BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1139 (PAB1139) DE:NADH-dependent DYHYDROGENASE RELATED
PROTEIN
         (335 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||B75025 NADH-dependent dyhydrogenase related protein PAB1139...   678  0.0
pir||E71201 probable glucose-fructose oxidoreductase - Pyrococcu...   642  0.0
dbj|BAB04967.1| (AP001511) NADH-dependent dyhydrogenase [Bacillu...   141  1e-32
pir||H69216 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase relat...   138  9e-32
gb|AAK43117.1| Dehydrogenase, putative [Sulfolobus solfataricus]      135  8e-31
pir||D71201 hypothetical protein PH1881 - Pyrococcus horikoshii ...   122  5e-27
pir||E75096 NADH-dependent dehydrogenase homolog. PAB0775 - Pyro...   122  8e-27
sp|O05389|YRBE_BACSU HYPOTHETICAL 37.8 KDA PROTEIN IN CSBX-NADA ...   121  1e-26
gb|AAK43149.1| Dehydrogenase, putative [Sulfolobus solfataricus]      120  3e-26
pir||A75025 NADH-dependent dyhydrogenase related protein PAB1138...   116  5e-25
pir||S70672 dehydrogenase homolog - Bordetella pertussis >gi|992...   113  3e-24
pir||B72359 lipopolysaccharide biosynthesis protein BplA - Therm...   111  9e-24
gb|AAC23913.1| (AF039207) NADH-dependent dehydrogenase homolog [...   109  4e-23
pir||D72381 dehydrogenase - Thermotoga maritima (strain MSB8) >g...   105  9e-22
pir||B75475 glucose-fructose oxidoreductase - Deinococcus radiod...   104  2e-21
dbj|BAB07562.1| (AP001520) oxidoreductase [Bacillus halodurans]       102  4e-21
emb|CAB60174.1| (AL132824) putative dehydrogenase [Streptomyces ...   102  6e-21
sp|P40332|YISS_BACSU HYPOTHETICAL 37.5 KD PROTEIN IN DEGA-NPRB I...   102  8e-21
gb|AAD41367.1|AF151698_4 (AF151698) putative oxidoreductase [Agr...    99  7e-20
emb|CAB02496.1| (Z80356) glucose-fructose oxidoreductase [Zymomo...    97  3e-19
pdb|1OFG|A Chain A, Glucose-Fructose Oxidoreductase >gi|2098324|...    97  3e-19
sp|Q07982|GFO_ZYMMO GLUCOSE--FRUCTOSE OXIDOREDUCTASE PRECURSOR (...    97  3e-19
sp|Q44258|CBAC_ALCSB 1-CARBOXY-3-CHLORO-3,4-DIHYDROXYCYCLO HEXA-...    96  4e-19
gb|AAK43115.1| Dehydrogenase, putative [Sulfolobus solfataricus]       96  6e-19
emb|CAB88961.1| (AL353864) putative oxidoreductase. [Streptomyce...    95  1e-18
gb|AAC01706.1| (AF040570) unknown [Amycolatopsis mediterranei]         94  2e-18
gb|AAD45293.1|AF156256_1 (AF156256) putative dehydrogenase [Vibr...    94  2e-18
dbj|BAB05884.1| (AP001514) unknown conserved protein [Bacillus h...    92  6e-18
gb|AAK43113.1| Dehydrogenase, putative [Sulfolobus solfataricus]       92  9e-18
sp|P09400|STRI_STRGR STREPTOMYCIN BIOSYNTHESIS PROTEIN STRI >gi|...    92  9e-18
sp|Q05184|PHT4_PSEPU PUTATIVE 4,5,-DIHYDROXYPHTHALATE DEHYDROGEN...    91  1e-17
dbj|BAB04429.1| (AP001509) unknown conserved protein [Bacillus h...    88  2e-16
pir||A83617 probable oxidoreductase PA0237 [imported] - Pseudomo...    86  6e-16
sp|P49305|YMO1_RHIME HYPOTHETICAL 36.4 KD PROTEIN IN MOCC-MOCA I...    85  1e-15
gb|AAD03557.1| (AF095748) phthalate dihydrodiol dehydrogenase [B...    84  2e-15
dbj|BAB05940.1| (AP001514) unknown conserved protein [Bacillus h...    84  2e-15
gb|AAC31183.1| (AF076240) putative NADH-inositol dehydrogenase M...    83  6e-15
dbj|BAB05939.1| (AP001514) dehydrogenase [Bacillus halodurans]         82  1e-14
emb|CAC11395.1| (AL445063) glucose-fructose oxidoreductase relat...    81  2e-14
sp|O68965|MI2D_RHIME MYO-INOSITOL 2-DEHYDROGENASE >gi|3088561|gb...    80  4e-14
emb|CAB88965.1| (AL353864) putative oxidoreductase. [Streptomyce...    79  6e-14
sp|Q54728|YJHC_STRPN HYPOTHETICAL PROTEIN IN NANB 3'REGION (ORF-...    78  1e-13
gb|AAC31181.1| (AF076240) unknown [Rhizobium leguminosarum bv. v...    77  2e-13
emb|CAC12307.1| (AL445066) glucose-fructose oxidoreductase relat...    76  5e-13
sp|P49307|MOCA_RHIME RHIZOPINE CATABOLISM PROTEIN MOCA >gi|21208...    76  7e-13
emb|CAB96550.1| (AJ007932) D-oliose 4-ketoreductase [Streptomyce...    74  2e-12
gb|AAG09709.1|AF218837_4 (AF218837) unknown [Pasteurella multocida]    73  4e-12
pir||S76068 hypothetical protein - Synechocystis sp. (strain PCC...    73  6e-12
sp|P74041|Y816_SYNY3 HYPOTHETICAL 41.5 KD PROTEIN SLL0816 >gi|74...    71  2e-11
emb|CAC11912.1| (AL445065) hypothetical protein [Thermoplasma ac...    71  2e-11
sp|P55480|Y4HM_RHISN HYPOTHETICAL PROTEIN Y4HM PRECURSOR >gi|746...    70  3e-11
gb|AAD13550.1| (AF080235) oxidoreductase homolog [Streptomyces c...    70  3e-11
sp|P26935|MI2D_BACSU MYO-INOSITOL 2-DEHYDROGENASE >gi|80338|pir|...    70  4e-11
pir||A69834 conserved hypothetical protein yhjJ - Bacillus subti...    69  5e-11
gb|AAD51832.1|AF175299_7 (AF175299) ThuB [Sinorhizobium meliloti]      69  9e-11

>pir||B75025 NADH-dependent dyhydrogenase related protein PAB1139 - Pyrococcus
           abyssi (strain Orsay) >gi|5459154|emb|CAB50640.1|
           (AJ248288) NADH-dependent DYHYDROGENASE RELATED PROTEIN
           [Pyrococcus abyssi]
           Length = 335
           
 Score =  678 bits (1730), Expect = 0.0
 Identities = 335/335 (100%), Positives = 335/335 (100%)

Query: 1   MVRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKL 60
           MVRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKL
Sbjct: 1   MVRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKL 60

Query: 61  LRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM 120
           LRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM
Sbjct: 61  LRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM 120

Query: 121 VPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGG 180
           VPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGG
Sbjct: 121 VPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGG 180

Query: 181 FMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGWAN 240
           FMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGWAN
Sbjct: 181 FMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGWAN 240

Query: 241 PKGYPYGLEIKYYIVGDDGFLDIRSAYPDFTVYQDKTEKIFWERADVEGIVNAFIDAIQQ 300
           PKGYPYGLEIKYYIVGDDGFLDIRSAYPDFTVYQDKTEKIFWERADVEGIVNAFIDAIQQ
Sbjct: 241 PKGYPYGLEIKYYIVGDDGFLDIRSAYPDFTVYQDKTEKIFWERADVEGIVNAFIDAIQQ 300

Query: 301 DKEPPITGEDALKNLAVVLAAYESSKTGKAVKVEL 335
           DKEPPITGEDALKNLAVVLAAYESSKTGKAVKVEL
Sbjct: 301 DKEPPITGEDALKNLAVVLAAYESSKTGKAVKVEL 335


>pir||E71201 probable glucose-fructose oxidoreductase - Pyrococcus horikoshii
           >gi|3258321|dbj|BAA31004.1| (AP000007) 335aa long
           hypothetical glucose-fructose oxidoreductase [Pyrococcus
           horikoshii]
           Length = 335
           
 Score =  642 bits (1639), Expect = 0.0
 Identities = 309/335 (92%), Positives = 329/335 (97%)

Query: 1   MVRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKL 60
           MVRFG+ISYAHPHALRYA+TIRA+RRAKLVAISGDGANS LAK+EAKKYGAKFYQ+YE+L
Sbjct: 1   MVRFGIISYAHPHALRYASTIRASRRAKLVAISGDGANSALAKVEAKKYGAKFYQNYEQL 60

Query: 61  LRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM 120
           L+D+SVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM
Sbjct: 61  LKDKSVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM 120

Query: 121 VPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGG 180
           VPFNPRFTQPLQKAKEMIE GEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDI+KSGGGG
Sbjct: 121 VPFNPRFTQPLQKAKEMIESGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIRKSGGGG 180

Query: 181 FMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGWAN 240
           FMDTAPHGIDSLFWLTESEP++VYADIG KIWGF+VDDIGTALIEFKN VIA+LTAGWAN
Sbjct: 181 FMDTAPHGIDSLFWLTESEPVKVYADIGSKIWGFEVDDIGTALIEFKNNVIALLTAGWAN 240

Query: 241 PKGYPYGLEIKYYIVGDDGFLDIRSAYPDFTVYQDKTEKIFWERADVEGIVNAFIDAIQQ 300
           PKGYPYGLE+KYYIVGDDGFLDIR+AYPDFTVYQ+KTEKIFWERADVEGI+NAFIDAIQQ
Sbjct: 241 PKGYPYGLEMKYYIVGDDGFLDIRTAYPDFTVYQEKTEKIFWERADVEGIINAFIDAIQQ 300

Query: 301 DKEPPITGEDALKNLAVVLAAYESSKTGKAVKVEL 335
           D+EPPITGEDALKNLA+VLAAYESSKTGK VK+ L
Sbjct: 301 DREPPITGEDALKNLALVLAAYESSKTGKVVKINL 335


>dbj|BAB04967.1| (AP001511) NADH-dependent dyhydrogenase [Bacillus halodurans]
           Length = 340
           
 Score =  141 bits (352), Expect = 1e-32
 Identities = 86/303 (28%), Positives = 155/303 (50%), Gaps = 15/303 (4%)

Query: 42  AKIEAKKYGAKFYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALT 101
           AK  AK YGA  Y D+ +LL  E ++ V +      H  ++I A + G  +L EKP+A +
Sbjct: 42  AKKVAKLYGAIAYTDHMQLLEKEEIDLVSVCTPNAYHAPISIDALKAGTHVLCEKPMATS 101

Query: 102 LEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMF 161
            E+ + ++KAA +AG+ LM+  N RF    +KA+++I  G+IGK+    T   +  P  +
Sbjct: 102 AEECEAMIKAAEEAGMCLMIGHNQRFVSSHEKARQLIATGDIGKIYSFRTTFGHGGPEGW 161

Query: 162 LEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGT 221
               + SWFF   ++  G   D   H  D L +L   E + V A +        VDD   
Sbjct: 162 SVDGENSWFFKKDQAFIGAMGDLGVHKADLLRYLLGEEVVEVGAFVTTSAKQGDVDDNAV 221

Query: 222 ALIEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGDDGFLDIR-SAYPDFTVYQDKTEKI 280
           A+++ ++G++  LTA W+    Y    +    + G++  L +    +    V+    E +
Sbjct: 222 AILKTESGIVGTLTASWS----YVAKEDNSTILYGENAILRLEDDPHYSLIVHYKNGETV 277

Query: 281 FWERADVEG----------IVNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGKA 330
            +E   ++           ++  F++++ + KEPPI+G++   +L ++LAA E+S+TG+ 
Sbjct: 278 KYELGQIQSNDEGGQTDSRVIAHFVNSVLEGKEPPISGKEGYASLNIILAAMEASRTGRT 337

Query: 331 VKV 333
           +K+
Sbjct: 338 IKL 340


>pir||H69216 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase related protein -
           Methanobacterium thermoautotrophicum (strain Delta H)
           >gi|2621968|gb|AAB85373.1| (AE000863)
           3-chlorobenzoate-3,4-dioxygenase dyhydrogenase related
           protein [Methanobacterium thermoautotrophicum]
           Length = 318
           
 Score =  138 bits (344), Expect = 9e-32
 Identities = 103/330 (31%), Positives = 159/330 (47%), Gaps = 26/330 (7%)

Query: 5   GVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLLRDE 64
           GV +  + HA  Y     AN    L+A+S D     L K+ A KY    Y DYE LL   
Sbjct: 10  GVGAMGYNHARVYYRLKNAN----LMAVS-DIMKGTLQKV-ANKYDTVGYVDYENLLEIP 63

Query: 65  SVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMVPFN 124
            +E V + + T  H  V + A E  K +L+EKPIA TLE+ +++VK ARK G+KL     
Sbjct: 64  EIEVVSVCVPTTHHYNVVMDALEHDKHVLVEKPIAFTLEEAEDMVKTARKKGLKLGTGHV 123

Query: 125 PRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDT 184
            RF   +QKAKE+IE   IG  + +   ++ V P            F  +    G  +D 
Sbjct: 124 ERFNPAVQKAKELIENDVIG--DVVSASAKRVGP------------FPPRIKDVGVTIDL 169

Query: 185 APHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGWANPKGY 244
           A H +D + +L       VYA +G  +   + +D    + +FK+G+  +L   W  P   
Sbjct: 170 AIHDLDVMHYLFSEPVAEVYAVMGSILEKCEYEDHAEIMTKFKSGITGILEVNWLTPY-- 227

Query: 245 PYGLEIKYYIVGDDGFLDIRSAYPDFTVYQDKTEKIFWERAD-VEGIVNAFIDAIQQDKE 303
                 K  I G DG +++        VY    + +  +  + ++  + +F+ ++  D+E
Sbjct: 228 ---KRRKLAITGTDGIINVDYIDQRLDVYGKFAQDVDIKHEEPLKNEIKSFLMSVINDEE 284

Query: 304 PPITGEDALKNLAVVLAAYESSKTGKAVKV 333
           P ITGED +  L  VLAA +S++  + VKV
Sbjct: 285 PEITGEDGIYALRTVLAAMKSAREHRPVKV 314


>gb|AAK43117.1| Dehydrogenase, putative [Sulfolobus solfataricus]
           Length = 355
           
 Score =  135 bits (336), Expect = 8e-31
 Identities = 107/364 (29%), Positives = 175/364 (47%), Gaps = 41/364 (11%)

Query: 2   VRFGVISYA-HPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKL 60
           +R+G+I    H         I+   + ++VA++         +  + ++  K Y DY ++
Sbjct: 3   IRYGIIGVGGHGKNRHLIPLIKLKNKVEIVAVAD--VKKERCEEVSSQFNIKCYLDYMEM 60

Query: 61  LRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM 120
           +  ES+ AV I   T  H  +AI    +G ++L++KP+   LE+ KE+V  AR  G+KLM
Sbjct: 61  VEKESLNAVSIVTPTGLHSRIAINVLNKGVNVLVDKPLGSNLEEVKEVVNTARNKGLKLM 120

Query: 121 VPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGG-G 179
           V +  RF+  LQ  KE+I  G +G+    Y    Y+     + GI T  F D   SGG G
Sbjct: 121 VGYWSRFSPALQYGKEIIHNGLLGE---PYVAYGYLVRRRGIPGIPT--FIDKTLSGGRG 175

Query: 180 GFMDTAPHGIDSLFWLTE-SEPIRVYADIGPKI----------WG------FQVDDIGTA 222
             +D   + ID+L  L +  +PI V   +  K           WG      F +DD    
Sbjct: 176 ALLDIGCYLIDNLLSLLKFRKPISVMGKVYTKFGNVKEEVKFNWGSWDPENFSLDDYAVG 235

Query: 223 LIEFKNGVIAVLTAGWANPKGYPYGLEIKYY--IVGDDGFLD--IRSAYPDFTVYQDKTE 278
           L++ +  V  +L  GW+    +   +E K Y  I+GD G ++     A  D + +  +TE
Sbjct: 236 LVKLEGDVSLILEVGWSANVSH---VEEKSYVRILGDKGGIEGSGHEAIVDIS-FHSRTE 291

Query: 279 KIFWERADV-------EGIVNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGKAV 331
               +   V         ++NAF+D+I  D+EPPITGE+++   +++   Y+SS   K V
Sbjct: 292 NFLTDTKPVLRKVDPYFEMINAFVDSILTDREPPITGEESVTLHSIIDGIYKSSTEDKEV 351

Query: 332 KVEL 335
           K+ L
Sbjct: 352 KISL 355


>pir||D71201 hypothetical protein PH1881 - Pyrococcus horikoshii
           >gi|3258320|dbj|BAA31003.1| (AP000007) 371aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 371
           
 Score =  122 bits (304), Expect = 5e-27
 Identities = 103/348 (29%), Positives = 167/348 (47%), Gaps = 40/348 (11%)

Query: 6   VISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLLRDES 65
           + + AH  ALR   TI     AK+VA+     N   AK   K+  AK +   ++ L ++ 
Sbjct: 45  IFNLAHKPALRSLRTI-----AKVVAVMD--INEEAAKKAGKELNAKVFTSLDEFL-EQD 96

Query: 66  VEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMVPFNP 125
           ++ V +   TY H E+AI+A + GK +++EKPIALT E+ ++++K A + G+KL V    
Sbjct: 97  MDVVEVLTPTYTHAEIAIKALKAGKHVIVEKPIALTSEEAEKMIKEAEEQGLKLFVGHVR 156

Query: 126 RFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDTA 185
           RF +   + KE+I+   I  ++      +++  P         W++D  KS GG  +D  
Sbjct: 157 RFDKRWTQIKEVIKTRNILPMQIRKIEVQHLPFPA------DYWYWDESKS-GGVIIDLG 209

Query: 186 PHGIDSLFWLTESEPIRVYADIGPKIWG----FQVDDIGTALIEFKNGVIAVLTAGWANP 241
            H  D L W  ESEP+ V+A +G  I G     +  D     I+F+     +    W+ P
Sbjct: 210 VHVTDFLRWFFESEPVEVFA-VGKAIRGEARVNKTYDHVVMFIKFEGNKTGIGEVSWSYP 268

Query: 242 KGYPYGLEIKYY-IVGDDGFLD-----------IRSAY--PDFTVYQDKTEKIFWERADV 287
               YG+   +  I+G +G +            I+S++  P F+       + F      
Sbjct: 269 MTPKYGVFYHHLDIIGKNGRIRYTPLDTPVVGVIKSSFEMPRFSPMLSTFPQAF------ 322

Query: 288 EGIVNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGKAVKVEL 335
           E  +  F + I+ + EP +T  DAL  L +   A ES K G+ VKVE+
Sbjct: 323 EAELRHFFECIKSNCEPVVTARDALIALQIAEKARESIKKGEPVKVEV 370


>pir||E75096 NADH-dependent dehydrogenase homolog. PAB0775 - Pyrococcus abyssi
           (strain Orsay) >gi|5458586|emb|CAB50074.1| (AJ248286)
           NADH-DEPENDENT DEHYDROGENASE HOMOLOG. [Pyrococcus
           abyssi]
           Length = 315
           
 Score =  122 bits (302), Expect = 8e-27
 Identities = 98/333 (29%), Positives = 161/333 (47%), Gaps = 29/333 (8%)

Query: 5   GVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLLRDE 64
           GV    + HA  Y+   +  +  +L+ ++    N   AK  A+ +  + ++DY +L++ E
Sbjct: 7   GVGKMGYHHARIYSELAKEGK-VELIGVAD--INFERAKEVAETFKTRAFKDYRELIK-E 62

Query: 65  SVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMVPFN 124
            V+AV IA+ T  H+EV +   E    +L+EKPIA ++E  +EI+KAA+K  V LMV   
Sbjct: 63  GVDAVSIAVPTSLHREVTMDFIENEVSVLVEKPIAESIESAQEIIKAAKKMNVVLMVGHV 122

Query: 125 PRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDT 184
            RF   + K KE IE+G +G+   I T++     PM     D            G  +D 
Sbjct: 123 ERFNPAVLKLKETIERGMLGE---IVTMTAKRVGPMVTRISDV-----------GVIIDL 168

Query: 185 APHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGWANPKGY 244
           A H ID + +LT S  I VYA         +V+D    L+ F+NG   ++      P   
Sbjct: 169 AVHDIDVMSFLTTSRVIEVYAKARNVKHPAKVEDYALILLSFENGANGIIETNRLTPH-- 226

Query: 245 PYGLEIKYYIVGDDGFLDIRSAYPDFTVYQDKTEKIFWERADVEG----IVNAFIDAIQQ 300
                    +VG +G   +     + T+Y +  E I+  + + E      +  F++ +++
Sbjct: 227 ---KTRTLNVVGTEGIAYLDYINQELTLYNE--EWIYKAKINKEEPLKLEIEHFLECVKE 281

Query: 301 DKEPPITGEDALKNLAVVLAAYESSKTGKAVKV 333
            K+P + GE+ L  L V + A ESSK  + V+V
Sbjct: 282 GKKPLVGGEEGLHALKVAVKALESSKKDEVVRV 314


>sp|O05389|YRBE_BACSU HYPOTHETICAL 37.8 KDA PROTEIN IN CSBX-NADA INTERGENIC REGION (ORF1)
           >gi|7429795|pir||D69972 opine catabolism homolog yrbE -
           Bacillus subtilis >gi|2635242|emb|CAB14737.1| (Z99118)
           similar to opine catabolism [Bacillus subtilis]
           >gi|6977802|emb|CAB75327.1| (Y15896) hypothetical
           protein [Bacillus subtilis]
           Length = 341
           
 Score =  121 bits (300), Expect = 1e-26
 Identities = 94/295 (31%), Positives = 138/295 (45%), Gaps = 33/295 (11%)

Query: 56  DYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKA 115
           DY  LL D  ++A++I   T  H ++   AAE  K I  EKP++ +L++  E + A RK 
Sbjct: 57  DYRDLLHDPDIDAIFICSPTAVHAQMIKEAAEAKKHIFCEKPVSFSLDETSEALAAVRKH 116

Query: 116 GVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKK 175
           GV L V FN RF    +K K ++E GEIG    +   S   +PP            D  +
Sbjct: 117 GVTLQVGFNRRFDPHFKKIKTIVENGEIGTPHLLKITSRDPEPPN----------IDYVR 166

Query: 176 SGGGGFMDTAPHGIDSLFWLTESEPIRVYAD----IGPKIWGFQVDDIGTALI--EFKNG 229
           + GG FMD + H  D   ++  SE   VYA     + P     ++ DI TA+I   F+NG
Sbjct: 167 TSGGLFMDMSIHDFDMARYIMGSEVTEVYAKGAALVNPSF--AELGDIDTAVITLTFENG 224

Query: 230 VIAVLTAGWANPKGYPYGLEIKYYIVGDDGFLDIRSAYP--------DFTVYQDKTEKIF 281
            +AV+     N +   YG + +  + G  G     ++ P        DF V +DK    F
Sbjct: 225 AMAVID----NSRQAVYGYDQRVEVFGTKGSAAADNSRPTTVEVSTADF-VMKDKPHFFF 279

Query: 282 WER--ADVEGIVNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGKAVKVE 334
            ER     E  +  F +AI  ++E P TG D L+   +  AA +S   G  V +E
Sbjct: 280 LERYKDSYEEEILRFAEAIGTNQETPCTGNDGLQAGRIARAAQQSLAFGMPVSIE 334


>gb|AAK43149.1| Dehydrogenase, putative [Sulfolobus solfataricus]
           Length = 371
           
 Score =  120 bits (297), Expect = 3e-26
 Identities = 99/354 (27%), Positives = 168/354 (46%), Gaps = 31/354 (8%)

Query: 1   MVRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKL 60
           +V  G I   H  AL+     +     KLVA+        +A+    +YG  +Y   +++
Sbjct: 24  VVGLGSIGKTHVKALKDLE--KETEFVKLVAVVDQ--IKAIAEKIGSEYGTPYYTTIDEV 79

Query: 61  LRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM 120
           LR+  V+ + IA  +Y H   AI A E GK +++EKP+A TL   +E+V  A +  VKL 
Sbjct: 80  LRNSEVDVISIATPSYLHAPQAILAIEYGKHVIVEKPMATTLAGAREMVSRAERNEVKLG 139

Query: 121 VPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEG------IDTSWFFDIK 174
           V F  R+   +++ K  I K E+G+   IY I   +K    ++G      I  SW     
Sbjct: 140 VIFQERYAPDIRRLKNDILK-ELGR---IYLIESELKWYRDMKGYYKRDEIARSWRGMWN 195

Query: 175 KSGGGGFMDTAPHGIDSLFWLT-ESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAV 233
             GGG   +   H ID + WL  E E +  + D      G +V+D   A++ +KNG +  
Sbjct: 196 TEGGGVMTNQGIHTIDLMIWLNGEVEEVSGFVD-NLTHDGIEVEDTAVAIMRYKNGALGT 254

Query: 234 LTAGWA-NPKGYPYGLEIKYYIVGDDGFLDIRSAYPDFTVYQDKTEK----IFWERADV- 287
           ++   +  P  Y Y    K  + G +GF++I          + K E+    + +++  + 
Sbjct: 255 ISQTVSMKPTTYQYR---KIRVNGSNGFVEITDGSLSTVAIEGKIEESKSSVEYKKETIA 311

Query: 288 ------EGIVNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGKAVKVEL 335
                 + ++  F+ A+ +D + PI G++ +K+L V+ A Y SS   + VK+ L
Sbjct: 312 QPGNLHKELLRDFLRALSEDNDFPINGKEGMKSLEVIKAVYLSSVNRQVVKLPL 365


>pir||A75025 NADH-dependent dyhydrogenase related protein PAB1138 - Pyrococcus
           abyssi (strain Orsay) >gi|5459153|emb|CAB50639.1|
           (AJ248288) NADH-dependent DYHYDROGENASE RELATED PROTEIN
           [Pyrococcus abyssi]
           Length = 341
           
 Score =  116 bits (287), Expect = 5e-25
 Identities = 100/348 (28%), Positives = 165/348 (46%), Gaps = 40/348 (11%)

Query: 6   VISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLLRDES 65
           + + AH  AL+   TI     AK+VA+     +   A+   K+  AK +   ++ L ++ 
Sbjct: 15  IFNLAHKPALKSLRTI-----AKVVAVMD--IDEEAARKAGKELNAKVFTSLDEFL-EQD 66

Query: 66  VEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMVPFNP 125
           +  V I   TY H E+AI A + GK +++EKPIALT+E+ ++++K A    +KL V    
Sbjct: 67  MNVVEILTPTYTHAELAIEALKAGKHVIVEKPIALTVEEAEKMIKEAENQELKLFVGHVR 126

Query: 126 RFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDTA 185
           RF +   + K++I+   I  ++      +++  P         W++D  KS GG  +D  
Sbjct: 127 RFDKRWIQIKDIIKSRNILPMQIRKIEVQHLPFPA------DYWYWDESKS-GGVIVDLG 179

Query: 186 PHGIDSLFWLTESEPIRVYADIGPKIWG----FQVDDIGTALIEFKNGVIAVLTAGWANP 241
            H  D L W  ESEPI V+A +G  I G     +  D     I+F+ G   +    W+ P
Sbjct: 180 VHVTDFLRWFFESEPIEVFA-VGKAIRGEARVNKTHDHVVMFIKFEGGKTGIGEVSWSYP 238

Query: 242 KGYPYGLEIKYY-IVGDDGFLD-----------IRSAY--PDFTVYQDKTEKIFWERADV 287
               YG+   +  I+G +G +            ++S++  P F+       + F      
Sbjct: 239 MPPKYGVFYHHLDIIGKNGRIRYTPMDTPVVGVVKSSFEMPRFSPMLSTFPQAF------ 292

Query: 288 EGIVNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGKAVKVEL 335
           E  +  F + I+   EP +T +DAL  L +   A ES K G+ VKVE+
Sbjct: 293 EAELRHFFECIKSSCEPVVTAQDALIALKIAEKAKESIKKGEPVKVEV 340


>pir||S70672 dehydrogenase homolog - Bordetella pertussis
           >gi|992971|emb|CAA62245.1| (X90711) gene referred to as
           bplA in Mol. Microbiol. 19:37-52(1996) [Bordetella
           pertussis] >gi|3451515|emb|CAA07671.1| (AJ007747)
           putative oxidoreductase [Bordetella bronchiseptica]
           >gi|1589221|prf||2210367C bplA gene [Bordetella
           pertussis]
           Length = 350
           
 Score =  113 bits (280), Expect = 3e-24
 Identities = 97/353 (27%), Positives = 160/353 (44%), Gaps = 33/353 (9%)

Query: 2   VRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLL 61
           +RFG++           A  +   RA+LV I  D     L   EA   GA+ +     +L
Sbjct: 11  IRFGLVGCGRISKNHIGAIAQHGDRAELVEIC-DTNPEALQAAEAAT-GARPFSSLSDML 68

Query: 62  RDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMV 121
              + +A+ +A  +  H   AI  A+ G+ ++ EKP+A   EDGK +VKA  +AGV+L V
Sbjct: 69  AQGNADALVLATPSGLHPWQAIEVAQAGRHVVSEKPMATRWEDGKRMVKACDEAGVRLFV 128

Query: 122 PFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGGF 181
               R    LQ  K+ IE+G  G++ Y+ T++ +   P   E  D + +    +  GG F
Sbjct: 129 VKQNRRNATLQLVKKAIEQGRFGRI-YMVTVNVFWTRPQ--EYYDAARWRGKWEWDGGAF 185

Query: 182 MDTAPHGIDSLFWLTESEPIR-VYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGWAN 240
           M+ A H +D L WL    P+  VYA         + +D G A + +++G +  +      
Sbjct: 186 MNQASHYVDLLDWLV--GPVESVYAYTATLARRIEAEDTGVAALRWRHGAMGSINVTMLT 243

Query: 241 PKGYPYGLEIKYYIVGDDGFLDI-------------RSAYPDFTVYQDKTEKIFWERADV 287
              YP  LE    I+G+ G + +                +PD     DK  +  +E   V
Sbjct: 244 ---YPQNLEGSITILGEKGTVRVGGVAVNRIDEWKFAEPHPD----DDKIREANYETTSV 296

Query: 288 EGI-----VNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGKAVKVEL 335
            G       +  I+ ++ D EP   G + L++LA++ A Y S++ G  + + L
Sbjct: 297 YGFGHPLYYDNVINCLRGDCEPETDGREGLQSLALLTAIYRSARDGVRIPLPL 349


>pir||B72359 lipopolysaccharide biosynthesis protein BplA - Thermotoga maritima
           (strain MSB8) >gi|4981103|gb|AAD35670.1|AE001733_7
           (AE001733) lipopolysaccharide biosynthesis protein BplA
           [Thermotoga maritima]
           Length = 360
           
 Score =  111 bits (276), Expect = 9e-24
 Identities = 82/299 (27%), Positives = 141/299 (46%), Gaps = 38/299 (12%)

Query: 56  DYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKA 115
           +Y +LL+ E V+ + IA E+ +H ++ + A E GK +L+EKP+AL+ +   E+V+ +++ 
Sbjct: 62  NYRELLKREDVDVISIATESGKHYQITMEALEAGKHVLVEKPMALSTKHMNEMVELSKQK 121

Query: 116 GVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKK 175
            +KL V F  RF  P+Q+ ++ ++ G  GK+ Y      + +   + +    SW     +
Sbjct: 122 NLKLGVFFQNRFNPPVQEVRKKLDSGAFGKIFYASVAVRWNRNEDYYK--QASW-RGTWE 178

Query: 176 SGGGGFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGF-QVDDIGTALIEFKNGVIAVL 234
             GG  M+ + H ID L W    E   +Y  I      + + +D G A+++FK G   ++
Sbjct: 179 MDGGVLMNQSTHAIDLLQWFLGGEIEEIYGHIANTNHPYIEAEDEGFAIVKFKGGKTGLI 238

Query: 235 TAGWANPKGYPYGLEIKYYIVGDDGFLDIRSA--------------------YPD-FTVY 273
               A    +P  LE    I G+ G + I                        PD  TVY
Sbjct: 239 E---ATSNVFPRNLEETLAIFGEKGTVVIGGIAVNRILTWRFEGEEGHPFMNLPDPDTVY 295

Query: 274 QDKTEKIFWERADVEGIVNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGKAVK 332
            D  + ++ +          F +A+  D++P I+GED  K + +VL  Y S   G+ VK
Sbjct: 296 GDSHKYVYRD----------FYEAVTNDRKPYISGEDGKKAVEIVLGIYRSFLEGRPVK 344


>gb|AAC23913.1| (AF039207) NADH-dependent dehydrogenase homolog [Listeria
           monocytogenes]
           Length = 358
           
 Score =  109 bits (270), Expect = 4e-23
 Identities = 85/324 (26%), Positives = 148/324 (45%), Gaps = 43/324 (13%)

Query: 42  AKIEAKKYG---AKFYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPI 98
           A+  AK++G   A  Y +Y +LL+D+S++ +++      H E++I A E GK ++ EKP+
Sbjct: 41  AEAAAKEFGGENASVYTNYVELLQDKSIDVIHVCTPNISHAEISIAAMEAGKHVMCEKPM 100

Query: 99  ALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKP 158
           A T  + K +++AA + G KL + +  RF +      ++ E GE+G +        Y K 
Sbjct: 101 AKTTAEAKSMIEAAERTGKKLTIGYQNRFRKDSDYLHQVCENGELGDI-------YYAKA 153

Query: 159 PMFLEGIDTSW--FFDIKKSGGGGFMDTAPHGIDSLFWLTES-EPIRVYADIGPKI---- 211
                    +W  F D +  GGG  +D   H +D   W+ ++ +P  V  +   K+    
Sbjct: 154 KAIRRRAVPTWGVFLDEEAQGGGPLIDIGTHALDLTLWMMDNYKPKYVVGNSYHKLAKKE 213

Query: 212 -----WG------FQVDDIGTALIEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGDDGF 260
                WG      F V+D     I  +NG   VL A WA       G E +  + G +G 
Sbjct: 214 NAANAWGSWDPNKFTVEDSAFGFITMENGATIVLEASWA-LNTLDVG-EARTSLSGTEGG 271

Query: 261 LDIR-----SAYPDFTVYQDKTE------KIFWERADVEGIVNA--FIDAIQQDKEPPIT 307
            D+      +      +Y+ K +        +    D   ++ A  ++ AI+++ +P + 
Sbjct: 272 ADMEDGLRINGEAHSQMYEKKIQLEAGGVDFYDGTGDDPALIEAGQWLGAIEKNTDPVVK 331

Query: 308 GEDALKNLAVVLAAYESSKTGKAV 331
              A+    ++ A YESSKTG+ V
Sbjct: 332 PGQAIVVTQILEAIYESSKTGQPV 355


>pir||D72381 dehydrogenase - Thermotoga maritima (strain MSB8)
           >gi|4980919|gb|AAD35499.1|AE001720_13 (AE001720)
           dehydrogenase [Thermotoga maritima]
           Length = 334
           
 Score =  105 bits (259), Expect = 9e-22
 Identities = 92/346 (26%), Positives = 151/346 (43%), Gaps = 29/346 (8%)

Query: 2   VRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLL 61
           +R GVI       + +A  ++    A L AIS D     L +++ K    K Y+D  +L+
Sbjct: 1   MRIGVIGLGRIGTI-HAENLKMIDDAILYAIS-DVREDRLREMKEKLGVEKAYKDPHELI 58

Query: 62  RDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMV 121
            D +V+AV +   T  H E+ I  A+  K +  EKP++L L D   +++  +KA V L  
Sbjct: 59  EDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFT 118

Query: 122 PFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGGF 181
            FN RF +  +K KE +E G IGK   +   S    PP            D  +  GG F
Sbjct: 119 GFNRRFDRNFKKLKEAVENGTIGKPHVLRITSRDPAPPP----------LDYIRVSGGIF 168

Query: 182 MDTAPHGIDSLFWLTESEPIRVYAD----IGPKIWGFQVDDIGTALIEFKNGVIAVLTAG 237
           +D   H  D   ++   E   V+AD    +  +I      D    ++ FK+G + V+   
Sbjct: 169 LDMTIHDFDMARYIMGEEVEEVFADGSVLVDEEIGKAGDVDTAVVVLRFKSGALGVID-- 226

Query: 238 WANPKGYPYGLEIKYYIVGDDGFLDIRSAYPDFTVYQDKTEK-------IFWERADVEGI 290
             N +   YG + +  + G  G +   +      V  D+           F ER     +
Sbjct: 227 --NSRRAVYGYDQRIEVFGSKGRIFADNVRETTVVLTDEQGDRGSRYLYFFLERYRDSYL 284

Query: 291 --VNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGKAVKVE 334
             +  FI  ++  + P ++GED    L +  AA +S +  ++VK+E
Sbjct: 285 EELKTFIKNVKSGEPPAVSGEDGKMALLLGYAAKKSLEEKRSVKLE 330


>pir||B75475 glucose-fructose oxidoreductase - Deinococcus radiodurans  (strain
           R1) >gi|6458511|gb|AAF10376.1|AE001934_7 (AE001934)
           glucose-fructose oxidoreductase [Deinococcus
           radiodurans]
           Length = 398
           
 Score =  104 bits (257), Expect = 2e-21
 Identities = 77/290 (26%), Positives = 142/290 (48%), Gaps = 23/290 (7%)

Query: 54  YQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAAR 113
           Y D+EKL   + VEAVYI +    H+E   RAA+ GK +L EKP+++  +D + +V A R
Sbjct: 100 YDDFEKLAGRDDVEAVYIVLPNSLHREYVERAAKMGKHVLCEKPLSVNEQDAQAMVDACR 159

Query: 114 KAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDI 173
            A V LM  +  ++T     A++ ++ G++GK++ + +I       +  E   + W   +
Sbjct: 160 AANVLLMTAYRCQYTPEHWAARDAVQGGKLGKVKLLDSIH------VQSEDDPSVWRLKL 213

Query: 174 KKSGGGGFMDTAPHGIDSLFWLTESEPIRVYADI----GPKIWGFQVDDIGTALIEFKNG 229
             +GGG   D   + ++ + ++   EP  V+A +    G   +G +V++  +A++ F  G
Sbjct: 214 DLAGGGPLPDVGLYSVNIIRFVLGQEPEWVFAALHQPEGDPRFG-EVEESVSAMLGFPGG 272

Query: 230 VIAVLTAGWANPKGYPYGLEIKYYIVGDDGFLDIRSAYP------DFTVYQDKTEKIFWE 283
           VIA +   +   K           ++G++G L +  A+P      + T         F E
Sbjct: 273 VIANVLTSYGALK------TTTLRVMGEEGSLLMDPAFPYDGLGLEITTDDGTFSPSFPE 326

Query: 284 RADVEGIVNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGKAVKV 333
                   + F   ++  + P   GE+ + +  V+ A YES++TGK V++
Sbjct: 327 YDQFSREFDHFAQCVRGGQTPWTPGEEGVADHRVMDAIYESARTGKRVEL 376


>dbj|BAB07562.1| (AP001520) oxidoreductase [Bacillus halodurans]
           Length = 334
           
 Score =  102 bits (253), Expect = 4e-21
 Identities = 96/342 (28%), Positives = 155/342 (45%), Gaps = 40/342 (11%)

Query: 2   VRFGVISYAHPHALRYAATIRANRRAKLVAISG----DGANSGLAKIEAKKYGAKFYQDY 57
           VR+G++  A     +    I+    A++VA+S     + AN    + +  K     Y  Y
Sbjct: 5   VRWGILGTAGIAKKQLIPAIKRASNAEVVAVSSRNDMEKANCYADECDIPKR----YARY 60

Query: 58  EKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGV 117
           E LL D  ++AVYI +  + H   A +AAE GK +L EKP ALT  + KE+V A    GV
Sbjct: 61  EDLLNDPDIDAVYIPLPNHLHLTWAKKAAEHGKHVLCEKPAALTAAEAKEMVDACAAHGV 120

Query: 118 KLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSG 177
             M  F  +F     + K +I+ G+IG++  I +   +  P      ++ +     ++ G
Sbjct: 121 VFMEAFMYQFHPQHGEVKRLIDSGKIGEVRLIRSNFSFQLP------LEANNIRLNREMG 174

Query: 178 GGGFMDTAPHGIDSLFWLTESEPIRVYAD--IGPKIWGFQVDDIGTALIEFKNGVIAVLT 235
           GG   D   + I    +LT  EP+  Y    + P++    VD   T +++ + GV +V T
Sbjct: 175 GGSLYDVGCYCIHLTRYLTGKEPVHAYGTGYLHPEL---GVDTSFTGVLQMEGGVTSVFT 231

Query: 236 AGWANPKGYPYGLEIKYYIVGDDGFLDIRSAY-PDFTVYQDKTEKIFWERAD-------V 287
           + +  P       +  Y +VG +G + +  A+ PD   +QD T  I    +D       V
Sbjct: 232 SSFEQP------ADDSYEVVGTEGTIIVPYAFRPD--KHQDGTGVIIVRTSDGREETLSV 283

Query: 288 EG-----IVNAFIDAIQQDKEPPITGEDALKNLAVVLAAYES 324
           +G      V    DAI         GE+ + N++VV A   S
Sbjct: 284 QGDQYRLQVEHVSDAILNGTPLLYPGEETVNNMSVVEACLHS 325


>emb|CAB60174.1| (AL132824) putative dehydrogenase [Streptomyces coelicolor]
           Length = 337
           
 Score =  102 bits (252), Expect = 6e-21
 Identities = 81/278 (29%), Positives = 118/278 (42%), Gaps = 20/278 (7%)

Query: 66  VEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMVPFNP 125
           V+AV I   T  H E+  RAA  G  +  EKPIAL L    + +     AG  L + F  
Sbjct: 61  VDAVVITTATPAHAELIGRAARSGLPVFCEKPIALDLPGTLQAIAEVEAAGTVLQMGFQR 120

Query: 126 RFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDTA 185
           RF      A+E +  G +G+L  +  ++    PP            D     GG + DT 
Sbjct: 121 RFDTGYTGAREAVRSGRLGRLHTVRAVTSDQTPPP----------ADYLPQSGGLYRDTL 170

Query: 186 PHGIDSLFWLTESEPIRVYA---DIGPKIWGFQVD-DIGTALIEFKNGVIAVLTAGWANP 241
            H  D L W+T  E + VYA   D GP ++    D D G  L+   +G +A  TA   N 
Sbjct: 171 IHDFDVLRWVTGREVVDVYAAGSDAGPPMFRAADDVDTGAVLLTLDDGTLATATAARLNG 230

Query: 242 KGYPYGL----EIKYYIVGDDGFLDIRSAYPDFTVYQDKTEKIFWER--ADVEGIVNAFI 295
            GY   +    E+   +VG D    I S  P      DK    F ER     E  +  F+
Sbjct: 231 AGYDVRMELAGELDQIVVGLDDRTPIASTEPTGPPAADKPWTGFVERFGPAYEAELTTFV 290

Query: 296 DAIQQDKEPPITGEDALKNLAVVLAAYESSKTGKAVKV 333
             ++ ++  P  G +AL+ L +  A   S +  + V++
Sbjct: 291 QVVRGERANPCDGREALQALRIAEACDVSRRERRPVRL 328


>sp|P40332|YISS_BACSU HYPOTHETICAL 37.5 KD PROTEIN IN DEGA-NPRB INTERGENIC REGION
           >gi|7429794|pir||B69838 myo-inositol 2-dehydrogenase
           homolog yisS - Bacillus subtilis
           >gi|1934841|emb|CAB07962.1| (Z93940) unknown [Bacillus
           subtilis] >gi|2145385|emb|CAA70648.1| (Y09476) YisS
           [Bacillus subtilis] >gi|2633420|emb|CAB12924.1| (Z99109)
           alternate gene name: yuxD, yucG~similar to myo-inositol
           2-dehydrogenase [Bacillus subtilis]
           Length = 342
           
 Score =  102 bits (251), Expect = 8e-21
 Identities = 97/326 (29%), Positives = 152/326 (45%), Gaps = 37/326 (11%)

Query: 27  AKLVAISGDGANSGLAKIEAKKYGA-KFYQDYEKLLRDESVEAVYIAIETYRHKEVAIRA 85
           AKLV + GD    G A+  A++ G  K+ +D  ++L D  ++AV I   T  H ++ I+A
Sbjct: 30  AKLVCV-GDPLK-GRAEQVARELGIEKWSEDPYEVLEDPGIDAVIIVTPTSTHGDMIIKA 87

Query: 86  AEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGK 145
           AE GK I +EKP+ L+LE+ K   +  ++ GV   V F  RF      AK  I+ GEIGK
Sbjct: 88  AENGKQIFVEKPLTLSLEESKAASEKVKETGVICQVGFMRRFDPAYADAKRRIDAGEIGK 147

Query: 146 LEYI--YTISEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLTESEPIRV 203
             Y   +T  +   P  F+            K  GG F+D + H  D   +L  +E   V
Sbjct: 148 PIYYKGFTRDQGAPPAEFI------------KHSGGIFIDCSIHDYDIARYLLGAEITSV 195

Query: 204 --YADIGPKIWGFQVDDIGTAL--IEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGDDG 259
             +  I    +  Q  D+  AL  IEF +G    + A     +  PYG +I+  ++G +G
Sbjct: 196 SGHGRILNNPFMEQYGDVDQALTYIEFDSGAAGDVEAS----RTSPYGHDIRAEVIGTEG 251

Query: 260 FLDIRS-AYPDFTVYQDKTEKI---------FWERADVEGIVNAFIDAIQQDKEPPITGE 309
            + I +  +   T+   K             F E   +E  +  F + ++  K P +T  
Sbjct: 252 SIFIGTLRHQHVTILSAKGSSFDIIPDFQTRFHEAYCLE--LQHFAECVRNGKTPIVTDI 309

Query: 310 DALKNLAVVLAAYESSKTGKAVKVEL 335
           DA  NL V +AA  S + G  V++++
Sbjct: 310 DATINLEVGIAATNSFRNGMPVQLDV 335


>gb|AAD41367.1|AF151698_4 (AF151698) putative oxidoreductase [Agrobacterium tumefaciens]
           Length = 335
           
 Score = 99.1 bits (243), Expect = 7e-20
 Identities = 88/345 (25%), Positives = 151/345 (43%), Gaps = 35/345 (10%)

Query: 2   VRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYG-AKFYQDYEKL 60
           +R+GV+  A   A      I+++R  ++VAI+   A    AK    ++G A+ Y  YE L
Sbjct: 5   IRWGVLGCAGIAAKAVIPAIQSSRLGRVVAIASRDAAK--AKEMTARFGIARSYGSYEDL 62

Query: 61  LRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM 120
           L D  ++A+Y  +  + H  + I+A E+GK +L EKPIAL     +E+  A + A + + 
Sbjct: 63  LADPEIDAIYNPLPNHLHVPMTIKALEQGKPVLCEKPIALDAAQARELATAQKAASLPVA 122

Query: 121 VPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYV--KPPMFLEGIDTSWFFDIKKSGG 178
             F  R     +KA  +I +G +G++  I TI  Y    P      +D          GG
Sbjct: 123 EAFMVRHHPQWKKAHALITEGRLGEVRAIQTIFSYYLDDPGNVRNQVDI---------GG 173

Query: 179 GGFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGW 238
           GG  D   + I++  +L ++EP+R  A +  +   F  D + + L+ F  G     T   
Sbjct: 174 GGLFDVGCYAINTARFLFDAEPLRAIA-LMERDPVFGTDRLTSGLLAFPEGKQLAFTC-- 230

Query: 239 ANPKGYPYGLEIKYYIVGDDGFLDIRSAY------PDFTVYQDKTEKIFWERADV----- 287
                    L  K  ++G  G L+I   +      P   ++ D  +     R ++     
Sbjct: 231 ----STQLSLTQKVTVLGTRGRLEIPIPFNAPADEPTVLIFDDGRDLAGGGREEIMIGPV 286

Query: 288 ---EGIVNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGK 329
                  +AF +A+   K       DA+ N   + A + S+ +G+
Sbjct: 287 DQYREQADAFAEAVLSGKPLETDLGDAIANTKAIDALFRSAASGR 331


>emb|CAB02496.1| (Z80356) glucose-fructose oxidoreductase [Zymomonas mobilis]
           Length = 433
           
 Score = 97.1 bits (238), Expect = 3e-19
 Identities = 78/316 (24%), Positives = 144/316 (44%), Gaps = 28/316 (8%)

Query: 38  NSGLAKIEAKKYGAK-----FYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDI 92
           N+  AKI A +YG        Y +++K+ +D  ++AVYI +    H E AIRA + GK +
Sbjct: 118 NAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHV 177

Query: 93  LLEKPIALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTI 152
           + EKP+A ++ D + ++ AA+ A  KLM+ +   +    + A ++I + ++GKL  + T 
Sbjct: 178 MCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTD 237

Query: 153 SEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLTESEPI--RVYADIGPK 210
           +  V   M        W    + +GGG  MD   +G++   +L   EPI  R Y    P 
Sbjct: 238 NSDV---MDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPN 294

Query: 211 IWGF-QVDDIGTALIEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGDDGFL--DIRSAY 267
              F +V+D     + F++G ++           Y      ++ + GD   L  D  + Y
Sbjct: 295 DERFVEVEDRIIWQMRFRSGALS------HGASSYSTTTTSRFSVQGDKAVLLMDPATGY 348

Query: 268 ---------PDFTVYQDKTEKIFWERADVEGIVNAFIDAIQQDKEPPITGEDALKNLAVV 318
                    P         + I          ++   +A+  +K     GE+ ++++ ++
Sbjct: 349 YQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLI 408

Query: 319 LAAYESSKTGKAVKVE 334
            A YE+++TG+ V  +
Sbjct: 409 QAIYEAARTGRPVNTD 424


>pdb|1OFG|A Chain A, Glucose-Fructose Oxidoreductase >gi|2098324|pdb|1OFG|B
           Chain B, Glucose-Fructose Oxidoreductase
           >gi|2098325|pdb|1OFG|C Chain C, Glucose-Fructose
           Oxidoreductase >gi|2098326|pdb|1OFG|D Chain D,
           Glucose-Fructose Oxidoreductase >gi|2098327|pdb|1OFG|E
           Chain E, Glucose-Fructose Oxidoreductase
           >gi|2098328|pdb|1OFG|F Chain F, Glucose-Fructose
           Oxidoreductase
           Length = 381
           
 Score = 97.1 bits (238), Expect = 3e-19
 Identities = 78/316 (24%), Positives = 144/316 (44%), Gaps = 28/316 (8%)

Query: 38  NSGLAKIEAKKYGAK-----FYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDI 92
           N+  AKI A +YG        Y +++K+ +D  ++AVYI +    H E AIRA + GK +
Sbjct: 66  NAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHV 125

Query: 93  LLEKPIALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTI 152
           + EKP+A ++ D + ++ AA+ A  KLM+ +   +    + A ++I + ++GKL  + T 
Sbjct: 126 MCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTD 185

Query: 153 SEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLTESEPI--RVYADIGPK 210
           +  V   M        W    + +GGG  MD   +G++   +L   EPI  R Y    P 
Sbjct: 186 NSDV---MDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPN 242

Query: 211 IWGF-QVDDIGTALIEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGDDGFL--DIRSAY 267
              F +V+D     + F++G ++           Y      ++ + GD   L  D  + Y
Sbjct: 243 DERFVEVEDRIIWQMRFRSGALS------HGASSYSTTTTSRFSVQGDKAVLLMDPATGY 296

Query: 268 ---------PDFTVYQDKTEKIFWERADVEGIVNAFIDAIQQDKEPPITGEDALKNLAVV 318
                    P         + I          ++   +A+  +K     GE+ ++++ ++
Sbjct: 297 YQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLI 356

Query: 319 LAAYESSKTGKAVKVE 334
            A YE+++TG+ V  +
Sbjct: 357 QAIYEAARTGRPVNTD 372


>sp|Q07982|GFO_ZYMMO GLUCOSE--FRUCTOSE OXIDOREDUCTASE PRECURSOR (GFOR)
           >gi|95542|pir||A42289 glucose-fructose oxidoreductase
           (EC 1.1.-.-) precursor - Zymomonas mobilis
           >gi|155588|gb|AAA27690.1| (M97379) glucose-fructose
           oxidoreductase [Zymomonas mobilis]
           Length = 439
           
 Score = 96.7 bits (237), Expect = 3e-19
 Identities = 77/312 (24%), Positives = 142/312 (44%), Gaps = 29/312 (9%)

Query: 42  AKIEAKKYGAK-----FYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEK 96
           AKI A +YG        Y +++K+ +D  ++AVYI +    H E AIR+ + GK ++ EK
Sbjct: 121 AKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRSFKAGKHVMCEK 180

Query: 97  PIALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYV 156
           P+A ++ D + ++ AA+ A  KLM+ +   +    + A ++I + ++GKL  + T +  V
Sbjct: 181 PMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDV 240

Query: 157 KPPMFLEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLTESEPI--RVYADIGPKIWGF 214
                L          +  SGGG  MD   +G++   +L   EPI  R Y    P    F
Sbjct: 241 MDQNDLHSSGVC----VVNSGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERF 296

Query: 215 -QVDDIGTALIEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGDDGFL--DIRSAY---- 267
            +V+D     + F++G ++           Y      ++ + GD   L  D  + Y    
Sbjct: 297 VEVEDRIIWQMRFRSGALS------HGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNL 350

Query: 268 -----PDFTVYQDKTEKIFWERADVEGIVNAFIDAIQQDKEPPITGEDALKNLAVVLAAY 322
                P         + I          ++   +A+  +K     GE+ ++++ ++ A Y
Sbjct: 351 ISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIY 410

Query: 323 ESSKTGKAVKVE 334
           E+++TG+AV  +
Sbjct: 411 EAARTGRAVNTD 422


>sp|Q44258|CBAC_ALCSB 1-CARBOXY-3-CHLORO-3,4-DIHYDROXYCYCLO HEXA-1,5-DIENE DEHYDROGENASE
           >gi|2073552|gb|AAC45718.1| (U18133)
           1-carboxy-3-chloro-3,4-dihydroxycyclohexa-1,5-diene
           dehydrogenase [Comamonas testosteroni]
           Length = 397
           
 Score = 96.3 bits (236), Expect = 4e-19
 Identities = 74/242 (30%), Positives = 123/242 (50%), Gaps = 12/242 (4%)

Query: 2   VRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLL 61
           +R GV+       L    T   +RR +LVA S D     L + +A    A  + D E L 
Sbjct: 1   MRIGVVGLGKAFMLMLP-TFLMDRRVQLVAAS-DTDPLSLRQFKADFPAAAVHGDIESLC 58

Query: 62  RDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMV 121
           ++  VE VYI      H   A  A   GK +L+EKP+A+TLED   +   A++AG  L+V
Sbjct: 59  KNPDVEVVYIGTPHQFHAVHAEIALNAGKHVLVEKPMAVTLEDCCRMNACAQRAGKYLIV 118

Query: 122 PFNPRFTQPLQKAKEMIEKGEIGKLEYIYTI--SEYVKPPMFLEGIDTSWFFDIKKSGGG 179
             +  F  P+ +AKE+I+ G  G++ +I+++  ++++  P   E ++T         GGG
Sbjct: 119 GHSHSFDHPISRAKELIDSGRYGRVRFIHSMNYTDFLYRPRRAEELNTD-------LGGG 171

Query: 180 GFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLT-AGW 238
              + A H +D +  L +   + V + +G      + +   +ALI+F NGV A +T +G+
Sbjct: 172 VVFNQASHQLDVIRLLAQGRVVDVSSYLGRWDAARRTEGAYSALIKFDNGVAANVTYSGY 231

Query: 239 AN 240
           A+
Sbjct: 232 AH 233


>gb|AAK43115.1| Dehydrogenase, putative [Sulfolobus solfataricus]
           Length = 319
           
 Score = 96.0 bits (235), Expect = 6e-19
 Identities = 84/313 (26%), Positives = 148/313 (46%), Gaps = 22/313 (7%)

Query: 21  IRANRRAKLVAISGDGANSGLAKIEAKKYGAK-FYQDYEKLLRDESVEAVYIAIETYRHK 79
           +RA R    +       N   A+   K++ A+ ++  YE +++  +V+ V + +   +H 
Sbjct: 16  LRAMRNISGIEYYVFSRNEEKARECMKEFNAEGYFTRYEDVIKS-NVDIVDLLVSHDQHY 74

Query: 80  EVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIE 139
            + + A + GK ++LEKPIA T+E+   ++  ++    K MV     F   ++KAKE++ 
Sbjct: 75  PMGVMAMKAGKHLMLEKPIARTIEEAMGLINTSKDTKRKFMVLEQFYFESSVRKAKELLP 134

Query: 140 KGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWL-TES 198
           +  +G L  I   S ++  P         W  + +K GGG  +D   H ID+L  L  E 
Sbjct: 135 R--LGNLSLIIVRSIHLYQP-------KGWRREKEKMGGGALIDGGVHFIDTLLNLGGEY 185

Query: 199 EPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGWANPKGYPYGLEIKYY----- 253
           E +R     G    G + +D+  A + F+ G + +L   W  P   P     + Y     
Sbjct: 186 ESVR--GVCGKYFSGIEGEDLTLATLRFRKGHLGLLMYSWTTPNP-PKVPAFEIYGENGS 242

Query: 254 IVGDDGFLDIRSAYPDFTVYQD-KTEKIFWERAD-VEGIVNAFIDAIQQDKEPPITGEDA 311
           I+ D     +  AY D  +  D K E+I  E+ + +E  +  F+ A++ + E P+  E A
Sbjct: 243 IIEDPNTRVMGKAYGDLILNVDGKEERIEVEKVNPIEEEIRGFVKAVKNNTEVPMPPEIA 302

Query: 312 LKNLAVVLAAYES 324
           L++L  VL  Y+S
Sbjct: 303 LRDLKAVLDIYKS 315


>emb|CAB88961.1| (AL353864) putative oxidoreductase. [Streptomyces coelicolor A3(2)]
           Length = 358
           
 Score = 95.2 bits (233), Expect = 1e-18
 Identities = 77/282 (27%), Positives = 125/282 (44%), Gaps = 21/282 (7%)

Query: 42  AKIEAKKYGAKFYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALT 101
           AK  A+++GA+     E +     V+ V IA  T  H ++ + A E G  +  EKP+A T
Sbjct: 62  AKAAAERFGAEVADSPEAVFA-AGVDGVVIAAATDAHPDLILAAVEAGVPVFCEKPVART 120

Query: 102 LEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMF 161
           + +G E++KA     V + + +  RF      A+  +  GE+G L  + + +    PP  
Sbjct: 121 MAEGVEVLKALAGRDVPVQIGYQRRFDTGFAAARAAVRSGELGPLHTVRSTTLDPAPPPA 180

Query: 162 LEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGF--QVDDI 219
                         + GG F D + H  DS+ W+T  E   VYA  G +   +  +  D 
Sbjct: 181 A----------YVAASGGIFRDCSVHDFDSIRWVTGREVGEVYAVGGNRGADYIREAGDA 230

Query: 220 GT--ALIEFKNGVIAVLTAGWANPKGYPYGLEIKYY----IVGDDGFLDIRSAYPDFTVY 273
            T  A++   +G +AV++    N +GY   +EI  +     VG +  L +RS  P  T  
Sbjct: 231 DTTGAVLTLDDGTVAVVSNSRHNARGYDVRMEIHGFDDSIAVGLEDRLPLRSVEPGVTFP 290

Query: 274 QDKTEKIFWER--ADVEGIVNAFIDAIQQDKEPPITGEDALK 313
                  F +R  A     + AF + +   +  P T EDAL+
Sbjct: 291 AGTPHDFFMDRFTAAYRAELTAFTEVVAGARPSPCTVEDALE 332


>gb|AAC01706.1| (AF040570) unknown [Amycolatopsis mediterranei]
           Length = 342
           
 Score = 94.4 bits (231), Expect = 2e-18
 Identities = 82/304 (26%), Positives = 138/304 (44%), Gaps = 22/304 (7%)

Query: 37  ANSGLAKIEAKKYGAKFYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEK 96
           ++ G ++  A ++GAK     E+ L  +  +AV I   T  H E+A+ A   G  ++ EK
Sbjct: 48  SDDGRSRELAAEFGAKAAGSLEEAL--DGADAVDICTPTASHHEIALTAIAAGVGVVCEK 105

Query: 97  PIALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEY-IYTISEY 155
           P+A + E+ +EIV AA +AGV+L    + RF  P  +  E++  G +G+     ++ S Y
Sbjct: 106 PLAASAEEAEEIVTAAERAGVRLYAAHDVRFAAPYARLHELVASGRLGEGALGRFSFSAY 165

Query: 156 VKPPMFLEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLTESEPIRVYA----DIGPKI 211
              P         W        GG   D   HG D   W+   + +RV+A    DI    
Sbjct: 166 HPRP---------WTGHASARSGGILTDQLLHGADLAHWVF-GDVVRVHACYQGDIATPA 215

Query: 212 WGFQVDDIGTALIEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGDDGFLDIRSAYP-DF 270
               V   GTA++   +G I+ + + W      P  + + +++ G  G +   S +P + 
Sbjct: 216 PEGAV-ATGTAVLTHASGAISQVVSRWTATPRPP--VRVAFHVSGTGGSVSYDSEWPQEV 272

Query: 271 TVYQDKTEKIFWERADV-EGIVNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGK 329
            V         +    V +  +  F  A     EP I  +DAL  + ++ AA ES+ TG+
Sbjct: 273 RVVDGGAGNFAYGGPSVFDTEMREFATAFAGGPEPRIGAKDALAAVRIIHAAAESAWTGR 332

Query: 330 AVKV 333
           AV++
Sbjct: 333 AVEL 336


>gb|AAD45293.1|AF156256_1 (AF156256) putative dehydrogenase [Vibrio anguillarum]
           Length = 318
           
 Score = 94.4 bits (231), Expect = 2e-18
 Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 14/260 (5%)

Query: 2   VRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLL 61
           +R  V+         + +  + +   +LVA+  +  N  + ++ + KYG   Y   + LL
Sbjct: 7   IRIAVVGCGRISKNHFGSIEQLDSEYELVAVCDN--NPEVLELHSNKYGVPGYHSIDDLL 64

Query: 62  RDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMV 121
             ++++ V +   +  H    I+AA+ G  ++ EKP+A   EDG  +VKA   AGV+L V
Sbjct: 65  ASQTLDIVTLCTPSGIHAPQTIKAAKAGVHVITEKPMATKWEDGLAMVKACDDAGVRLFV 124

Query: 122 PFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTS--WFFDIKKSGGG 179
               R    LQ  K  + +   GK+  ++    + +P  + +    S  W  D     GG
Sbjct: 125 VKQNRRNSTLQLLKRAVTEKRFGKIHMVHLNVFWTRPQEYYDRAAWSGTWHMD-----GG 179

Query: 180 GFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGWA 239
            FM+ A H +D L WL    PI     +       +V+D G   I+++NG +  +     
Sbjct: 180 AFMNQATHYVDLLHWLV--GPIETIHAMTSTHRDIEVEDTGVVNIKWRNGALGSMAVTMC 237

Query: 240 NPKGYPYGLEIKYYIVGDDG 259
               YP  LE    I G+ G
Sbjct: 238 T---YPNNLEGSITIFGEKG 254


>dbj|BAB05884.1| (AP001514) unknown conserved protein [Bacillus halodurans]
           Length = 348
           
 Score = 92.4 bits (226), Expect = 6e-18
 Identities = 79/320 (24%), Positives = 152/320 (46%), Gaps = 46/320 (14%)

Query: 42  AKIEAKKYGAKF-YQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIAL 100
           A+  A+++   + Y D  +++++  ++AV I      H+E+ I A   G  +L EKP A+
Sbjct: 45  AQAAAEQFSIPYVYNDASRMMQEVELDAVSICTPNAFHRELTIEALHAGCHVLCEKPPAI 104

Query: 101 TLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPM 160
           T+ED K++  AA++ G  L   F+ R +  ++  K  +++GE+G++ ++          +
Sbjct: 105 TVEDAKQMEAAAKETGNLLTYGFHYRHSPEVETLKRFVDEGELGEIYHVRV------QAI 158

Query: 161 FLEGIDTSWFFDIKK-SGGGGFMDTAPHGID-SLFWLTESEPIRVYADIGPKI------- 211
              GI     F  K+  GGG  +D   H +D +L+ +   EP  +      KI       
Sbjct: 159 RRRGIPGWGVFTNKELQGGGPLIDIGVHMLDTALYVMGFPEPATILGQTHRKIGTKEGVG 218

Query: 212 ----WG---FQVDDIGTALIEFKNGV-IAVLTAGWANPKGYPYGLEIKYYIVGDDGFLDI 263
               W    F ++D+   +I FKNG  + + TA  AN K   + + + ++  GD G  D+
Sbjct: 219 LLGEWNWQQFSIEDMAVGMITFKNGASLTIETAFAANVKEQDH-MNVSFF--GDKGGADL 275

Query: 264 RSAYPDFTVYQDKTEKIFWERADV-----------EGIVNAFIDAIQQDKEPPITGEDAL 312
              +P  ++YQ+K   +     D+           E  +  F+D   + ++P  T E  +
Sbjct: 276 ---FP-LSIYQEKHRTLL----DITPVYLPTYNHHEREIKHFVDCCFRLEQPLATPEQGI 327

Query: 313 KNLAVVLAAYESSKTGKAVK 332
               ++   Y+S+++GKA++
Sbjct: 328 VIQRLIQGLYQSAESGKAIQ 347


>gb|AAK43113.1| Dehydrogenase, putative [Sulfolobus solfataricus]
           Length = 363
           
 Score = 92.1 bits (225), Expect = 9e-18
 Identities = 81/324 (25%), Positives = 152/324 (46%), Gaps = 51/324 (15%)

Query: 46  AKKYGAKFYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDG 105
           ++K G K Y DY+++LR+E+ + V +A+    H  +A+ A     ++ +EKP+A + ++ 
Sbjct: 45  SQKTGCKGYLDYKEMLRNENPDLVLVAVPHSLHAIIALDAINNDANVYVEKPMATSFQEA 104

Query: 106 KEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGI 165
             +V+A+RK    L+V    RF   +  AK++I  GE+GK+ ++     Y++      GI
Sbjct: 105 LTLVEASRKRNKILVVGHENRFNPAMLIAKKLIRGGEVGKIYHMRGF--YIRQ----RGI 158

Query: 166 DTSWFFDIKK--SGGGGFMDTAPHGIDSLFWLTE----------------SEPIRVYADI 207
            TS  F IKK  + GG   D   H ID L +L++                 +  +  A  
Sbjct: 159 PTSPTF-IKKDLAKGGAVFDIGTHIIDLLLFLSDFPTPKSVTGKTYNAFSEDKTKFSAYP 217

Query: 208 GPKIWGF--QVDDIGTALIEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGDDGFLDIRS 265
            P +  F  +V+D G+A ++  + + A +   WA+   Y    +++  I+GD+G + I +
Sbjct: 218 SPNLPNFKVEVEDFGSAFLKLGDEISAYVEVSWAS---YIKENKMEVVILGDNGGIHIDN 274

Query: 266 AYPDF--------------TVYQDKTEKIFWERADVEGIVNAFIDAIQQDKEPPITGEDA 311
              +F              T  +    +  W R  +E I   F       + P  + E  
Sbjct: 275 GVLNFMRNIEDELFISSPLTQQKGSVYREVW-RTVMESISKGF------PEYPLCSAEQG 327

Query: 312 LKNLAVVLAAYESSKTGKAVKVEL 335
              +A++ + Y+S+  G+ VK+++
Sbjct: 328 AIGVAILESIYKSALEGREVKIDI 351


>sp|P09400|STRI_STRGR STREPTOMYCIN BIOSYNTHESIS PROTEIN STRI >gi|80803|pir||S17779 strI
           protein - Streptomyces griseus >gi|49268|emb|CAA68521.1|
           (Y00459) NAD:myo-inositol oxidoreductase [Streptomyces
           griseus]
           Length = 348
           
 Score = 92.1 bits (225), Expect = 9e-18
 Identities = 83/319 (26%), Positives = 141/319 (44%), Gaps = 35/319 (10%)

Query: 32  ISGDGANSGLAKIEAKKYGAKFYQDYEKLLRDE--SVEAVYIAIETYRHKEVAIRAAEEG 89
           +  DGA+    ++ A   G K     E+ L D     +A+ +A    + +   + AA  G
Sbjct: 33  VDPDGAHRLAQELAA---GTKAQVTVERELADTVTKADAIVVATPATQRRAPLLAAARAG 89

Query: 90  KDILLEKPIALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYI 149
             +  EKP+     +  E+V+A   A  +L V F  R     Q+ +E+I  GE+G++  +
Sbjct: 90  LPVFCEKPLTADETEAAELVEAL--AHTRLHVGFQRRCDPEYQRLRELIAAGELGRVLLV 147

Query: 150 YTISEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLTESEPIRVYADIGP 209
              +   +PP              +++ G  F D   H ID++ WLT    + V AD G 
Sbjct: 148 RCTAFDHRPPADA----------YEETAGDIFTDCLIHDIDAVHWLTGQPTVAVQAD-GA 196

Query: 210 KIWGFQVDDIGTALIEFKNGVIAVLTAGWANPKGYPYGLEIK----YYIVGDDGFLDIRS 265
           ++      D+ TA++   +G  AVL+A   +P GY + +E+        VG D    +R 
Sbjct: 197 RLLAGSGYDVATAVLTLADGARAVLSASRLDPHGYDHRVEVLGTKGSLSVGLDARTPLRL 256

Query: 266 AYPDFT----------VYQDKTEKIFWERADVEGIVNAFIDAIQQDKEPPITGEDALKNL 315
              D T           YQD T++     A     V AF+  + +    P TG++AL+  
Sbjct: 257 LGQDGTGCPPGPGAQPAYQDFTDRF---EAAYRREVLAFVRTVTEGAPSPCTGQEALRAQ 313

Query: 316 AVVLAAYESSKTGKAVKVE 334
            V  AA  +++TG  V+++
Sbjct: 314 RVAAAAGRAARTGTRVELD 332


>sp|Q05184|PHT4_PSEPU PUTATIVE 4,5,-DIHYDROXYPHTHALATE DEHYDROGENASE (DHP DEHYDROGENASE)
           >gi|295711|dbj|BAA02512.1| (D13229) PHT4 [Pseudomonas
           putida]
           Length = 410
           
 Score = 91.3 bits (223), Expect = 1e-17
 Identities = 71/236 (30%), Positives = 111/236 (46%), Gaps = 12/236 (5%)

Query: 2   VRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLL 61
           +R GV+       L    T  A+RR +LV    D       + E + + A  Y+  E L 
Sbjct: 12  LRLGVVGLGRAFTLMLP-TFLADRRVQLVGAC-DPREQARRQFE-RDFDAPAYETIEDLA 68

Query: 62  RDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMV 121
            D +V+A+YIA     H E    AA   K +L+EKP+AL+L++   ++    +AGVKL+V
Sbjct: 69  ADSNVDALYIASPHQFHAEHTRIAAANRKHVLVEKPMALSLDECDRMIADCAEAGVKLIV 128

Query: 122 PFNPRFTQPLQKAKEMIEKGEIGKLEYIYTI--SEYVKPPMFLEGIDTSWFFDIKKSGGG 179
                F  P  + +E+I  GE G ++ I  +  ++Y++ P   E + T+        GGG
Sbjct: 129 GHCHSFDTPYLRTRELIGSGEFGAVKMIQALNYTDYLQRPRRPEELSTA-------EGGG 181

Query: 180 GFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLT 235
                A H +D +  L  S   RV A +G        +   TA + F+NG  A +T
Sbjct: 182 AVFSQAAHQVDVVRLLAGSRATRVRAAVGNWDPARPTEGAYTATLWFENGAFASIT 237


>dbj|BAB04429.1| (AP001509) unknown conserved protein [Bacillus halodurans]
           Length = 388
           
 Score = 87.8 bits (214), Expect = 2e-16
 Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 15/203 (7%)

Query: 2   VRFGVISY-----AHPHALRYAATIRANR-RAKLVAISGDGANSGLAKIEAKKYGAKFYQ 55
           ++ G+I Y     AH HA R       +  R ++  I G     G+A+  A +YG + Y 
Sbjct: 4   IKVGMIGYKFMGKAHSHAYRDLPMFFPDHLRPEMKVICGRNPE-GVAQA-ASQYGWEEYT 61

Query: 56  -DYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARK 114
            +++ L+R + ++ + I   +  HKE+ + AA+ GK I  EKP+ALTL+D + +++A   
Sbjct: 62  TNWKDLIRRDDIDLIDINAPSDVHKEITLAAAQAGKHIFCEKPLALTLQDSRHMLEAVEA 121

Query: 115 AGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYI--YTISEYVKPPMFLEGIDTSWFFD 172
           AGVK MV FN RFT  +  AK++I +G +G + +   + + +++  P F       W   
Sbjct: 122 AGVKHMVGFNYRFTPAVLLAKKLIAEGRLGDIYHFRAWFLQDWIVAPDF----PLVWRLQ 177

Query: 173 IKKSGGGGFMDTAPHGIDSLFWL 195
              +G G   D   H ID   +L
Sbjct: 178 KDIAGSGAHGDLGAHLIDMAHFL 200


>pir||A83617 probable oxidoreductase PA0237 [imported] - Pseudomonas aeruginosa
           (strain PAO1) >gi|9946075|gb|AAG03626.1|AE004461_9
           (AE004461) probable oxidoreductase [Pseudomonas
           aeruginosa]
           Length = 347
           
 Score = 85.8 bits (209), Expect = 6e-16
 Identities = 78/307 (25%), Positives = 136/307 (43%), Gaps = 38/307 (12%)

Query: 50  GAKFYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIV 109
           G  ++ D+ +LL +   +A  +A     H   A+     G  +LLEKP+ + L++  E+V
Sbjct: 47  GVPWFGDHRRLLEEARPQAAIVANPNNLHVATALDCLAAGVPLLLEKPVGVQLDEVSELV 106

Query: 110 KAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSW 169
             AR++GV L+V  + R    + +A+++I +G +G+L  +  + +  KP  + E    +W
Sbjct: 107 AVARRSGVPLLVGHHRRHNPLVVRARQLIAEGALGRLLSVTALWQLKKPDSYFE---VAW 163

Query: 170 FFDIKKSGGGGFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNG 229
               ++ G G  +    H +D L  L   E   V A  G  I G   +D    L+ F NG
Sbjct: 164 ---RREPGAGMLLTNLIHDLDLLRHLC-GEVREVQALAGNAIRGLPNEDNIALLLRFANG 219

Query: 230 VIAVLT------AGWA-------NPKGYPYGLEIK-YYIVGDDGFLDIRSAYPDFTVYQD 275
            +  LT      A W+       NP  YP   E   Y + G +G L +    P    ++ 
Sbjct: 220 ALGSLTGCDAAAAPWSWELAAGENPV-YPRQAEQPCYLLAGTEGALSL----PQLRRWRY 274

Query: 276 KTEKIFWE---RADVEGIVNA---------FIDAIQQDKEPPITGEDALKNLAVVLAAYE 323
              +  W     A  E +            F+   + ++ P +   DA + LA+V A  E
Sbjct: 275 AEARQGWHDPLAASEEAVATGDPLQRQLEHFVRVARGEEAPLMDATDAARTLALVEAVRE 334

Query: 324 SSKTGKA 330
           ++++G+A
Sbjct: 335 AARSGRA 341


>sp|P49305|YMO1_RHIME HYPOTHETICAL 36.4 KD PROTEIN IN MOCC-MOCA INTERGENIC REGION
           (ORF334) >gi|1073149|pir||S51570 hypothetical protein
           334 - Rhizobium meliloti >gi|468760|emb|CAA55267.1|
           (X78503) ORF334 [Sinorhizobium meliloti]
           Length = 334
           
 Score = 85.0 bits (207), Expect = 1e-15
 Identities = 65/237 (27%), Positives = 114/237 (47%), Gaps = 15/237 (6%)

Query: 1   MVRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYG-AKFYQDYEK 59
           +VRFG+I  A     +   ++ +    ++VAI+    +   A+  A ++G  + Y  Y++
Sbjct: 3   LVRFGIIGTAAIAVEKVIPSMLSAEGLEVVAIASRDLDR--ARAAATRFGIGRSYGSYDE 60

Query: 60  LLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKL 119
           +L D  +EAVYI +  + H   AIRAAE GK +L EKP+AL +E+   ++    + G ++
Sbjct: 61  ILADPEIEAVYIPLPNHLHVHWAIRAAEAGKHVLCEKPLALDVEELSRLIDCRDRTGRRI 120

Query: 120 MVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGG 179
                 R      +  +++  GEIG++  I  +   V        +D     +    GGG
Sbjct: 121 QEAVMIRAHPQWDEIFDIVASGEIGEVRAIQGVFTEV-------NLDPKSIVNDASIGGG 173

Query: 180 GFMDTAPHGIDSLFWLTESEPIRVYA--DIGPKIWGFQVDDIGTALIEFKNGVIAVL 234
              D   + I +   +  +EP RV+A  D+ P    F +D + +A++ F  G  A L
Sbjct: 174 ALYDLGVYPIAAARMVFAAEPERVFAVSDLDPV---FGIDRLTSAVLLFPGGRQATL 227


>gb|AAD03557.1| (AF095748) phthalate dihydrodiol dehydrogenase [Burkholderia
           cepacia]
           Length = 391
           
 Score = 84.3 bits (205), Expect = 2e-15
 Identities = 68/236 (28%), Positives = 108/236 (44%), Gaps = 12/236 (5%)

Query: 2   VRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLL 61
           +R GV       +L     +R + R +LVA   D  +    +  A  + A  Y D  +L 
Sbjct: 6   LRIGVAGLGRAFSLMLPTFLR-DSRVQLVAAC-DPRDEARRQFAAD-FAAPTYADVAELA 62

Query: 62  RDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMV 121
            D +VE +Y+A     H +    AA +GK +L+EKP+AL   D   ++ A R A V L+V
Sbjct: 63  NDPNVEIIYVASPHQFHAQHTEIAAAKGKHVLVEKPMALAAADCDRMIAACRAANVHLIV 122

Query: 122 PFNPRFTQPLQKAKEMIEKGEIGKLEYIYTI--SEYVKPPMFLEGIDTSWFFDIKKSGGG 179
                F  P  + +E+I  G+ G ++ I  +  ++Y+  P   E + T+        GGG
Sbjct: 123 GHCHSFDTPYLRTRELISLGDFGAVKMIQAVNYTDYLYRPRRPEELATA-------EGGG 175

Query: 180 GFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLT 235
                A H +D +  L  S   R+ A +G        +   +ALI F+NG  A L+
Sbjct: 176 AVFSQAAHQVDIVRMLAGSRATRLRASVGRWDPSRPTEGAYSALIWFENGAYASLS 231


>dbj|BAB05940.1| (AP001514) unknown conserved protein [Bacillus halodurans]
           Length = 345
           
 Score = 83.9 bits (204), Expect = 2e-15
 Identities = 80/291 (27%), Positives = 130/291 (44%), Gaps = 29/291 (9%)

Query: 58  EKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGV 117
           ++L  +  ++A++I   T  H      AA  GK I  EKPI+  + + K  +    +AGV
Sbjct: 58  DELFSNRDIDAIFICSSTDTHAAFIKAAALAGKHIFCEKPISFHVTETKGALNIVNEAGV 117

Query: 118 KLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSG 177
           K  V FN R+ +  ++ +E ++ G IG    I   S   + P  L  ++ S         
Sbjct: 118 KFQVGFNRRYDKHFRRVQECVQAGAIGAPHIIRVSSRDPEAPP-LSYVERS--------- 167

Query: 178 GGGFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWG--FQVDDIGTALIE--FKNGVIAV 233
           GG FMD   H  D + +L+ SE   V       +     +V D+ TA+I    +NG IAV
Sbjct: 168 GGMFMDMTIHDFDMVRYLSGSEVTEVSVKAANLVDSRIGEVGDVDTAIITLMLENGAIAV 227

Query: 234 LTAGWANPKGYPYGLEIKYYIVGDDGFL--------DIRSAYPDFTVYQDKTEKIFWERA 285
           +     N +   YG + +  + G  G +        +++ +  D TV  D  +  F +R 
Sbjct: 228 ID----NSRQAAYGYDQRVEVFGSLGSVSADNERKTNVQISTKD-TVTLDLPKHFFLDRY 282

Query: 286 D--VEGIVNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGKAVKVE 334
           +   +  V  F  AI +D+    TGED  K   + LAA +S    + V V+
Sbjct: 283 EQAYKDEVAEFATAILEDQPLRCTGEDGYKAELLALAAKQSWLENRPVAVK 333


>gb|AAC31183.1| (AF076240) putative NADH-inositol dehydrogenase MocA [Rhizobium
           leguminosarum bv. viciae]
           Length = 306
           
 Score = 82.7 bits (201), Expect = 6e-15
 Identities = 70/306 (22%), Positives = 125/306 (39%), Gaps = 25/306 (8%)

Query: 21  IRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLLRDESVEAVYIAIETYRHKE 80
           +RA   + LV ++         ++  ++ G K Y+  ++++    ++ V IA  +  H E
Sbjct: 19  LRAASESLLVEVTAVVEPVAATRLALERSGIKTYKTADEMIDAGEIDGVLIATPSKTHVE 78

Query: 81  VAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEK 140
                A  G  IL EKP  +T E+ ++  +AA +  V L + +  RF   L+K ++ I  
Sbjct: 79  NITNIAARGLPILCEKPCGVTAEEARKAAEAAEQFKVHLQIGYWRRFVPELEKLRQNIRS 138

Query: 141 GEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLTESEP 200
           G +G+   I        PP              + +GGG  +D   H  D + WLT  EP
Sbjct: 139 GLLGEPYLISCFQWDETPPA----------ASFRATGGGALIDMGVHEFDQMRWLTGQEP 188

Query: 201 IRVYADIGPKIWGFQVD---DIGTALIEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGD 257
                      +  +V+   D    L +   G + +++ G    + +P G      + G 
Sbjct: 189 SNFRVAASKTTFAGKVEGDPDAVQLLCDLSGGGVGLVSLG----RRFPPGDACWAQVFGT 244

Query: 258 DGFLDIRSAYPDFTVYQDKTEKIFWERADVEGIVNAFIDAIQQDKEPPITGEDALKNLAV 317
            GF ++R  +P         E +F     +   +  F+ A +       T +DA+  LA+
Sbjct: 245 SGFEEVRFFWP------PNGEAVFLNA--LRSQLEDFVQAARGGASQGATAQDAVTALAI 296

Query: 318 VLAAYE 323
             AA E
Sbjct: 297 AEAATE 302


>dbj|BAB05939.1| (AP001514) dehydrogenase [Bacillus halodurans]
           Length = 345
           
 Score = 81.5 bits (198), Expect = 1e-14
 Identities = 77/309 (24%), Positives = 131/309 (41%), Gaps = 36/309 (11%)

Query: 47  KKYGAKF-YQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDG 105
           +++G  + Y  YE++L +E ++A++IA  +  H E   +  E+G  +  EKP+ L L + 
Sbjct: 47  ERWGVPYGYTSYEEMLANEELDAIFIASPSGFHCEQIKKGLEKGFHVFCEKPLGLHLAEV 106

Query: 106 KEIVKAA-RKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEG 164
           +E+  A  R      M+ F  R+    Q AKE I +GEIG+   I     Y   P     
Sbjct: 107 REVENAVNRHKDQVFMLGFMRRYDPSYQAAKEKINRGEIGEPVLIRC---YGLDP--ASQ 161

Query: 165 IDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLTESEPIRVYADIG----PKIWGFQVDDIG 220
           ID    F      GG F+D + H  D   W   +E   V+A  G    P+       + G
Sbjct: 162 IDGFLAFAKANDSGGLFLDMSIHDFDLARWYLGAEASEVWAIGGSYSRPEFAELGDAETG 221

Query: 221 TALIEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGDDGFLDIRSAYPDFTVYQDKTEKI 280
            A++ F N  I +  AG    +   +G  I+  I+G  G + I S      + +     +
Sbjct: 222 AAMVRFDNQAIGLFVAG----RNCAHGYHIETEIIGTKGTIRIGS------IPERNQAVV 271

Query: 281 FWERADVEGIVNAFIDAIQQ---------------DKEPPITGEDALKNLAVVLAAYESS 325
             E   +   V  FI+  +Q                ++P +T +D +++  +  A  +S 
Sbjct: 272 MNEHGVIHECVQGFIERFEQAYRAEAEEFIRCILEGRKPDVTVKDGVESTKLGYACKQSF 331

Query: 326 KTGKAVKVE 334
            T   + V+
Sbjct: 332 TTKTLINVQ 340


>emb|CAC11395.1| (AL445063) glucose-fructose oxidoreductase related protein
           [Thermoplasma acidophilum]
           Length = 322
           
 Score = 80.8 bits (196), Expect = 2e-14
 Identities = 77/290 (26%), Positives = 131/290 (44%), Gaps = 32/290 (11%)

Query: 52  KFYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKA 111
           K Y +YE  LR  S   V + +    H E+   A +  K +L+EKPI   ++ G  +++ 
Sbjct: 47  KVYDNYEDALRSGS-NIVDLVVPDGLHYEMGSLALKSKKHLLVEKPITPDIDSGISLIQQ 105

Query: 112 ARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFF 171
           A ++ +KLMV     F   + +A   I  GEIGK   +    +  +    L+G    W  
Sbjct: 106 AEESKLKLMVAEQFYFDPSVNEAIRRINNGEIGKPHTVIVRHQSFRE---LKG----WRN 158

Query: 172 DIKKSGGGGFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVI 231
           +    G G  +D   H ID+L  L      R       + W F  +D   A+  F+NG+ 
Sbjct: 159 EKSMMGRGILIDEGTHYIDTL--LNFGGRYRSLRSFVHRTWDFLGEDTAEAVFNFENGMH 216

Query: 232 AVLTAGWANPKGYPYGLEIKYYIVGDDG--FLDI-------------RSAYPDFTVYQDK 276
            +    W  P+   Y L  ++ I+GD G  + DI             ++AY D  V    
Sbjct: 217 GLFFYSWNYPE---YPLLPEFEIIGDAGSIYEDIGTKPTEPWDQRKRKTAYGDIIV---N 270

Query: 277 TEKIFWERADV-EGIVNAFIDAIQQDKEPPITGEDALKNLAVVLAAYESS 325
            + I  E  DV E  ++ F++A+++D+  P+  + AL+++  +   Y++S
Sbjct: 271 GKHIPVEPYDVIEREISGFLNAVEKDEPVPMPPDLALRDIITIDRIYKAS 320


>sp|O68965|MI2D_RHIME MYO-INOSITOL 2-DEHYDROGENASE >gi|3088561|gb|AAC70005.1| (AF059313)
           myo-inositol dehydrogenase [Sinorhizobium meliloti]
           Length = 330
           
 Score = 80.0 bits (194), Expect = 4e-14
 Identities = 91/346 (26%), Positives = 142/346 (40%), Gaps = 33/346 (9%)

Query: 2   VRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLL 61
           VRFG++       + +A  +  N  A+LVA++   A    A+  A  YG +  +  + + 
Sbjct: 3   VRFGLLGAGRIGKV-HAKAVSGNADARLVAVAD--AFPAAAEAIAGAYGCEV-RTIDAIE 58

Query: 62  RDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMV 121
               ++AV I   T  H ++  R A  GK I  EKPI L  E  +  +K       KLMV
Sbjct: 59  AAADIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMV 118

Query: 122 PFNPRFTQPLQKAKEMIEKGEIGKLEYI-YTISEYVKPPMFLEGIDTSWFFDIKKSGGGG 180
            FN RF       ++ I+ G IG++E +  T  +   PP+           D  K  GG 
Sbjct: 119 GFNRRFDPHFMAVRKAIDDGRIGEVEMVTITSRDPSAPPV-----------DYIKRSGGI 167

Query: 181 FMDTAPHGIDSLFWLTESEPIRVYADIG---PKIWGFQVD-DIGTALIEFKNGVIAVLTA 236
           F D   H  D   +L   EP+ V A       K  G   D D  + +++  +G  A++  
Sbjct: 168 FRDMTIHDFDMARFLLGEEPVSVTATAAVLIDKAIGDAGDYDSVSVILQTASGKQAII-- 225

Query: 237 GWANPKGYPYGLEIKYYIVGDDGFLDIRSAYP------DFTVYQDKTEKIFWERADVEGI 290
             AN +   YG + +  + G  G +   +  P          Y       F+     E  
Sbjct: 226 --ANSRRATYGYDQRIEVHGSKGAVAAENQRPVSIEIATGDGYTRPPLHDFFMTRYTEAY 283

Query: 291 VN---AFIDAIQQDKEPPITGEDALKNLAVVLAAYESSKTGKAVKV 333
            N   +FI AI++  E   +G D L  LA+  AA  S    + + +
Sbjct: 284 ANEIESFIAAIEKGAEIAPSGNDGLAALALADAAVRSVAEKRQISI 329


>emb|CAB88965.1| (AL353864) putative oxidoreductase. [Streptomyces coelicolor A3(2)]
           Length = 387
           
 Score = 79.2 bits (192), Expect = 6e-14
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 7/154 (4%)

Query: 40  GLAKIEAKKYG-AKFYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPI 98
           G A+  A ++G A   +D+ ++  D  V AV I    + H+E+A+  A  GK I +EKP+
Sbjct: 48  GRAEEAAAQFGFASTTRDWREVAADPRVHAVSITAPNFLHREIAVAMAGAGKHIWVEKPV 107

Query: 99  ALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEY--IYTISEYV 156
            L+ +D + +  A   AGV+  V FN R    ++ A+ +I  GEIG + +  +   S+Y 
Sbjct: 108 GLSSDDARAVADAVSGAGVQGAVGFNYRNAPAVETARRLIAAGEIGTVTHARLRFFSDYA 167

Query: 157 KPPMFLEGIDTSWFFDIKKSGGGGFMDTAPHGID 190
             P   EG  T W ++ ++ G G   D A HG D
Sbjct: 168 AHP---EGALT-WRYERERGGSGVLGDLASHGAD 197


>sp|Q54728|YJHC_STRPN HYPOTHETICAL PROTEIN IN NANB 3'REGION (ORF-5)
           >gi|1163116|gb|AAC44397.1| (U43526) ORF-5 [Streptococcus
           pneumoniae]
           Length = 347
           
 Score = 78.0 bits (189), Expect = 1e-13
 Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 17/253 (6%)

Query: 1   MVRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKL 60
           MV++GV+   +  A   A  ++ N  A++  +  D  N   A+  A++ GAK     ++L
Sbjct: 1   MVKYGVVGAGYFGA-ELARYMQKNDGAEITLLY-DPDN---AEAIAEELGAKVASSLDEL 55

Query: 61  LRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM 120
           +  + V+ V +A     HKE  I+AA+ GK++  EKPIAL+ +D +E+V A ++  V  M
Sbjct: 56  VSSDEVDCVIVATPNNLHKEPVIKAAQHGKNVFCEKPIALSYQDCREMVDACKENNVTFM 115

Query: 121 VPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGG 180
                 F   +  AKE+I +G IG + Y +T     +     + +  SW    +KSGG  
Sbjct: 116 AGHIMNFFNGVHHAKELINQGVIGDVLYCHTARNGWEE----QQLSVSWKKIREKSGGHL 171

Query: 181 FMDTAPHGIDSLFWLTESEPIRVYADIG-----PKIWGFQVDDIGTALIEFKNGVIAVLT 235
           +     H +D + +L    P  V    G      + +G + DD+    +EF N   A+L 
Sbjct: 172 YHHI--HELDCVQFLMGGMPETVTMTGGNVAHEGEHFGDE-DDMIFVNMEFSNKRFALLE 228

Query: 236 AGWANPKGYPYGL 248
            G A   G  Y L
Sbjct: 229 WGSAYRWGEHYVL 241


>gb|AAC31181.1| (AF076240) unknown [Rhizobium leguminosarum bv. viciae]
           Length = 334
           
 Score = 77.3 bits (187), Expect = 2e-13
 Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 13/235 (5%)

Query: 2   VRFGVISYAHPHALRYAATIRANRRAK-LVAISGDGANSGLAKIEAKKYGAK-FYQDYEK 59
           VR+G+I  A   A+     I A  RA+ L  ++    ++  A+  A + G K  Y  Y+ 
Sbjct: 4   VRWGIIGTA---AIALEKVIPAMSRAEGLEVVAFASRDADKAQAAASRLGLKRSYGSYDA 60

Query: 60  LLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKL 119
           +L D  +EAVYI +  + H E AIRAAE GKD+L EKP+AL + +   ++    + G  +
Sbjct: 61  ILADPDIEAVYIPLPNHLHVEWAIRAAEAGKDVLCEKPLALDVRELNRLIDCRDRTGRLI 120

Query: 120 MVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGG 179
                 +  +   +   ++  GEIG++  +  +   +        +D     +    GGG
Sbjct: 121 QEAVMIQAHRQWDETLGIVASGEIGEVRAVTGVFTEI-------NLDPKSIVNNAAIGGG 173

Query: 180 GFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVL 234
              D   + I +   +  +EP RV+A +      F VD + +A++ F     A L
Sbjct: 174 ALYDLGVYPIAAARLVFGAEPERVFA-VSAFDPDFGVDRLTSAILSFPRARQATL 227


>emb|CAC12307.1| (AL445066) glucose-fructose oxidoreductase related protein
           [Thermoplasma acidophilum]
           Length = 321
           
 Score = 76.1 bits (184), Expect = 5e-13
 Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 37/267 (13%)

Query: 78  HKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEM 137
           H +V +++   GK +++EKPIA  + D +E+++ A +   K MV     F   + KAKE+
Sbjct: 72  HHDVTVKSLAMGKHVMVEKPIATDISDAREMIRTAVQNRRKFMVADQYYFDPSVWKAKEI 131

Query: 138 IEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLTE 197
           ++ G+IG    ++TI    +      G    W       GGG  +D   H ID++  L  
Sbjct: 132 MDSGKIGS---VHTIIIRDQRKYNWHG----WRSQASIMGGGPLIDGGIHFIDTMLNLA- 183

Query: 198 SEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGWANPKGYPYGLEI-KYYIVG 256
            E I V ++    +   +  D   A+ +FK+G   +    W    GYPY   +  + I+G
Sbjct: 184 GEYISVRSNFYRSVASIEEPDTVEAIFKFKDGSNGLFFYSW----GYPYPPSLPSFEIIG 239

Query: 257 DDGFL--DIRSAYPDFTVYQDK----------------TEKIFWERADVEGIVNAFIDAI 298
            DG +  D+RS   +F   + K                   IF + A      + F+ ++
Sbjct: 240 TDGSILEDLRSKPSNFEAPKGKRAYGDPLLNGDLIDLGPHDIFVDEA------SGFLKSV 293

Query: 299 QQDKEPPITGEDALKNLAVVLAAYESS 325
             D   P   E AL++L  V   Y +S
Sbjct: 294 VDDTPVPFDPELALRDLRAVKDIYANS 320


>sp|P49307|MOCA_RHIME RHIZOPINE CATABOLISM PROTEIN MOCA >gi|2120810|pir||S51572 mocA
           protein - Rhizobium meliloti >gi|468762|emb|CAA55269.1|
           (X78503) mocA [Sinorhizobium meliloti]
           Length = 317
           
 Score = 75.7 bits (183), Expect = 7e-13
 Identities = 69/306 (22%), Positives = 116/306 (37%), Gaps = 25/306 (8%)

Query: 21  IRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLLRDESVEAVYIAIETYRHKE 80
           +RA   + LV I+        +++     G K Y+    ++    V+ V IA  +  H +
Sbjct: 19  VRAAAESSLVEIAAVADPIAASRLNLAGNGIKTYETAGDMIEAGEVDGVLIATPSNTHVD 78

Query: 81  VAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEK 140
                A  G  IL EKP  +T E+ ++    A +  V L + +  RF   L++ ++ I  
Sbjct: 79  TVADIAARGLPILCEKPCGVTAEEARKAADVAERYKVHLQIGYWRRFVPELKQLRDDIRA 138

Query: 141 GEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLTESEP 200
           G +G L  +        PP              + +GGG F+D   H  D + WLT  EP
Sbjct: 139 GLLGNLYLVSCFQWDEAPPA----------NSFRATGGGAFIDMGVHEFDQMRWLTGQEP 188

Query: 201 IRVYADIGPKIWGFQV---DDIGTALIEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGD 257
                      +   V    D    L +  +G   +++ G    + +P G      + G 
Sbjct: 189 TNFRVATSKTTFAGAVKGDPDAVQLLCDLSDGSSGLVSLG----RRFPPGDACWTQVFGT 244

Query: 258 DGFLDIRSAYPDFTVYQDKTEKIFWERADVEGIVNAFIDAIQQDKEPPITGEDALKNLAV 317
            GF + R  +P         E +F      +  +  F+ A +       T  DA+  L +
Sbjct: 245 SGFAEARFFWP------PDGEAVFLNALQAQ--LEDFVQAARGGAPRGATASDAVAALTI 296

Query: 318 VLAAYE 323
             AA E
Sbjct: 297 AEAATE 302


>emb|CAB96550.1| (AJ007932) D-oliose 4-ketoreductase [Streptomyces argillaceus]
           Length = 328
           
 Score = 74.1 bits (179), Expect = 2e-12
 Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 27/242 (11%)

Query: 38  NSGLAKIEAKKYGAKFYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKP 97
           ++G AK+ A ++G +    YE+LL  + ++AVY+ +    H     RA E G  +L+EKP
Sbjct: 42  DAGRAKLFAGEFGGEPVAGYEELLARDDLDAVYVPLPAALHAPWTGRALEAGLHVLVEKP 101

Query: 98  IALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVK 157
            A T  +   + +AAR+ G+ +M  F        + A+ ++++G IG+L  +   +E+  
Sbjct: 102 AAATAAEADRLTRAARERGLVVMENFGFVHHAQQEAARSLLDEGAIGELRSL--TAEFAF 159

Query: 158 PPMFLEGIDTSWFFDIKKS---GGGGFMDTAPHGIDS--LFWLTESEPIRVYADIGPKIW 212
           PP+     DT    DI+     GGG  +D   + I +  LF   E E         P   
Sbjct: 160 PPL----PDT----DIRYQPGLGGGALLDAGVYPIRTARLFLGDELEVTGASLREDP--- 208

Query: 213 GFQVDDIGTALIEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGDDGFLDIRSAY---PD 269
           G  VD  G AL+    G+ A L  G+ +   Y  G    Y + G  G + +  AY    D
Sbjct: 209 GRGVDVAGAALLTGPTGISAHLGFGFVH--SYRCG----YTLWGSAGRIGLNRAYSARDD 262

Query: 270 FT 271
           FT
Sbjct: 263 FT 264


>gb|AAG09709.1|AF218837_4 (AF218837) unknown [Pasteurella multocida]
           Length = 367
           
 Score = 73.4 bits (177), Expect = 4e-12
 Identities = 73/253 (28%), Positives = 113/253 (43%), Gaps = 17/253 (6%)

Query: 1   MVRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKL 60
           M+++GV+   +  A   A  +  N  AK+  +        +AK E +   A      ++L
Sbjct: 1   MMKYGVVGVGYFGA-DLARFMNENENAKVTMVYDPENGETIAK-ELQCIAAT---SLKQL 55

Query: 61  LRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM 120
           +    V+ V +A   Y HKE  I AA+ GK +  EKPIAL  +D  E+V+   + GV  M
Sbjct: 56  VSSPEVDCVIVATPNYLHKEPVIEAAKHGKHVFCEKPIALNYQDCDEMVRTCEENGVIFM 115

Query: 121 VPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGG 180
                 F   +  AKE+I++G IGK+ Y ++     +     E    SW     KSGG  
Sbjct: 116 AGHVMNFFNGVHHAKELIKQGVIGKVLYCHSARNGWED----EQSSISWKKIRAKSGGHL 171

Query: 181 FMDTAPHGIDSLFWLTESEPIRVYADIG-----PKIWGFQVDDIGTALIEFKNGVIAVLT 235
           +     H +D + ++    P  V    G      + +G + DD+    +EF+ G  AVL 
Sbjct: 172 YHHI--HELDCIQFIMGGMPKTVTMTAGNVAHQSEKFGDE-DDMLFLNLEFEGGRFAVLE 228

Query: 236 AGWANPKGYPYGL 248
            G A   G  Y L
Sbjct: 229 WGSAFRWGEHYVL 241


>pir||S76068 hypothetical protein - Synechocystis sp. (strain PCC 6803)
           >gi|1001423|dbj|BAA10046.1| (D63999) hypothetical
           protein [Synechocystis sp.]
           Length = 364
           
 Score = 72.6 bits (175), Expect = 6e-12
 Identities = 66/239 (27%), Positives = 103/239 (42%), Gaps = 31/239 (12%)

Query: 2   VRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLL 61
           +R GVI   +     +   +   +  + V I+      GL    A KY   F++DY+++L
Sbjct: 24  IRIGVIGVGNM-GQHHTRVLSLMKDVEFVGIADVNVERGLDT--ASKYRVHFFEDYQEML 80

Query: 62  RDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMV 121
               V+AV +A+ T  H +V +   +     L+EKPIA ++ + + +V AA  A   L V
Sbjct: 81  --PHVDAVCVAVPTRLHHDVGMNCLQNNVHTLIEKPIAASIAEAESLVNAAADANCILQV 138

Query: 122 ----PFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSG 177
                FNP F          +E  +I K E +  I  +   P      D S   D+    
Sbjct: 139 GHIERFNPAF----------LELTKILKTEELLAIEAHRMSPYSQRANDVSVVLDL---- 184

Query: 178 GGGFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTA 236
                    H ID L  L  SE +++ A  G +  G    D  TA + F +G++A LTA
Sbjct: 185 -------MIHDIDLLLELVGSEVVKLSAS-GSRASGSGYLDYVTATLGFSSGIVATLTA 235


>sp|P74041|Y816_SYNY3 HYPOTHETICAL 41.5 KD PROTEIN SLL0816 >gi|7469938|pir||S75555
           hypothetical protein sll0816 - Synechocystis sp. (strain
           PCC 6803) >gi|1653200|dbj|BAA18116.1| (D90911)
           hypothetical protein [Synechocystis sp.]
           Length = 371
           
 Score = 71.0 bits (171), Expect = 2e-11
 Identities = 46/146 (31%), Positives = 76/146 (51%), Gaps = 11/146 (7%)

Query: 54  YQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAAR 113
           Y + E+LL +  V+AV IA   + H E+A +A   GK +LLEKP+ L +E+  E+   AR
Sbjct: 57  YNNLEELLANPEVQAVTIASPPFLHYEMAKQAILAGKHVLLEKPMTLRVEETIELYHLAR 116

Query: 114 KAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYI---YTISEYVKPPMFLEGIDTSW- 169
           +  V+++  F  RF    Q   E++ +G +G+L+ I   + +     P       + +W 
Sbjct: 117 QREVQVIPDFEFRFVPAWQYVAELLGQGILGQLKLIKVDWLVGSRANP-------NRAWN 169

Query: 170 FFDIKKSGGGGFMDTAPHGIDSLFWL 195
           ++  ++ GGG     A H  D L WL
Sbjct: 170 WYAQREKGGGALGALASHTFDYLHWL 195


>emb|CAC11912.1| (AL445065) hypothetical protein [Thermoplasma acidophilum]
           Length = 322
           
 Score = 70.6 bits (170), Expect = 2e-11
 Identities = 71/297 (23%), Positives = 128/297 (42%), Gaps = 25/297 (8%)

Query: 38  NSGLAKIEAKKYGAK-FYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEK 96
           N  + ++  + YG +  Y D    L D   +AV I +    H EVA++A E+GK +L+EK
Sbjct: 37  NPQVLEMYRRDYGVRETYSDMAAAL-DADNDAVDIVLPHNLHYEVAMKAIEKGKHVLVEK 95

Query: 97  PIALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISE-- 154
           P+   +++  +I+  A+K  +K MV     F    +KA E+++ G+IG +  +    +  
Sbjct: 96  PVTGRIDEAVKIINQAKKKRLKFMVAEQFYFDPSFRKALEIVQSGKIGDVRTVIVRDQQR 155

Query: 155 YVKPPMFLEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGF 214
           Y  P          W     +  GG  +D   H ++ +F     +   + A         
Sbjct: 156 YDAP---------GWRSRKNEMMGGSLIDGGVHFLE-IFLDFGGQWKSISAHNYKGGTSI 205

Query: 215 QVDDIGTALIEFKNGVIAVLTAGWA--NPKGYP----YGLEIKYYIVGDDGFL---DIRS 265
           + +D   AL  F+N V  +    W+   P   P     G E   Y + +   +   ++R+
Sbjct: 206 EGEDNTAALFTFENDVHGIFYYSWSYVEPPKLPAFEVIGTEGSVYEMKESSLMKPDNVRT 265

Query: 266 AYPDFTVYQDKTEKIFWERADVEGIVNAFIDAIQQDKEPPITGEDALKNLAVVLAAY 322
              +  V       + W+    E  +  F+ +I++D E P    +A++NL  VL  Y
Sbjct: 266 VL-NQPVLNGNIVSVEWKDV-YESEIGGFLKSIEKDTEVPYPPANAIRNLETVLMMY 320


>sp|P55480|Y4HM_RHISN HYPOTHETICAL PROTEIN Y4HM PRECURSOR >gi|7465612|pir||T10847 y4hM
           protein - Rhizobium sp. (strain NGR234) plasmid pNGR234a
           >gi|2182432|gb|AAB92451.1| (AE000077) Y4hM [Rhizobium
           sp. NGR234]
           Length = 403
           
 Score = 70.2 bits (169), Expect = 3e-11
 Identities = 67/271 (24%), Positives = 114/271 (41%), Gaps = 14/271 (5%)

Query: 31  AISGDGANSGLAKIEAKKYGAKFYQDYEKLL-----RDESVEAVYIAIETYRHKEVAIRA 85
           A+S D  N+  +  E      + Y D+  +      RD+ +EAV I    + H  +A   
Sbjct: 51  ALSSDPENAHASAAEWMIAPDRSYSDWNAMATAEAARDDGIEAVSIVTPNWTHHRIATAF 110

Query: 86  AEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEMIEKGEIGK 145
            + G D++L+KP+  T+ D +E+V+  R     +++ +       +++AK MI  G +G 
Sbjct: 111 LKAGIDVILDKPMTTTVSDARELVELQRATDRLVIMTYPYAHHAMVRQAKHMIRNGAVGT 170

Query: 146 LE--YIYTISEYVKPPMFLEGIDTSWFFDIKKSG-GGGFMDTAPHGIDSLFWLTESEPIR 202
           +   ++  + E+   P   +     W  D +K G      D   H    L  LT  +  R
Sbjct: 171 VRQAHVEYVQEWATAPFSSDAKGAMWRQDPEKVGRASATGDIGTHAYHLLHTLTGQDIAR 230

Query: 203 VYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGDDGFLD 262
           + A+         ++D        +NG   +L    A P  Y  GL I+ +  GD G L+
Sbjct: 231 LRAEFHTCGAVKAMEDTAYVTFRLENGAPGILWVTQAAPGQY-CGLRIRVW--GDRGGLE 287

Query: 263 IRSAYPDFTVY--QDKTEKIFWERADVEGIV 291
                P+   Y    + E+IF  R    GIV
Sbjct: 288 WDQEKPEALRYVPLGEQEQIF-VRGHGSGIV 317


>gb|AAD13550.1| (AF080235) oxidoreductase homolog [Streptomyces cyanogenus]
           Length = 321
           
 Score = 70.2 bits (169), Expect = 3e-11
 Identities = 75/292 (25%), Positives = 124/292 (41%), Gaps = 25/292 (8%)

Query: 2   VRFGVISYAHPHALRYAATIRANRRAKLVAI-SGDGANSGLAKIEAKKYGAKFYQDYEKL 60
           VR GV+  A     R    + A     + A+ S D A +G     A ++GA+    Y +L
Sbjct: 4   VRIGVLGCADIARRRMLPAMAAEPGITIAAVASRDSARAGEL---AGRFGARPVTGYAEL 60

Query: 61  LRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM 120
           L  + ++AVY+ +    H      A   GK +L EKP+  +L + + ++  A+++G+ LM
Sbjct: 61  LERDDIDAVYVPLPAALHARWTEAALRRGKHVLAEKPLTTSLAESRRLIALAQESGLALM 120

Query: 121 VPFNPRFTQPLQ--KAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGG 178
              N  F    Q    ++++  G IG+L   +      + P      D  +   + + GG
Sbjct: 121 E--NVMFIHHSQHDAVRKLVWDGVIGELRAFHAAFAIPRLP----DDDIRY---VPELGG 171

Query: 179 GGFMDTAPHGIDSLFWLTESEPIRVYADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGW 238
           G   DT  + + +       + ++V   +  +  G +VD  G+AL+    GV   LT   
Sbjct: 172 GALWDTGVYPVRAALHFL-GDNLQVLGAMLTQEPGRRVDTAGSALLRTPEGVGVQLTF-- 228

Query: 239 ANPKGYPYGLEIKYYIVGDDGFLDIRSAYPDFTVYQDKTEKIFWERADVEGI 290
               G  +G    Y I G  G + +  A   FT   D    I  ER  VE I
Sbjct: 229 ----GLDHGYRSAYEIWGSQGRITVERA---FTPPADHRPLIRVERRGVEEI 273


>sp|P26935|MI2D_BACSU MYO-INOSITOL 2-DEHYDROGENASE >gi|80338|pir||JH0511 myo-inositol
           2-dehydrogenase (EC 1.1.1.18) iolG - Bacillus subtilis
           >gi|143086|gb|AAA22543.1| (M76431) inositol
           dehydrogenase [Bacillus subtilis]
           >gi|709987|dbj|BAA03296.1| (D14399) myo-inositol
           dehydrogenase [Bacillus subtilis]
           >gi|2636516|emb|CAB16006.1| (Z99124) myo-inositol
           2-dehydrogenase [Bacillus subtilis]
           Length = 344
           
 Score = 69.9 bits (168), Expect = 4e-11
 Identities = 84/327 (25%), Positives = 143/327 (43%), Gaps = 43/327 (13%)

Query: 27  AKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKLLRDESVEAVYIAIETYRHKEVAIRAA 86
           A++VA++     +    +E  +  A  Y + + LL DE+V+AV +      H+   ++A 
Sbjct: 28  AEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHESSVLKAI 87

Query: 87  EEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM-VPFNPRFTQPLQKAKEMIEKGEIGK 145
           +  K +  EKP+A T E    IV+   K G +L+ V F  R+     + KE ++    G+
Sbjct: 88  KAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVNGE 147

Query: 146 LEYIYTISEYVKPPMFLEGIDTSWFFDIKKSGGGGFMDTAPHGIDSLFWLT--ESEPIRV 203
              I+      + P   +   T              +DT  H ID L WL   + E ++V
Sbjct: 148 PLMIHCAH---RNPTVGDNYTTDM----------AVVDTLVHEIDVLHWLVNDDYESVQV 194

Query: 204 YADIGPKIWGFQVDDIGTALIEFKNGVIAVLTAGWANPKGYPYGLEIKYYIVGDDGFLDI 263
                 K     + D    +IE K G++ +    + N K   YG +I+  IVG+DG + +
Sbjct: 195 IYPKKSKNALPHLKDPQIVVIETKGGIV-INAEIYVNCK---YGYDIQCEIVGEDGIIKL 250

Query: 264 RSAYPDFTVYQDKTEKIF-------WERA-----DVEGIVNAFIDAIQQDKEPPITGEDA 311
               P+ +    + E  F       W+R      DVE  +  FID+IQ  K+  ++G  A
Sbjct: 251 ----PEPSSISLRKEGRFSTDILMDWQRRFVAAYDVE--IQDFIDSIQ--KKGEVSGPTA 302

Query: 312 LKNLAVVL---AAYESSKTGKAVKVEL 335
                  +   A  ++ ++G+  KVEL
Sbjct: 303 WDGYIAAVTTDACVKAQESGQKEKVEL 329


>pir||A69834 conserved hypothetical protein yhjJ - Bacillus subtilis
           >gi|2226182|emb|CAA74472.1| (Y14081) hypothetical
           protein [Bacillus subtilis] >gi|2633389|emb|CAB12893.1|
           (Z99109) similar to hypothetical proteins [Bacillus
           subtilis]
           Length = 350
           
 Score = 69.5 bits (167), Expect = 5e-11
 Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 17/259 (6%)

Query: 1   MVRFGVISYAHPHALRYAATIRANRRAKLVAISGDGANSGLAKIEAKKYGAKFYQDYEKL 60
           M + G+I  A   A  +A  +   + A+LV +     N   A+   K +G K +++ ++L
Sbjct: 1   MKKIGIIG-AGGIARAHATALSTIKNAELVGVYD--INQQNAESFVKTFGGKSFENVDEL 57

Query: 61  LRDESVEAVYIAIETYRHKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLM 120
           +  ++ E + +A   + HKE A++A  + K +L EKP+A++LE+   +   A +  V+  
Sbjct: 58  I--DASEGLIVASPNFCHKEHALQALGKHKHVLCEKPMAISLEEASIMKDTAERLSVRAS 115

Query: 121 VPFNPRFTQPLQKAKEMIEKGEIGKLEYIYTISEYVKPPMFLEGIDTSWFFDI-KKSGGG 179
           + FN R+   +   K +I   E+G    I +I  + K    L     +W  D   K   G
Sbjct: 116 MGFNYRYLSYVNILKSLIINNELGN---ILSIKVHFKKNSALRRKKFTWRDDANSKKTSG 172

Query: 180 GFMDTAPHGIDSLFWLTES----EPIRVYADIGPKIWGFQ---VDDIGTALIEFKNGV-I 231
              D   H ID +++L ES    E +R   +   K    +   VDD      + +N V +
Sbjct: 173 SLGDLGIHLIDMVWYLFESDFITESVRAKMNTNVKTKEDKQVLVDDYAEIYGQLRNKVFV 232

Query: 232 AVLTAGWANPKGYPYGLEI 250
            ++T+  + P+   + +E+
Sbjct: 233 NIITSKCSVPEDCGFSIEV 251


>gb|AAD51832.1|AF175299_7 (AF175299) ThuB [Sinorhizobium meliloti]
           Length = 365
           
 Score = 68.7 bits (165), Expect = 9e-11
 Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 27/244 (11%)

Query: 78  HKEVAIRAAEEGKDILLEKPIALTLEDGKEIVKAARKAGVKLMVPFNPRFTQPLQKAKEM 137
           H    +     GK +L EKP+A   E   E+  AA +AG+  MV    R   PLQKA+E+
Sbjct: 80  HHPTTLALIAAGKHVLCEKPLAENYEKAAEMAAAAERAGLVTMVNLTYRNVAPLQKAREL 139

Query: 138 IEKGEIGK---LEYIYTISEYVKPPMFLEGIDTSWFFDIK-KSGGGGFM-DTAPHGIDSL 192
           +  GEIG+   LE  Y  S  V         ++ W + +  K G  G + D   H +D  
Sbjct: 140 VVAGEIGRVRHLEASYLQSWLVSRAWGDWASESKWLWRLSTKHGSNGVLGDVGIHILDFA 199

Query: 193 FWLTESEPIRVYA-----DIGP--KIWGFQVD--DIGTALIEFKNGVIAVLTAG-WANPK 242
            +   S   RV+A     D  P  +I  + +D  D      EF+NG +AV+ A  WA   
Sbjct: 200 GYGANSSVERVFARLKAFDKAPDNRIGEYDLDANDSFAMTAEFENGAMAVIHASRWAT-- 257

Query: 243 GYPYGLEIKYYIVGDDGFLDIRSAYPDFTVYQ----DKTEKIFWERADVEGI---VNAFI 295
           G+   L ++ +  GD G L++    PD +  +       EK  W   D   +      F+
Sbjct: 258 GHLNELRLRLH--GDRGALEVIHT-PDGSSLRGCMGPDVEKAVWRTVDAGTVPTNYQRFV 314

Query: 296 DAIQ 299
           +A++
Sbjct: 315 EAVK 318


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.318    0.139    0.404 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126223495
Number of Sequences: 2977
Number of extensions: 5520525
Number of successful extensions: 13699
Number of sequences better than 1.0e-10: 55
Number of HSP's better than  0.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 13601
Number of HSP's gapped (non-prelim): 61
length of query: 335
length of database: 189,106,746
effective HSP length: 55
effective length of query: 280
effective length of database: 156,189,961
effective search space: 43733189080
effective search space used: 43733189080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 165 (68.7 bits)