BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1143 (PAB1143) DE:Hypothetical protein
         (537 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||G75025 hypothetical protein PAB1143 - Pyrococcus abyssi (st...  1115  0.0
pir||E71210 hypothetical protein PH1949 - Pyrococcus horikoshii ...   998  0.0
emb|CAC11433.1| (AL445063) conserved hypothetical protein [Therm...   343  3e-93
gb|AAK40915.1| Conserved hypothetical protein [Sulfolobus solfat...   228  2e-58
emb|CAB57696.1| (Y18930) hypothetical protein [Sulfolobus solfat...   228  2e-58
emb|CAC12035.1| (AL445065) conserved hypothetical protein [Therm...   221  1e-56
gb|AAK40798.1| Conserved hypothetical protein [Sulfolobus solfat...   217  3e-55
gb|AAK42986.1| Conserved hypothetical protein [Sulfolobus solfat...   172  8e-42

>pir||G75025 hypothetical protein PAB1143 - Pyrococcus abyssi (strain Orsay)
           >gi|5459159|emb|CAB50645.1| (AJ248288) hypothetical
           protein [Pyrococcus abyssi]
           Length = 537
           
 Score = 1115 bits (2853), Expect = 0.0
 Identities = 537/537 (100%), Positives = 537/537 (100%)

Query: 1   MIKMARIVLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFLDSQIPDENGILTQAPY 60
           MIKMARIVLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFLDSQIPDENGILTQAPY
Sbjct: 1   MIKMARIVLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFLDSQIPDENGILTQAPY 60

Query: 61  GLRKVEAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTNGGQW 120
           GLRKVEAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTNGGQW
Sbjct: 61  GLRKVEAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTNGGQW 120

Query: 121 RSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEH 180
           RSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEH
Sbjct: 121 RSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEH 180

Query: 181 VACEIFQDIINENASETVFIRGWPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRV 240
           VACEIFQDIINENASETVFIRGWPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRV
Sbjct: 181 VACEIFQDIINENASETVFIRGWPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRV 240

Query: 241 ARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKYT 300
           ARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKYT
Sbjct: 241 ARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKYT 300

Query: 301 RNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKPF 360
           RNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKPF
Sbjct: 301 RNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKPF 360

Query: 361 SPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGNR 420
           SPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGNR
Sbjct: 361 SPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGNR 420

Query: 421 AHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQFLHLYYAWKHLAKEILKGLPKVMRGNPF 480
           AHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQFLHLYYAWKHLAKEILKGLPKVMRGNPF
Sbjct: 421 AHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQFLHLYYAWKHLAKEILKGLPKVMRGNPF 480

Query: 481 LIPFFPLARLGVRIVLRQIEKWGKKKGFEVKKLEPLDIRIEVDEFRWNYKPSLAEAY 537
           LIPFFPLARLGVRIVLRQIEKWGKKKGFEVKKLEPLDIRIEVDEFRWNYKPSLAEAY
Sbjct: 481 LIPFFPLARLGVRIVLRQIEKWGKKKGFEVKKLEPLDIRIEVDEFRWNYKPSLAEAY 537


>pir||E71210 hypothetical protein PH1949 - Pyrococcus horikoshii
           >gi|3258393|dbj|BAA31076.1| (AP000007) 537aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 537
           
 Score =  998 bits (2552), Expect = 0.0
 Identities = 461/537 (85%), Positives = 510/537 (94%)

Query: 1   MIKMARIVLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFLDSQIPDENGILTQAPY 60
           M+KMA+IVLTTDETLTSTYH+VPLLDF GCAPYDKIPKWVFRFLDSQIPD+NG+LTQAPY
Sbjct: 1   MVKMAKIVLTTDETLTSTYHNVPLLDFFGCAPYDKIPKWVFRFLDSQIPDKNGVLTQAPY 60

Query: 61  GLRKVEAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTNGGQW 120
           GLRK+EAALLRC PRED+VVAHPRKVEMF+DENTE+V LYEMDP GLGPVTMMFTNGGQW
Sbjct: 61  GLRKIEAALLRCYPREDVVVAHPRKVEMFLDENTEIVGLYEMDPFGLGPVTMMFTNGGQW 120

Query: 121 RSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEH 180
           +SYTYVKFREL+E+IN +RE + LKFKIVVGGPGAWQ++MR++ERE LKIDHVV+GE EH
Sbjct: 121 KSYTYVKFRELVEKINSVRERKGLKFKIVVGGPGAWQVDMRKEEREELKIDHVVMGEAEH 180

Query: 181 VACEIFQDIINENASETVFIRGWPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRV 240
           V C+IF+DIIN +A ET+ IR  PK+EEIPTIV+PSYKGLVEVMRGCGRGCRFCEPNLRV
Sbjct: 181 VICKIFEDIINGSADETIIIRKGPKIEEIPTIVAPSYKGLVEVMRGCGRGCRFCEPNLRV 240

Query: 241 ARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKYT 300
           AR++PLEKIE EI+VN+NAGIDHAWLHSEDIFLYKVED+KNFYPNAEAVIELFEMAR+YT
Sbjct: 241 ARYMPLEKIEKEIRVNINAGIDHAWLHSEDIFLYKVEDKKNFYPNAEAVIELFEMARQYT 300

Query: 301 RNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKPF 360
           +NVNPTHGTVAGALAVPGMIEEISRIVEA + HW+GIQVG+ETADPEIIGRLMNNKMKPF
Sbjct: 301 KNVNPTHGTVAGALAVPGMIEEISRIVEAGDTHWVGIQVGLETADPEIIGRLMNNKMKPF 360

Query: 361 SPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGNR 420
           SPEEWPWV+LNGTYV NKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGNR
Sbjct: 361 SPEEWPWVVLNGTYVLNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGNR 420

Query: 421 AHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQFLHLYYAWKHLAKEILKGLPKVMRGNPF 480
           AHFTVTPLAFVPMGVLKGE+FY+VE+MITYGQFLHLYYAWKHLAKEI++GLPKVM GN F
Sbjct: 421 AHFTVTPLAFVPMGVLKGEQFYKVEEMITYGQFLHLYYAWKHLAKEIVRGLPKVMWGNLF 480

Query: 481 LIPFFPLARLGVRIVLRQIEKWGKKKGFEVKKLEPLDIRIEVDEFRWNYKPSLAEAY 537
           L+P FPLAR G+R+VL+QIEKWGKKKGFEVKKL+PLD++I+VDE  W  KPSLAEAY
Sbjct: 481 LVPLFPLARFGIRVVLKQIEKWGKKKGFEVKKLDPLDVKIDVDEHVWGTKPSLAEAY 537


>emb|CAC11433.1| (AL445063) conserved hypothetical protein [Thermoplasma
           acidophilum]
           Length = 554
           
 Score =  343 bits (870), Expect = 3e-93
 Identities = 197/543 (36%), Positives = 301/543 (55%), Gaps = 44/543 (8%)

Query: 8   VLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFLDS-QIPDENGILTQAPYGLRKVE 66
           +L +D TL+  Y   PLLDFL CAP   IP  ++RFL   + P+ NGI+  APY +RK+E
Sbjct: 1   MLVSDTTLSYEYRHFPLLDFLPCAPGKAIPGPIYRFLKGPEPPNVNGIVKYAPYAIRKIE 60

Query: 67  AALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTN--GGQWRSYT 124
           A+L+R   R+ +VV     +  ++D+ TEV+ +  MDPLGLGP TM +    GG   ++ 
Sbjct: 61  ASLVRAFGRDSVVVVDEDYLGQYVDDKTEVIGVSTMDPLGLGPTTMSYYALFGGDLDAWV 120

Query: 125 YVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEHVACE 184
             ++  L+E++N+ RE +K K  ++VGGPG W+  + RDE ++ K+D+ V GE + V  E
Sbjct: 121 RREWDSLMEKVNKAREGKKAK--LIVGGPGVWEFTILRDEIDKYKVDYYVQGETDDVVAE 178

Query: 185 IFQDIINENASETVFIRGW---------------------------PKVEEIPTIVSPSY 217
           +F+ +  +N  + +F  G+                           P++E+IP I++PS 
Sbjct: 179 LFRQVAEDNIDKQMFFNGYMSYDENFHKVLKKDEKFLARGITQSAYPRLEDIPEIINPSM 238

Query: 218 KGLVEVMRGCGRGCRFCEPNLRVARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVE 277
           KG+VEVMRGCG GC FCE  LR  R++PL  I  EIK+N+  G+D+AWLHS++IF YK  
Sbjct: 239 KGMVEVMRGCGVGCDFCEVTLRPLRYMPLNMIVDEIKINVAGGVDNAWLHSDEIFGYK-- 296

Query: 278 DRKNFYPNAEAVIELFE--MARKYTRNVNPTHGTVAGALAVPGMIEEISRIVEANENHWI 335
               F PN EA+ ELF   M+    +  NPTHG ++     P M+E++S+I++A   +WI
Sbjct: 297 HGHFFEPNEEALSELFSTVMSVPGVKTSNPTHGRISIPAGYPEMMEKLSKILKAGPRNWI 356

Query: 336 GIQVGMETADPEIIGRLMNNKMKPFS---PEEWPWVLLNGTYVFNKNYWFPAYTTILGLP 392
           GIQ G+ET   E+  + M NK  P        W  ++  G +V  +NYW  A+T  +G  
Sbjct: 357 GIQTGLETGSEELAKKHMPNKTLPLRIGVDGSWQDIVWQGVFVETRNYWRSAFTIQVGQE 416

Query: 393 GDNDDAEIMTARLIITMEKELEEKLGNRAHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQ 452
           G+  +    T  LI  +     +  G    FTVTPL  VP+G +K ++      M+    
Sbjct: 417 GETPEDLWETIALINKLSNSYVD--GRPFEFTVTPLVNVPLGRIKSKKLN--TSMLDVNG 472

Query: 453 FLHLYYAWKHLAKEILKGLPKVMRGNPFL-IPFFPLARLGVRIVLRQIEKWGKKKGFEVK 511
               Y +++HLAK   +   +   GN FL +    L   G R+++  IEK  +K G ++ 
Sbjct: 473 LAVYYASYRHLAKMAARDGFRDAHGNAFLKLATGGLISFGGRLMMDFIEKKAQKAGVDID 532

Query: 512 KLE 514
           K++
Sbjct: 533 KVK 535


>gb|AAK40915.1| Conserved hypothetical protein [Sulfolobus solfataricus]
           Length = 506
           
 Score =  228 bits (574), Expect = 2e-58
 Identities = 151/508 (29%), Positives = 257/508 (49%), Gaps = 32/508 (6%)

Query: 8   VLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFL--DSQIPDENGILTQAPYGLRKV 65
           +LTTD  L + +H    L FLG  P   +P+ V+++L       D+ G   QAPYG+RKV
Sbjct: 11  ILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRPEQAPYGMRKV 70

Query: 66  EAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTNGGQWRSYTY 125
           EA L+    +  I+   P  ++  + +  + +     D    GP +  +    +     Y
Sbjct: 71  EAKLIDEGFKAAII--DPDHLDRHL-KYAKALMFSHHDYFAFGPPSSTWWGITKKEPINY 127

Query: 126 VKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEHVACEI 185
             F+ LI +   I+E++K   KI+VGGP  WQ   R D  E++ +D +V GE E V  ++
Sbjct: 128 KSFQALISK-PEIQEAKKRGMKILVGGPSTWQWLWREDMIEKVGVDTLVDGEGEKVVVKL 186

Query: 186 FQDII-NENASETVFIRG--WPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRVAR 242
            Q I+ NE   + V++ G   P +++I  I   S  G++E+MRGC R CRFC   +R  R
Sbjct: 187 AQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSVTIRPTR 246

Query: 243 FIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKYTRN 302
           + PLEKIE E++ N+ AG+ H  +HS+D+  Y        YP  E +I+L  + +KY + 
Sbjct: 247 YYPLEKIEKELQTNVRAGVRHGVVHSDDVLFY---GAVGIYPRPEPLIKLHTLVKKYYKT 303

Query: 303 VNPTHGTVAG---ALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKP 359
           +  +H ++A    +    G+I ++  I+  +E  ++G++VG+ET   ++   +M  K  P
Sbjct: 304 IAWSHASLAAIRYSEEKYGLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAKSAP 363

Query: 360 FSPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGN 419
           + PEE+P ++     + ++N   PA T I+GLP + +D    T  L+  +          
Sbjct: 364 YKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETEDDVYRTIELVDNLRP-------- 415

Query: 420 RAHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQFLHLYYAWK--HLAKEILKGLPKVMRG 477
                + P+ FVPMG  K  +++    +      L+    W   + A++I+      M+G
Sbjct: 416 -YRSILVPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSF--YMKG 472

Query: 478 NPFLIPFFPLARLGVRIV---LRQIEKW 502
            P  +P     +L +R     +R++EKW
Sbjct: 473 -PVYMPVRFALKLFLRFAKKKMREVEKW 499


>emb|CAB57696.1| (Y18930) hypothetical protein [Sulfolobus solfataricus]
           Length = 506
           
 Score =  228 bits (574), Expect = 2e-58
 Identities = 151/508 (29%), Positives = 257/508 (49%), Gaps = 32/508 (6%)

Query: 8   VLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFL--DSQIPDENGILTQAPYGLRKV 65
           +LTTD  L + +H    L FLG  P   +P+ V+++L       D+ G   QAPYG+RKV
Sbjct: 11  ILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRPEQAPYGMRKV 70

Query: 66  EAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTNGGQWRSYTY 125
           EA L+    +  I+   P  ++  + +  + +     D    GP +  +    +     Y
Sbjct: 71  EAKLIDEGFKAAII--DPDHLDRHL-KYAKALMFSHHDYFAFGPPSSTWWGITKKEPINY 127

Query: 126 VKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEHVACEI 185
             F+ LI +   I+E++K   KI+VGGP  WQ   R D  E++ +D +V GE E V  ++
Sbjct: 128 KSFQALISK-PEIQEAKKRGMKILVGGPSTWQWLWREDMIEKVGVDTLVDGEGEKVVVKL 186

Query: 186 FQDII-NENASETVFIRG--WPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRVAR 242
            Q I+ NE   + V++ G   P +++I  I   S  G++E+MRGC R CRFC   +R  R
Sbjct: 187 AQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSVTIRPTR 246

Query: 243 FIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKYTRN 302
           + PLEKIE E++ N+ AG+ H  +HS+D+  Y        YP  E +I+L  + +KY + 
Sbjct: 247 YYPLEKIEKELQTNVRAGVRHGVVHSDDVLFY---GAVGIYPRPEPLIKLHTLVKKYYKT 303

Query: 303 VNPTHGTVAG---ALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKP 359
           +  +H ++A    +    G+I ++  I+  +E  ++G++VG+ET   ++   +M  K  P
Sbjct: 304 IAWSHASLAAIRYSEEKYGLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAKSAP 363

Query: 360 FSPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGN 419
           + PEE+P ++     + ++N   PA T I+GLP + +D    T  L+  +          
Sbjct: 364 YKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETEDDVYRTIELVDNLRP-------- 415

Query: 420 RAHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQFLHLYYAWK--HLAKEILKGLPKVMRG 477
                + P+ FVPMG  K  +++    +      L+    W   + A++I+      M+G
Sbjct: 416 -YRSILVPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSF--YMKG 472

Query: 478 NPFLIPFFPLARLGVRIV---LRQIEKW 502
            P  +P     +L +R     +R++EKW
Sbjct: 473 -PVYMPVRFALKLFLRFAKKKMREVEKW 499


>emb|CAC12035.1| (AL445065) conserved hypothetical protein [Thermoplasma
           acidophilum]
           Length = 538
           
 Score =  221 bits (558), Expect = 1e-56
 Identities = 162/487 (33%), Positives = 245/487 (50%), Gaps = 35/487 (7%)

Query: 7   IVLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVF-RFLDSQIPD-ENGILTQAPYGLRK 64
           +VLT+D    + Y+    L ++ C P   +P++   RF    I   +NG    APYGLRK
Sbjct: 5   VVLTSDRGTFTDYNGSSPLGYVACLPARLVPRFFMDRFFTPPIKAYDNGEAVTAPYGLRK 64

Query: 65  VEAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPV----TMMFTNGGQW 120
           VEA L        +VV+ P  +E  +D +T+V+ +   DP  L PV    TM+F  G  W
Sbjct: 65  VEAIL--ASKGISVVVSPPEYLEKTVDASTKVLGVNVHDPYALSPVSTKLTMIFGGGDSW 122

Query: 121 RSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEH 180
              T   FREL E++ +++   K  FK++VGGPGAWQ+ M   +     +D V+ GE E 
Sbjct: 123 ---TAKFFRELGEKVRKLKA--KYGFKVIVGGPGAWQVAMDMPDW----VDAVLDGEAEI 173

Query: 181 VACEIFQDIINENASETVFIRGWPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRV 240
              E+ + +        V     PKVEEIPTI+ PS  G V++ RGC RGC+FC      
Sbjct: 174 DFPELVRKMEKNEPIPKVTYGRMPKVEEIPTIIKPSRFGEVQITRGCPRGCQFCSITPET 233

Query: 241 ARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKY- 299
            R IP+E I  E+++N++ GI    L ++DI LY     K    N EA++ LF   +K  
Sbjct: 234 FRSIPIEDIVKEVQLNIDHGITGIELLTDDIMLY---GSKKLQVNHEALVNLFTTVKKMG 290

Query: 300 TRNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKP 359
             ++   H +  GA + P  +E I+ I E ++       VG+E+    II + M  K  P
Sbjct: 291 ATHIYFPHISAPGAKSSPKTVEAIAEIAEYDKYPAEAPVVGLESGSERIISKYMRGKPFP 350

Query: 360 FSPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGN 419
           ++P +W  V+++ T +   N+  P YT  +G P D  D +I  +  ++    +L+ K   
Sbjct: 351 WTPHDWGDVIIDATGIMVDNHIHPCYTMTIGYP-DETDEDIEESIKLVERMIDLDLKA-- 407

Query: 420 RAHFTVTPLAFVPMGV--LKGEEFYRVEDMITYGQFLHLYYAWKH---LAKEILKGLPKV 474
                + PL  +PM    LKG EF  + D I    +  LY +WKH   + K++   L   
Sbjct: 408 ----WIFPLPVIPMTASRLKGNEFPWI-DTIPKKYWDILYISWKHSIKVTKDLFPYLTSE 462

Query: 475 MRGNPFL 481
           MR NP +
Sbjct: 463 MR-NPII 468


>gb|AAK40798.1| Conserved hypothetical protein [Sulfolobus solfataricus]
           Length = 541
           
 Score =  217 bits (546), Expect = 3e-55
 Identities = 149/466 (31%), Positives = 236/466 (49%), Gaps = 32/466 (6%)

Query: 7   IVLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVF-RFLDSQIP-DENGILTQAPYGLRK 64
           I+LT D+   + Y    +L ++ C P   IPK+   RF    +P D  G    APY LRK
Sbjct: 18  IILTADKGSFTDYGGSSVLGYVACMPSRLIPKFFMDRFFTPDVPVDSEGRAIVAPYALRK 77

Query: 65  VEAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVT----MMFTNGGQW 120
           VE+ L+     + +VV  P ++E  I++ T+VV L   DP GL PV+    M+F  G  W
Sbjct: 78  VESTLVHA-GFDSVVVIPPHRLEKAINQKTKVVGLTVHDPFGLNPVSFKLSMIFGGGPTW 136

Query: 121 RSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEH 180
              T   F E  E+I++++   K  FK++VGGPG+W+L     +      D + IGE E 
Sbjct: 137 ---TAKYFEEFGEKISKLKS--KYNFKVIVGGPGSWELTKENKDWA----DVIFIGEAEA 187

Query: 181 VACEIFQDIINENASETVFIRGWPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRV 240
               + + II+      V     PKV EIP I++P+  G V++ RGC RGC+FC      
Sbjct: 188 DLPRVVKSIIDGQEVPKVVYGKNPKVNEIPPIINPARLGEVQITRGCPRGCQFCPITPET 247

Query: 241 ARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELF-EMARKY 299
            R IPL+ ++ E++VNM AG+      ++D+ LY     +    N EA+ +LF E     
Sbjct: 248 FRTIPLDVVKKEVEVNMRAGVKRVEFITDDVLLY---GSQKLRVNHEAITKLFTETMNMG 304

Query: 300 TRNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKP 359
              +   H +     + P  ++ +S I   +E+      VG+E+   +I+ + M  K  P
Sbjct: 305 VDGIWFPHISAPAVRSSPQTVKAMSEIARYDEDRAAAPVVGLESGSEKILSKYMRAKPFP 364

Query: 360 FSPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGD-NDDAEIMTARLIITMEKELEEKLG 418
           ++P EW  V+L+ T + N NY +P YT  +G P + N+D +    + I  ++  ++ KL 
Sbjct: 365 WTPREWKDVILDATAIMNDNYIYPCYTMTIGYPEETNEDVD----QSIDLVQSIIDHKL- 419

Query: 419 NRAHFTVTPLAFVPMGV--LKGEEFYRVEDMITYGQFLHLYYAWKH 462
                 + PL  +PMGV  ++   F  +E M T   +  LY +WK+
Sbjct: 420 ---KAWIFPLPVIPMGVSYIRNNPFPVLEKMPT-RYWDVLYISWKY 461


>gb|AAK42986.1| Conserved hypothetical protein [Sulfolobus solfataricus]
           Length = 502
           
 Score =  172 bits (432), Expect = 8e-42
 Identities = 123/395 (31%), Positives = 195/395 (49%), Gaps = 27/395 (6%)

Query: 50  DENGILTQAPYGLRKVEAALLRCCPREDIVVAHPRKVEMFI-DENTEVVALYEMDPLGLG 108
           D+ G    APY LRKVEA L +     ++VV  P K+E  +  + T+V+ +   DP G+ 
Sbjct: 18  DKEGKAIVAPYPLRKVEAVLAKS--GFNVVVTTPEKLEKVVTSKGTKVIGINVHDPRGIE 75

Query: 109 PVT----MMFTNGGQWRSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDE 164
           PV+    M+F  G  W   T   F EL E++++++E  K   K+VVGG GAWQLE     
Sbjct: 76  PVSAKLSMIFGGGETW---TAKFFDELGEKVSKLKE--KFHLKVVVGGAGAWQLEKDPPR 130

Query: 165 RERLKIDHVVIGEVEHVACEIFQDIINENASETVFIRGWP-KVEEIPTIVSPSYKGLVEV 223
                 D + +G  E    E+ + +        V    +P K++EIP I++PS  G V++
Sbjct: 131 WA----DVIFLGHAEVDFPEVVKKLEQGEEVPRVVRGRYPRKLDEIPPIINPSRGGEVQI 186

Query: 224 MRGCGRGCRFCEPNLRVARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFY 283
            RGC RGC FC          PL+ I  E++VNM AGI    L ++D+ LY  +      
Sbjct: 187 TRGCPRGCWFCSVTPDTFISFPLDYIMREVEVNMKAGIKDVSLITDDMLLYGAKRLNEV- 245

Query: 284 PNAEAVIELF-EMARKYTRNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGME 342
            N +A++ L+ E+ R     +N  H + A     P  ++ ++ I E NE   +   VG+E
Sbjct: 246 -NHDAIVRLYAELKRAGVDYINFAHISAAPVKLSPKTVKAMAEIAEWNEEKAVSPVVGLE 304

Query: 343 TADPEIIGRLMNNKMKPFSPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMT 402
           T   +I  + M  K  P++   W  +++  T + N++Y FP YT  +G P + D     +
Sbjct: 305 TGSEKIFNKYMKMKAFPWNYTNWKDLIVESTAIMNESYIFPCYTMTIGYPEETDKDVEDS 364

Query: 403 ARLIITMEKELEEKLGNRAHFTVTPLAFVPMGVLK 437
            +L+       E  + +     + PL  +PMG+ K
Sbjct: 365 IKLV-------EYIIDHEPIAWIFPLPVIPMGLSK 392


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.323    0.141    0.437 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 213073663
Number of Sequences: 2977
Number of extensions: 9552830
Number of successful extensions: 17344
Number of sequences better than 1.0e-10: 8
Number of HSP's better than  0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 17306
Number of HSP's gapped (non-prelim): 8
length of query: 537
length of database: 189,106,746
effective HSP length: 52
effective length of query: 485
effective length of database: 157,985,422
effective search space: 76622929670
effective search space used: 76622929670
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 167 (69.5 bits)