKRKYTSSIMVLIILGISFVGLL 415
Query: 418 KITTEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTILI----------KADDVRDPTLV 467
KI + + L+ ++ E GG I I KA + D L+
Sbjct: 416 KIEINFDEKDYFKESTSVKKTLNLMQKEMGGISIFKIEIEGRPGEFKNAKAMQILD--LI 473
Query: 468 RDILRFEREIKADSYINNVFETQSIADVVIQKYGY-IPQDK---EKISEAIEGSS----- 518
D L S IN + + + Y +P++K K+ I+ S
Sbjct: 474 TDKLDAFSAKTQSSSINGILKFTNFKIKKESPLEYKLPENKIILNKLINLIDKSDWTKDN 533
Query: 519 ---LVSSDYSM--TIIKLKGNFM-GVTQSE---FNRIMEYFERAIQRADFPPGVKVELAG 569
++ D+S+ I++++ N G+ + E N I EY + K +G
Sbjct: 534 KRMYINDDWSLISIIVRIEDNSTEGIKKFEKYAINTINEYMKNN----------KYHFSG 583
Query: 570 ESYLNYVLNDLVNEE-LGKISTIGTLIVVMVVFAIFRRPTVSIAMIMPMFLGALWTIGYM 628
+ +V E+ + I+T+G++ ++++ F F+ I + +P+ M
Sbjct: 584 VYDKVLIAKTMVKEQVINIITTLGSITLLLMFF--FKSIKTGIIIAIPVAWSVFLNFAVM 641
Query: 629 GLAGIPFSQTLAGVVSMIVGLGVDYGMHITHRFL--EELNEGNKTPIITALESVGPGIFV 686
L GI + A + S+ +G+GVDY +H + F+ + N+ KT ++ ++ +V GIF
Sbjct: 642 RLFGITLNPATATIASVSMGVGVDYSIHFFNTFILQYQKNQIYKTALLESIPNVFNGIFA 701
Query: 687 GALTTAGGFLALLSAQLTAIHDFGRVLAVGIFASMFAAYLVTPAILQL 734
+++ GFL L + I G ++A + + A+ + P ++ L
Sbjct: 702 NSISVGIGFLTLTFSSYKIISTLGAIIAFTMLTTSLASLTLLPLLIYL 749
>pir||E72272 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981852|gb|AAD36368.1|AE001784_10 (AE001784)
conserved hypothetical protein [Thermotoga maritima]
Length = 694
Score = 141 bits (352), Expect = 3e-32
Identities = 166/755 (21%), Positives = 329/755 (42%), Gaps = 86/755 (11%)
Query: 1 MLRKIARVIVIYRHSLAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNE 60
M K + R + + + + IL+ +G+ +L F T+ S +P+ + Y +
Sbjct: 1 MFEKYTSFVFKNRKRIFALVLVINILALFGLFRLHFTTEFSILMPQKSHQKEIYDRMNTI 60
Query: 61 FGGSGSALIYVKIKNNDNVVDIRDPKIIEAMYSLEQRLREKEYVT---DTFSIADLMVQI 117
F + VK+ N D + K+ E L K +T + F + +V+
Sbjct: 61 FKSGEQLAVMVKM-NTDPLSREGLNKVFEIKERLSSIEGVKTVITPVPEKFPVGFRLVET 119
Query: 118 LGRLPKNMDE-------VKFVLNMLPPEARNGLISGDYSSTIIIV--NLNREKNQKALVR 168
G K ++ VK +LN+ + G Y+ +I+ ++ EK +K L
Sbjct: 120 KGMAEKEYEDFLSYVQSVKDLLNVKKTD------DGYYALFMILPEESVPPEKIEKVL-- 171
Query: 169 VYNDIEREIERTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYK 228
+D E + T + + I +L M+ + VVL+L F
Sbjct: 172 --SDYEHYLSGTQYLEDQ---------IFRYLLFMI-------FTLPPFAVVLLLNVFRV 213
Query: 229 SPIRM---LVPLVPLIFGVVMTLGF-MGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRY 284
R + L+P F + TLG MG G L I T V I MG G+H + +
Sbjct: 214 QLGRFKYAIFSLIPAGFAALWTLGIVMGWFGQDLSIITFLVPIFTIVMGSADGLHFVSHF 273
Query: 285 YEERGKGKSLEEAAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGL 344
E + +G++ A + + G+A++ LTT+AGFL+ S+K++ V +G+GL
Sbjct: 274 LERKREGETTFNAVKNTLESVGRAMILTTLTTMAGFLSFLTLNSESMKQMGVLASIGIGL 333
Query: 345 AALNAVIVTPALAILEEEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLI 404
A ++ IV P + E+ K+K S +F + K KR AL++
Sbjct: 334 AGVSTWIVLPVILSRVEKVEP--------------KNKESGVFRVFQKLSKR----ALVV 375
Query: 405 ALIISGVSLYGASKITTEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDP 464
++ + L G + ++ + K+ + + + I FG V IL +++++ DP
Sbjct: 376 TIVSVLIFLPGLFFLKADLNILKLYKSYTRVRKNVEKIEEVFGRALPVYILFESENLFDP 435
Query: 465 TLVRDILRFEREIKADSYINNVFETQSIADVVIQKYGYIPQDK---EKISEAIEGSSLVS 521
+ + +L E ++K + F+ S+ D++ + + ++K + ++ A+ L+
Sbjct: 436 SFAQKVLSMEEDLKKEG-----FDAFSMYDIISKLNERLFKEKGYPKILARALILKRLLP 490
Query: 522 SDYSMTIIKLKGNFMGVTQSEFNR-IMEYFERAIQRADFPPGVKVELAGESYLNYVLND- 579
+Y+ ++ V ++ +R I+ E +++ F ++ G Y+ +ND
Sbjct: 491 DEYTENLVSGNTGRAFVFLNDLDREILVKVENVVEKHGF------QVTGIPYIIKEMNDS 544
Query: 580 LVNEELGKISTIGTLIVVMVVFAIFRRPTVSIA-MIMPMFLGALWTIGYMGLAGIPFSQT 638
+V ++L +S + +V ++ +F+R + A I+P+ + + G+MGL+GIP +
Sbjct: 545 IVPQQL--LSVFLAISMVFLLLVLFQRSFLYPAKAIVPVGISLVSLFGFMGLSGIPLNLI 602
Query: 639 LAGVVSMIVGLGVDYGMHITHRFLEELNEGNKTPIITALESVGPGIFVGALTTAGGFLAL 698
A + +++G+G+DY +H+T F + KT I + + A + G AL
Sbjct: 603 TANMAGIVIGVGIDYAIHVTELF-RYYGDIEKTVRIASTP-----VLANAFGLSIGLSAL 656
Query: 699 LSAQLTAIHDFGRVLAVGIFASMFAAYLVTPAILQ 733
+ + T ++ V + S F + ++ P +L+
Sbjct: 657 ILSPFTFHTYLVAIMWVTMTVSSFMSLVILPKLLE 691
>sp|O54101|MMLB_STRCO PUTATIVE MEMBRANE PROTEIN SC10A5.10C >gi|7480675|pir||T34577
probable export protein - Streptomyces coelicolor
>gi|2815318|emb|CAA16442.1| (AL021529) SC10A5.10c,
probable export protein, len: 847 aa; si milar to eg. S.
coelicolor actinorhodin antibiotic export p rotein
TR:Q53902 (EMBL:M64683) ORF2 (ACTII) (711 aa), fasta
scores; opt: 705 z-score: 1126.2 E(): 0, 35.4% identity
in 746 aa ov>
Length = 847
Score = 115 bits (285), Expect = 2e-24
Identities = 152/632 (24%), Positives = 259/632 (40%), Gaps = 69/632 (10%)
Query: 128 VKFVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERTNFPQGVE 187
V V + P+A L+S D + ++IV + + ++ +++ P +
Sbjct: 111 VSVVSTVTAPDAAAELVSQDRGAQLVIVPMEGSPSDESFQNAVDEVRALASDRAGP--AD 168
Query: 188 VVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPLIFGVVM- 246
V +TG GI +++ + + ++V++ILL Y+SP+ LVPL L GV M
Sbjct: 169 VAVTGPAGIATDTVKVFSGGDKVLLLATVVLVLIILLAIYRSPLMALVPL--LAVGVAMR 226
Query: 247 ---TLGFMGLLGIPLDIATTTVGAMII---GMGIDYGVHVTNRYYEERGKGKSLEEAAEE 300
TLG + + +++ T M + G+G DY + +T RY E A +
Sbjct: 227 VAETLGAILADAGVITVSSQTASIMTVLLFGVGTDYALIITARYRETLLDEPDRARAMQA 286
Query: 301 AIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAIL- 359
A+ T +++L +A T + AL +++ P+L L +G+ + AL A PAL +L
Sbjct: 287 AVRRTAESVLASASTIVLAMFALLVAVSPALHGFGPYLALGVAVMALVAFTFIPALVLLL 346
Query: 360 -EEEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSP---WTALLIALIISGVSLYG 415
F + K + G G I+ + + R+P +A++ L++ L G
Sbjct: 347 GRSVFWPGGVDKAAERSRGAG------IWHRIAALVARAPVKVASAVIALLVVLSAGLLG 400
Query: 416 ASKITTEVRLEKMIPTDLPEIQALSDIRSEFGGQD---EVTILIKADDVRDPTLVRDILR 472
+ + + T+ Q L IR EFG + ++ D++R DI
Sbjct: 401 YQESFNTLSGFR-AATESEHGQHL--IREEFGPGEIAPSTVVVHSQDNLRSSPAPADIA- 456
Query: 473 FEREIKADSYINNVFETQSIADVVIQKYGYIPQDKEKISEAIEGSSLVSSDYSMTIIKLK 532
+ + + +AD + K G K + I L YS +
Sbjct: 457 --------TALTDADHVSRVADPRMGKDG-----KTVFYDVI----LDLDPYSSKALDAI 499
Query: 533 GNFMGVTQSEFNRIMEYFERAIQRADFPPGVKVELAGESYLNYVLNDLVNEELGKISTIG 592
G TQS A Q A V + GE+ N + ++ + I +
Sbjct: 500 GPLKQATQS-----------AAQAAGVQDAT-VLIGGETAQNADIRSALDRDTTLIVLLV 547
Query: 593 TLIVVMVVFAIFR---RPTVSIAMIMPMFLGAL-----WTIGYMGLAGIPFSQTLAGVVS 644
IV +V+ + R P +A ++ FL L +T+ +G GI ++ A +
Sbjct: 548 LAIVTVVLVLLLRSLLAPLYLVATLLLSFLATLGATTFFTVTVLGDDGIG-NRVTAYIFV 606
Query: 645 MIVGLGVDYGMHITHRFLEELNEGNKTPIIT-ALESVGPGIFVGALTTAGGFLALLSAQL 703
+V LGVDY + I RF +EL IT AL G I L A F L++ +
Sbjct: 607 FLVALGVDYNIFIMSRFKQELRTQPPAKAITAALTRTGGVISSAGLILAATFAVLMTQPI 666
Query: 704 TAIHDFGRVLAVGIFASMFAAY-LVTPAILQL 734
+ FG +A GI F L+ PAI++L
Sbjct: 667 RELFQFGFAMACGILLDTFLIRPLLVPAIVRL 698
>pir||D72329 hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981348|gb|AAD35899.1|AE001749_2 (AE001749)
hypothetical protein [Thermotoga maritima]
Length = 674
Score = 102 bits (253), Expect = 1e-20
Identities = 85/356 (23%), Positives = 170/356 (46%), Gaps = 43/356 (12%)
Query: 3 RKIARVIVIYRHSLAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNEFG 62
RKIA +++ VV + + LS + + +++ +D+ D E K+Y + +F
Sbjct: 353 RKIALIVL-------VVFLVMAALSPFLLKRVQVGSDMVSYFERDSELRKAYDLIVKKFN 405
Query: 63 GSGSALIYVKIKNNDNVVDIRDPKIIEAMYSLEQRLREKEYVTDTFSIADLMVQILGRLP 122
IY+ ++ N V D KI++ L +++ + EYV+ D+ V I+ L
Sbjct: 406 TREP--IYLVLEKNVPFVGT-DSKILK---ELIEKIEKSEYVSSVVFPVDIPVPIMYTLS 459
Query: 123 KNMDEVKFVLNMLPPEARNGLISGDYSSTIIIVNLNRE--KNQKALVRVYNDIEREIERT 180
+ +K + GD + +IVNL E ++ K +V + N++ E +
Sbjct: 460 RTNPFLKTFV-------------GDRNRIRLIVNLTPEGYEHVKKVVDLINEVVSETGWS 506
Query: 181 NFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPL 240
++ G V++ D+ E + +++ ++ I++ ++ ++ P+ L ++P+
Sbjct: 507 HYVAG-SVLIWNDIN------ESIMRSQIQSIVLASILIFAMVFIIFRRPLTTLSVMIPI 559
Query: 241 IFGVVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEE 300
F V FM L GI LD++T+ +++G+ IDY +H+ + E R + L
Sbjct: 560 AFTTVFNFLFMALFGISLDVSTSITSGILMGLVIDYSIHIASE--ERRLRDPYL------ 611
Query: 301 AIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPAL 356
+ G ++L AL I+GF L S L K +S+ +++G+G+ A+ +IV P +
Sbjct: 612 VVKNVGPSVLTNALGLISGFAVLLFSELALFKNISLLMMLGIGVGAIFTLIVQPMI 667
>gb|AAD44231.1|AF143772_37 (AF143772) TmtpB [Mycobacterium avium]
Length = 963
Score = 101 bits (249), Expect = 3e-20
Identities = 94/375 (25%), Positives = 156/375 (41%), Gaps = 33/375 (8%)
Query: 106 DTFSIADLMVQILGRLPKNMDEVKFVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQKA 165
D + D ++++L K++ V+ P R S D + + VNLN A
Sbjct: 96 DAHTYYDRLIRLLENDHKHVQHVQNFWG--DPLTRGAAQSQDGKAAYVQVNLNGNAGAAA 153
Query: 166 LVRVYNDIEREIERTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLY 225
I + ++ + P G++V +TG I + Q + S I++ + LL
Sbjct: 154 GDESVAAIRKLVQEASPPPGLKVYVTGPAPIVADMNIAGQKTVMLVTLASLIVIFVTLLL 213
Query: 226 FYKSPIRMLVPLV------PLIFGVVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVH 279
Y+S I +++ L+ + G+V LG +G++G+ A + A +I G DYG+
Sbjct: 214 VYRSVITVILLLLIVGLELQIARGMVALLGHLGVVGLTT-FAVNLLVAAVIATGTDYGIF 272
Query: 280 VTNRYYEERGKGKSLEEAAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLV 339
RY E R G+S EEA K +L + LT L LS + LP + L + +
Sbjct: 273 FVGRYQEARQAGESREEAFYTTFNGVAKVVLASGLTIAGAVLCLSFTRLPYFQPLGIPVA 332
Query: 340 MGLGLAALNAVIVTPALAILEEEF-----REKVMKKKEIIAIGGGKSKISFIFSMLGKAI 394
+G+ +A L A+ + PAL F R V ++ + +G AI
Sbjct: 333 VGISIAVLVALTLGPALLAAGARFGLFEPRRAVSARR---------------WRRIGTAI 377
Query: 395 KRSPWTALLIALIISGVSLYGASKITTEVRLEKMIPTDLPEIQALSDIRSEFGGQ----D 450
R P L+ L +S V L +K IP +P + F GQ
Sbjct: 378 VRWPAPILIATLAVSLVGLLALPNYRPSYDDQKFIPDSIPANVGFAAAARHFPGQRMQMP 437
Query: 451 EVTILIKADDVRDPT 465
E+ ++ D+R+PT
Sbjct: 438 EILLVETDHDLRNPT 452
>sp|O53784|MML5_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL5 >gi|7478343|pir||E70826 probable
membrane protein - Mycobacterium tuberculosis (strain
H37RV) >gi|2909649|emb|CAA17459.1| (AL021943) mmpL5
[Mycobacterium tuberculosis]
Length = 964
Score = 101 bits (248), Expect = 4e-20
Identities = 90/386 (23%), Positives = 160/386 (41%), Gaps = 21/386 (5%)
Query: 116 QILGRLPKNMDEVKFVLNML-PPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIE 174
Q++GRL + V+ + + P G S D + + V L + + ++
Sbjct: 111 QMIGRLQADTTHVQSLQDFWGDPLTATGAQSSDGKAAYVQVKLAGNQGESLANESVEAVK 170
Query: 175 REIERTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRML 234
+ER P GV+V +TG + + + A++ +++++LL Y+S I
Sbjct: 171 TIVERLAPPPGVKVYVTGSAALVADQQQAGDRSLQVIEAVTFTVIIVMLLLVYRSIITSA 230
Query: 235 VPLVPLIFGVVMTLGFMGLLGIPLDI-----ATTTVGAMIIGMGIDYGVHVTNRYYEERG 289
+ L ++ G++ T G + LG I AT + + I DY + + RY E RG
Sbjct: 231 IMLTMVVLGLLATRGGVAFLGFHRIIGLSTFATNLLVVLAIAAATDYAIFLIGRYQEARG 290
Query: 290 KGKSLEEAAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNA 349
G+ E A T +LG+ LT LS + LP + L V L +G+ + A
Sbjct: 291 LGQDRESAYYTMFGGTAHVVLGSGLTIAGATFCLSFTRLPYFQTLGVPLAIGMVIVVAAA 350
Query: 350 VIVTPALAILEEEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIIS 409
+ + PA+ + F K+++ K + + G + +G AI R P L+ A+ ++
Sbjct: 351 LTLGPAIIAVTSRF-GKLLEPKRMARVRGWRK--------VGAAIVRWPGPILVGAVALA 401
Query: 410 GVSLYGASKITTEVRLEKMIPTDLPEIQALSDIRSEFGG---QDEVTILIKADDVRDPTL 466
V L T +P DLP + + F EV ++ D+R+
Sbjct: 402 LVGLLTLPGYRTNYNDRNYLPADLPANEGYAAAERHFSQARMNPEVLMVESDHDMRNSA- 460
Query: 467 VRDILRFEREIKADSYINNVFETQSI 492
D L + KA + + Q+I
Sbjct: 461 --DFLVINKIAKAIFAVEGISRVQAI 484
>emb|CAB90894.1| (AL355753) putative integral membrane protein. [Streptomyces
coelicolor A3(2)]
Length = 739
Score = 97.1 bits (238), Expect = 6e-19
Identities = 125/560 (22%), Positives = 229/560 (40%), Gaps = 69/560 (12%)
Query: 205 QNDMNRTMAISGI-IVVLILLYFYKSPIRMLVPLVPLIFGVVMTLGFMGLLGIPLDI-AT 262
+ +M T + GI + ++LL + S + +PL+ I GV + + +G LG L++ AT
Sbjct: 171 EQEMGGTAELIGIGVAAIVLLLTFGSLVAAGMPLLSAIIGVGIGISAIGALGSTLELSAT 230
Query: 263 TTVGAMIIGMG--IDYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKALLGAALTTIAGF 320
T+ AM+IG+ IDY + + +RY E +G++ EEAA A+ G A++ A LT +
Sbjct: 231 TSTLAMMIGLAVAIDYALFIVSRYRAEISEGRAPEEAAGRAVGTAGSAVVFAGLTVVVAL 290
Query: 321 LALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAIL--EEEFREKVMKKKEIIAIGG 378
L+I +P L ++ ++ +G+A L A+ +TPAL + K K
Sbjct: 291 AGLAIVNIPILTKMGLAAAGTVGIAVLIALTLTPALLGFAGKRALSRKDRKAPAGARAAS 350
Query: 379 GKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYGASKITTEVRLEKMIPTDLPEIQA 438
GK K+ + + ++R P T LL A++ GV A+ + + E D + +A
Sbjct: 351 GKPKLG---TRWARFVQRRPVTVLLTAVLGLGVIAVPAAGMELGLPDEGSSAPDTTQRKA 407
Query: 439 LSDIRSEFGG--QDEVTILIKADDVRDPTLVRDILRFEREIKADSYINNVFETQSIADVV 496
+ FG + + + A DP D + I + E ++
Sbjct: 408 YDMLSESFGAGFNGPLMVTVDARGADDPKAAADTV--------GEKITGLGEAAAVTPAN 459
Query: 497 IQKYGYIPQDKEKISEAIEGSSLVSSDYSMTIIKLKGNFMGVTQSEFNRIMEYFERAIQR 556
+ EG + V +T++ G T+S + I R
Sbjct: 460 FNE---------------EGDTAV-----LTVMPKTGPSDVATESLVHDIRSL--SGDIR 497
Query: 557 ADFPPGVKVELAGESYLNY--VLNDLVNEELGKISTIGTLIVVMVVFAIF--RRPTVSIA 612
AD + V A +++ L+D + L + + L++++V ++ + +
Sbjct: 498 ADTGAAMLVTGATAMTIDFSQTLDDALIPYLALVVGLAFLLLMLVFRSVLVPLKAALGFL 557
Query: 613 MIMPMFLGALWTIGYMGLAGIPFSQTLAG---------VVSMIVGLGVDYGMHITHRFLE 663
+ + LGA+ + G F G ++ ++ GL +DY + + R E
Sbjct: 558 LSVAAALGAVVAVFQWGWLADVFGVDQPGPIMSMMPIFMIGVVFGLAMDYEVFLVTRMRE 617
Query: 664 ELNEGNKTPIITALESVGPGIFVGALTTAGGFLALLSA---------QLTAIHDFGRVLA 714
G +A ESV G G A + ++S + + FG +A
Sbjct: 618 AYVHGE-----SAAESVTTGFTHGGRVVAAAAIIMISVFSGFILENDAMIKMMGFGLAIA 672
Query: 715 VGIFASMFAAYLVTPAILQL 734
V +F + + PA+L L
Sbjct: 673 V-LFDAFVVRMAIVPAVLAL 691
>pir||B81282 probable integral membrane protein Cj1373 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968807|emb|CAB73800.1| (AL139078) putative integral
membrane protein [Campylobacter jejuni]
Length = 823
Score = 94.4 bits (231), Expect = 4e-18
Identities = 151/832 (18%), Positives = 335/832 (40%), Gaps = 116/832 (13%)
Query: 1 MLRKIARVIVIYRHSLAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNE 60
M K+ + + S T+F+ + ++ +L + L ED +K++ +
Sbjct: 1 MFAKLLKFFISRPKSTFFGTLFICLFLSFFAFKLSVDASAESLLLEDDADLKTFREISKH 60
Query: 61 FGGSGSALIYVKIKN-----NDNVV-------DIRDPKIIEAMYSL-EQRLREKEYVTDT 107
+ L+ K + N+N+ ++ ++E ++S+ L + TD
Sbjct: 61 YKSDNFLLLAFKPYDEKPFSNENLAKLKKLHEELEKAPLVERVFSIINAPLLQSSQNTD- 119
Query: 108 FSIADLMVQILGRLPKNMDEVKFVLNML-PPEARNGLISGDYSSTIIIVNLN-------- 158
+ +L+ I ++++ K +L P +N +IS D T +I+ L
Sbjct: 120 --LKELLKNIPNIESQDINRTKAQNEILNSPFYKNNIISKDGKVTGLIIYLKPDTVYNNL 177
Query: 159 ----------REKNQKAL-VRVYNDIEREIERT----------NFPQGVEVVLTGDLG-I 196
+EK+Q L ++ + D ++ I + N+ + + + G + I
Sbjct: 178 IEKRDLATDEKEKDQIRLAIKEHQDKQKVITKQSLDTIKSIVRNYEKNKDTLYLGGVSMI 237
Query: 197 TYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPLIFGVVMTLGFMGLLGI 256
++ +++D+ ++ L L YF++S + +PL + G LL
Sbjct: 238 ADDMIAYIKSDLVLYGVSLVFLLGLALYYFFRSWRFVFLPLFICFISLSAASGVFALLNF 297
Query: 257 PLDIATTTVGAMIIGMGIDYGVHVTNRYYE--ERGKGKSLEEAAEEAIAETGKALLGAAL 314
+ + ++ A+++ + + VH+ + E + +E E + L A +
Sbjct: 298 QITVISSNYVALVLIITLSVVVHLITHFIESTQNHPKAKVERIVLETLLAKANPSLYAIV 357
Query: 315 TTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAIL-------EEEFREKV 367
TT+ GF +L +S + + +L + + +G+GLA + + + ++ +L ++EF+ +
Sbjct: 358 TTMIGFFSLILSNIEPIIKLGIMMSIGIGLALIFSYLFLASILVLLKPKNYHKKEFKFNL 417
Query: 368 MKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYGASKITTEVRLEK 427
+ A+ K ++ + S+L A+++ALI G SK+ E
Sbjct: 418 LAFCAKTALDPKKRRMIYEISVL----------AIILALI-------GISKLRVENSFVN 460
Query: 428 MIPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDPTLVRDIL-RFEREIKADSYINNV 486
+ L I GG + ++I+ + ++ D L FE E + +
Sbjct: 461 YFKDGSEIKKGLLVIDKNLGGTLPLEVIIRFPNNKNDQNASDTLDSFESEFE-NLATQET 519
Query: 487 FETQSIADVVIQKYGYIPQDKEKISEAIEGSSLVS-----------SDYSMTIIK----- 530
+ S + +K ++KE + + +SL++ D+++ +
Sbjct: 520 YWFDSKKTRIAKKVHEFLENKEFVGSVLSLNSLLTLGKNINDGKELDDFALAFLNENLPA 579
Query: 531 -----LKGNFMGVTQSEFNRIMEYFER--AIQRADF-------------PPGVKVELAGE 570
L F+ + +E M + ++R +F GV+V++ G
Sbjct: 580 KFKQDLLSPFVSIENNELRFSMRIVDSDPNLRRNEFLIDLKKQLNELVKNDGVEVQITGI 639
Query: 571 SYL-NYVLNDLVNEELGKISTIGTLIVVMVVFAI-FRRPTVSIAMIMPMFLGALWTIGYM 628
L N +L L + + + I ++ + ++F I FR S+A I+ + M
Sbjct: 640 MVLYNNMLQSLFSSQFDTL--IFVILAIFILFIIVFRDLKFSVAAILVNVIPLSVVFALM 697
Query: 629 GLAGIPFSQTLAGVVSMIVGLGVDYGMHITHRFLEEL-NEGNKTPIITALESVGPGIFVG 687
GL GIP + ++ +G+GVD +H +RF EE+ N+ + I+ + S+G ++
Sbjct: 698 GLLGIPLDMMSITIAAIAIGIGVDDAIHYIYRFREEIKNKSLEEAIMISHLSIGSALYYT 757
Query: 688 ALTTAGGFLALLSAQLTAIHDFGRVLAVGIFASMFAAYLVTPAILQLEFGRK 739
++ GF ++S+ FG + + + + + P+ L + +K
Sbjct: 758 TISIVLGFSVMMSSNFIPTIYFGILTVFVMILLLSGSLFLLPSFLITIYSKK 809
Score = 92.4 bits (226), Expect = 2e-17
Identities = 87/362 (24%), Positives = 160/362 (44%), Gaps = 58/362 (16%)
Query: 13 RHSLAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNEFGGSGSALIYVK 72
R + +++ +IL+ GI++LR E + E K + GG+ + ++
Sbjct: 431 RRMIYEISVLAIILALIGISKLRVENSFVNYFKDGSEIKKGLLVIDKNLGGTLPLEVIIR 490
Query: 73 IKNNDNVVDIRDP---------------------KIIEAMYSLEQRLREKEYVTDTFSIA 111
NN N + D K + + L KE+V S+
Sbjct: 491 FPNNKNDQNASDTLDSFESEFENLATQETYWFDSKKTRIAKKVHEFLENKEFVGSVLSLN 550
Query: 112 DLMVQILGRLPKNMDEVK--------FVLNMLPPEARNGLISG---------DYSSTIII 154
L+ L KN+++ K F+ LP + + L+S +S I+
Sbjct: 551 SLLT-----LGKNINDGKELDDFALAFLNENLPAKFKQDLLSPFVSIENNELRFSMRIVD 605
Query: 155 VNLNREKNQKALVRVYNDIEREIERTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAI 214
+ N +N+ + D+++++ GVEV +TG + + +L+ L + T+
Sbjct: 606 SDPNLRRNEFLI-----DLKKQLNELVKNDGVEVQITGIMVLYNNMLQSLFSSQFDTLIF 660
Query: 215 SGIIVVLILLYFYK----SPIRMLVPLVPLIFGVVMTLGFMGLLGIPLDIATTTVGAMII 270
+ + ++ + ++ S +LV ++PL VV L MGLLGIPLD+ + T+ A+ I
Sbjct: 661 VILAIFILFIIVFRDLKFSVAAILVNVIPL--SVVFAL--MGLLGIPLDMMSITIAAIAI 716
Query: 271 GMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKALLGAALTTIAGF-LALSISILP 329
G+G+D +H R+ EE K KSLEEA + G AL ++ + GF + +S + +P
Sbjct: 717 GIGVDDAIHYIYRFREEI-KNKSLEEAIMISHLSIGSALYYTTISIVLGFSVMMSSNFIP 775
Query: 330 SL 331
++
Sbjct: 776 TI 777
>emb|CAB89762.1| (AL354616) putative integral membrane protein. [Streptomyces
coelicolor A3(2)]
Length = 748
Score = 94.0 bits (230), Expect = 5e-18
Identities = 116/549 (21%), Positives = 219/549 (39%), Gaps = 57/549 (10%)
Query: 213 AISGIIVVLILLYFYKSPIRMLVPLVPLIFGVVMTLGFMGLLG--IPLDIATTTVGAMI- 269
AI + ++LL + S +PL+ + GV +++ + LG + L + T T+ +M+
Sbjct: 181 AIGIALAAVVLLITFGSLAAAGLPLLTAVIGVGVSMCAILALGSTLGLTMTTGTLASMLG 240
Query: 270 IGMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKALLGAALTTIAGFLALSISILP 329
+ +GIDY + V +RY EER G + EAA A+ G A++ A LT I + L++ +P
Sbjct: 241 LAVGIDYALFVVSRYREERANGHAPREAAGLAVGTAGSAVVFAGLTVIIALVGLTVIGVP 300
Query: 330 SLKRLSVSLVMGLGLAALNAVIVTPALAIL--EEEFREKVMKKKEIIAIGGGKSKISFIF 387
L ++ + + +A L A+ + PAL + +V K +E G S
Sbjct: 301 MLTKMGLCAAGAVAIAVLVALTLVPALLGMWPNAVLSRRVRKFREADKRDGNAKHHSETP 360
Query: 388 SMLG----KAIKRSPWTALLIALIISGVSLYGASKITTEVRLEKMIPTDLPEIQALSDIR 443
G + + R P LL+ + + GV A+ + + ++ PT E +A +
Sbjct: 361 DNGGTRWARFVMRRPVAVLLLGVAVLGVLALPATHLEMGMPGDEAKPTSTTERRAYDALA 420
Query: 444 SEFGGQDEVTILIKADDVRDPTLVRDILRFEREIKADSYINNVFETQSIADVVIQKYGYI 503
FG + + A DV+D T + + A + + +T + V
Sbjct: 421 DGFGAGFNGPLTVVA-DVKDAT--------DPQAAAATMAEQIKDTDGVVSVT------P 465
Query: 504 PQDKEKISEAIEGSSLVSSDYSMTIIKLKGNFMGVTQSEFNRIMEYFERAIQRADFPPGV 563
PQ E G + + S T G I++ + G
Sbjct: 466 PQFNE------AGDTALFSAVPAT---------GPNTEATKEIVQTIRAERPGLEADTGA 510
Query: 564 KVELAGESYLNYVLNDLVNEELGKISTIGTLIVVMVVFAIFRRPTVSIAMIMPMFLGALW 623
E+ G + +N + + + L + L+ ++++ +FR V + + L L
Sbjct: 511 TFEVTGSTAMNIDVAQALQDALVPYLAVIVLLSLLLLLIVFRSILVPVKAALGFLLSVLA 570
Query: 624 TIGYM----------GLAGIPFSQTLAG-----VVSMIVGLGVDYGMHITHRFLEELNEG 668
++G + GL G+ + + +V ++ GL +DY + + R E G
Sbjct: 571 SLGTVVAVFQWGWGAGLLGVEQTGPIMSLMPIFLVGIVFGLAMDYEVFLVARMREAYVHG 630
Query: 669 NK--TPIITALESVGPGIFVGALTTAGGFLALLSAQLTAIHDFGRVLAVGIFASMFAAYL 726
+ ++T + A+ F + + + I G LAV + F +
Sbjct: 631 ERPGQAVVTGFRHSARVVAAAAVIMMAVFSGFIGSGESMIKTIGFGLAVAVLFDAFVVRM 690
Query: 727 -VTPAILQL 734
+ PA+L L
Sbjct: 691 ALVPAVLAL 699
>emb|CAB89749.1| (AL354616) putative membrane protein [Streptomyces coelicolor
A3(2)]
Length = 716
Score = 92.1 bits (225), Expect = 2e-17
Identities = 125/578 (21%), Positives = 236/578 (40%), Gaps = 73/578 (12%)
Query: 183 PQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPLIF 242
P G+E+ +TG I + + + + + +V L+L+ Y+SP+ ++PLV +
Sbjct: 162 PSGLELEVTGPGAIDGDMDAVFDGIDEQVLLTTIAVVTLLLILTYRSPVLWIIPLVAVGA 221
Query: 243 GVVMTLGFMGLL----GIPL-DIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEA 297
+ ++G + LL GI + D + + ++ G+G DY + + RY E +++ A
Sbjct: 222 AALTSMGTVYLLVKGFGIVVNDQNSALLTILVFGVGTDYALLLIARYREALHHQENVRGA 281
Query: 298 AEEAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALA 357
A+ A++ +A T ++G L L ++ L S L G+ A + + + PA+
Sbjct: 282 MVHALRGAAPAIVASAATVVSGLLCLLVADLNSTSGLGPIGAAGILCALVAMLTLFPAVL 341
Query: 358 IL--EEEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYG 415
++ F V + + G ++ LG AI R W A L + + GV G
Sbjct: 342 VVLGRRIFWPAVPRFSTAVEEKPG------LWGRLGTAINRRRWVATLGSFGVLGVLALG 395
Query: 416 ASKITTEVRLEKM---IPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDPTLVRDILR 472
+ TT +R + +P + L + E GGQ P V
Sbjct: 396 LAGNTTALREQDQFLSVPESVTGFTVLREHFPELGGQ--------------PLTV----- 436
Query: 473 FEREIKADSYINNVFETQSIADVVIQKYGYIPQDKEKISEAIEGSSLVSSDYSMTIIKLK 532
F R + + ++ V +T+ +A V + E + G + +S +
Sbjct: 437 FTRPAQQEKVLDVVEDTRGVALAVPE-------------ETVGGWANIS---------VF 474
Query: 533 GNFMGVTQSEFNRIMEYFERAIQRADFPPGVKVELAGESYLNYVLNDLVNEELGKISTIG 592
T +E++ I +R G + + G S N + ++ K+
Sbjct: 475 PKDAPDTAAEYDTI----KRVRTAVHMVSGAEAIVGGPSAEN-LDTEVTTRRDEKLVIPL 529
Query: 593 TLIVVMVVFAIFRR----PTVSIAMIMPMFLGALWTIGY-----MGLAGIPFSQTLAGVV 643
L+VV+++ + R P V +A ++ F A + +G G+ +S L +
Sbjct: 530 VLVVVLIILGLLLRAVLAPLVLMATVVVSFAAAFGGSVFVFDTILGFKGVDYSVPLLAFL 589
Query: 644 SMIVGLGVDYGMHITHRFLEE-LNEGNKTPIITALESVGPGIFVGALTTAGGFLALLSAQ 702
+V LGVDY + + R +E + G + ++ AL + G I L A F L++
Sbjct: 590 -FLVALGVDYNIFLASRARQETMRLGAREGMLKALSATGGVITSAGLVLAATFGVLVTLP 648
Query: 703 LTAIHDFGRVLAVGIFASMFAAYLVTPAILQLEFGRKI 740
L + + G ++A G+ V L L GR++
Sbjct: 649 LVMLVEVGFLVAFGVLLDALLVRSVLVPALTLLIGRRM 686
>dbj|BAB04439.1| (AP001509) unknown conserved protein in others [Bacillus
halodurans]
Length = 687
Score = 89.3 bits (218), Expect = 1e-16
Identities = 153/749 (20%), Positives = 304/749 (40%), Gaps = 89/749 (11%)
Query: 5 IARVIVIYRHSLAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNEFGGS 64
IA I+ R ++ + L +SA + + +++ LP++ ++ K+ L+ EF +
Sbjct: 4 IAAFIIKKRKTIVLSFAILTFISAIALFFVSVNYNMTDYLPDEAQSTKAIEVLEEEFDRT 63
Query: 65 GSALIYVKIKNNDNVVDIRDPKIIEAMYSLEQRLREKEYVTDTFSIADLMVQILGRLPKN 124
S N V+ IRD + EA+ ++ L E + V+D + +++
Sbjct: 64 VS---------NARVM-IRDVTVQEALL-YKKELEEIDGVSDVIWLDEVI---------- 102
Query: 125 MDEVKFVLNMLPPEARNGLISGDYSSTIIIVNLN-REKNQKALVRVYNDIEREIERTNFP 183
+++ L M A L+ Y + +L RE ++ A+ ++
Sbjct: 103 --DLETPLEM----ADKDLVKSYYKDESALFSLTIREGDEVAVTDAIYELI--------- 147
Query: 184 QGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPLIFG 243
G + L+G+ T +M + ++ I+V+IL+ S I L L +
Sbjct: 148 -GEDNALSGEAVNTAVSQQMTGKETIYAASLLIPIIVIILIISTTSWIEPLFFLTAIGVS 206
Query: 244 VVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIA 303
V++ LG +G + + + + + +DY + + +R+ + R + + EEA + A+
Sbjct: 207 VLINLGTNIFIGEVSFVTQSVSPILQLAVSLDYAIFLLHRFSDYRKQTEDPEEAMQIAVR 266
Query: 304 ETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILEEEF 363
++ A+ +A TT GF AL+ L ++LV G+ L+ ++ ++ PAL I ++
Sbjct: 267 KSFPAIAASAATTFFGFTALTFMQFEIGADLGLNLVKGIVLSFISVMVFLPALTICFYKW 326
Query: 364 REKVMKK---KEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYGASKIT 420
+K + +IG G KI FI + +++L+I V Y A T
Sbjct: 327 IDKTQHRPFFPRFQSIGNGVMKIRFI-------------SLAVVSLLI--VPSYLAQGQT 371
Query: 421 TEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDPTLVRDILRFEREIKAD 480
+ + +P + I FG + +L+ DV R++ E+E++
Sbjct: 372 SFIYGIGELPESSRAGSDTATIEEVFGKSTPIVLLVPKGDV-----AREV-EMEQELEKV 425
Query: 481 SYINNVFE-TQSIADVVIQKYGYIPQDKEKISEAIEGSSLVSSDYSMTIIKLKGNFMGVT 539
YI NV QS++ + +Y I E++ S YS I+ + T
Sbjct: 426 DYITNVISYNQSVSATIPSEY---------IDESVT-EQFYSEHYSQIILYTE------T 469
Query: 540 QSEFNRIMEYFERAIQRADFPPGVKVELAGESYLNYVLNDLVNEELGKISTIGTLIVVMV 599
E E + A G GES Y + + ++ ++ + + + +V
Sbjct: 470 DVEGEVAFSVVETVQEIAASYYGDDALSLGESVSLYDMKTTIMKDNRVVNLLTVVAIAIV 529
Query: 600 VFAIFRRPTVSIAMIMPMFLGALW---TIGYMGLAGIPF-SQTLAGVVSMIVGLGVDYGM 655
+ FR ++ + +++ + A+W + Y A + + + G V + VDY +
Sbjct: 530 LLLTFRSISIPVILLLTI-QSAVWLNLAVPYFTDAPLVYLGYLIVGTVQL--AATVDYAI 586
Query: 656 HITHRFLEELNEGNKTPII--TALESVGPGIFVGALTTAGGFLALLSAQLTAIHDFGRVL 713
T +L + + I T E A+ ++ GF+ L++ + G +L
Sbjct: 587 LYTEGYLVNRRKMPRRQAITKTLTEKTFSISISAAILSSVGFILWLTSSNPVVSSIGLLL 646
Query: 714 AVGIFASMFAAYLVTPAILQLEFGRKISK 742
G + PA+L L F + I K
Sbjct: 647 GRGALLAFILVIFFLPAML-LVFDKAIRK 674
>emb|CAB59662.1| (AL132674) putative membrane transport protein [Streptomyces
coelicolor A3(2)]
Length = 745
Score = 87.4 bits (213), Expect = 5e-16
Identities = 149/772 (19%), Positives = 290/772 (37%), Gaps = 106/772 (13%)
Query: 2 LRKIARVIVIYRHSLAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNEF 61
L K+ R+ RH +A++ + LL L+ G + S +P EA K++ L+ F
Sbjct: 5 LYKLGRLAFRRRHFVALIWVALLTLAGVGAASAPPAGNSSFSIP-GTEAQKAFDLLEQRF 63
Query: 62 GGSGS----ALIYVKIKNNDNVVDIRDPKIIEAMYSLEQRLREKEYVTDTFSIADLMVQI 117
G+ + A + K + + D + +E + + E ++ S+AD
Sbjct: 64 PGASADGATARVVFKAPAGETMTDAGNKATVE------KTVDELADGSEVASVAD----- 112
Query: 118 LGRLPKNMDEVKFVLNMLPPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREI 177
P N +S D TI ++ + + L D +
Sbjct: 113 -------------------PYTGNA-VSED--GTIAYASVKYDVSGMELEESTKDALEDA 150
Query: 178 ERTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPL 237
+ G+ V + GD L+ + + T I + ++L+ + S + +PL
Sbjct: 151 AQQARDAGLTVEIGGDA------LQAVP-ETGATEVIGIAVAAVVLVITFGSLVSAGLPL 203
Query: 238 VPLIFGVVMTLGFMGLLGIPLDI-ATTTVGAMIIGM--GIDYGVHVTNRYYEERGKGKSL 294
+ + GV + + + L L++ +TT++ AM+IG+ GIDY + + +RY E +G+
Sbjct: 204 LTALIGVGIGVSSITALASALELGSTTSILAMMIGLAVGIDYALFIVSRYRAELAEGRER 263
Query: 295 EEAAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTP 354
EEAA A+ G A++ A LT + + L++ +P L ++ ++ + +A L A+ + P
Sbjct: 264 EEAAGRAVGTAGSAVVFAGLTVVIALVGLAVVNIPMLTKMGIAAAGTVAIAVLIALTMIP 323
Query: 355 A-LAILEEEFREKVMKKKEIIAIGGGKSK--------ISFIFSMLGKAIKRSPWTALLIA 405
A L + K K + G+ K + + + + R P LL+
Sbjct: 324 ALLGYAGRRVKPAGAKGKRLGRSRKGEPKPDRPAGQPKANLGTRWASFVVRRPLAVLLLG 383
Query: 406 LIISGVSLYGASKITTEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDPT 465
+I G + A+ + + + PT + +A + FG +++ D
Sbjct: 384 VIGLGAAAVPAASLELGLPDDGSQPTSTTQRRAYDLLSEGFGPGFNGPLMVVVDAKGSDA 443
Query: 466 LVRDILRFEREIKADSYINNVFETQSIADVVIQKYGYIPQDKEKISEAIEGSSLVSSDYS 525
E+ IK + V +P K SS+ + D
Sbjct: 444 PKDAFTDVEQRIKGLDGVVAVAPPAPNKGGDTATITVVPDSKP--------SSVQTEDLV 495
Query: 526 MTIIKLKGNFMGVTQSEFNRIMEYFERAIQRADFPPGVKVELAGESYLNYVLNDLVNEEL 585
I G+ T G + + G + +N ++ +N+ L
Sbjct: 496 HAIRDAGGDVEAKT----------------------GAETLVTGATAMNIDVSQKLNDAL 533
Query: 586 GKISTIGTLIVVMVVFAIFRRPTVSIAMIMPMFLGAL-------------WTIGYMGL-- 630
+ + +++ +FR V + + L + W G MG+
Sbjct: 534 VPYLVLVVGLAFLLLIVVFRSILVPLKAALGFLLSVMAALGAVVAVFQWGWLSGLMGVEE 593
Query: 631 AGIPFSQTLAGVVSMIVGLGVDYGMHITHRFLEELNEGNK--TPIITALESVGPGIFVGA 688
G S +V ++ GL +DY + + R E G K ++T + + A
Sbjct: 594 TGPVMSMMPIFMVGVVFGLAMDYEVFLVTRMREAYVHGEKPNQAVVTGFKHGARVVTAAA 653
Query: 689 LTTAGGFLALLSAQLTAIHDFGRVLAVGIFASMFAAYL-VTPAILQLEFGRK 739
+ F + + + + G LA+ +F F + + PA+L L G+K
Sbjct: 654 VIMMAVFAGFIGSSESMVKMIGFGLAIAVFFDAFVVRMAIVPAVLAL-LGKK 704
>sp|P54881|MML4_MYCLE PUTATIVE MEMBRANE PROTEIN MMPL4 >gi|699243|gb|AAA63006.1| (U15183)
transport protein [Mycobacterium leprae]
Length = 959
Score = 87.4 bits (213), Expect = 5e-16
Identities = 77/337 (22%), Positives = 141/337 (40%), Gaps = 20/337 (5%)
Query: 137 PEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERTNFPQGVEVVLTGDLGI 196
P G S D + + ++L + + + + + + +T P G+ +TG +
Sbjct: 126 PLTAPGAQSNDGKAAYVQLSLAGNQGELLAQESIDAVRKIVVQTPAPPGITAWVTGASAL 185
Query: 197 TYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPLIF------GVVMTLGF 250
+ M R A S I++++ LL Y+S I +++ L + GVV LG
Sbjct: 186 IADMHHSGDKSMIRITATSVIVILVTLLLVYRSFITVILLLFTVGIESAVARGVVALLGH 245
Query: 251 MGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKALL 310
GL+G+ A + ++ I G DYG+ +T RY E R ++ E A T +L
Sbjct: 246 TGLIGLST-FAVNLLTSLAIAAGTDYGIFITGRYQEARQANENKEAAFYTMYRGTFHVIL 304
Query: 311 GAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILEEEFREKVMKK 370
G+ LT LS + +P + L V +G+ +A A+ + PA+ + F + +
Sbjct: 305 GSGLTISGATFCLSFARMPYFQTLGVPCAVGMLIAVAVALTLGPAVLTVGSRF--GLFEP 362
Query: 371 KEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYGASKITTEVRLEKMIP 430
K +I + G + +G + R P L+ I+ V L T + +P
Sbjct: 363 KRLIKVRG--------WRRIGTVVVRWPLPILITTCAIAMVGLLALPGYRTNYKDRAYLP 414
Query: 431 TDLPEIQALSDIRSEFGG---QDEVTILIKADDVRDP 464
+P Q + F + E+ ++ D+R+P
Sbjct: 415 ASIPANQGFAAADRHFPQARMKPEILMIESDHDMRNP 451
>sp|O50439|MMLA_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL10 >gi|7479028|pir||G70876 probable
transmembrane protein - Mycobacterium tuberculosis
(strain H37RV) >gi|2695967|emb|CAA15860.1| (AL010186)
mmpL10 [Mycobacterium tuberculosis]
Length = 1002
Score = 86.2 bits (210), Expect = 1e-15
Identities = 89/372 (23%), Positives = 159/372 (41%), Gaps = 23/372 (6%)
Query: 117 ILGRLPKNMDEVKFVLNMLP-PEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIER 175
++ RL + +V + + L P R L S D + I+ + L + Y D+ER
Sbjct: 78 LVDRLRNDAKDVVMLQDFLTTPPLREVLGSKDGKAWILPIGLAGDLGTPKSYHAYTDVER 137
Query: 176 EIERTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLV 235
++RT + +TG + + D +++++IL+ Y++P+ ML+
Sbjct: 138 IVKRTVAGTTLTANVTGPAATVADLTDAGARDRASIELAIAVMLLVILMVIYRNPVTMLL 197
Query: 236 PLVPL------IFGVVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERG 289
PLV + +V + +G L + + A + AMI G G DY V + +RY+E
Sbjct: 198 PLVTIGASLMTAQALVAGVSLVGGLAVS-NQAIVLLSAMIAGAGTDYAVFLISRYHEYVR 256
Query: 290 KGKSLEEAAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNA 349
G+ E A + A+ GK + +A T FL + + L + +L +G+ ++ L A
Sbjct: 257 LGEHPERAVQRAMMSVGKVIAASAATVGITFLGMRFAKLGVFSTVGPALAIGIAVSFLAA 316
Query: 350 VIVTPALAILEEEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIIS 409
V + PA+ +L R V + E +++ + G I R P A L A +I
Sbjct: 317 VTLLPAILVLASP-RGWVAPRGE---------RMATFWRRAGTRIVRRP-KAYLGASLIG 365
Query: 410 GVSLYG-ASKITTEVRLEKMIPTDLPEIQALSDIRSEFGGQD---EVTILIKADDVRDPT 465
V+L AS K +P P + + F E I+ A D+R P
Sbjct: 366 LVALASCASLAHFNYDDRKQLPPSDPSSVGYAAMEHHFSVNQTIPEYLIIHSAHDLRTPR 425
Query: 466 LVRDILRFEREI 477
+ D+ + + +
Sbjct: 426 GLADLEQLAQRV 437
>sp|Q11171|MML2_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL2 >gi|7478399|pir||F70746 probable
mmpL2 protein - Mycobacterium tuberculosis (strain
H37RV) >gi|1449306|emb|CAB00933.1| (Z77162) mmpL2
[Mycobacterium tuberculosis]
Length = 968
Score = 85.0 bits (207), Expect = 3e-15
Identities = 84/367 (22%), Positives = 150/367 (39%), Gaps = 28/367 (7%)
Query: 137 PEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERTNFPQGVEVVLTGDLGI 196
P G S D + ++V L +A V+ + ++ T P GV+ +TG +
Sbjct: 124 PLTAAGSQSADDRAAYVVVYLVGNNETEAYDSVHA-VRHMVDTTPPPHGVKAYVTGPAAL 182
Query: 197 TYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPLIFGVVMTLGFMGLLGI 256
E + + AI+ +++ +LL Y+S I ++ L+ + + GF+ LL
Sbjct: 183 NADQAEAGDKSIAKVTAITSMVIAAMLLVIYRSVITAVLVLIMVGIDLGAIRGFIALLAD 242
Query: 257 P-----LDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKALLG 311
AT + M I DY + + RY+E R G+ E A T +LG
Sbjct: 243 HNIFSLSTFATNLLVLMAIAASTDYAIFMLGRYHESRYAGEDRETAFYTMFHGTAHVILG 302
Query: 312 AALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILEEEFREKVMKKK 371
+ LT LS + LP + L + +G+ +A L A+ + PA+ + F+ K++
Sbjct: 303 SGLTIAGAMYCLSFARLPYFETLGAPIAIGMLVAVLAALTLGPAVLTVGSFFKLFDPKRR 362
Query: 372 EIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYGASKITTEVRLEKMIPT 431
+ + +G AI R P L +++ + L T L K +P
Sbjct: 363 ----------MNTRRWRRVGTAIVRWPGPVLAATCLVASIGLLALPSYRTTYDLRKFMPA 412
Query: 432 DLPEI--QALSDIRSEFGGQDEVTILIKAD-DVRDPTLVRDILRFEREIKADSYINNVFE 488
+P A + R + +LI+ D D+R+P D+L ++ K N++
Sbjct: 413 SMPSNVGDAAAGRRFSRARLNPEVLLIETDHDMRNPV---DMLVLDKVAK------NIYH 463
Query: 489 TQSIADV 495
+ I V
Sbjct: 464 SPGIEQV 470
>sp|O53735|MML4_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL4 >gi|7478403|pir||C70831 probable
mmpL4 protein - Mycobacterium tuberculosis (strain
H37RV) >gi|2909525|emb|CAA17407.1| (AL021932) mmpL4
[Mycobacterium tuberculosis]
Length = 967
Score = 84.7 bits (206), Expect = 3e-15
Identities = 79/365 (21%), Positives = 147/365 (39%), Gaps = 23/365 (6%)
Query: 137 PEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERTNFPQGVEVVLTGDLGI 196
P G+ S D + + ++L + + +E T P G++ +TG +
Sbjct: 129 PLTAAGVQSNDGKAAYVQLSLAGNQGTPLANESVEAVRSIVESTPAPPGIKAYVTGPSAL 188
Query: 197 TYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPL------IFGVVMTLGF 250
+ M R ++ ++ ++LL Y+S I +++ L+ + GVV LG
Sbjct: 189 AADMHHSGDRSMARITMVTVAVIFIMLLLVYRSIITVVLLLITVGVELTAARGVVAVLGH 248
Query: 251 MGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKALL 310
G +G+ A + + ++ I G DYG+ + RY E R G+ E A T +L
Sbjct: 249 SGAIGLTT-FAVSLLTSLAIAAGTDYGIFIIGRYQEARQAGEDKEAAYYTMYRGTAHVIL 307
Query: 311 GAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILEEEFREKVMKK 370
G+ LT LS + +P + L + +G+ +A AV +T A+L R +
Sbjct: 308 GSGLTIAGATFCLSFARMPYFQTLGIPCAVGMLVAV--AVALTLGPAVLHVGSRFGLFDP 365
Query: 371 KEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYGASKITTEVRLEKMIP 430
K ++ + G + +G + R P L+ I+ V L T +P
Sbjct: 366 KRLLKVRG--------WRRVGTVVVRWPLPVLVATCAIALVGLLALPGYKTSYNDRDYLP 417
Query: 431 TDLPEIQALSDIRSEFGG---QDEVTILIKADDVRDPTLVRDILRFEREIKADSYINNVF 487
+P Q + F + E+ ++ D+R+P D L ++ K + +
Sbjct: 418 DFIPANQGYAAADRHFSQARMKPEILMIESDHDMRNPA---DFLVLDKLAKGIFRVPGIS 474
Query: 488 ETQSI 492
Q+I
Sbjct: 475 RVQAI 479
>sp|O07800|MML8_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL8 >gi|7478406|pir||C70522 probable
mmpL8 protein - Mycobacterium tuberculosis (strain
H37RV) >gi|3261809|emb|CAB10022.1| (Z97188) mmpL8
[Mycobacterium tuberculosis]
Length = 1089
Score = 82.7 bits (201), Expect = 1e-14
Identities = 87/366 (23%), Positives = 162/366 (43%), Gaps = 44/366 (12%)
Query: 137 PEARNGLISGDYSSTIIIV----NLNREKNQKALVRVYNDIEREIERTNFPQGVEVVLTG 192
P R + S D + I+ V +L ++++A RV + +E ++ + LTG
Sbjct: 144 PPLRELMTSKDNQAWILPVGLPGDLGSTQSKQAYARVADIVEHQVAGSTLTAN----LTG 199
Query: 193 DLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPLIFGVVMTLGFMG 252
+ Q D +R I++++ILL Y +PI M++PL+ + VV+ +
Sbjct: 200 PAATVADLNLTGQRDRSRIEFAITILLLVILLIIYGNPITMVLPLITIGMSVVVAQRLVA 259
Query: 253 LLGIP-LDIATTTV---GAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKA 308
+ G+ L IA ++ M++G G DY V + +RY++ +G ++A ++A+ GK
Sbjct: 260 IAGLAGLGIANQSIIFMSGMMVGAGTDYAVFLISRYHDYLRQGADSDQAVKKALTSIGKV 319
Query: 309 LLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILEEEFREKVM 368
+ +A T FL + + L LK + L + + + AV + PAL +L R +
Sbjct: 320 IAASAATVAITFLGMVFTQLGILKTVGPMLGISVAVVFFAAVTLLPALMVLTGR-RGWIA 378
Query: 369 KKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALII-------SGVSLYGASKITT 421
++++ + G I R P T LL + ++ +G++ Y T
Sbjct: 379 PRRDL---------TRRFWRSSGVHIVRRPKTHLLASALVLVILAGCAGLARYNYDDRKT 429
Query: 422 ----------EVRLEKMIPTDL--PE---IQALSDIRSEFGGQDEVTILIKADDVRDPTL 466
L+K P++L PE IQ+ +D+R+ D ++ + V +
Sbjct: 430 LPASVESSIGYAALDKHFPSNLIIPEYLFIQSSTDLRTPKALADLEQMVQRVSQVPGVAM 489
Query: 467 VRDILR 472
VR I R
Sbjct: 490 VRGITR 495
>emb|CAB56653.1| (AL121596) putative membrane transport protein [Streptomyces
coelicolor A3(2)]
Length = 765
Score = 82.3 bits (200), Expect = 2e-14
Identities = 116/565 (20%), Positives = 222/565 (38%), Gaps = 80/565 (14%)
Query: 218 IVVLILLYFYKSPIRMLVPLVPLIFGVVMTLGFMGLLGIPLDIATTTVG-AMIIGM--GI 274
+ ++LL + S +PL+ + GV +TL + LG L ++T + AM+IG+ G+
Sbjct: 184 VAAVVLLITFGSLAAAGLPLITAVVGVALTLASIVALGSALGMSTASGDLAMMIGIAVGV 243
Query: 275 DYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRL 334
DY + V +RY EER +G EAA A+ G A++ A LT + LS+ +PSL ++
Sbjct: 244 DYALLVVSRYREERAEGHDAREAAGLAVGTAGSAVVFAGLTVVIALAGLSVIGVPSLTKM 303
Query: 335 SVSLVMGLGLAALNAVIVTPAL------AILEEEFRE-----------KVMKKKEIIAIG 377
++ + +A L + + PAL A+L R+ K +
Sbjct: 304 GLAAAGAVVIAVLITLTLVPALCGFWPDALLARRVRKGRSAPPARRFRKGRSTPPARRLR 363
Query: 378 GG-------KSKISFIFSM-LGKAIKRSPWTALLIALIISGVSLYGASKITTEVRLEKMI 429
GG +++ + +S+ + ++R P LL + ++ G A + + ++
Sbjct: 364 GGPGRGAARRTREAGAWSVRWARFVQRRPVPVLLGSAVLLGALAVPALDLRLGMPGDEAK 423
Query: 430 PTDLPEIQALSDIRSEFGG--QDEVTILIKADDVRDPTLVRDILRFEREIKADSYINNVF 487
PT E +A + FG +T+++ A DP
Sbjct: 424 PTSTTERRAYDALADGFGPGFNGPLTVVVDARQADDPRSA-------------------- 463
Query: 488 ETQSIADVVIQKYGYIPQDKEKISEAIEGSSLVSSDYSMTIIKLKGNFMGVTQSEFNRIM 547
+++D + G + + + A + + + + + T ++
Sbjct: 464 -VAAVSDRLAATAGVVSVAPPRFNAAKDTAVIQAVPAT-----------APTSERTEELV 511
Query: 548 EYFERAIQRADFPPGVKVELAGESYLNYVLNDLVNEELGKISTIGTLIVVMVVFAIFRRP 607
+ G E+ G + LN + + + L + + +++ +FR
Sbjct: 512 HTIRDERHATESATGATFEVTGTTALNIDVARKMTDALIPYLLVVVGLAFLLLLVVFRSV 571
Query: 608 TVSIAMIMPMFL------GALWTI---GY-MGLAGI----PFSQTL-AGVVSMIVGLGVD 652
V + + L GAL TI G+ GL G+ P T+ +V ++ GL +D
Sbjct: 572 LVPLKAALGFLLSVGASFGALVTIFQNGHGAGLLGVEETGPVMSTMPLMLVGIVFGLAMD 631
Query: 653 YGMHITHRFLEELNEGNK--TPIITALESVGPGIFVGALTTAGGFLALLSAQLTAIHDFG 710
Y + + R E + G + ++T G + A+ F ++ T + G
Sbjct: 632 YQVFLVSRMREAVVHGERPAEAVVTGFRHSGRVVTAAAVIMTSVFAGFMTGGETLLKMVG 691
Query: 711 RVLAVGIFASMFAAYLV-TPAILQL 734
LAV + F + PA+L L
Sbjct: 692 FGLAVAVLFDAFVVRMAFVPAVLVL 716
>gb|AAF97217.1|AF271635_1 (AF271635) putative transport membrane protein C [Mycobacterium
smegmatis]
Length = 994
Score = 81.5 bits (198), Expect = 3e-14
Identities = 80/325 (24%), Positives = 133/325 (40%), Gaps = 23/325 (7%)
Query: 177 IERTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVP 236
+ RT P+GV V +TG + + + + A++ +I+ +LL Y+S I +++
Sbjct: 174 VARTPAPEGVSVYVTGAAPLVSDMQHSGNRSILKITAVTVVIIFAMLLMVYRSVITVILL 233
Query: 237 LVPLIFGVVMTLGFMGLLGIP--LDIATTTVGAMI---IGMGIDYGVHVTNRYYEERGKG 291
L+ + F V G + LG ++T V ++ I G DYG+ RY E R G
Sbjct: 234 LIMVGFEVAAARGIVAFLGANEVFVLSTFAVNMLVFLAIAAGTDYGIFFFGRYQEARAAG 293
Query: 292 KSLEEAAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVI 351
+ E A ++ + LT L+ + LP + V +G+ A AV
Sbjct: 294 EDRETAYYSMYRGVTPVVMASGLTIAGAIFCLTFTRLPYFHTMGVPCAIGMLAAVAVAVT 353
Query: 352 VTPALAILEEEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGV 411
+ PA L K+K + G +G AI R P L+ +L ++ V
Sbjct: 354 LVPAGVALAGRIGWLEPKRKMRVRRWRG----------IGTAIVRWPAPILVASLAVALV 403
Query: 412 SLYGASKITTEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVT---ILIKAD-DVRDPTLV 467
L T IP D+P + F Q +T +++++D D+R+PT
Sbjct: 404 GLLALPGYETSYNDRDYIPADIPANAGFAAADRHF-SQARMTPDILMVESDHDMRNPT-- 460
Query: 468 RDILRFEREIKADSYINNVFETQSI 492
D L + KA + V Q I
Sbjct: 461 -DFLVLNKIAKAIFKVRGVSRVQGI 484
>pir||E71280 probable antibiotic transport protein - syphilis spirochete
>gi|3323098|gb|AAC65756.1| (AE001250) antibiotic
transport protein, putative [Treponema pallidum]
Length = 888
Score = 80.4 bits (195), Expect = 7e-14
Identities = 102/489 (20%), Positives = 202/489 (40%), Gaps = 50/489 (10%)
Query: 16 LAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNEFGGSGSALIYVKIKN 75
L V L + A + LR + + + +P++ + + + FG LI +K +
Sbjct: 31 LVAVLSALTLFFAVQLRTLRLDNNNFRFIPKENSVRIADQRIDSTFGSQVPVLIGIKREY 90
Query: 76 NDNVVDIRDPKIIEAMYSLEQRLREKEYVTDTFSIADLMVQILGRLPKNMDEVKFVLNML 135
V DP + + SL +R+ V +++ L + LG N+ + V +
Sbjct: 91 TSVV----DPVFLADVRSLIERISAVPLVRAESTLSLLSAEYLGLRAGNIISERVVPDEF 146
Query: 136 PPEARN----------------GLISGDYSSTIIIVNLNREKNQ----------KALVRV 169
A L+S D S I+V L+ + +A++R+
Sbjct: 147 SGSAEEVQGVYRKLRDWDFYECSLVSRDLRSMQIVVFLDTSNEESSSPEAMAACRAIIRI 206
Query: 170 YNDIEREIERTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKS 229
+ +T F GV V ++G E +D+ + + +I+++ L ++
Sbjct: 207 LGAWKSRDAQT-FVTGVTVF--NEMGN-----EASTHDLTLLVPLVVLIIIVALFVSFRR 258
Query: 230 PIRMLVPLVPLIFGVVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYY---E 286
+ +PL+ ++ V LG M L IPL I + + ++I +G YG+H+ + Y+
Sbjct: 259 LAGIFLPLLTVVISTVWALGAMALCAIPLSILSAILPVILIAVGSAYGIHIVSAYFYGAS 318
Query: 287 ERGKGKSLEEAAE--EAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGL 344
R E A EA+ + + + +ALTT GF++ + + + V +G+
Sbjct: 319 SRICSTRQEHRARIVEAVDKIIQPVFLSALTTFVGFVSFCFTSVVPIFEFGVFASVGVAS 378
Query: 345 AALNAVIVTPALAILEEEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLI 404
A A+++ P+L I+ +V A G + + I T L +
Sbjct: 379 AFAVALMLIPSLLIIRGP-ESRVCAH----APDAGHEHMDTAITGTLMVIAHHYRTVLFV 433
Query: 405 ALIISGVSLYGASKITTEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDP 464
A + SL G S++ + L + ++ +Q+ ++ FGG +T+L+ + RD
Sbjct: 434 AFLAVVFSLVGMSRLVIDNVLTEYFEPEVTVVQSDRFMQQHFGGSRSLTVLV-STPARDG 492
Query: 465 TLVR-DILR 472
++ R D+L+
Sbjct: 493 SVARPDVLK 501
Score = 77.3 bits (187), Expect = 6e-13
Identities = 87/377 (23%), Positives = 163/377 (43%), Gaps = 55/377 (14%)
Query: 398 PWTALLIALIISGVSLYGASKITTEVRLE----KMIPTDLPEIQALSDIRSEFGGQDEVT 453
PW ++ ++S ++L+ A ++ T +RL+ + IP + A I S FG Q V
Sbjct: 28 PW---VLVAVLSALTLFFAVQLRT-LRLDNNNFRFIPKENSVRIADQRIDSTFGSQVPVL 83
Query: 454 ILIKAD--DVRDPTLVRDILRFEREIKADSYINNVFETQSIADVVIQKY----------- 500
I IK + V DP + D+ I A + +S ++ +Y
Sbjct: 84 IGIKREYTSVVDPVFLADVRSLIERISAVPLVR----AESTLSLLSAEYLGLRAGNIISE 139
Query: 501 GYIPQDKEKISEAIEG------------SSLVSSDY-SMTIIKLKGNFMGVTQSEFNRIM 547
+P + +E ++G SLVS D SM I+ T +E +
Sbjct: 140 RVVPDEFSGSAEEVQGVYRKLRDWDFYECSLVSRDLRSMQIVVFLD-----TSNEESSSP 194
Query: 548 EYFE--RAIQR---ADFPPGVKVELAGESYLNYVLNDLVNEELGKISTIGTLIVVMVVFA 602
E RAI R A + + G + N + N+ +L + + LI+++ +F
Sbjct: 195 EAMAACRAIIRILGAWKSRDAQTFVTGVTVFNEMGNEASTHDLTLLVPLVVLIIIVALFV 254
Query: 603 IFRRPTVSIAMIMPMFLGALWTIGYMGLAGIPFSQTLAGVVSMIVGLGVDYGMHITHRF- 661
FRR ++ + + +W +G M L IP S A + +++ +G YG+HI +
Sbjct: 255 SFRRLAGIFLPLLTVVISTVWALGAMALCAIPLSILSAILPVILIAVGSAYGIHIVSAYF 314
Query: 662 ------LEELNEGNKTPIITALESVGPGIFVGALTTAGGFLALLSAQLTAIHDFGRVLAV 715
+ + ++ I+ A++ + +F+ ALTT GF++ + I +FG +V
Sbjct: 315 YGASSRICSTRQEHRARIVEAVDKIIQPVFLSALTTFVGFVSFCFTSVVPIFEFGVFASV 374
Query: 716 GIFASMFAAYLVTPAIL 732
G+ ++ A ++ P++L
Sbjct: 375 GVASAFAVALMLIPSLL 391
Score = 76.9 bits (186), Expect = 8e-13
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 15/256 (5%)
Query: 498 QKYGYIPQDKEKISEAIEGSSLVSSDYSMTIIK-------LKGNFMGVT--QSEFNRIME 548
+KYG + E++ E I G L+ S + ++ LK N T Q + ++E
Sbjct: 637 KKYGV--KTSEELQEIISGYLLLLSGKGLGLVDRAVDPRALKMNIQLGTKGQQDSYGVIE 694
Query: 549 YFERAIQRADFPPGVKVELAGESYLNYVLNDLVNEELGKISTIGTLIVVMVVFAI-FRRP 607
++ I R +FP V E G + LNDLV + IS + +L VV ++ A+ +R
Sbjct: 695 AVKKFI-RENFPQDVHAEFGGSVLVEQSLNDLVVQSQ-LISLVFSLCVVFIIIAVHYRSL 752
Query: 608 TVSIAMIMPMFLGALWTIGYMGLAGIPFSQTLAGVVSMIVGLGVDYGMHITHRFLEELNE 667
I +P+ + L G MG GI + V G+GVDY +H + E
Sbjct: 753 FAGIIGTLPLGVSVLVNFGVMGFFGIKLNICTTMVAGFSSGIGVDYTIHYLAAYRRAWKE 812
Query: 668 -GNKTPIITALESVGPGIFVGALTTAGGFLALLSAQLTAIHDFGRVLAVGIFASMFAAYL 726
G K + G I L+ GF L+ ++ + DFG ++ + + S A+
Sbjct: 813 CGGKDFLTQTFYGSGRAILFNVLSVGSGFAVLMLSKFNVLADFGLLMVLAMLTSSVASLT 872
Query: 727 VTPAILQLEFGRKISK 742
+ P +L + R I++
Sbjct: 873 LLPTLLNVVKPRFITR 888
Score = 71.0 bits (171), Expect = 4e-11
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 3/204 (1%)
Query: 155 VNLNREKNQKALVRVYNDIE--REIERTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTM 212
+ +N + K Y IE ++ R NFPQ V G + + + +++ ++
Sbjct: 675 LKMNIQLGTKGQQDSYGVIEAVKKFIRENFPQDVHAEFGGSVLVEQSLNDLVVQSQLISL 734
Query: 213 AISGIIVVLILLYFYKSPIRMLVPLVPLIFGVVMTLGFMGLLGIPLDIATTTVGAMIIGM 272
S +V +I+ Y+S ++ +PL V++ G MG GI L+I TT V G+
Sbjct: 735 VFSLCVVFIIIAVHYRSLFAGIIGTLPLGVSVLVNFGVMGFFGIKLNICTTMVAGFSSGI 794
Query: 273 GIDYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKALLGAALTTIAGFLALSISILPSLK 332
G+DY +H Y K ++ + +G+A+L L+ +GF L +S L
Sbjct: 795 GVDYTIHYL-AAYRRAWKECGGKDFLTQTFYGSGRAILFNVLSVGSGFAVLMLSKFNVLA 853
Query: 333 RLSVSLVMGLGLAALNAVIVTPAL 356
+ +V+ + +++ ++ + P L
Sbjct: 854 DFGLLMVLAMLTSSVASLTLLPTL 877
>sp|Q50585|MMLC_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL12 >gi|7478398|pir||B70723 probable
mmpL12 protein - Mycobacterium tuberculosis (strain
H37RV) >gi|1477435|emb|CAB01394.1| (Z77826) mmpL12
[Mycobacterium tuberculosis]
Length = 1146
Score = 79.2 bits (192), Expect = 2e-13
Identities = 77/352 (21%), Positives = 158/352 (44%), Gaps = 25/352 (7%)
Query: 137 PEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIEREIERTNFPQGVEVVLTGDLGI 196
PE + L S D + + + + + + +++T + V L+G +
Sbjct: 126 PEMKELLASKDNKAWNLPITFAGDAASPETQAAFKRVAAIVKQTVAGTSLTVHLSGPIAT 185
Query: 197 TYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLVPLIFGVVM---TLGFMGL 253
+ E+ + D+ + + V++IL+ Y++ + MLVPL + VV TL +
Sbjct: 186 VADLTELGEKDVRIIEIGTAVSVLIILILVYRNLVTMLVPLATIGASVVTAQGTLSGLAE 245
Query: 254 LGIPLDI-ATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKALLGA 312
G+ +++ A + A++IG G DY V + +RY++ G+ + A ++A+ GK + +
Sbjct: 246 FGLAVNMQAIVFMSAVMIGAGTDYAVFLISRYHDYVRHGEKSDMAVKKALMSIGKVITAS 305
Query: 313 ALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILEEEFREKVMKKKE 372
A T FLA+ + L + ++ + + ++ L AV + PA+ L R + +++
Sbjct: 306 AATVAVTFLAMVFTKLEVFSAVGPAIAVAITVSLLGAVTLLPAILTLTGR-RGWIKPRRD 364
Query: 373 IIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYGASKITTEVRLE----KM 428
+ + +S + + ++RS T L+ +I V+L G T +R K
Sbjct: 365 LTSRMWRRSGV--------RIVRRS--TIHLVGSLIVLVALAGC---TLLIRFNYDDLKT 411
Query: 429 IPTDLPEIQALSDIRSEF--GGQDEVTILIKAD-DVRDPTLVRDILRFEREI 477
+P + ++ + F + + IK+ D+R P + DI REI
Sbjct: 412 VPQHVESVKGYEAMNRHFPMNAMTPMVLFIKSPRDLRTPGALADIEMMSREI 463
>sp|Q49619|MMLA_MYCLE PUTATIVE MEMBRANE PROTEIN MMPL10 >gi|2145979|pir||S72698 transport
protein tp1 - Mycobacterium leprae
>gi|466786|gb|AAA17062.1| (U00010) transport protein
(similarity to antibiotic transport protein actII-3 from
S.coelicolor); tp1; Lepb1170_C1_181 [Mycobacterium
leprae]
Length = 1008
Score = 78.0 bits (189), Expect = 3e-13
Identities = 83/377 (22%), Positives = 157/377 (41%), Gaps = 26/377 (6%)
Query: 117 ILGRLPKNMDEVKFVLNMLP-PEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIER 175
++ RL + +V + + L P L+S D + I+ + L E A + Y +
Sbjct: 104 LVDRLRNDTKDVVVLQDFLSTPPLHELLVSKDGKAWILPIVLAGELGTSASYQAYAGVAG 163
Query: 176 EIERT---NFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIR 232
+++T ++ LTG + + D + ++++ IL+ Y++PI
Sbjct: 164 IVKQTLESTAGSSLKANLTGPASTVADLTDAGARDRTSIELVIAVLLLTILMIIYRNPIT 223
Query: 233 MLVPLVPLIFGVVMTLGFMGLLGIPLDIATTT-----VGAMIIGMGIDYGVHVTNRY--Y 285
ML+PL+ + ++ + + + +A + + AMI G G DY V + +RY Y
Sbjct: 224 MLLPLITIGASLMTAQAVVSGVSVLAGLAVSNQMIVLLSAMIAGAGTDYAVFLISRYHDY 283
Query: 286 EERGKGKSLEE--AAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLG 343
G G + + A +A+ GK + +A T FL +S + + + +L +G+
Sbjct: 284 IRMGSGSAQDAGCAVRQALISLGKVIAASAATVGITFLGMSFTKIRVFSTVGPALAIGIA 343
Query: 344 LAALNAVIVTPALAILEEEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALL 403
+A L AV + PAL +L R V +++ + + G I R P L
Sbjct: 344 VAFLAAVTLMPALLVLAGT-RGWVAPRRD---------RAGAFWRRTGVRIVRRPVAYLS 393
Query: 404 IALIISGVSLYGASKITTEVRLEKMIPTDLPEIQALSDIRSEFG-GQ--DEVTILIKADD 460
+++I V AS + K IP + + S F GQ E ++ D
Sbjct: 394 ASMVILIVLALCASLVRFNYDDRKQIPASDESSVGYAALESHFPVGQAIPEYLLIQSPHD 453
Query: 461 VRDPTLVRDILRFEREI 477
+R P + D+ + +
Sbjct: 454 LRTPRALADMAELAQRV 470
>pir||A75560 conserved hypothetical protein - Deinococcus radiodurans (strain
R1) >gi|6457770|gb|AAF09696.1|AE001873_6 (AE001873)
conserved hypothetical protein [Deinococcus radiodurans]
Length = 749
Score = 76.5 bits (185), Expect = 1e-12
Identities = 125/650 (19%), Positives = 258/650 (39%), Gaps = 58/650 (8%)
Query: 120 RLPKNMDEVKFVLNMLPPEARNGLISGDYSSTIIIVNLN---REKNQKALVRVYNDIERE 176
R + +VK V +LP + R GL S D + T+ + +E ++A+ R+ R
Sbjct: 100 RFVSGLRDVKGVTRVLPAQ-RGGLGSRDAAGTLALTVAQIPLQEDGKEAVARI-----RA 153
Query: 177 IERTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVP 236
R +++ +TG I E+ + D R+ ++ ++ L+LL + + + +P
Sbjct: 154 YVRRVASPALDIRVTGGQAIADDFTELAEADTKRSEFVALPLIALLLLLVFGALVATGLP 213
Query: 237 LVPLIFGVVMTLGFMGLLGIPLDIAT---TTVGAMIIGMGIDYGVHVTNRYYEERGKGKS 293
LV + + + + + L ++++T + V + +G GIDY + + NR+ EE + +
Sbjct: 214 LVIGMLSISVAMAGLYFLTTVMEVSTFAQSVVTMLGLGAGIDYALLMVNRFREELARRGN 273
Query: 294 LEEAAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVT 353
EAA + G+++L + T L + L ++ + + V+ + L L ++
Sbjct: 274 AAEAAARTVETAGRSVLFSGSTVAIAMAGLLLPPLSFVRSIGIGGVLAVVLTVLASLTAL 333
Query: 354 PALAILEEEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSL 413
PAL L ++V + + + + S ++ + + P ++++ +
Sbjct: 334 PALLTL---LGDRVNAPRLLRSTWAQSAGASAAWTAFARRVTARPLAVVVLSTAFLLLLA 390
Query: 414 YGASKITTEVRLEKMIPTDLPEIQALSDIRSEFGG--QDEVTILIKADDVRDPTLVRDIL 471
AS++ T + + AL D+R G + +L+ + R
Sbjct: 391 VPASRMKTGYAGAWGLVPGVESRDALQDVRDMGAGGLLSQYEVLLDLEGKRYTP------ 444
Query: 472 RFEREIKADSYINNVFETQSIADVVIQKYGYIPQDKEKISEAIEGSSLVSSDYSMTIIKL 531
++ + + +N++ + V+ P D + S +
Sbjct: 445 --DQSARFQAVVNDLRALPGVRAVL--SPFLTPADLQAAGGGTSDGLAALSLLTQRSFSR 500
Query: 532 KGNFMGVTQSEFNR----IMEYFERAIQRADFPPGVKVELAGESYLNYVLNDLVNEELGK 587
F+ VT + + FE+ ++ G + + G ++ + + L
Sbjct: 501 DRTFLRVTVVPDDTLRADLAPAFEKRVRAVLEGSGSRFLVGGAPVGGREFSEAITDTLPT 560
Query: 588 ISTI---GTLIVVMVVFAIFRRPTVSIAMIMPMFLGA-----LWTI---GYMGLAGIPFS 636
+ GT +++++ F P SI M + +GA W + + GL G+P S
Sbjct: 561 VMLAVFGGTFVLLLLAFRSLLIPLKSIVM-NALTVGAAAGVVTWAVQEGHFAGLLGLPAS 619
Query: 637 QTLAGVV---------SMIVGLGVDYGMHITHRFLEELNEG--NKTPIITALESVGPGIF 685
AGV+ +++ GL +DY + + R EE G N ++ A+ I
Sbjct: 620 ---AGVLDSSLPLLLFAVMFGLSMDYEIFLLSRVQEEHLAGASNDEAVVRAVGHTARIIT 676
Query: 686 VGALTTAGGFLALLSAQLTAIHDFGRVLAVGIFASMFAAYLV-TPAILQL 734
A+ F A + ++ A G LAV + LV PA L+L
Sbjct: 677 SAAVIMFIVFTAFMFGRVVATKSVGLGLAVAVVLDATLVRLVLVPAFLKL 726
>sp|Q53902|MMLA_STRCO PUTATIVE MEMBRANE PROTEIN ACTII-3 >gi|80715|pir||C40046 antibiotic
transport-associated protein actII-3 - Streptomyces
coelicolor >gi|153146|gb|AAA26691.1| (M64683) ORF3
[Streptomyces coelicolor]
Length = 711
Score = 75.3 bits (182), Expect = 2e-12
Identities = 55/214 (25%), Positives = 105/214 (48%), Gaps = 7/214 (3%)
Query: 151 TIIIVNLNREKNQKALVRVYNDIEREIERTNFPQGVEVVLTGDLGITYKILEMLQNDMNR 210
T++ V+L ++ + L D+ R I R + P G+ V +TG G E + +
Sbjct: 121 TVVNVHLGKD-GWEGLNAAAKDM-RAIARPSAPDGLGVHVTGPTGYAADSAESFSSADFK 178
Query: 211 TMAISGIIVVLILLYFYKSPIRMLVPLVPLIFGVVMTLGFMGLL----GIPLDIATTTV- 265
++ +IVV IL+ Y+SP+ L+P++ +V++ + LL G+ ++ T +
Sbjct: 179 LTLVTLLIVVTILVVTYRSPLLWLLPMISAGMSLVISQAIVYLLAKNAGLTVNAQTAMIL 238
Query: 266 GAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKALLGAALTTIAGFLALSI 325
+++G DY + + RY EE + + EA A+ G A++ +A T L L +
Sbjct: 239 TVLVLGAATDYALLLVARYREELRRHEDRHEAMAVALRRAGPAIVASAATVAVSMLVLLL 298
Query: 326 SILPSLKRLSVSLVMGLGLAALNAVIVTPALAIL 359
+ L S K L +G+ + L+ + + PAL ++
Sbjct: 299 AALNSTKGLGPVCAVGVLVGLLSMMTLLPALLVI 332
>pir||T23399 hypothetical protein K07C10.1 - Caenorhabditis elegans
>gi|3878347|emb|CAA87375.1| (Z47074) similarity to
transmembranous domains of the drosophila protein
patched (Swiss Prot accession number P18502)
[Caenorhabditis elegans]
Length = 690
Score = 74.5 bits (180), Expect = 4e-12
Identities = 114/526 (21%), Positives = 206/526 (38%), Gaps = 60/526 (11%)
Query: 251 MGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKALL 310
+G +G P + +I+G+G+D + N + E GK KS ++A + +
Sbjct: 151 LGWVGHPFNSIMCITPFLILGIGVDDAFLLLNCWRREEGKDKSAKQAENQLARVIREISP 210
Query: 311 GAALTTIAGFLALSISILPSLKRLSVSLVMGLGLA-----ALNAVIVTPA---------- 355
A+T++ +A + L ++S S +G LA L +I P
Sbjct: 211 SMAITSLTNTMAFGVGFLAPTPQMS-SFCLGTALAIVLDFLLEFLIFVPCMVLFYKKKPE 269
Query: 356 -LAILEEEF-REKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIIS--GV 411
+AI EEF EK K+ E G S+I+ + + P L+I L S
Sbjct: 270 IIAIENEEFANEKTEKRSETST--GKYSRIN--WKCFTNLLLSVPGRVLVIILYFSIFTA 325
Query: 412 SLYGASKITTEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDPTLVRDI- 470
S +G +K+ K P+D + +L+ S + L D+++ T V +
Sbjct: 326 SYFGVAKMEKTFDPSKTFPSDSKLVDSLASFTSIQVEYSPLNFLSSVPDLKNDTDVANFN 385
Query: 471 -----LRFEREIKADSYINNVF----ETQSIADVVIQKYGYIPQDKEKISEAIEGSSLVS 521
L F E D +N++ + + +++ + Y ++ + + A G+
Sbjct: 386 EMLHKLEFREECYGDVGSHNMYRDYVQFLNYSNITDKSYNHLEKFLKGRGMADVGTIKYH 445
Query: 522 SDYSMTIIKLKGNFMGVTQSEFNRIMEYFERAIQRADFPPGVKVELAGESYLNYVLNDLV 581
+ + TII + NF+ V Q E+ +RA + L S N L D
Sbjct: 446 KEGNDTIIDMI-NFVVVCQGR--------EKWAERAVNVEKTRQILVDYSDYNITLFDYD 496
Query: 582 NEELGKISTI-GTLIVVMVVFAIFRRPTVSIAMIMPMFLG-----------ALWTIGYMG 629
I T+ G L+ + + F T++ +IMP F+ + IG++
Sbjct: 497 GTIYDLIITVKGELVKSLAI--TFTCMTIACFVIMPSFVAPTIASVATVSISFCLIGFLS 554
Query: 630 LAGIPFSQTLAGVVSMIVGLGVDYGMHITHRF--LEELNEGNKTPIITA-LESVGPGIFV 686
+ G V M +G VDY H+ + + E + G+K +IT+ L++VG +
Sbjct: 555 IWGQNLDPVTMIDVIMAIGFSVDYSAHVCYHYYCAREQHLGSKHEVITSVLQAVGRPVVE 614
Query: 687 GALTTAGGFLALLSAQLTAIHDFGRVLAVGIFASMFAAYLVTPAIL 732
+LTT L + I F + + + + P +L
Sbjct: 615 ASLTTLLCMAPLFVVPVYMIQSFAKTVTLVTSFGLLHGLFFLPVVL 660
>sp|P96706|YDGH_BACSU PUTATIVE MEMBRANE PROTEIN YDGH >gi|7475936|pir||B69783 transporter
homolog ydgH - Bacillus subtilis
>gi|1881371|dbj|BAA19398.1| (AB001488) PROBABLE
TRANSPORT PROTEIN, SIMILAR PRODUCT IN MYCOBACTERIUM
LEPRAE. [Bacillus subtilis] >gi|2632865|emb|CAB12372.1|
(Z99106) similar to transporter [Bacillus subtilis]
>gi|2632878|emb|CAB12384.1| (Z99107) similar to
transporter [Bacillus subtilis]
Length = 885
Score = 73.7 bits (178), Expect = 7e-12
Identities = 84/405 (20%), Positives = 176/405 (42%), Gaps = 31/405 (7%)
Query: 123 KNMDEVKFVLNMLPPE--ARNGLISGDYSSTIIIVNL--NREKNQKALVRVYNDIEREIE 178
K +D V+ V + L E ++ L+S D + ++ V + + +K +K +Y +
Sbjct: 90 KKIDGVEEVTSPLSAEKEVKDQLMSKDKKTVLMPVTITGSDKKAEKIADEIYQIV----- 144
Query: 179 RTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLVPLV 238
P + +TG I + + +T I+ +++ +LL ++S + +P+V
Sbjct: 145 ----PDDLTAYITGASLINQDFAHSSEEGLKKTEVITVCLIIGLLLIVFRSVVTPFIPIV 200
Query: 239 PLIFGVVMTLGFMGLLGIPLDIATTT-----VGAMIIGMGIDYGVHVTNRYYEERGKGKS 293
+ F +++ +G+L +D +T + A++ G+G DY + + R+ EE G
Sbjct: 201 VVGFSYLISQSILGILVYNVDFPISTFTQTFLVAILFGIGTDYCILLLTRFREELANGHD 260
Query: 294 LEEAAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVT 353
+EAA A GK L + + GF AL + ++ + +V + +G+G+ + +
Sbjct: 261 KKEAALIAYRTGGKTLFISGFAVLIGFSALGFAKF-AIFQSAVGVAVGVGILMIILYTLL 319
Query: 354 PALAILEEEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLIALIIS-GVS 412
P + E + K++++ K +++ LG+ P+ ++I ++I+
Sbjct: 320 PLFMVTLGE--KLFWPSKKVLSHSDNK-----LWAFLGRHSVARPFLFIVITVVITLPFI 372
Query: 413 LYGASKITTEVRLEKMIPTDLPEIQALSDIRSEFGGQDEVTILIKADDVRDPTLVRDILR 472
L +I+ + E I +D I+AL I+ FG I + +D T I
Sbjct: 373 LTYDDQISFDSTAE--ISSDYKSIKALEAIKDGFGEGKAFPINVVVKGDKDLTTADTIPY 430
Query: 473 FEREIKADSYINNVFETQSIADVVIQKYG--YIPQDKEKISEAIE 515
KA +++V +I +K YI +S+ ++
Sbjct: 431 LGNISKAIEKVDHVDSVMTITQPTGKKIKDLYIDNQLGSVSDGLD 475
>emb|CAB86119.1| (AL163003) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
Length = 743
Score = 73.4 bits (177), Expect = 9e-12
Identities = 61/248 (24%), Positives = 112/248 (44%), Gaps = 8/248 (3%)
Query: 218 IVVLILLYFYKSPIRMLVPLVPLIFGVVMTLGFMGLLGIPLDI---ATTTVGAMIIGMGI 274
+ +L+LL+ + S + L+PL + +V T + LLG I AT A+ +G+GI
Sbjct: 186 LTLLLLLFVFGSVVSALLPLAIGLIAIVGTFAELFLLGSVASISITATNLTTALGLGLGI 245
Query: 275 DYGVHVTNRYYEERGKGKSLEEAAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRL 334
DY + + +R+ E+ KG S+++A + G+ + +A T AL + L+
Sbjct: 246 DYALLMVSRFREQLAKGASVDDAVRHTVHTAGRTVAFSAATVAVALAALLVFPQYFLRSF 305
Query: 335 SVSLVMGLGLAALNAVIVTPALAILEEEFREKVMKKKEIIAIGGGKSKISFIFSMLGKAI 394
+ V + +AA++ + V PAL + K S++ F + A+
Sbjct: 306 GYAGVGVVAIAAVSTLFVMPALLNVLGHRVNKGRLPWAGRTERHDDSRVPFWGRLARTAM 365
Query: 395 KRSPWTAL--LIALIISGVSLYGASKITTEVRLEKMIPTDLPEIQALSDIRSEFGGQDEV 452
+R TAL L L+++ L G I+ + E+ +P D Q + + F G D
Sbjct: 366 RRPALTALPVLAVLLLAASPLLG---ISIGIADERSLPEDAASRQVSARLAENFNGSDAA 422
Query: 453 TILIKADD 460
+ + D+
Sbjct: 423 AVHVVMDE 430
>sp|P95211|MML1_MYCTU PUTATIVE MEMBRANE PROTEIN MMPL1 >gi|7478394|pir||A70634 probable
mmpL1 protein - Mycobacterium tuberculosis (strain
H37RV) >gi|1817718|emb|CAB06593.1| (Z84725) mmpL1
[Mycobacterium tuberculosis]
Length = 958
Score = 71.8 bits (173), Expect = 3e-11
Identities = 79/391 (20%), Positives = 151/391 (38%), Gaps = 34/391 (8%)
Query: 117 ILGRLPKNMDEVKFVLNML-PPEARNGLISGDYSSTIIIVNLNREKNQKALVRVYNDIER 175
++ +L ++ V+ + N P G S D + + +NL ++ ++R
Sbjct: 101 LVTKLSQDTTHVQHIENFWGDPLTAAGSQSADGKAAYVQLNLTGDQGGSQANESVAAVQR 160
Query: 176 EIERTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRMLV 235
++ P G++ +TG + + ++ IS ++ ++L Y+S L+
Sbjct: 161 IVDSVPPPPGIKAYVTGPGPLGADRVVYGDRSLHTITGISIAVIAIMLFIAYRSLSAALI 220
Query: 236 PLVPL------IFGVVMTLGFMGLLGIPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERG 289
L+ + + G++ T L+G+ V A+ I DY + + RY E R
Sbjct: 221 MLLTVGLELLAVRGIISTFAVNDLMGLSTFTVNVLV-ALTIAASTDYIIFLVGRYQEARA 279
Query: 290 KGKSLEEAAEEAIAETGKALLGAALTTIAGFLALSISILPSLKRLSVSLVMGLGLAALNA 349
G++ E A T +L + LT L + LP L+ +GL L +
Sbjct: 280 TGQNREAAYYTMFGGTAHVVLASGLTVAGAMYCLGFTRLPYFNTLASPCAIGLVTVMLAS 339
Query: 350 VIVTPALAILEEEF-----REKVMKKKEIIAIGGGKSKISFIFSMLGKAIKRSPWTALLI 404
+ + PA+ + F + K++ + +G + R P L
Sbjct: 340 LTLAPAIIAVASRFGLFDPKRATTKRR---------------WRRIGTVVVRWPGPVLAA 384
Query: 405 ALIISGVSLYGASKITTEVRLEKMIPTDLPEI--QALSDIRSEFGGQDEVTILIKAD-DV 461
L+I+ + L K T IP+ P SD + ++++AD D+
Sbjct: 385 TLLIALIGLLALPKYQTNYNERYYIPSAAPSNIGYLASDRHFPQARMEPEVLMVEADHDL 444
Query: 462 RDPTLVRDILRFEREIKADSYINNVFETQSI 492
R+PT D+L +R K + + QSI
Sbjct: 445 RNPT---DMLILDRIAKTVFHTPGIARVQSI 472
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.140 0.384
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 248335531
Number of Sequences: 2977
Number of extensions: 10391870
Number of successful extensions: 31594
Number of sequences better than 1.0e-10: 34
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 31386
Number of HSP's gapped (non-prelim): 111
length of query: 746
length of database: 189,106,746
effective HSP length: 60
effective length of query: 686
effective length of database: 153,197,526
effective search space: 105093502836
effective search space used: 105093502836
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 168 (69.9 bits)