BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1125 (PAB1125) DE:Hypothetical protein
(187 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75022 hypothetical protein PAB1125 - Pyrococcus abyssi (st... 376 e-103
pir||E71209 probable maf protein - Pyrococcus horikoshii >gi|325... 286 1e-76
dbj|BAB06752.1| (AP001517) septum formation [Bacillus halodurans] 149 2e-35
sp|Q02169|MAF_BACSU MAF PROTEIN >gi|322192|pir||A45239 septum fo... 143 2e-33
pir||E75424 maf protein - Deinococcus radiodurans (strain R1) >g... 139 2e-32
pir||C70448 MAF protein - Aquifex aeolicus >gi|2984026|gb|AAC075... 138 5e-32
pir||G72239 maf protein - Thermotoga maritima (strain MSB8) >gi|... 135 4e-31
gi|4757794 acetylserotonin O-methyltransferase-like; acetylserot... 134 9e-31
pir||C82325 maf protein VC0418 [imported] - Vibrio cholerae (gro... 121 5e-27
sp|P25536|YHDE_ECOLI PROTEIN YHDE >gi|78509|pir||JQ1271 hypothet... 119 3e-26
gb|AAA58051.1| (U18997) ORF_f217; orfE of ECMRED, uses 2nd start... 119 3e-26
pir||C81181 Maf/YceF/YhdE family protein NMB0598 [imported] - Ne... 118 4e-26
pir||B81925 hypothetical protein NMA0802 [imported] - Neisseria ... 117 1e-25
emb|CAA75676.1| (Y15521) start position 2 [Homo sapiens] 113 1e-24
pir||H83086 conserved hypothetical protein PA4478 [imported] - P... 110 1e-23
pir||H71642 maf protein (maf) RP815 - Rickettsia prowazekii >gi|... 110 1e-23
pir||T38722 hypothetical conserved protein - fission yeast (Sch... 107 8e-23
pir||H81681 maf protein TC0628 [imported] - Chlamydia muridarum ... 107 8e-23
sp|P27244|YCEF_ECOLI HYPOTHETICAL 23.2 KDA PROTEIN IN RNE-RPMF I... 106 1e-22
pir||F71525 hypothetical protein CT349 - Chlamydia trachomatis (... 106 2e-22
pir||D72129 maf protein CP0754 [imported] - Chlamydophila pneumo... 97 2e-19
emb|CAB95539.1| (AL359782) possible hypothetical 21.1 Kd protein... 92 4e-18
pir||A82721 conserved hypothetical protein XF1124 [imported] - X... 92 5e-18
pir||D83273 conserved hypothetical protein PA2972 [imported] - P... 87 1e-16
gb|AAF52722.1| (AE003623) CG9515 gene product [Drosophila melano... 87 2e-16
pir||T20235 hypothetical protein C54G4.6 - Caenorhabditis elegan... 81 1e-14
pir||S76166 hypothetical protein - Synechocystis sp. (strain PCC... 76 3e-13
gi|6324685 Yor111wp [Saccharomyces cerevisiae] >gi|2132059|pir||... 75 8e-13
pir||D81396 MAF homolog Cj0507 [imported] - Campylobacter jejuni... 74 1e-12
gb|AAA85927.1| (U00012) u1308r; B1308_C2_167 [Mycobacterium leprae] 73 2e-12
pir||F82126 Maf/YceF/YhdE family protein VC2027 [imported] - Vib... 70 2e-11
>pir||G75022 hypothetical protein PAB1125 - Pyrococcus abyssi (strain Orsay)
>gi|5459135|emb|CAB50621.1| (AJ248288) hypothetical
protein [Pyrococcus abyssi]
Length = 187
Score = 376 bits (955), Expect = e-103
Identities = 187/187 (100%), Positives = 187/187 (100%)
Query: 1 MIILASSSPRRREILGKFFDIKVYPSEIDERSNARSPKERALDLARKKALAVHSRFPNDT 60
MIILASSSPRRREILGKFFDIKVYPSEIDERSNARSPKERALDLARKKALAVHSRFPNDT
Sbjct: 1 MIILASSSPRRREILGKFFDIKVYPSEIDERSNARSPKERALDLARKKALAVHSRFPNDT 60
Query: 61 IVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEETKVK 120
IVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEETKVK
Sbjct: 61 IVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEETKVK 120
Query: 121 FRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELIKLG 180
FRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELIKLG
Sbjct: 121 FRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELIKLG 180
Query: 181 FKPRPKR 187
FKPRPKR
Sbjct: 181 FKPRPKR 187
>pir||E71209 probable maf protein - Pyrococcus horikoshii
>gi|3258385|dbj|BAA31068.1| (AP000007) 186aa long
hypothetical maf protein [Pyrococcus horikoshii]
Length = 186
Score = 286 bits (724), Expect = 1e-76
Identities = 132/184 (71%), Positives = 161/184 (86%)
Query: 1 MIILASSSPRRREILGKFFDIKVYPSEIDERSNARSPKERALDLARKKALAVHSRFPNDT 60
MIILASSSPRRREILG+FF+IKVYP+ ++ERS + +E++LD+ARKKAL+V S+FP T
Sbjct: 2 MIILASSSPRRREILGRFFEIKVYPANVEERSTVKDSREKSLDIARKKALSVSSKFPGAT 61
Query: 61 IVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEETKVK 120
IVAADT+V+ G+ LGKP++ EAR ML LSG VH VITGYCIIHNG+++ GVEET+VK
Sbjct: 62 IVAADTMVIFRGKTLGKPRNAEEARKMLRALSGNVHKVITGYCIIHNGRIIEGVEETEVK 121
Query: 121 FRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELIKLG 180
FR + ++L+EWY+ST EWKDKAG+YGIQGYASIFVEWI+GDYYNVVGLPIKVVVEL KLG
Sbjct: 122 FREIGDELLEWYISTGEWKDKAGAYGIQGYASIFVEWIKGDYYNVVGLPIKVVVELTKLG 181
Query: 181 FKPR 184
FKP+
Sbjct: 182 FKPK 185
>dbj|BAB06752.1| (AP001517) septum formation [Bacillus halodurans]
Length = 190
Score = 149 bits (372), Expect = 2e-35
Identities = 86/186 (46%), Positives = 119/186 (63%), Gaps = 3/186 (1%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDERSNARSPKERALD-LARKKALAVHSRFPND 59
+ILAS SPRR+++L + V S IDE + P + + LAR+KA V + +
Sbjct: 4 LILASGSPRRKQLLEQMNVPFTVCKSTIDETFDPTFPPDEVVQQLARQKAQDVAKKHEDS 63
Query: 60 TIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEETKV 119
I+AADTIVV G +LGKP +E+EAR ML +LS + H V+TG ++H G+V VE T+V
Sbjct: 64 FILAADTIVVFQGRILGKPATEQEARQMLSQLSDQSHEVLTGVALLHQGQVETFVETTEV 123
Query: 120 KFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELIKL 179
+F L++ IE YL T E DKAG+YGIQG + V+ ++GDYYNVVGLP+ V +K+
Sbjct: 124 RFWPLTDTEIETYLQTGEPFDKAGAYGIQGLGAYLVKELKGDYYNVVGLPLSRTVRALKV 183
Query: 180 -GFKPR 184
GF R
Sbjct: 184 HGFSTR 189
>sp|Q02169|MAF_BACSU MAF PROTEIN >gi|322192|pir||A45239 septum formation maf - Bacillus
subtilis >gi|9256957|pdb|1EX2|A Chain A, Crystal
Structure Of Bacillus Subtilis Maf Protein
>gi|9256958|pdb|1EX2|B Chain B, Crystal Structure Of
Bacillus Subtilis Maf Protein >gi|9257108|pdb|1EXC|A
Chain A, Crystal Structure Of B. Subtilis Maf Protein
Complexed With D-(Utp) >gi|9257109|pdb|1EXC|B Chain B,
Crystal Structure Of B. Subtilis Maf Protein Complexed
With D-(Utp) >gi|142853|gb|AAA22395.1| (M96343)
homologous to unidentified E. coli protein [Bacillus
subtilis] >gi|143161|gb|AAA22582.1| (L08793) maf
[Bacillus subtilis] >gi|2635270|emb|CAB14765.1| (Z99118)
maf [Bacillus subtilis]
Length = 189
Score = 143 bits (356), Expect = 2e-33
Identities = 80/179 (44%), Positives = 114/179 (62%), Gaps = 2/179 (1%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDERSNAR-SPKERALDLARKKALAVHSRFPND 59
+ILAS SPRR+E+L + SE++E+ N SP+E LA++KA AV P+
Sbjct: 5 LILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHA 64
Query: 60 TIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEETKV 119
++ ADT+V LDGE LGKP+ + EA ML +LSG+ HSVIT I ++T+V
Sbjct: 65 IVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQAENHSETFYDKTEV 124
Query: 120 KFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELIK 178
F +LSE+ I Y+ T+E DKAG+YGIQG ++FV+ I GDYY+V+GLPI + ++
Sbjct: 125 AFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGDYYSVMGLPISKTMRALR 183
>pir||E75424 maf protein - Deinococcus radiodurans (strain R1)
>gi|6458946|gb|AAF10776.1|AE001969_5 (AE001969) maf
protein [Deinococcus radiodurans]
Length = 195
Score = 139 bits (347), Expect = 2e-32
Identities = 76/178 (42%), Positives = 103/178 (57%), Gaps = 1/178 (0%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDERSNARSPKERALDLARKKALAVHSRFPNDT 60
+ILAS SPRRRE+LG +V S E S P AL+L + KA AV ++ P+
Sbjct: 9 VILASGSPRRRELLGNLGVPFEVVVSGEAEDSQETDPARLALELGQLKARAVAAQHPDAV 68
Query: 61 IVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEETKVK 120
++AADT+V L G +L KP E E L + SGK V TG C+I GVE T V
Sbjct: 69 VIAADTVVALGGTLLAKPADEAENAAFLRQQSGKTQQVYTGVCVISPAGEQSGVERTDVT 128
Query: 121 FRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELIK 178
FR L+E + +Y + E DKAG YGIQG +E ++GDY N+VG P+ +V+ L++
Sbjct: 129 FRALTEAEVTFYARSGEGLDKAGGYGIQGVGMALIERVEGDYSNIVGFPLALVLRLLR 186
>pir||C70448 MAF protein - Aquifex aeolicus >gi|2984026|gb|AAC07569.1|
(AE000752) MAF protein [Aquifex aeolicus]
Length = 190
Score = 138 bits (344), Expect = 5e-32
Identities = 74/178 (41%), Positives = 115/178 (64%), Gaps = 1/178 (0%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDERSNARSPKERALDLARKKALAVHSRFPNDT 60
+ILAS+SPRR +IL + +V P++++E P A LA++KAL+V +
Sbjct: 3 VILASTSPRRSQILSLLGIEFEVIPAKVEEEVIPGKPVLTARKLAKEKALSVWRENRDAV 62
Query: 61 IVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEETKVK 120
++ ADT+V L E++GKPK E++A +L+KLSGK HSV+T C+ KV + KVK
Sbjct: 63 VIGADTLVFLGNEIIGKPKDEKDAVNILKKLSGKWHSVVTALCVYSPEKVFLTHDIAKVK 122
Query: 121 FRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELIK 178
FR LS++ I Y+ + E DKAG+YG+QG+ + VE I G++Y V+GLPI + ++++
Sbjct: 123 FRELSKEEIISYVKSGEPMDKAGAYGVQGFGATIVERIHGNFYTVMGLPIVKLYKILR 180
>pir||G72239 maf protein - Thermotoga maritima (strain MSB8)
>gi|4982123|gb|AAD36622.1|AE001801_9 (AE001801) maf
protein [Thermotoga maritima]
Length = 204
Score = 135 bits (336), Expect = 4e-31
Identities = 79/177 (44%), Positives = 115/177 (64%), Gaps = 8/177 (4%)
Query: 2 IILASSSPRRR---EILGKFFDIKVYPSEIDERSNARSPKERALDLARKKALAVHSRFPN 58
IILASSSPRRR E+LG F+++ +++E SP+E +L+ +KA V +
Sbjct: 3 IILASSSPRRRQLMELLGIEFEVE--KPDVEEEF-LESPEETVRELSLRKAEWVFKKRKE 59
Query: 59 DTI--VAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEE 116
+ I + +DT+VVLDG +LGKP+S EA+ ML+KLSGK H V TG + + V
Sbjct: 60 EEILVIGSDTVVVLDGNILGKPESLEEAKGMLKKLSGKWHVVYTGVAFVSSETKDVIVSS 119
Query: 117 TKVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVV 173
TKV+FR L E +I++Y+ DKAG+YGIQ +A++FVE I+GD++ VVG P+ +V
Sbjct: 120 TKVRFRELPESVIDYYVEKYRPLDKAGAYGIQDFAAVFVEKIEGDFFTVVGFPLGMV 176
>gi|4757794 acetylserotonin O-methyltransferase-like; acetylserotonin
N-methyltransferase-like [Homo sapiens]
>gi|3808148|emb|CAA75675.1| (Y15521) start position 1
[Homo sapiens]
Length = 629
Score = 134 bits (333), Expect = 9e-31
Identities = 83/204 (40%), Positives = 120/204 (58%), Gaps = 19/204 (9%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDERSNARS---PKERALDLARKKALAVHSRFP 57
++LAS+SPRR+EIL +V PS+ E+ + S P A++ A++KAL V +R
Sbjct: 15 VVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKASFATPYGYAMETAKQKALEVANRLY 74
Query: 58 N------DTIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIH----- 106
D ++ ADTIV + G +L KP +++A ML +LSG+ HSV TG I+H
Sbjct: 75 QKDLRAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSSKD 134
Query: 107 ---NGKVVGGVEETKVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYY 163
+ +V EETKVKF LSE+L+ Y+ + E DKAG YGIQ + VE + GD+
Sbjct: 135 HQLDTRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFL 194
Query: 164 NVVGLPIK-VVVELIKLGFKPRPK 186
NVVG P+ +L+KL + PRP+
Sbjct: 195 NVVGFPLNHFCKQLVKLYYPPRPE 218
>pir||C82325 maf protein VC0418 [imported] - Vibrio cholerae (group O1 strain
N16961) >gi|9654840|gb|AAF93591.1| (AE004129) maf
protein [Vibrio cholerae]
Length = 205
Score = 121 bits (301), Expect = 5e-27
Identities = 78/180 (43%), Positives = 108/180 (59%), Gaps = 5/180 (2%)
Query: 2 IILASSSPRRREILGKF---FDIKVYPSEIDERSNARSPKERALDLARKKALAVHSRFPN 58
++LAS SPRRRE+L + F++ V P+ ++R+ A SP + L+R KALA +
Sbjct: 24 LVLASGSPRRRELLAQMGYQFEV-VVPNVEEKRAAAESPAQYVERLSRDKALAGAALVAA 82
Query: 59 DTIV-AADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEET 117
+ +V +DTIVV D +VL KP+ +A+ ML KLSG H V+TG + G V T
Sbjct: 83 EAVVIGSDTIVVKDQQVLEKPRDFADAKRMLLKLSGSQHQVMTGVSVTCRGITHSVVVTT 142
Query: 118 KVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELI 177
+V F+ LSE IE Y + E DKAGSYGIQG FV I+G Y+ VVGLP+ +L+
Sbjct: 143 EVWFKTLSEQEIEAYWQSGEPCDKAGSYGIQGLGGRFVTRIEGSYHAVVGLPLYETDQLL 202
>sp|P25536|YHDE_ECOLI PROTEIN YHDE >gi|78509|pir||JQ1271 hypothetical 21.5K protein
(cafA-mreD intergenic region) - Escherichia coli
>gi|48825|emb|CAA40456.1| (X57166) orfE [Escherichia
coli] >gi|1789646|gb|AAC76280.1| (AE000404) orf,
hypothetical protein [Escherichia coli K12]
Length = 197
Score = 119 bits (295), Expect = 3e-26
Identities = 76/190 (40%), Positives = 111/190 (58%), Gaps = 5/190 (2%)
Query: 2 IILASSSPRRREIL---GKFFDIKVYPSEIDERSNARSPKERALDLARKKALAVHSRFPN 58
+ LAS SPRR+E+L G F+ V E ++R S ++ + LAR+KA A ++
Sbjct: 4 LYLASGSPRRQELLAQLGVTFERIVTGIE-EQRQPQESAQQYVVRLAREKARAGVAQTAK 62
Query: 59 DT-IVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEET 117
D ++ ADTIV+L+GEVL KP+ A ML KLSG+ H V+T + + ++ + T
Sbjct: 63 DLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLVVT 122
Query: 118 KVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELI 177
V FR L+++ I Y++++E DKAG+YGIQG FV I G Y+ VVGLP+ EL+
Sbjct: 123 DVTFRTLTDEDIAGYVASDEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYELL 182
Query: 178 KLGFKPRPKR 187
R KR
Sbjct: 183 SNFNALREKR 192
>gb|AAA58051.1| (U18997) ORF_f217; orfE of ECMRED, uses 2nd start [Escherichia
coli]
Length = 217
Score = 119 bits (295), Expect = 3e-26
Identities = 76/190 (40%), Positives = 111/190 (58%), Gaps = 5/190 (2%)
Query: 2 IILASSSPRRREIL---GKFFDIKVYPSEIDERSNARSPKERALDLARKKALAVHSRFPN 58
+ LAS SPRR+E+L G F+ V E ++R S ++ + LAR+KA A ++
Sbjct: 24 LYLASGSPRRQELLAQLGVTFERIVTGIE-EQRQPQESAQQYVVRLAREKARAGVAQTAK 82
Query: 59 DT-IVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEET 117
D ++ ADTIV+L+GEVL KP+ A ML KLSG+ H V+T + + ++ + T
Sbjct: 83 DLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLVVT 142
Query: 118 KVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELI 177
V FR L+++ I Y++++E DKAG+YGIQG FV I G Y+ VVGLP+ EL+
Sbjct: 143 DVTFRTLTDEDIAGYVASDEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYELL 202
Query: 178 KLGFKPRPKR 187
R KR
Sbjct: 203 SNFNALREKR 212
>pir||C81181 Maf/YceF/YhdE family protein NMB0598 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7225828|gb|AAF41026.1| (AE002415) Maf/YceF/YhdE
family protein [Neisseria meningitidis MC58]
Length = 202
Score = 118 bits (293), Expect = 4e-26
Identities = 69/191 (36%), Positives = 110/191 (57%), Gaps = 10/191 (5%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDERSNARSPK----ERALDLARKKALAV---- 52
+ L S+SPRR EIL + + + P+ IDE A +R + + AL +
Sbjct: 4 LYLGSNSPRRMEILTQLGYRVIQLPAGIDESVKAGETPFAYVQRMAEEKNRTALTLFCET 63
Query: 53 HSRFPNDTIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVG 112
+ P+ ++ ADT VV DG +LGKP+S+ EA L +LSGK H+V+T CI + GK
Sbjct: 64 NGTMPDFPLITADTCVVSDGIILGKPRSQAEAIEFLNRLSGKQHTVLTAVCIHYRGKTSS 123
Query: 113 GVEETKVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKV 172
V+ +V F+ LS + I Y+ + E DKAG+Y +QG IF++ I+G + ++GLP+
Sbjct: 124 RVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQGIGGIFIQSIEGSFSGIMGLPVYE 183
Query: 173 VVELIK-LGFK 182
V +++ LG++
Sbjct: 184 TVSMLQDLGYR 194
>pir||B81925 hypothetical protein NMA0802 [imported] - Neisseria meningitidis
(group A strain Z2491) >gi|7379522|emb|CAB84085.1|
(AL162754) hypothetical protein NMA0802 [Neisseria
meningitidis Z2491]
Length = 201
Score = 117 bits (290), Expect = 1e-25
Identities = 70/194 (36%), Positives = 111/194 (57%), Gaps = 10/194 (5%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDE--RSNARSPK--ERALDLARKKALAV---- 52
+ L S+SPRR EIL + + + P+ IDE R N + +R + + AL +
Sbjct: 4 LYLGSNSPRRMEILTQLGYQVVKLPANIDETVRQNEDPARYVQRMAEEKNRTALTLFCET 63
Query: 53 HSRFPNDTIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVG 112
+ P+ ++ ADT VV G +LGKP S+ EA L +LSGK H+V+T CI + G
Sbjct: 64 NGTMPDFPLITADTCVVSAGIILGKPHSQAEAIEFLNRLSGKQHTVLTAVCIHYRGNAEN 123
Query: 113 GVEETKVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKV 172
V+ +V F+ LS + I Y+ + E DKAG+Y +QG SIF++ I+G + ++GLP+
Sbjct: 124 RVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQGIGSIFIQSIEGSFSGIMGLPVYE 183
Query: 173 VVELIK-LGFKPRP 185
V +++ LG++ P
Sbjct: 184 TVSMLQDLGYRTPP 197
>emb|CAA75676.1| (Y15521) start position 2 [Homo sapiens]
Length = 571
Score = 113 bits (281), Expect = 1e-24
Identities = 66/160 (41%), Positives = 95/160 (59%), Gaps = 15/160 (9%)
Query: 42 LDLARKKALAVHSRFPN------DTIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKV 95
++ A++KAL V +R D ++ ADTIV + G +L KP +++A ML +LSG+
Sbjct: 1 METAKQKALEVANRLYQKDLRAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGRE 60
Query: 96 HSVITGYCIIH--------NGKVVGGVEETKVKFRNLSEDLIEWYLSTEEWKDKAGSYGI 147
HSV TG I+H + +V EETKVKF LSE+L+ Y+ + E DKAG YGI
Sbjct: 61 HSVFTGVAIVHCSSKDHQLDTRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGI 120
Query: 148 QGYASIFVEWIQGDYYNVVGLPIK-VVVELIKLGFKPRPK 186
Q + VE + GD+ NVVG P+ +L+KL + PRP+
Sbjct: 121 QALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYYPPRPE 160
>pir||H83086 conserved hypothetical protein PA4478 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9950715|gb|AAG07866.1|AE004861_7 (AE004861)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 201
Score = 110 bits (273), Expect = 1e-23
Identities = 71/183 (38%), Positives = 100/183 (53%), Gaps = 6/183 (3%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDERSNAR-SPKERALDLARKKALA----VHSR 55
+ LAS+SPRRRE+L + + V + IDE +P LAR KA A + R
Sbjct: 4 LYLASASPRRRELLTQIGVPLSVLVTAIDESPLPNEAPAAYVERLARGKAAAGLAMLEGR 63
Query: 56 FPNDTIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVE 115
+ ++ ADT VV+DG +LGKP + + ML LSG+ H V+T + G V V
Sbjct: 64 GEDGCVLGADTSVVIDGRILGKPVDQADGLAMLAALSGREHQVLTAVALAAAGGVEARVV 123
Query: 116 ETKVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVE 175
E +V+FR ++ + Y + E DKAG Y IQG +IFV I+G Y VVGLP+ E
Sbjct: 124 ECRVRFRQVAPEEALRYWQSGEPADKAGGYAIQGLGAIFVSRIEGSYSAVVGLPLCETAE 183
Query: 176 LIK 178
L++
Sbjct: 184 LLR 186
>pir||H71642 maf protein (maf) RP815 - Rickettsia prowazekii
>gi|3861341|emb|CAA15240.1| (AJ235273) MAF PROTEIN (maf)
[Rickettsia prowazekii]
Length = 222
Score = 110 bits (272), Expect = 1e-23
Identities = 73/190 (38%), Positives = 108/190 (56%), Gaps = 9/190 (4%)
Query: 2 IILASSSPRRREILG--KFFDIKVYPSEIDERSNARS-PKERALDLARKKALAVHSRFPN 58
IILAS S R E+L K ++ P+ IDE N R P A+ LA +KA+ V S+
Sbjct: 10 IILASGSLARVELLDRIKIIPTQIIPAYIDETPNLRELPAPLAIRLAYEKAIKVASQIET 69
Query: 59 DTIV-AADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCII--HNGKVV--GG 113
+I+ AADT+ + +L K + E + ++ +SG+ H V TG CII N ++
Sbjct: 70 SSIIIAADTVTAVGRRILPKATTYEEVKHCIKMVSGRRHRVYTGLCIIKKENNQLTFRQK 129
Query: 114 VEETKVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPI-KV 172
+ +T +KF+ LS++ I +Y S +E DKAG I GYA FV +I G Y N++GLP+ +
Sbjct: 130 IVQTIIKFKKLSDEEINFYSSLDEGIDKAGGCKISGYAEAFVSFISGSYSNIMGLPLFET 189
Query: 173 VVELIKLGFK 182
V L LGF+
Sbjct: 190 VNALTSLGFR 199
>pir||T38722 hypothetical conserved protein - fission yeast
(Schizosaccharomyces pombe) >gi|2408075|emb|CAB16279.1|
(Z99167) conserved hypothetical protein
[Schizosaccharomyces pombe]
Length = 236
Score = 107 bits (265), Expect = 8e-23
Identities = 73/198 (36%), Positives = 114/198 (56%), Gaps = 21/198 (10%)
Query: 2 IILASSSPRRREILGK--FFDIKVYPSEIDERSNAR---SPKERALDLARKKALAVHSRF 56
IILAS SPRR+++ + F +++ S E N +P E A D + +KA+AV+ +
Sbjct: 27 IILASGSPRRKQLFEQMGFPNVETCVSGFPEDLNKSMYITPWEYAADTSVQKAIAVYEKL 86
Query: 57 PN-----DTIVAADTIVVLDGEVLGKPKSEREARVMLEKL--SGKVHSVITGYCII---- 105
D +V+ADTI++LD E++ KP + ML+KL S H V T +I
Sbjct: 87 AAEEDSPDIVVSADTILILDSEIMEKPNDPKHHLAMLKKLRNSKTPHKVFTAVSVIVPME 146
Query: 106 ---HNGKVVGG-VEETKVKFR-NLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQG 160
H G V+ +EET+VKF +++++ +E Y+ E DKAG Y IQG+ ++ +E I G
Sbjct: 147 VPIHPGYVMKTHLEETQVKFDPSITDEFLEAYVRCGEGSDKAGGYAIQGHGALLIESIIG 206
Query: 161 DYYNVVGLPIKVVVELIK 178
D+ NVVGLPI+ +L++
Sbjct: 207 DFSNVVGLPIRATFKLME 224
>pir||H81681 maf protein TC0628 [imported] - Chlamydia muridarum (strain Nigg)
>gi|7190666|gb|AAF39457.1| (AE002331) maf protein
[Chlamydia muridarum]
Length = 196
Score = 107 bits (265), Expect = 8e-23
Identities = 68/180 (37%), Positives = 98/180 (53%), Gaps = 4/180 (2%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDERSNARS--PKERALDLARKKALAVHSR-FP 57
++L SSS R+ +L F S+ DERS S P E +LA KA AV S+ F
Sbjct: 5 LVLGSSSKIRKAVLEAFRIPFICVSSDFDERSITYSGDPFEYTRELAWNKANAVRSQGFS 64
Query: 58 NDTIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEET 117
+ I+ ADT+VV +GEV KP+SE A ML LSG HSVIT ++ N KV E T
Sbjct: 65 DSLIITADTVVVYEGEVFNKPESEEHAVEMLRTLSGTSHSVITSLVLMQNEKVASASETT 124
Query: 118 KVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELI 177
+V F ++ ++ Y+ + G Y +Q + ++ I+G YN+ GLPIK + +L+
Sbjct: 125 QVSFIDIPPQHLKTYVQAFSSLKRCGGYCVQDGGGLIIKQIEGCVYNIQGLPIKTLNQLL 184
>sp|P27244|YCEF_ECOLI HYPOTHETICAL 23.2 KDA PROTEIN IN RNE-RPMF INTERGENIC REGION (ORFY)
>gi|7449828|pir||D64852 yceF protein - Escherichia coli
>gi|146051|gb|AAA23829.1| (M96791) orfY [Escherichia
coli] >gi|1787328|gb|AAC74171.1| (AE000209) orf,
hypothetical protein [Escherichia coli K12]
>gi|4062661|dbj|BAA35895.1| (D90744) Hypothetical 23.2
kd protein in rne-rpmF intergenic region (orfy).
[Escherichia coli]
Length = 207
Score = 106 bits (263), Expect = 1e-22
Identities = 66/182 (36%), Positives = 106/182 (57%), Gaps = 5/182 (2%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDERSNA-RSPKERALDLARKKALAVHSRFPND 59
+ILAS+SP RR +L K + E+DE + SP++ L LA++KA ++ SR+P+
Sbjct: 17 LILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDH 76
Query: 60 TIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIH--NGKVVGGVEET 117
I+ +D + VLDGE+ GKP +E AR+ L K SG + + TG + + NG + VE
Sbjct: 77 LIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPF 136
Query: 118 KVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQG-DYYNVVGLPIKVVVEL 176
V FR+LSE I+ Y+ E AGS+ +G+ E ++G D +VGLP+ + ++
Sbjct: 137 DVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIALCQM 196
Query: 177 IK 178
++
Sbjct: 197 LR 198
>pir||F71525 hypothetical protein CT349 - Chlamydia trachomatis (serotype D,
strain UW3/Cx) >gi|3328770|gb|AAC67944.1| (AE001308)
Maf-type protein [Chlamydia trachomatis]
Length = 196
Score = 106 bits (261), Expect = 2e-22
Identities = 67/180 (37%), Positives = 98/180 (54%), Gaps = 4/180 (2%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDERSNARS--PKERALDLARKKALAVHSR-FP 57
++L SSS RR+ +L F + DERS S P E +LA KA V S+ F
Sbjct: 5 LVLGSSSERRKAVLESFRIPFICVSPDFDERSIVYSGDPFEYTKELAWNKANVVRSQGFS 64
Query: 58 NDTIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEET 117
+ I+ ADT+VV GEV KP+SE A ML LSG HSVIT ++ N KV+ E T
Sbjct: 65 DALIITADTVVVYKGEVFNKPESEEHAVEMLRTLSGSSHSVITTLVLMQNEKVLSASENT 124
Query: 118 KVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELI 177
+V F ++ ++ Y+ + + G Y +Q + ++ I+G YN+ GLPIK + +L+
Sbjct: 125 QVSFIDIPPQHLKTYVRSFSSLKRCGGYCVQDGGGLIIKQIEGCVYNIQGLPIKTLNQLL 184
>pir||D72129 maf protein CP0754 [imported] - Chlamydophila pneumoniae (strains
CWL029 and AR39) >gi|4376274|gb|AAD18175.1| (AE001587)
Maf-type protein [Chlamydophila pneumoniae CWL029]
>gi|7189669|gb|AAF38557.1| (AE002234) maf protein
[Chlamydophila pneumoniae AR39]
>gi|8978397|dbj|BAA98234.1| (AP002545) Maf-type protein
[Chlamydophila pneumoniae J138]
Length = 196
Score = 96.7 bits (237), Expect = 2e-19
Identities = 62/182 (34%), Positives = 98/182 (53%), Gaps = 6/182 (3%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDER--SNARSPKERALDLARKKALAVHS-RFP 57
++L SSSPRR+ IL KF V PS DE S + P +LA +KA AV P
Sbjct: 5 LVLGSSSPRRKFILEKFRVPFTVIPSNFDESKVSYSGDPIAYTQELAAQKAYAVSELHSP 64
Query: 58 NDTIV-AADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEE 116
D I+ DTIV DG + KP+ + +A ML+ L + H V+T ++H GK++ G E
Sbjct: 65 CDCIILTGDTIVSYDGRIFTKPQDKADAIQMLKTLRNQTHDVVTSIAVLHKGKLLTGSET 124
Query: 117 TKVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVEL 176
+++ + + IE Y+ T + G+Y + + + ++ + G YNV GLPI+ + L
Sbjct: 125 SQISLTMIPDHRIESYIDTVGTLNNCGAYDV-CHGGLILKKVHGCVYNVQGLPIQTLKYL 183
Query: 177 IK 178
++
Sbjct: 184 LE 185
>emb|CAB95539.1| (AL359782) possible hypothetical 21.1 Kd protein. [Trypanosoma
brucei]
Length = 285
Score = 92.1 bits (225), Expect = 4e-18
Identities = 77/225 (34%), Positives = 105/225 (46%), Gaps = 50/225 (22%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDE---RSNARSPKERALDLARKKALAV----- 52
I+LAS+SPRR EIL D+ V PS + E +S + + AL A+ KA +
Sbjct: 48 ILLASASPRRLEILKIIGLDVHVCPSGVAEDLPKSEFKCGGDYALCTAKLKAKHIIRQKM 107
Query: 53 --------------HSRFPNDTIVAADTIVVL-----DG--EVLGKPKSEREARVMLEKL 91
SR P D ++AADT+ + DG +++ KP + EA + +L
Sbjct: 108 EAANSGSGKTQSGSRSRLPFDVLIAADTVSTMPAHEGDGTIDIIEKPSTREEAAATMRRL 167
Query: 92 SGKVHSVITGYCII---------HNGKVVGGVEE----------TKVKFRNLSEDLIEWY 132
SG H + TG I +G V EE T V F LSE I Y
Sbjct: 168 SGNSHEMWTGVAIAVVCGKNSTDDDGGVGDNCEELIRWFELKVCTTVHFAVLSEAEILAY 227
Query: 133 LST-EEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVEL 176
S + W KA YGIQG A+ + I+GDYYNV+GLP++ V L
Sbjct: 228 TSCPDNWAGKAAGYGIQGIAACMIRSIEGDYYNVMGLPLQAVCAL 272
>pir||A82721 conserved hypothetical protein XF1124 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106084|gb|AAF83934.1|AE003948_6 (AE003948)
conserved hypothetical protein [Xylella fastidiosa]
Length = 199
Score = 91.7 bits (224), Expect = 5e-18
Identities = 66/183 (36%), Positives = 96/183 (52%), Gaps = 6/183 (3%)
Query: 1 MIILASSSPRRREILGKF-FDIKVYPSEIDE-RSNARSPKERALDLARKKALAVHSRFPN 58
M+ LAS S RR++L + +V EI E R P++ +A++KA +R +
Sbjct: 11 MLYLASRSLCRRQLLQRLDIPFQVIDLEIPEVRREDELPQDYVRRVAQEKAQVGLARVRD 70
Query: 59 ---DTIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGV- 114
++ ADT VVLDG V GKP EA ML LSG+ H V+T ++ G V V
Sbjct: 71 AFAPKVLGADTEVVLDGRVFGKPADLVEAAAMLAALSGRTHQVMTAVSLVAAGGVAAQVL 130
Query: 115 EETKVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVV 174
++V F LS+ I Y+ + E KAG+Y IQG FV + G Y V+GLP++
Sbjct: 131 VVSEVSFALLSQGQIARYVDSGEPMGKAGAYAIQGRGECFVSRLVGSYSGVMGLPLQQTA 190
Query: 175 ELI 177
+L+
Sbjct: 191 QLL 193
>pir||D83273 conserved hypothetical protein PA2972 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949071|gb|AAG06360.1|AE004723_4 (AE004723)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 192
Score = 87.0 bits (212), Expect = 1e-16
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDERSNA-RSPKERALDLARKKALAVHSRFPND 59
+ILASSSP RRE+L + + +IDE A S +E L+ KA A+ R+P
Sbjct: 4 LILASSSPYRRELLTRLRLPFESASPDIDESHRAGESAEELVRRLSASKAEALAGRYPQH 63
Query: 60 TIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNG--KVVGGVEET 117
++ +D + VLDG +LGKP + A L SGK + +TG ++++ ++
Sbjct: 64 LVIGSDQVAVLDGNILGKPHTPERAIQQLRDASGKSVTFLTGLALLNSASRRIQVACVPF 123
Query: 118 KVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGY-ASIFVEWIQGDYYNVVGLPIKVVVEL 176
V FR+L E I Y+ E D AGS+ +G S+F D ++VGLP+ +V++
Sbjct: 124 TVHFRHLDESRIRRYVEAERPLDCAGSFKAEGLGVSLFRSTEGEDATSLVGLPLIRLVDM 183
Query: 177 I 177
+
Sbjct: 184 L 184
>gb|AAF52722.1| (AE003623) CG9515 gene product [Drosophila melanogaster]
Length = 181
Score = 86.6 bits (211), Expect = 2e-16
Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 10/165 (6%)
Query: 25 PSEIDERSNARSPKERALDL---ARKKALAVHSRF------PNDTIVAADTIVVLDGEVL 75
PS +E N KE + + A KA V+SR N ++AADT+V L E+
Sbjct: 10 PSTFEENLNLEDFKEFSDYIEATALGKAEEVYSRLRSTGDSKNLIVIAADTMVTLGKEIY 69
Query: 76 GKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGVEETKVKFRNLSEDLIEWYLST 135
GKPK +A ML LSG + V TG + H + + V F +L + I+ Y+ +
Sbjct: 70 GKPKDPADAIRMLTNLSGTSNRVFTGVVLKHANGIRKFTDTADVYFGDLLPEQIQSYVDS 129
Query: 136 EEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPI-KVVVELIKL 179
+ DKAG+YG+QG A + I GD+Y V+GLP+ ++ EL KL
Sbjct: 130 GDPLDKAGAYGVQGPAGALIHRIDGDFYCVMGLPLHRLCCELNKL 174
>pir||T20235 hypothetical protein C54G4.6 - Caenorhabditis elegans
>gi|3875257|emb|CAA99818.1| (Z75533) similar to MAF
protein [Caenorhabditis elegans]
Length = 188
Score = 80.8 bits (196), Expect = 1e-14
Identities = 41/116 (35%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Query: 57 PNDTIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHN--GKVVGGV 114
P I+A DT++ +GE++GKP +A+ L++L H+V TG + ++ + +
Sbjct: 60 PYSVIIACDTVIEFNGEIIGKPTDANDAKETLKRLRNNTHNVYTGMALHYHETDQYEEII 119
Query: 115 EETKVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPI 170
E+T V F ++ + +I+ Y+ + E KAGSYGI + ++FV I+G NVVGLP+
Sbjct: 120 EKTIVHFGDIPDRVIDEYVKSGEPLKKAGSYGIGDFGAVFVRGIEGCMPNVVGLPL 175
>pir||S76166 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1653512|dbj|BAA18425.1| (D90914) MAF [Synechocystis
sp.]
Length = 195
Score = 75.7 bits (183), Expect = 3e-13
Identities = 51/184 (27%), Positives = 98/184 (52%), Gaps = 5/184 (2%)
Query: 3 ILASSSPRRREILGKF-FDIKVYPSEIDERSNARSPKERALD-LARKKALAVHSRFPNDT 60
+LAS+SP R+ +L V S DE S A ++ LA+ KA V S+F +
Sbjct: 6 VLASASPARKRLLEMAGISPLVAVSHFDESSLAADNTVALVEALAKAKAGTVASKFADAL 65
Query: 61 IVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIH--NGKVVGGVEETK 118
++ D++++++G+ GKP+S A + + G+V + TG+ +I + + TK
Sbjct: 66 VLGCDSLLLVNGQTYGKPESPAVAIARWQTMRGQVGELYTGHALIDRTQNRCLCQTGLTK 125
Query: 119 VKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVVVELI- 177
V F ++ +D I+ Y+ + E AG++ ++G + + + G NV+GL + ++ L+
Sbjct: 126 VHFADVDDDTIQAYVGSGEPLQCAGAFALEGKGGMLINKLDGCSSNVIGLSLPILRSLLQ 185
Query: 178 KLGF 181
+LG+
Sbjct: 186 RLGY 189
>gi|6324685 Yor111wp [Saccharomyces cerevisiae] >gi|2132059|pir||S60984
hypothetical protein YOR111w - yeast (Saccharomyces
cerevisiae) >gi|1050810|emb|CAA62105.1| (X90518)
putative [Saccharomyces cerevisiae]
>gi|1164956|emb|CAA64031.1| (X94335) YOR3237w
[Saccharomyces cerevisiae] >gi|1420299|emb|CAA99309.1|
(Z75019) ORF YOR111w [Saccharomyces cerevisiae]
Length = 232
Score = 74.5 bits (180), Expect = 8e-13
Identities = 61/198 (30%), Positives = 96/198 (47%), Gaps = 29/198 (14%)
Query: 2 IILASSSPRRREILGKFFDI-------KVYPSEIDERSNARSPKERALDLARKKALAV-- 52
IILAS+SPRR EIL I + +D+ + + P D + KA +
Sbjct: 21 IILASTSPRRYEILHDIMGITDLKTMVSTFEENLDKMNYSTDPIGYVCDTSWHKAQNIIE 80
Query: 53 -----HSRFPNDT-----IVAADTIVV-LDGEVLGKPKSEREARVMLEKL---SGKVHSV 98
PN+ I+ ADTI++ G + KPK++ + L K + +V
Sbjct: 81 ILTDYEDENPNEIDKPKLIICADTIIIDKSGRIYEKPKTKEVQKKFLMKFCYEDDEPVNV 140
Query: 99 ITGYCII-----HNGKVVGGVEETKVKFRN-LSEDLIEWYLSTEEWKDKAGSYGIQGYAS 152
+T +I N ++V +ETKV F N + ++E Y+ + + + G + IQG +
Sbjct: 141 VTAVTLIKWYGRENFELVPFRDETKVYFDNKIPLRILEEYVESGDGLEVGGGFKIQGQGA 200
Query: 153 IFVEWIQGDYYNVVGLPI 170
I +E I+GDYYNVVGLP+
Sbjct: 201 ILIEKIEGDYYNVVGLPL 218
>pir||D81396 MAF homolog Cj0507 [imported] - Campylobacter jejuni (strain NCTC
11168) >gi|6967976|emb|CAB75144.1| (AL139075) MAF
homolog [Campylobacter jejuni]
Length = 183
Score = 73.7 bits (178), Expect = 1e-12
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Query: 1 MIILASSSPRRREILGKF-FDIKVYPSEIDERSNAR-SP----KERALDLARKKALAVHS 54
M+ILASSS R +L D + + DE N SP ++ L+ R+ +
Sbjct: 1 MLILASSSISRANLLKTAKIDFRQVSFDYDENLNKNISPFLYVQKIVLEKERQFLSTLGK 60
Query: 55 RFPNDTIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGV 114
F N ++ AD+IV +D ++L K K ++EA ML +GK S+++ + ++ K V +
Sbjct: 61 DFQNQNLLFADSIVCIDEKILTKAKDKKEAYEMLALQNGKYASILSAFLLVKPEKRVFSL 120
Query: 115 EETKVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYNVVGLPIKVV 173
+T + F+N E+ + Y+ + +K KAG +G+ F+ G+ +GL I+ +
Sbjct: 121 SKTTLYFKNFDENALRDYVENDLYKGKAGCIMCEGFHQNFITQQVGNLSTALGLDIQTL 179
>gb|AAA85927.1| (U00012) u1308r; B1308_C2_167 [Mycobacterium leprae]
Length = 213
Score = 73.4 bits (177), Expect = 2e-12
Identities = 54/193 (27%), Positives = 96/193 (48%), Gaps = 17/193 (8%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDER------SNARSPKERALDLARKKALAV-- 52
++L S+S R ++L + D V S +DE + SP++ LAR KA V
Sbjct: 4 LVLGSASAGRLKVLRQAGIDPLVAASGVDEDLVTAGLGSDTSPRDVVSTLARAKATQVAA 63
Query: 53 ---HSRFPNDTIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIH--N 107
H+ + +++ D+ + +DG + GKP+S AR + ++G+ + TG+C+I N
Sbjct: 64 ALSHAVADDCVVISCDSQLSIDGRLYGKPQSVANARQQWQSMAGRAGQLYTGHCVIRLLN 123
Query: 108 GKVVGGVEETK---VKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYN 164
+ V+ET + F N S + +E YL+ E AG + + G F++ + GD
Sbjct: 124 NETTYSVDETSMTTICFGNPSAEDLEAYLACGESLQVAGGFTLDGLGGWFIDAVYGDPST 183
Query: 165 VVGLPIKVVVELI 177
VVG+ + + L+
Sbjct: 184 VVGIGLPLTRSLL 196
>pir||F82126 Maf/YceF/YhdE family protein VC2027 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9656572|gb|AAF95175.1|
(AE004277) Maf/YceF/YhdE family protein [Vibrio
cholerae]
Length = 193
Score = 69.9 bits (168), Expect = 2e-11
Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 6/182 (3%)
Query: 2 IILASSSPRRREILGKF-FDIKVYPSEIDERSN-ARSPKERALDLARKKALAVHSRFPND 59
++LAS+SP R++IL K + DE +P+ + LA KA + P+
Sbjct: 6 LVLASTSPFRQQILAKLKLPFVTAKPDCDETPLIGETPEHLLMRLAENKARSCFLADPS- 64
Query: 60 TIVAADTIVVLDGEVLGKPKSEREARVMLEKLSGKVHSVITGYCIIHNGKVVGGV--EET 117
++ +D + V+D +++GKP + +A L + SG+ + TG + +N V +
Sbjct: 65 LVIGSDQVCVIDDQIIGKPLTTEKAVEQLLRQSGQAITFYTGLALFNNQTQQTQVLCDTF 124
Query: 118 KVKFRNLSEDLIEWYLSTEEWKDKAGSYGIQGYASIFVEWIQGDYYN-VVGLPIKVVVEL 176
V FR LSE + Y+ E+ AGS+ +G E ++GD N ++GLP+ +++L
Sbjct: 125 TVHFRTLSESMARRYVEAEQPLHCAGSFKSEGLGIALFERLEGDDPNSLIGLPLIKLIQL 184
Query: 177 IK 178
++
Sbjct: 185 LE 186
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.138 0.398
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71487162
Number of Sequences: 2977
Number of extensions: 2946941
Number of successful extensions: 6798
Number of sequences better than 1.0e-10: 31
Number of HSP's better than 0.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6746
Number of HSP's gapped (non-prelim): 31
length of query: 187
length of database: 189,106,746
effective HSP length: 54
effective length of query: 133
effective length of database: 156,788,448
effective search space: 20852863584
effective search space used: 20852863584
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)