BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1131 (nadC-like) DE:Nicotinate phosphoribosyltransferase
related protein
(390 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75023 nicotinate phosphoribosyltransferase related ed prot... 785 0.0
pir||G71199 hypothetical protein PH1868 - Pyrococcus horikoshii ... 733 0.0
gb|AAK40686.1| Nicotinic acid phosphoribosyltransferase, putativ... 406 e-112
gi|11498427 conserved hypothetical protein [Archaeoglobus fulgid... 399 e-110
pir||A72601 hypothetical protein APE1273 - Aeropyrum pernix (str... 367 e-100
emb|CAC12271.1| (AL445066) conserved hypothetical protein [Therm... 353 2e-96
gb|AAG20598.1| (AE005130) Vng2541c [Halobacterium sp. NRC-1] 259 4e-68
pir||H70390 conserved hypothetical protein aq_1056 - Aquifex aeo... 146 3e-34
pir||B72372 conserved hypothetical protein - Thermotoga maritima... 123 4e-27
pir||D70933 hypothetical protein Rv0573c - Mycobacterium tubercu... 118 1e-25
pir||T36953 conserved hypothetical protein SCJ1.20 - Streptomyce... 112 8e-24
dbj|BAB06968.1| (AP001518) unknown conserved protein in others [... 110 3e-23
pir||T36140 hypothetical protein SCE19A.17 - Streptomyces coelic... 103 3e-21
sp|Q10641|YD30_MYCTU HYPOTHETICAL 54.3 KDA PROTEIN RV1330C >gi|7... 99 6e-20
pir||F81440 hypothetical protein Cj0230c [imported] - Campylobac... 97 3e-19
pir||D70008 nicotinate phosphoribosyltransferase homolog yueK - ... 95 2e-18
pir||G75580 conserved hypothetical protein - Deinococcus radiodu... 92 1e-17
pir||E71302 conserved hypothetical protein TP0628 - syphilis spi... 83 7e-15
emb|CAB16797.1| (Z99707) hypothetical protein [Arabidopsis thali... 79 1e-13
pir||B70179 conserved hypothetical protein BB0635 - Lyme disease... 78 2e-13
pir||H82911 conserved hypothetical UU276 [imported] - Ureaplasma... 71 2e-11
>pir||H75023 nicotinate phosphoribosyltransferase related ed protein PAB1131 -
Pyrococcus abyssi (strain Orsay)
>gi|5459144|emb|CAB50630.1| (AJ248288) Nicotinate
phosphoribosyltransferase related ed protein [Pyrococcus
abyssi]
Length = 390
Score = 785 bits (2004), Expect = 0.0
Identities = 390/390 (100%), Positives = 390/390 (100%)
Query: 1 MGKFYIASEEDIKAGKTTDVYFIRTKKILEAKGIKKKVLADVTTTSLPNNWKWGVLVGVE 60
MGKFYIASEEDIKAGKTTDVYFIRTKKILEAKGIKKKVLADVTTTSLPNNWKWGVLVGVE
Sbjct: 1 MGKFYIASEEDIKAGKTTDVYFIRTKKILEAKGIKKKVLADVTTTSLPNNWKWGVLVGVE 60
Query: 61 EVAKLLEGLPINVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAAL 120
EVAKLLEGLPINVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAAL
Sbjct: 61 EVAKLLEGLPINVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAAL 120
Query: 121 RIKIAAKFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHAL 180
RIKIAAKFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHAL
Sbjct: 121 RIKIAAKFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHAL 180
Query: 181 IITVGDQVKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGKKLFAVRLDTPSSR 240
IITVGDQVKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGKKLFAVRLDTPSSR
Sbjct: 181 IITVGDQVKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGKKLFAVRLDTPSSR 240
Query: 241 RGNFRKIIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVDVADAFGVGGAIASAKPVDF 300
RGNFRKIIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVDVADAFGVGGAIASAKPVDF
Sbjct: 241 RGNFRKIIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVDVADAFGVGGAIASAKPVDF 300
Query: 301 ALDIVEVEGKPIAKRGKLSGRKQVYRCENGHYHVVPAGKKLERCPICNAKVEPLLRPIIE 360
ALDIVEVEGKPIAKRGKLSGRKQVYRCENGHYHVVPAGKKLERCPICNAKVEPLLRPIIE
Sbjct: 301 ALDIVEVEGKPIAKRGKLSGRKQVYRCENGHYHVVPAGKKLERCPICNAKVEPLLRPIIE 360
Query: 361 NGEIVAEFPKAREIREYVLEQARRFNLTIE 390
NGEIVAEFPKAREIREYVLEQARRFNLTIE
Sbjct: 361 NGEIVAEFPKAREIREYVLEQARRFNLTIE 390
>pir||G71199 hypothetical protein PH1868 - Pyrococcus horikoshii
>gi|3258307|dbj|BAA30990.1| (AP000007) 392aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 392
Score = 733 bits (1871), Expect = 0.0
Identities = 354/389 (91%), Positives = 376/389 (96%)
Query: 1 MGKFYIASEEDIKAGKTTDVYFIRTKKILEAKGIKKKVLADVTTTSLPNNWKWGVLVGVE 60
M +FYIASEE+IK GKTTD+YF+RT+KILE K I+KKVLADVTTTSLP NWKWGVLVGVE
Sbjct: 4 MKRFYIASEEEIKTGKTTDIYFLRTRKILETKNIRKKVLADVTTTSLPENWKWGVLVGVE 63
Query: 61 EVAKLLEGLPINVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAAL 120
EVAKLLEG+P+NVYAMPEGTIFHPYEPVLQIEGDY++FGIYETALLGMLSQASG+ATAAL
Sbjct: 64 EVAKLLEGIPVNVYAMPEGTIFHPYEPVLQIEGDYADFGIYETALLGMLSQASGIATAAL 123
Query: 121 RIKIAAKFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHAL 180
RIKIAAKFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHAL
Sbjct: 124 RIKIAAKFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHAL 183
Query: 181 IITVGDQVKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGKKLFAVRLDTPSSR 240
IITVGDQVKAWKYFDEVIE+EVPRIALVDTFYDEK+EAVMAAE LGKKL AVRLDTPSSR
Sbjct: 184 IITVGDQVKAWKYFDEVIEKEVPRIALVDTFYDEKIEAVMAAEALGKKLSAVRLDTPSSR 243
Query: 241 RGNFRKIIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVDVADAFGVGGAIASAKPVDF 300
RGNFR+IIEEV+WEL +RGYDWVKI ISGGLDEEKIKEIVDVADAFGVG AIASAKP+DF
Sbjct: 244 RGNFRRIIEEVKWELKIRGYDWVKILISGGLDEEKIKEIVDVADAFGVGSAIASAKPIDF 303
Query: 301 ALDIVEVEGKPIAKRGKLSGRKQVYRCENGHYHVVPAGKKLERCPICNAKVEPLLRPIIE 360
ALDIVEVEGKPIAKRGKLSGRKQVYRCENGHYHVVPA KKLERCP+CNAKVEPLL+PIIE
Sbjct: 304 ALDIVEVEGKPIAKRGKLSGRKQVYRCENGHYHVVPADKKLERCPVCNAKVEPLLKPIIE 363
Query: 361 NGEIVAEFPKAREIREYVLEQARRFNLTI 389
NGEIV EFPKAR+IREYVLEQA++FNL I
Sbjct: 364 NGEIVVEFPKARDIREYVLEQAKKFNLEI 392
>gb|AAK40686.1| Nicotinic acid phosphoribosyltransferase, putative [Sulfolobus
solfataricus]
Length = 387
Score = 406 bits (1032), Expect = e-112
Identities = 213/384 (55%), Positives = 267/384 (69%), Gaps = 10/384 (2%)
Query: 3 KFYIASEEDIKAGKTTDVYFIRTKKILEAKGIKK-KVLADVTTTSLPNNWKWGVLVGVEE 61
+FYIA + IK GK TD+YF RT K LE GIK KV +V + LP ++W + G+EE
Sbjct: 2 EFYIADFKQIKEGKVTDIYFERTLKTLEYLGIKDAKVRMEVHSYGLPKGYEWALFTGLEE 61
Query: 62 VAKLLEGLPINVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAALR 121
V LLEG+P+NVYAMPEGT+F EPV+ IEG+Y +FGIYETA LG+L S ++T A R
Sbjct: 62 VLHLLEGVPVNVYAMPEGTLFKEIEPVMIIEGNYLDFGIYETAFLGILRHYSSISTKAAR 121
Query: 122 IKIAAKFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALI 181
+K A K ++ FG+R +HPA+APM DRAA+IGG DGVSG + E +G GTMPHAL+
Sbjct: 122 LKFLAMDKTLFFFGLRSLHPALAPMADRAAYIGGMDGVSGAMSKEYLGVDPSGTMPHALM 181
Query: 182 ITVGDQVKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGKKLFAVRLDTPSSRR 241
+ VGD VKAWK FDE + EVPRI LVDTF DE+ EA+ AA LGKKL+ +RLDTPSSRR
Sbjct: 182 LIVGDNVKAWKAFDEAMGSEVPRITLVDTFEDERTEALKAATLLGKKLYGIRLDTPSSRR 241
Query: 242 GNFRKIIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVDVADAFGVGGAIASAKPVDFA 301
GNFRKII+EV+W L + GYD VKIF SGG+DE+ I + D+ D FG+G +IA VDF+
Sbjct: 242 GNFRKIIQEVKWTLKIHGYDHVKIFASGGIDEDDIINLRDIVDGFGIGTSIAFPPSVDFS 301
Query: 302 LDIVE--VEGK--PIAKRGKLSGRKQVYRCENGHYHVVPAGKKLERCPICNAKVEPLLRP 357
DIVE V+GK P KRGK G KQVYRC G + V E P + K PLL+
Sbjct: 302 ADIVEKFVDGKWVPFTKRGKWPGAKQVYRC--GKLNDVITLMDQEH-PSSDCK--PLLQK 356
Query: 358 IIENGEIVAEFPKAREIREYVLEQ 381
+ENG+I+ P +EIREYV++Q
Sbjct: 357 YMENGKIIKPLPSPKEIREYVIKQ 380
>gi|11498427 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7451460|pir||E69352 conserved hypothetical protein
AF0821 - Archaeoglobus fulgidus
>gi|2649780|gb|AAB90414.1| (AE001047) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 381
Score = 399 bits (1014), Expect = e-110
Identities = 211/374 (56%), Positives = 268/374 (71%), Gaps = 14/374 (3%)
Query: 3 KFYIASEEDIKAGKTTDVYFIRTKKILEAKGIKKKVLADVTTTSLPNNWKWGVLVGVEEV 62
+F + SE+DIK G TD YFI T+K+L+AK + V+A+VTT+ WGV G+E+
Sbjct: 2 RFKMVSEDDIKNGIVTDKYFIWTEKVLKAKNVNPTVVAEVTTSG------WGVFAGLEDA 55
Query: 63 AKLLEGLPINVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAALRI 122
LLEGLPI+VYAMPEG++F P+EPV+ I G Y +F YET+LLG L AS VAT A R
Sbjct: 56 LNLLEGLPIDVYAMPEGSLFFPHEPVMTIVGKYQDFARYETSLLGFLCHASAVATQAFRF 115
Query: 123 KIAAKFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALII 182
K+AA K VYSFG R MHPAIAP I+RAA+IGG DGVS + +G K++GTMPHA+II
Sbjct: 116 KLAAGDKRVYSFGTRRMHPAIAPAIERAAYIGGVDGVSNYSAEKYLGLKSMGTMPHAMII 175
Query: 183 TVGDQVKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGKKLFAVRLDTPSSRRG 242
G+QV+AW+ FDEV+++EVPR LVDT++DEK EAVMA E + + + VRLDTPSSRRG
Sbjct: 176 CFGNQVEAWRSFDEVVDKEVPRTMLVDTYFDEKTEAVMAVENV-ENVSGVRLDTPSSRRG 234
Query: 243 NFRKIIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVDVADAFGVGGAIASAKPVDFAL 302
FRKI+EEVRWEL++RG V+IF+SGGL + + E+ D+ DAFGVG AI+ A PVDFAL
Sbjct: 235 KFRKIVEEVRWELDIRGKQHVRIFVSGGLSLKDVLELRDIVDAFGVGTAISGANPVDFAL 294
Query: 303 DIVEVEGKPIAKRGKLSGRKQVYRCENGHYHVVPAGKKLERCPICNAKVEPLLRPIIENG 362
DIVE EG+ AKRGK G KQVYR H+ + KL R + K EPLLR +IE G
Sbjct: 295 DIVEREGRFAAKRGKRGGMKQVYR----HWDELRDEVKLFR-EEYSGKGEPLLRKVIEGG 349
Query: 363 EIV--AEFPKAREI 374
+I+ + KARE+
Sbjct: 350 KIIENTDMEKAREL 363
>pir||A72601 hypothetical protein APE1273 - Aeropyrum pernix (strain K1)
>gi|5104949|dbj|BAA80263.1| (AP000061) 381aa long
hypothetical protein [Aeropyrum pernix]
Length = 381
Score = 367 bits (931), Expect = e-100
Identities = 188/388 (48%), Positives = 257/388 (65%), Gaps = 14/388 (3%)
Query: 6 IASEEDIKAGKTTDVYFIRTKKILEAKGIK-KKVLADVTTTSLPNNWKWGVLVGVEEVAK 64
+AS +I G+ TD+YF+RT+++ E G+ K+V +V SLP ++W V G+EE
Sbjct: 1 MASLGEILEGRATDIYFVRTRRVAEKYGVGGKRVRMEVHAYSLPRGYEWAVYAGLEEALA 60
Query: 65 LLEGLPINVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAALRIKI 124
LL+G P+ VY++PEGT+F +P++ +EG + + ++ETALLG+L ++ +AT A R+++
Sbjct: 61 LLQGKPVTVYSLPEGTVFERKDPLMVVEGRFQDIILFETALLGLLRFSTSIATKAARVRL 120
Query: 125 AA-KFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIIT 183
AA + K V FG+R +HPA+ P DRAA +GG DGVSGVL E +G + GTMPHALII
Sbjct: 121 AAGRGKTVLFFGLRALHPAVQPAADRAALVGGLDGVSGVLSREYLGVEPRGTMPHALIIV 180
Query: 184 VGDQVKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGKKLFAVRLDTPSSRRGN 243
G QV+AW+ F E +EE P IALVDTF+DE+ EA+MAA LG+ L VRLDTPSSRRG
Sbjct: 181 FGSQVEAWRAFAETFKEETPVIALVDTFWDEREEALMAARELGEVLAGVRLDTPSSRRGR 240
Query: 244 FRKIIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVDVADAFGVGGAIASAKPVDFALD 303
R I+EEVRW L++ GY VKIF+SGGLDEE++ E+ DVAD FGVG IA+A +D ++D
Sbjct: 241 MRDIVEEVRWALDIHGYKHVKIFVSGGLDEERVAELRDVADGFGVGTTIAAAPNIDISMD 300
Query: 304 IVEV----EGKPIAKRGKLSGRKQVYRCENGHYHVVPAGKKLERCPICNAKVEPLLRPII 359
+VEV E +P KRGKL G + + C G +V G++ E C EPL R +
Sbjct: 301 VVEVHEDGEWRPRTKRGKLPGARSIVLC-RGEKRIVRLGEEPEGC-------EPLTRKYL 352
Query: 360 ENGEIVAEFPKAREIREYVLEQARRFNL 387
E G + P EIR YVL+Q L
Sbjct: 353 EEGRLAQSLPSLDEIRSYVLKQLENLGL 380
>emb|CAC12271.1| (AL445066) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 392
Score = 353 bits (896), Expect = 2e-96
Identities = 189/393 (48%), Positives = 263/393 (66%), Gaps = 13/393 (3%)
Query: 1 MGKFYIASEEDIKAGKTTDVYFIRTKKILEAKGIKKKVLADVTTTSLPNNWKWGVLVGVE 60
M F AS+EDIK G +DVYF RT + K +V + T + + W G++
Sbjct: 1 MNVFNTASDEDIKKGLASDVYFERTISAIGDKCNDLRVAMEATVSGPLDTWI--NFTGLD 58
Query: 61 EVAKLLEGLPINVYAMPEGTIFHPYE------PVLQIEGDYSEFGIYETALLGMLSQASG 114
EV KLLEGL +++YA+PEGTI P + P +++EG Y +FG+YETA+LG + QASG
Sbjct: 59 EVLKLLEGLDVDLYAIPEGTILFPRDANGLPVPFIRVEGRYCDFGMYETAILGFICQASG 118
Query: 115 VATAALRIKIAAKFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVG 174
++T A ++++AA P +SFGIR MHPAI+PMIDR+A+IGG DGVSG+LGA+++ + VG
Sbjct: 119 ISTKASKVRLAAGDSPFFSFGIRRMHPAISPMIDRSAYIGGADGVSGILGAKLIDQDPVG 178
Query: 175 TMPHALIITVGDQVKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGKKLFAVRL 234
TMPHAL I +GD+ +AWK E + + L+DT+ DEK A+ AE K + +RL
Sbjct: 179 TMPHALSIMLGDE-EAWKLTLENTKNGQKSVLLIDTYMDEKFAAIKIAEMFDKVDY-IRL 236
Query: 235 DTPSSRRGNFRKIIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVDV-ADAFGVGGAIA 293
DTPSSRRGNF +I EVRWEL +RG +KI +SGGLDE +K++ + A+AFGVG +I+
Sbjct: 237 DTPSSRRGNFEALIREVRWELALRGRSDIKIMVSGGLDENTVKKLREAGAEAFGVGTSIS 296
Query: 294 SAKPVDFALDIVEVEGKPIAKRGKLSGRKQVYRCENGH-YHVVPAGKKLERCPICNAKVE 352
SAKP DFA+DIVEV GKP KRGK+SGRK V RC + H VVPA + + C IC ++
Sbjct: 297 SAKPFDFAMDIVEVNGKPETKRGKMSGRKNVLRCTSCHRIEVVPANVQEKTC-ICGGSMQ 355
Query: 353 PLLRPIIENGEIVAEFPKAREIREYVLEQARRF 385
LL + +G+ +E+P+ +EIR +++ F
Sbjct: 356 NLLVKYLSHGKRTSEYPRPKEIRSRSMKELEYF 388
>gb|AAG20598.1| (AE005130) Vng2541c [Halobacterium sp. NRC-1]
Length = 296
Score = 259 bits (655), Expect = 4e-68
Identities = 139/282 (49%), Positives = 182/282 (64%), Gaps = 8/282 (2%)
Query: 89 LQIEGDYSEFGIYETALLGMLSQASGVATAALRIKIAAKFKPVYSFGIRHMHPAIAPMID 148
++I G Y F YETALLG LS ASG+ATAAL + AA + SFG RH+HP+IA +++
Sbjct: 1 MRITGPYQSFARYETALLGFLSHASGMATAALAARRAAPDSHLLSFGARHVHPSIAAVVE 60
Query: 149 RAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIITVG--DQVKAWKYFDEVIEEEVPRIA 206
RAA IGG DG S V +++ + GTMPHAL+I G +Q AW+ F + + ++VPRIA
Sbjct: 61 RAALIGGFDGFSHVAAGDVLDREPGGTMPHALVICFGRGNQEAAWRAFTDGVGDDVPRIA 120
Query: 207 LVDTFYDEKVEAVMAAETLGKKLFAVRLDTPSSRRGNFRKIIEEVRWELNVRGYDWVKIF 266
L DT+ DEK E + A + LG L AVRLDT SSRRG+FR I EV+W L+ G V +F
Sbjct: 121 LCDTYSDEKDEVLRAVDELGDDLDAVRLDTTSSRRGDFRHIAREVQWALDAGGNSDVSVF 180
Query: 267 ISGGLDEEKIKEIVDVADAFGVGGAIASAKPVDFALDIVEVEGKPIAKRGKLSGRKQVYR 326
+SGGL ++ + DV D FGVGG +++A PVDF LDIVEV G+P AKRGKLSG K VYR
Sbjct: 181 VSGGLTPTDLRGLRDVVDGFGVGGFVSNATPVDFGLDIVEVAGEPAAKRGKLSGTKAVYR 240
Query: 327 CENGHYHVVPAGKKLERCPICNAKVEPLLRPIIENGEIVAEF 368
+G +HV A + A LL P++ +G + F
Sbjct: 241 TPDGGHHVALASQP------APADATALLEPLLVDGTVSMAF 276
>pir||H70390 conserved hypothetical protein aq_1056 - Aquifex aeolicus
>gi|2983542|gb|AAC07117.1| (AE000720) hypothetical
protein [Aquifex aeolicus]
Length = 426
Score = 146 bits (366), Expect = 3e-34
Identities = 109/326 (33%), Positives = 169/326 (51%), Gaps = 25/326 (7%)
Query: 72 NVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAALRIKIAAKFKPV 131
NVYA+PEG I EP++Q+E E + ET ++ + + +A+ A+R + AK K +
Sbjct: 91 NVYAIPEGRIVFQNEPLVQVEAPIPEAQLLETLVINTIQFETMIASKAVRSYLVAKGKKL 150
Query: 132 YSFGIRHMHPAIAPMI-DRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIITVGDQVKA 190
FG R H A ++ RA++I G DG S V G VGTM H+ ++ + A
Sbjct: 151 VDFGFRRAHGLEAGILAARASYIAGFDGTSNVEAGREFGIPVVGTMAHSYVMIFDKEEDA 210
Query: 191 WKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGKK---LFAVRLDTPSSRRGNFRKI 247
++ F ++ + I L+DT+ + +EA L K+ + VR+D+ G+ K+
Sbjct: 211 FRAFAKLYPKNA--IFLIDTY--DTIEAAKKVVDLAKEGVPVVGVRIDS-----GDIVKL 261
Query: 248 IEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVD---VADAFGVGGAI---ASAKPVDFA 301
+EVR L+ G V+I +SGG+DE KIKE D DAFGVG A A D A
Sbjct: 262 SKEVRKILDENGLKNVRIIVSGGVDEYKIKEWFDRGAPIDAFGVGTKFITSADAPYFDIA 321
Query: 302 LDIVEVEGKPIAKRGKLSGRKQVYRCENGHYHVVPAGK-KLERCPICNAK--VEPLLRPI 358
+VE EGKP + KLS K+ + + Y GK K + +K EPL+ +
Sbjct: 322 YKLVEYEGKP---KYKLSPGKKTFPYKRQVYRYYENGKMKYDETAKWESKREGEPLVELV 378
Query: 359 IENGEIVAEFPKAREIREYVLEQARR 384
++NG+++ E P +EIRE V+ + +
Sbjct: 379 MKNGKLIKELPSLKEIREVVMSELEK 404
>pir||B72372 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4980984|gb|AAD35559.1|AE001725_4 (AE001725)
conserved hypothetical protein [Thermotoga maritima]
Length = 431
Score = 123 bits (305), Expect = 4e-27
Identities = 102/298 (34%), Positives = 143/298 (47%), Gaps = 47/298 (15%)
Query: 71 INVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAALRIKIAAKFKP 130
I V+A+ +G EP++ IEGD + FG ET LLG++++A+ ATA ++ AA+ KP
Sbjct: 128 IEVHALYDGEEAKEGEPIMTIEGDPTYFGYLETVLLGVIARATSTATAVKKVVKAARGKP 187
Query: 131 VYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIITV-GDQVK 189
V F R H + AA G GVS A+ G K++GTMPHALI G
Sbjct: 188 VLFFSARFDHYWVQATDGYAALKAGAFGVSTDANADYWGVKSMGTMPHALIACYDGKTED 247
Query: 190 AWKYFDEVIEEEVPRIALVD--------------TFYDE------KVEAVMAAETLG--- 226
A FD +EE+V RI LVD FY+ K+ + +G
Sbjct: 248 AAIAFDRHMEEDVNRIVLVDWDNDVIGTTFRVIEKFYEYVMKKPFKLGVTDPSPIIGPGK 307
Query: 227 KKLFAVRLDTPSSRR------------GNFRKIIEEVRWELNVRGYDWVKIFISGGLDEE 274
K++ VR DT + R G +++ R E + G +KI +SGG DE+
Sbjct: 308 NKIWGVRFDTSGNLRDKSVVPKDESSFGVCPELVWRARQEFDKVGLRDLKIVVSGGFDEK 367
Query: 275 KI---KEIVDVADAFGVGGAIASAKPVDFALDIVEVEGKPIAKRGKLSGRKQVYRCEN 329
KI + + ADA+GVG + K VD DIVEV G+ AK G+ Y+ EN
Sbjct: 368 KIDLFERLGVPADAYGVGSRLLREK-VDITADIVEVNGRHCAKVGR-------YKIEN 417
>pir||D70933 hypothetical protein Rv0573c - Mycobacterium tuberculosis (strain
H37RV) >gi|2909632|emb|CAA17444.1| (AL021942)
hypothetical protein Rv0573c [Mycobacterium
tuberculosis]
Length = 463
Score = 118 bits (292), Expect = 1e-25
Identities = 100/327 (30%), Positives = 157/327 (47%), Gaps = 30/327 (9%)
Query: 72 NVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAALRIKIAAKFKPV 131
+V+A PEGT+ P EP +Q+ E + ET +L + S +A+ A R+ AA+ +PV
Sbjct: 95 DVWAAPEGTVIFPNEPAVQLIAPIIEAQLVETFVLNQIHLQSVLASKAARVVAAARGRPV 154
Query: 132 YSFGIRHMHPA-IAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIITVGDQVKA 190
FG R H A + R +++ G G S +L A G GTM H+ + +V A
Sbjct: 155 VDFGARRAHGTDAACKVARTSYLAGAAGTSNLLAARQYGIPTFGTMAHSFVQAFDSEVAA 214
Query: 191 WKYFDEVIEEEVPRIALVDTF--YDEKVEAVMAAETLGKK--LFAVRLDTPSSRRGNFRK 246
++ F + + + DT D +E A+ LG + + AVRLD+ G+ +
Sbjct: 215 FEAFARLYPATMLLVDTYDTLRGVDHVIE---LAKRLGNRFDVRAVRLDS-----GDLDE 266
Query: 247 IIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVDV---ADAFGVGGAIA---SAKPVDF 300
+ + R L+ G + V+IF S GLDE +I ++ D FGVG + A +D
Sbjct: 267 LSKATRARLDTAGLEQVEIFASSGLDENRIAALLAARCPIDGFGVGTQLVVAQDAPALDM 326
Query: 301 ALDIVEVEGKPIAK--RGKL--SGRKQVYR-CENGHYHVVPAGKKLERCPICNAKVEPLL 355
A +V +G K GK+ GRKQV+R E+G + G+ E P +PLL
Sbjct: 327 AYKLVAYDGSGRTKFSSGKVIYPGRKQVFRKLEHGVFCGDTLGEHGENLP-----GDPLL 381
Query: 356 RPIIENGEIVAEF-PKAREIREYVLEQ 381
PI+ NG + + P R++ +Q
Sbjct: 382 VPIMTNGRRIRQHAPTLDGARDWARQQ 408
>pir||T36953 conserved hypothetical protein SCJ1.20 - Streptomyces coelicolor
>gi|5748633|emb|CAB53138.1| (AL109962) conserved
hypothetical protein SCJ1.20 [Streptomyces coelicolor
A3(2)]
Length = 438
Score = 112 bits (277), Expect = 8e-24
Identities = 99/306 (32%), Positives = 143/306 (46%), Gaps = 31/306 (10%)
Query: 73 VYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAALRIKIAAKFKPVY 132
V A+PEG + EP+L++ +E + ET LL +S + VA+ A+R +AA +PV
Sbjct: 91 VRAVPEGRVVFAGEPLLEVTAPLAEAQLVETFLLNQVSHQTAVASKAVRSVLAAAGRPVV 150
Query: 133 SFGIRHMHPAIAPM-IDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIITVGDQVKAW 191
F +R H A M R A + G G S V A G A GTM H+ + D+ A+
Sbjct: 151 DFSLRRTHGTSAGMQAARTAALTGFAGTSNVAAAVRWGLPASGTMAHSYVEAFPDEEAAF 210
Query: 192 KYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGKKL-----FAVRLDTPSSRRGNFRK 246
+ F P LVDT+ + V V A + + L AVRLD+ G+
Sbjct: 211 RAFARA--HPGPVTFLVDTY--DSVRGVRTAARVLRDLGRGPGCAVRLDS-----GDLGD 261
Query: 247 IIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVDVA---DAFGVG---GAIASAKPVDF 300
+ R EL+ G V++ SGGLDE + +V D + VG G A A +D
Sbjct: 262 LARRARAELDRSGLPGVRVVASGGLDEYGVDTLVRSGAPIDVYAVGTRVGTSADAPYLDS 321
Query: 301 ALDIVEVEGKPIAKRGKLS----GRKQVYRCENGHYHVVPAGKKLERCPICNAKVEPLLR 356
A +VE +G+P+ K GRKQV+R G + + E P A EPLLR
Sbjct: 322 AYKLVEYDGRPVMKLSSAKVTSPGRKQVFRRPGGDDVI---ALRDEPGP---AGAEPLLR 375
Query: 357 PIIENG 362
++ +G
Sbjct: 376 TVMRDG 381
>dbj|BAB06968.1| (AP001518) unknown conserved protein in others [Bacillus
halodurans]
Length = 365
Score = 110 bits (272), Expect = 3e-23
Identities = 100/341 (29%), Positives = 161/341 (46%), Gaps = 42/341 (12%)
Query: 9 EEDIKAGKTTDVYFIRTKKILEAKGIKKKVLADVTTTSLPNNWKWGVLVGVEEVAKLLEG 68
+E ++ G + VYF++T+ I+E K ++ T T + +L G +EV L++
Sbjct: 23 DERVRDGWFSAVYFLKTRNIVE------KYRSNNTVTMQFFQKEHAILCGTDEVIALIKT 76
Query: 69 LPIN-----VYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAALRI- 122
N + ++ +G P+E VL + G Y FG E + G+ ++ + VAT +
Sbjct: 77 FAKNPDELEIRSLKDGDKITPFETVLTVTGPYQNFGYLEGIIDGIFARRTSVATNVYNVV 136
Query: 123 ---KIAAKFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHA 179
+++ K KPV G R H AA+IGG + E G+K +GTMPHA
Sbjct: 137 KAARLSGKQKPVIFMGDRDDHFTQQSGDGYAAYIGGSTAQATHAMNEWWGKKGMGTMPHA 196
Query: 180 LI-ITVGDQVKAWK-YFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGKKLFAVRLDTP 237
LI + GD V A + Y++ +E+ ALVD D +++ A G+KL VR+DT
Sbjct: 197 LIQLFEGDVVAATQAYYETYPTDEL--TALVDYNNDVITDSLKVARAFGEKLKGVRVDTS 254
Query: 238 SSR-----------------RGNFRKIIEEVRWELNVRGYDWVKIFISGGLDEEKI---- 276
+ RG ++ +R L+ G+ VKI +GG + E+I
Sbjct: 255 RTMVDQYFCRNPQVMGSFDPRGVNPPLLFALREALDKEGFQHVKIIATGGFNAERIAAYE 314
Query: 277 KEIVDVADAFGVGGAIASAKPVDFALDIVEVEGKPIAKRGK 317
K+ V V D +GVG ++ + F D V + GK AK G+
Sbjct: 315 KQQVPV-DIYGVGSSLLKIH-IGFTGDNVILNGKEQAKAGR 353
>pir||T36140 hypothetical protein SCE19A.17 - Streptomyces coelicolor
>gi|5531366|emb|CAB50998.1| (AL096852) hypothetical
protein [Streptomyces coelicolor A3(2)]
Length = 448
Score = 103 bits (255), Expect = 3e-21
Identities = 102/402 (25%), Positives = 171/402 (42%), Gaps = 62/402 (15%)
Query: 18 TDVYFIRT-KKILEAKGIKKKVLADVTTTSLPNNWKWGVLVGVEEVAKLLEGLPIN---- 72
TD Y + + L+A ++ + +V T LP+ ++GV+ G V +E +
Sbjct: 19 TDQYELTMLRAALKAGTAGRRSVFEVFTRRLPDGRRYGVVAGTGRVLDAVENFRFDADVL 78
Query: 73 -------------------------VYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLG 107
++ PEG ++ P P++++EG + E + ET +L
Sbjct: 79 RFLREQDIVDEETLDWLAQYRFSGDIWGYPEGEVYFPGSPIMRVEGTFGECVLLETVILS 138
Query: 108 MLSQASGVATAALRIKIAAKFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEM 167
+L+ S +A AA R+ AA +P+ G R H A R+A++GG S +
Sbjct: 139 ILNHDSAIAAAASRMSSAAGPRPLIEMGARRTHELAAVAAARSAYVGGFATTSDLAAGFR 198
Query: 168 MGEKAVGTMPHALIITVGDQVKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGK 227
VGT HA + ++ A++ + + + LVDT YD A E G
Sbjct: 199 YNIPTVGTSAHAFTLLHDNERDAFRAQVDALGRDT--TLLVDT-YDVAEAVRTAVEVAGP 255
Query: 228 KLFAVRLDTPSSRRGNFRKIIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVDV-ADAF 286
+L AVR+D+ G+ + VR +L+ G KI ++ LDE I + DA+
Sbjct: 256 ELGAVRIDS-----GDLLLVAHRVRQQLDELGATETKIVVTSDLDEYAIASLAAAPVDAY 310
Query: 287 GVGGAIASAKPVDFALDIVEVEGK-----------PIAKR---GKLS--GRKQVYR--CE 328
GVG + + A + ++ + P+AK+ GK S GRK R
Sbjct: 311 GVGTQLVTGSGHPTASMVYKLVARAESGAEGAPLVPVAKKSSGGKTSVGGRKWAARRLDA 370
Query: 329 NGHYHVVPAGKKLERCPICNAKVE-PLLRPIIENGEIVAEFP 369
+GH G P+ +A + LL +++ GE+VA P
Sbjct: 371 DGHAEAEVVGTG----PVPDALADRQLLVELVKGGEVVAREP 408
>sp|Q10641|YD30_MYCTU HYPOTHETICAL 54.3 KDA PROTEIN RV1330C >gi|7476727|pir||F70770
hypothetical protein Rv1330c - Mycobacterium
tuberculosis (strain H37RV) >gi|1340096|emb|CAA98094.1|
(Z73902) hypothetical protein Rv1330c [Mycobacterium
tuberculosis]
Length = 509
Score = 99.5 bits (244), Expect = 6e-20
Identities = 104/405 (25%), Positives = 161/405 (39%), Gaps = 65/405 (16%)
Query: 14 AGKTTDVYFIRT-KKILEAKGIKKKVLADVTTTSLPNNWKWGVLVGVEEVAKLLEGLP-- 70
AG TD Y + L + +V LP ++GV+ G +LLE LP
Sbjct: 81 AGLLTDKYELTMLAAALRDGSANRPTTFEVFARRLPTGRRYGVVAGT---GRLLEALPQF 137
Query: 71 ------------------------------INVYAMPEGTIFHPYEPVLQIEGDYSEFGI 100
I+ YA EG ++ P PVL + G ++E +
Sbjct: 138 RFDADACELLAQFLDPATVRYLREFRFRGDIDGYA--EGELYFPGSPVLSVRGSFAECVL 195
Query: 101 YETALLGMLSQASGVATAALRIKIAAKFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVS 160
ET +L + + + +A+AA R+ AA +P+ G R H A RAA+I G S
Sbjct: 196 LETLVLSIFNHDTAIASAAARMVSAAGGRPLIEMGSRRTHERAAVAAARAAYIAGFAASS 255
Query: 161 GVLGAEMMGEKAVGTMPHALIITVGD-----QVKAWKYFDEVIEEEVPRIALVDTFYDEK 215
+ G A GT HA + ++ F +E P L+ YD
Sbjct: 256 NLAAQRRYGVPAHGTAAHAFTMLHAQHGGPTELAERAAFRAQVEALGPGTTLLVDTYDVT 315
Query: 216 VEAVMAAETLGKKLFAVRLDTPSSRRGNFRKIIEEVRWELNVRGYDWVKIFISGGLDEEK 275
A G +L A+R+D+ G + + R +L+ G +I +SG LDE
Sbjct: 316 TGVANAVAAAGAELGAIRIDS-----GELGVLARQAREQLDRLGATRTRIVVSGDLDEFS 370
Query: 276 IKEI-VDVADAFGVGGAI---ASAKPVDFALDIVEVEGKPIAKRGKL----SGRKQVYRC 327
I + + D++GVG ++ + A + +VEV+G P+ KR GRK+ R
Sbjct: 371 IAALRGEPVDSYGVGTSLVTGSGAPTANMVYKLVEVDGVPVQKRSSYKESPGGRKEALRR 430
Query: 328 ENG-----HYHVVPAGKKLERCPICNAKVEPLLRPIIENGEIVAE 367
V PAG R P+ L P++ G+ VA+
Sbjct: 431 SRATGTITEELVHPAG----RPPVIVEPHRVLTLPLVRAGQPVAD 471
>pir||F81440 hypothetical protein Cj0230c [imported] - Campylobacter jejuni
(strain NCTC 11168) >gi|6967708|emb|CAB72699.1|
(AL139074) hypothetical protein Cj0230c [Campylobacter
jejuni]
Length = 457
Score = 97.1 bits (238), Expect = 3e-19
Identities = 92/342 (26%), Positives = 152/342 (43%), Gaps = 54/342 (15%)
Query: 41 DVTTTSLPNNWKWGVLVGVEEVAKLLEGLPIN---------------------------- 72
D+ +P++ + + G+E++ +E L +
Sbjct: 36 DIFFRKIPDSGSFAIFAGLEDILDFVENLSFDAEDIEFLRKQGIFDTEFLDFLANFKFKG 95
Query: 73 -VYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAALRIKIAAKFKPV 131
+YAM EG + P EP+L I+ E + ET LL L+ S +AT RI AAK +
Sbjct: 96 EIYAMREGEVIFPNEPLLCIKATTIEAQLLETFLLLSLNHQSLIATKTNRIVRAAKDSKI 155
Query: 132 YSFGIRHMHPAIAPMID-RAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIITVGDQVKA 190
FG R + A + RAAFIGGC G + L ++ GTM H+ + ++++A
Sbjct: 156 LEFGSRRAQGSEAALKGARAAFIGGCIGSACTLAGKIYNIPINGTMAHSWVQMFENELEA 215
Query: 191 WKYFDEVIEEEVPRIALVDTF---YDEKVEAVMAAETLGKKLFAVRLDTPSSRRGNFRKI 247
+K + ++ + + L+DT+ A+ + G + VR+D+ GN ++
Sbjct: 216 FKAYVKIYPKN--PVFLIDTYDCLNSGLKNAIKVFKEFGIQEGGVRIDS-----GNLLEL 268
Query: 248 IEEVRWELNVRGYDWVKIFISGGLDE---EKIKEIVDVADAFGVGGAI--ASAKPV-DFA 301
++R EL+ G KI +S LDE +K+KE D FGVG + AS+ P+
Sbjct: 269 SLKIRQELDQAGLQKCKIIVSNALDEWSIKKLKEQNAPIDIFGVGERLITASSDPIFSCV 328
Query: 302 LDIVEVEGKPIAKRGKLSGRKQVYRCENGHYHVVPAGKKLER 343
+ +E + I + K+S EN +P KKL R
Sbjct: 329 YKLAALEDQGIKPKIKIS--------ENNEKSTLPHFKKLFR 362
>pir||D70008 nicotinate phosphoribosyltransferase homolog yueK - Bacillus
subtilis >gi|2635670|emb|CAB15163.1| (Z99120) similar to
nicotinate phosphoribosyltransferase [Bacillus subtilis]
Length = 490
Score = 94.8 bits (232), Expect = 2e-18
Identities = 93/365 (25%), Positives = 150/365 (40%), Gaps = 54/365 (14%)
Query: 18 TDVYFIRTKKILEAKGI-KKKVLADVTTTSLPNNWKWGVLVGVEEVAKLLEGLPI----- 71
TD+Y I + GI +KK + ++ LP + V G+E+ + LE
Sbjct: 15 TDLYQINMAETYWRDGIHEKKAIFELFFRRLPFENGYAVFAGLEKAIEYLENFKFTDSDL 74
Query: 72 ------------------------NVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLG 107
++Y+M EG + EP++++E E + ETALL
Sbjct: 75 SYLQDELGYHEDFIEYLRGLSFTGSLYSMKEGELVFNNEPIMRVEAPLVEAQLIETALLN 134
Query: 108 MLSQASGVATAALRIKIAAKFKPVYSFGIRHMHPAIAPMID-RAAFIGGCDGVSGVLGAE 166
+++ + +AT A RIK + FG R H A M RAA IGG S V +
Sbjct: 135 IVNYQTLIATKAARIKGVIGDEVALEFGTRRAHEMDAAMWGARAALIGGFSATSNVRAGK 194
Query: 167 MMGEKAVGTMPHALIITVGDQVKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLG 226
GT HAL+ D+ A+K + E ++ V + DT A+ A+ G
Sbjct: 195 RFNIPVSGTHAHALVQAYRDEYTAFKKYAETHKDCVFLVDTYDTLRSGMPNAIRVAKEFG 254
Query: 227 KKL--FAVRLDTPSSRRGNFRKIIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVDVA- 283
++ +RLD+ G+ + ++ R L+ G+ K+ S LDE I +
Sbjct: 255 DRINFIGIRLDS-----GDLAYLSKKARKMLDEAGFTDAKVIASSDLDEHTIMNLKAQGA 309
Query: 284 --DAFGVGGAIASAKP-----VDFALDIVEVEGKPI--------AKRGKLSGRKQVYRCE 328
D +GVG + +A + L +E +GK + ++ GRK+VYR
Sbjct: 310 RIDVWGVGTKLITAYDQPALGAVYKLVAIEEDGKMVDTIKISSNPEKVTTPGRKKVYRII 369
Query: 329 NGHYH 333
N H
Sbjct: 370 NQSNH 374
>pir||G75580 conserved hypothetical protein - Deinococcus radiodurans (strain
R1) >gi|6460780|gb|AAF12485.1|AE001863_110 (AE001863)
conserved hypothetical protein [Deinococcus radiodurans]
Length = 474
Score = 92.1 bits (225), Expect = 1e-17
Identities = 85/275 (30%), Positives = 126/275 (44%), Gaps = 26/275 (9%)
Query: 73 VYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAALRIKIAAKF--KP 130
V A PEG++ P+EP+L + G E + ETALL L+ + VAT A R +AA+
Sbjct: 94 VTAFPEGSVVFPHEPLLTVRGPLWEAQLVETALLNTLNFQTLVATKAARCVLAAQAGGGT 153
Query: 131 VYSFGIRHMH-PAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIITVGDQVK 189
V FG R P A RAAF+GG G S + G GT HA + + ++
Sbjct: 154 VLEFGARRAQGPNGAVSAARAAFVGGAVGTSNLEAGRQFGIPVSGTHAHAWVESFPTELD 213
Query: 190 AWKYFDEVIEEEVPRIA-LVDTFYDEKVEAVMAAETL---GKKLFAVRLDTPSSRRGNFR 245
A++ + E + + VDT A+ A L G +L VR+D+ G+
Sbjct: 214 AFRAYAEFYPDSTTLLLDTVDTLGSGLPNALTVAAELRAKGHELGGVRVDS-----GDLA 268
Query: 246 KIIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIV---DVADAFGVGGAIASA-KPVDFA 301
+ +R L+ G+ VKI +S L E I ++ D +GVG +A+A P A
Sbjct: 269 YLSRVIRERLDAAGFPDVKIVVSNDLSESVISGVIAEGGRVDVYGVGTQLATAGGPGGGA 328
Query: 302 L----DIVEVEGKPIAK------RGKLSGRKQVYR 326
L + E+ G+P K + L G K V+R
Sbjct: 329 LGGVYKLAELNGRPRMKLTGDPAKSSLPGTKAVWR 363
>pir||E71302 conserved hypothetical protein TP0628 - syphilis spirochete
>gi|3322923|gb|AAC65600.1| (AE001237) conserved
hypothetical protein [Treponema pallidum]
Length = 493
Score = 82.7 bits (201), Expect = 7e-15
Identities = 63/227 (27%), Positives = 116/227 (50%), Gaps = 16/227 (7%)
Query: 72 NVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAALRIKIAAKFKPV 131
+++A+ EG++ P+EP++++ E + E +L ++ S +AT R+ A+ +
Sbjct: 91 DIHALEEGSVIFPHEPIIRVHARLVEALLLEGLILNTINFQSLIATKTARMWRASGEGVL 150
Query: 132 YSFGIRHMHPAIAPM-IDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIITVGDQVKA 190
FG+R + RAA IGG G S L A++ G + +GTM HA +++ + +A
Sbjct: 151 MEFGLRRAQGYDGALSATRAAAIGGATGTSNTLAAKLYGIRPMGTMAHAWVMSFDSEEEA 210
Query: 191 WKYFDEVIEEEVPRIALVDTFY--DEKVEAVMAAETLGK---KLFAVRLDTPSSRRGNFR 245
++ + + + L+DT++ + ++ +A T K K F VRLD+ G+ +
Sbjct: 211 FERYAALYGS--ASVFLIDTYHTLESGIQNAIAIGTRLKAAGKSFGVRLDS-----GDMQ 263
Query: 246 KIIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIV---DVADAFGVG 289
+ +VR L+ G +I +S LDE I+ +V DA+GVG
Sbjct: 264 YLSVQVRAALDAAGLPEARIAVSNELDETIIESLVLSGAPIDAWGVG 310
>emb|CAB16797.1| (Z99707) hypothetical protein [Arabidopsis thaliana]
>gi|7270643|emb|CAB80360.1| (AL161590) hypothetical
protein [Arabidopsis thaliana]
Length = 458
Score = 78.8 bits (191), Expect = 1e-13
Identities = 80/305 (26%), Positives = 129/305 (42%), Gaps = 27/305 (8%)
Query: 37 KVLADVTTTSLPNNWKWGVLVGVEEV-AKLLEGLP---INVYAMPEGTIFHPYEPVLQIE 92
K LA+ T N+ L G EE L GL I VYA+ EG++ P P+L+IE
Sbjct: 77 KFLANFNLTDEEINFVRDSLPGCEEAFCDYLRGLDCSDIEVYAISEGSVVFPKVPLLRIE 136
Query: 93 GDYSEFGIYETALLGMLSQASGVATAALRIK-IAAKFKPVYSFGIRHMH-PAIAPMIDRA 150
G + + ET L +++ AS VAT A R + +A K K + FG R P A +
Sbjct: 137 GPVAVVQLLETPFLNLINYASLVATNAARHRFVAGKSKLLLEFGARRAQGPDGAISASKY 196
Query: 151 AFIGGCDGVSGVLGAEMMGEKAVGTMPHAL-------------IITVGDQVKAWKYFDEV 197
++GG D S V ++ G GT HA ++ D K F +
Sbjct: 197 CYLGGFDATSNVAAGKLFGIPLRGTHSHAFVSSFMSLDEIVDKVLRSSDGKSTCKDFICL 256
Query: 198 IEEEVPRIALVDTFYDEKVEAVMAAETLGKKLFAVRLDTP--SSRRGNFRKIIEEVRWEL 255
++ + +I ++ + +A LG K +RLD+ + RK + +L
Sbjct: 257 VQTCLTKIQVMKSGIPNFCAVALALNELGYKAVGIRLDSGDLAYLSTEVRKFFCAIERDL 316
Query: 256 NVRGYDWVKIFISGGLDEEKIKEI---VDVADAFGVGGAIASA---KPVDFALDIVEVEG 309
V + + + S L+EE + + DAFG+G + + + +VE+
Sbjct: 317 KVPDFGKMIVTASNDLNEETVDALNKQGHEVDAFGIGTNLVTCYAQAALGCVFKLVEINN 376
Query: 310 KPIAK 314
+P K
Sbjct: 377 QPRIK 381
>pir||B70179 conserved hypothetical protein BB0635 - Lyme disease spirochete
>gi|2688569|gb|AAB91532.1| (AE001165) conserved
hypothetical protein [Borrelia burgdorferi]
Length = 481
Score = 77.6 bits (188), Expect = 2e-13
Identities = 68/239 (28%), Positives = 113/239 (46%), Gaps = 20/239 (8%)
Query: 69 LPINVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAALRIKIAAKF 128
L + + ++ EG I P PV+ IEG E + E +L +++ S +AT RIK +
Sbjct: 88 LNVKISSIEEGRIVFPQAPVVVIEGHLIELLLIEGLVLNIINFESLIATKTARIKESGA- 146
Query: 129 KPVYSFGIRHMHPAIAPM-IDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIITVGDQ 187
K + G+R + +AA+IGG D S +L GTM H+ I++ +
Sbjct: 147 KILAELGLRRAQGINGALSASKAAYIGGADFTSNMLAGYKYNIPVTGTMAHSWIMSFETE 206
Query: 188 VKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGKKL-------FAVRLDTPSSR 240
+A++ + + +V L+DT YD + A + K+L F++R+D+
Sbjct: 207 EQAFREYAKTYPNKVS--LLIDT-YDTLNSGLKNAIKIFKELKHEEKNNFSIRIDS---- 259
Query: 241 RGNFRKIIEEVRWELNVRGYDWVKIFISGGLDEEKIKEIVDV---ADAFGVGGAIASAK 296
G+ + + R ELN G + VKI S LDE I + + D +GVG + +AK
Sbjct: 260 -GDLEYLSKAARKELNRNGLNHVKIIASNELDENIIMYLNSINAPIDIWGVGTNLVTAK 317
>pir||H82911 conserved hypothetical UU276 [imported] - Ureaplasma urealyticum
>gi|6899248|gb|AAF30685.1|AE002124_7 (AE002124)
conserved hypothetical [Ureaplasma urealyticum]
Length = 363
Score = 71.4 bits (172), Expect = 2e-11
Identities = 89/344 (25%), Positives = 141/344 (40%), Gaps = 43/344 (12%)
Query: 9 EEDIKAGKTTDVYFIRTKKILEAKGIKKKVLADVTTTSLPNNWKWGVLV-GVEEVAKLLE 67
+ D+ T YFI+T KI+E V+ T S K ++V G EV LLE
Sbjct: 16 DRDLLNSAYTAHYFIKTCKIIELHAPNHSVIMQFTHFS-----KTPIMVCGTSEVLALLE 70
Query: 68 GL-------PINVYAMPEGTIFHPYEPVLQIEGDYSEFGIYETALLGMLSQASGVATAAL 120
+ +Y +P+G + P E + IEG Y FG E + +L++ S +AT
Sbjct: 71 FCLSKKELKQLKIYYVPDGHVIKPKEALFVIEGPYEIFGWLENIIDSILARRSSIATNCY 130
Query: 121 RI-KIAAKFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGE-----KAVG 174
+ + + V R ++ P AA +GG E + + K +G
Sbjct: 131 NVLNLINDEQKVIYMSDRSDDYSLQPYDGYAAAVGGMQYFVTQKQVEFLKDINYECKVIG 190
Query: 175 TMPHALIITVGDQVK-AWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAETLGKKLFAVR 233
+MPHALI ++ A + F + + P IA++D + + + + + +LFAVR
Sbjct: 191 SMPHALIQQNNGRIDLACEMFAQTFPSD-PLIAVID-YNNNVLNDLEQLRYMFDRLFAVR 248
Query: 234 LDT-----PSSRRGNFRKI------------IEEVRWELNVRGYDWVKIFISGGLDEEKI 276
+DT S F + I VR L+ G +KI S G+D I
Sbjct: 249 IDTAKDLIDESLLSTFNNVGNRDLHGCNPYLIALVREYLDNNGGKHIKIIASSGIDLNGI 308
Query: 277 KEI---VDVADAFGVGGAIASAKPVDFALDIVEVEGKPIAKRGK 317
K D +G+ G S V D+V ++ AK G+
Sbjct: 309 KNFNKHNSAIDFYGI-GTYLSHLSVHITADLVCLDNVYGAKVGR 351
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.139 0.407
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142870628
Number of Sequences: 2977
Number of extensions: 6195630
Number of successful extensions: 18707
Number of sequences better than 1.0e-10: 21
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 18652
Number of HSP's gapped (non-prelim): 24
length of query: 390
length of database: 189,106,746
effective HSP length: 55
effective length of query: 335
effective length of database: 156,189,961
effective search space: 52323636935
effective search space used: 52323636935
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 166 (69.1 bits)