BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1143 (PAB1143) DE:Hypothetical protein
(537 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75025 hypothetical protein PAB1143 - Pyrococcus abyssi (st... 1115 0.0
pir||E71210 hypothetical protein PH1949 - Pyrococcus horikoshii ... 998 0.0
emb|CAC11433.1| (AL445063) conserved hypothetical protein [Therm... 343 3e-93
gb|AAK40915.1| Conserved hypothetical protein [Sulfolobus solfat... 228 2e-58
emb|CAB57696.1| (Y18930) hypothetical protein [Sulfolobus solfat... 228 2e-58
emb|CAC12035.1| (AL445065) conserved hypothetical protein [Therm... 221 1e-56
gb|AAK40798.1| Conserved hypothetical protein [Sulfolobus solfat... 217 3e-55
gb|AAK42986.1| Conserved hypothetical protein [Sulfolobus solfat... 172 8e-42
>pir||G75025 hypothetical protein PAB1143 - Pyrococcus abyssi (strain Orsay)
>gi|5459159|emb|CAB50645.1| (AJ248288) hypothetical
protein [Pyrococcus abyssi]
Length = 537
Score = 1115 bits (2853), Expect = 0.0
Identities = 537/537 (100%), Positives = 537/537 (100%)
Query: 1 MIKMARIVLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFLDSQIPDENGILTQAPY 60
MIKMARIVLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFLDSQIPDENGILTQAPY
Sbjct: 1 MIKMARIVLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFLDSQIPDENGILTQAPY 60
Query: 61 GLRKVEAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTNGGQW 120
GLRKVEAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTNGGQW
Sbjct: 61 GLRKVEAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTNGGQW 120
Query: 121 RSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEH 180
RSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEH
Sbjct: 121 RSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEH 180
Query: 181 VACEIFQDIINENASETVFIRGWPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRV 240
VACEIFQDIINENASETVFIRGWPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRV
Sbjct: 181 VACEIFQDIINENASETVFIRGWPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRV 240
Query: 241 ARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKYT 300
ARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKYT
Sbjct: 241 ARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKYT 300
Query: 301 RNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKPF 360
RNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKPF
Sbjct: 301 RNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKPF 360
Query: 361 SPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGNR 420
SPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGNR
Sbjct: 361 SPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGNR 420
Query: 421 AHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQFLHLYYAWKHLAKEILKGLPKVMRGNPF 480
AHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQFLHLYYAWKHLAKEILKGLPKVMRGNPF
Sbjct: 421 AHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQFLHLYYAWKHLAKEILKGLPKVMRGNPF 480
Query: 481 LIPFFPLARLGVRIVLRQIEKWGKKKGFEVKKLEPLDIRIEVDEFRWNYKPSLAEAY 537
LIPFFPLARLGVRIVLRQIEKWGKKKGFEVKKLEPLDIRIEVDEFRWNYKPSLAEAY
Sbjct: 481 LIPFFPLARLGVRIVLRQIEKWGKKKGFEVKKLEPLDIRIEVDEFRWNYKPSLAEAY 537
>pir||E71210 hypothetical protein PH1949 - Pyrococcus horikoshii
>gi|3258393|dbj|BAA31076.1| (AP000007) 537aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 537
Score = 998 bits (2552), Expect = 0.0
Identities = 461/537 (85%), Positives = 510/537 (94%)
Query: 1 MIKMARIVLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFLDSQIPDENGILTQAPY 60
M+KMA+IVLTTDETLTSTYH+VPLLDF GCAPYDKIPKWVFRFLDSQIPD+NG+LTQAPY
Sbjct: 1 MVKMAKIVLTTDETLTSTYHNVPLLDFFGCAPYDKIPKWVFRFLDSQIPDKNGVLTQAPY 60
Query: 61 GLRKVEAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTNGGQW 120
GLRK+EAALLRC PRED+VVAHPRKVEMF+DENTE+V LYEMDP GLGPVTMMFTNGGQW
Sbjct: 61 GLRKIEAALLRCYPREDVVVAHPRKVEMFLDENTEIVGLYEMDPFGLGPVTMMFTNGGQW 120
Query: 121 RSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEH 180
+SYTYVKFREL+E+IN +RE + LKFKIVVGGPGAWQ++MR++ERE LKIDHVV+GE EH
Sbjct: 121 KSYTYVKFRELVEKINSVRERKGLKFKIVVGGPGAWQVDMRKEEREELKIDHVVMGEAEH 180
Query: 181 VACEIFQDIINENASETVFIRGWPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRV 240
V C+IF+DIIN +A ET+ IR PK+EEIPTIV+PSYKGLVEVMRGCGRGCRFCEPNLRV
Sbjct: 181 VICKIFEDIINGSADETIIIRKGPKIEEIPTIVAPSYKGLVEVMRGCGRGCRFCEPNLRV 240
Query: 241 ARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKYT 300
AR++PLEKIE EI+VN+NAGIDHAWLHSEDIFLYKVED+KNFYPNAEAVIELFEMAR+YT
Sbjct: 241 ARYMPLEKIEKEIRVNINAGIDHAWLHSEDIFLYKVEDKKNFYPNAEAVIELFEMARQYT 300
Query: 301 RNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKPF 360
+NVNPTHGTVAGALAVPGMIEEISRIVEA + HW+GIQVG+ETADPEIIGRLMNNKMKPF
Sbjct: 301 KNVNPTHGTVAGALAVPGMIEEISRIVEAGDTHWVGIQVGLETADPEIIGRLMNNKMKPF 360
Query: 361 SPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGNR 420
SPEEWPWV+LNGTYV NKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGNR
Sbjct: 361 SPEEWPWVVLNGTYVLNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGNR 420
Query: 421 AHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQFLHLYYAWKHLAKEILKGLPKVMRGNPF 480
AHFTVTPLAFVPMGVLKGE+FY+VE+MITYGQFLHLYYAWKHLAKEI++GLPKVM GN F
Sbjct: 421 AHFTVTPLAFVPMGVLKGEQFYKVEEMITYGQFLHLYYAWKHLAKEIVRGLPKVMWGNLF 480
Query: 481 LIPFFPLARLGVRIVLRQIEKWGKKKGFEVKKLEPLDIRIEVDEFRWNYKPSLAEAY 537
L+P FPLAR G+R+VL+QIEKWGKKKGFEVKKL+PLD++I+VDE W KPSLAEAY
Sbjct: 481 LVPLFPLARFGIRVVLKQIEKWGKKKGFEVKKLDPLDVKIDVDEHVWGTKPSLAEAY 537
>emb|CAC11433.1| (AL445063) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 554
Score = 343 bits (870), Expect = 3e-93
Identities = 197/543 (36%), Positives = 301/543 (55%), Gaps = 44/543 (8%)
Query: 8 VLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFLDS-QIPDENGILTQAPYGLRKVE 66
+L +D TL+ Y PLLDFL CAP IP ++RFL + P+ NGI+ APY +RK+E
Sbjct: 1 MLVSDTTLSYEYRHFPLLDFLPCAPGKAIPGPIYRFLKGPEPPNVNGIVKYAPYAIRKIE 60
Query: 67 AALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTN--GGQWRSYT 124
A+L+R R+ +VV + ++D+ TEV+ + MDPLGLGP TM + GG ++
Sbjct: 61 ASLVRAFGRDSVVVVDEDYLGQYVDDKTEVIGVSTMDPLGLGPTTMSYYALFGGDLDAWV 120
Query: 125 YVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEHVACE 184
++ L+E++N+ RE +K K ++VGGPG W+ + RDE ++ K+D+ V GE + V E
Sbjct: 121 RREWDSLMEKVNKAREGKKAK--LIVGGPGVWEFTILRDEIDKYKVDYYVQGETDDVVAE 178
Query: 185 IFQDIINENASETVFIRGW---------------------------PKVEEIPTIVSPSY 217
+F+ + +N + +F G+ P++E+IP I++PS
Sbjct: 179 LFRQVAEDNIDKQMFFNGYMSYDENFHKVLKKDEKFLARGITQSAYPRLEDIPEIINPSM 238
Query: 218 KGLVEVMRGCGRGCRFCEPNLRVARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVE 277
KG+VEVMRGCG GC FCE LR R++PL I EIK+N+ G+D+AWLHS++IF YK
Sbjct: 239 KGMVEVMRGCGVGCDFCEVTLRPLRYMPLNMIVDEIKINVAGGVDNAWLHSDEIFGYK-- 296
Query: 278 DRKNFYPNAEAVIELFE--MARKYTRNVNPTHGTVAGALAVPGMIEEISRIVEANENHWI 335
F PN EA+ ELF M+ + NPTHG ++ P M+E++S+I++A +WI
Sbjct: 297 HGHFFEPNEEALSELFSTVMSVPGVKTSNPTHGRISIPAGYPEMMEKLSKILKAGPRNWI 356
Query: 336 GIQVGMETADPEIIGRLMNNKMKPFS---PEEWPWVLLNGTYVFNKNYWFPAYTTILGLP 392
GIQ G+ET E+ + M NK P W ++ G +V +NYW A+T +G
Sbjct: 357 GIQTGLETGSEELAKKHMPNKTLPLRIGVDGSWQDIVWQGVFVETRNYWRSAFTIQVGQE 416
Query: 393 GDNDDAEIMTARLIITMEKELEEKLGNRAHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQ 452
G+ + T LI + + G FTVTPL VP+G +K ++ M+
Sbjct: 417 GETPEDLWETIALINKLSNSYVD--GRPFEFTVTPLVNVPLGRIKSKKLN--TSMLDVNG 472
Query: 453 FLHLYYAWKHLAKEILKGLPKVMRGNPFL-IPFFPLARLGVRIVLRQIEKWGKKKGFEVK 511
Y +++HLAK + + GN FL + L G R+++ IEK +K G ++
Sbjct: 473 LAVYYASYRHLAKMAARDGFRDAHGNAFLKLATGGLISFGGRLMMDFIEKKAQKAGVDID 532
Query: 512 KLE 514
K++
Sbjct: 533 KVK 535
>gb|AAK40915.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 506
Score = 228 bits (574), Expect = 2e-58
Identities = 151/508 (29%), Positives = 257/508 (49%), Gaps = 32/508 (6%)
Query: 8 VLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFL--DSQIPDENGILTQAPYGLRKV 65
+LTTD L + +H L FLG P +P+ V+++L D+ G QAPYG+RKV
Sbjct: 11 ILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRPEQAPYGMRKV 70
Query: 66 EAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTNGGQWRSYTY 125
EA L+ + I+ P ++ + + + + D GP + + + Y
Sbjct: 71 EAKLIDEGFKAAII--DPDHLDRHL-KYAKALMFSHHDYFAFGPPSSTWWGITKKEPINY 127
Query: 126 VKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEHVACEI 185
F+ LI + I+E++K KI+VGGP WQ R D E++ +D +V GE E V ++
Sbjct: 128 KSFQALISK-PEIQEAKKRGMKILVGGPSTWQWLWREDMIEKVGVDTLVDGEGEKVVVKL 186
Query: 186 FQDII-NENASETVFIRG--WPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRVAR 242
Q I+ NE + V++ G P +++I I S G++E+MRGC R CRFC +R R
Sbjct: 187 AQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSVTIRPTR 246
Query: 243 FIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKYTRN 302
+ PLEKIE E++ N+ AG+ H +HS+D+ Y YP E +I+L + +KY +
Sbjct: 247 YYPLEKIEKELQTNVRAGVRHGVVHSDDVLFY---GAVGIYPRPEPLIKLHTLVKKYYKT 303
Query: 303 VNPTHGTVAG---ALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKP 359
+ +H ++A + G+I ++ I+ +E ++G++VG+ET ++ +M K P
Sbjct: 304 IAWSHASLAAIRYSEEKYGLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAKSAP 363
Query: 360 FSPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGN 419
+ PEE+P ++ + ++N PA T I+GLP + +D T L+ +
Sbjct: 364 YKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETEDDVYRTIELVDNLRP-------- 415
Query: 420 RAHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQFLHLYYAWK--HLAKEILKGLPKVMRG 477
+ P+ FVPMG K +++ + L+ W + A++I+ M+G
Sbjct: 416 -YRSILVPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSF--YMKG 472
Query: 478 NPFLIPFFPLARLGVRIV---LRQIEKW 502
P +P +L +R +R++EKW
Sbjct: 473 -PVYMPVRFALKLFLRFAKKKMREVEKW 499
>emb|CAB57696.1| (Y18930) hypothetical protein [Sulfolobus solfataricus]
Length = 506
Score = 228 bits (574), Expect = 2e-58
Identities = 151/508 (29%), Positives = 257/508 (49%), Gaps = 32/508 (6%)
Query: 8 VLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVFRFL--DSQIPDENGILTQAPYGLRKV 65
+LTTD L + +H L FLG P +P+ V+++L D+ G QAPYG+RKV
Sbjct: 11 ILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRPEQAPYGMRKV 70
Query: 66 EAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVTMMFTNGGQWRSYTY 125
EA L+ + I+ P ++ + + + + D GP + + + Y
Sbjct: 71 EAKLIDEGFKAAII--DPDHLDRHL-KYAKALMFSHHDYFAFGPPSSTWWGITKKEPINY 127
Query: 126 VKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEHVACEI 185
F+ LI + I+E++K KI+VGGP WQ R D E++ +D +V GE E V ++
Sbjct: 128 KSFQALISK-PEIQEAKKRGMKILVGGPSTWQWLWREDMIEKVGVDTLVDGEGEKVVVKL 186
Query: 186 FQDII-NENASETVFIRG--WPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRVAR 242
Q I+ NE + V++ G P +++I I S G++E+MRGC R CRFC +R R
Sbjct: 187 AQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSVTIRPTR 246
Query: 243 FIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKYTRN 302
+ PLEKIE E++ N+ AG+ H +HS+D+ Y YP E +I+L + +KY +
Sbjct: 247 YYPLEKIEKELQTNVRAGVRHGVVHSDDVLFY---GAVGIYPRPEPLIKLHTLVKKYYKT 303
Query: 303 VNPTHGTVAG---ALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKP 359
+ +H ++A + G+I ++ I+ +E ++G++VG+ET ++ +M K P
Sbjct: 304 IAWSHASLAAIRYSEEKYGLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAKSAP 363
Query: 360 FSPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGN 419
+ PEE+P ++ + ++N PA T I+GLP + +D T L+ +
Sbjct: 364 YKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETEDDVYRTIELVDNLRP-------- 415
Query: 420 RAHFTVTPLAFVPMGVLKGEEFYRVEDMITYGQFLHLYYAWK--HLAKEILKGLPKVMRG 477
+ P+ FVPMG K +++ + L+ W + A++I+ M+G
Sbjct: 416 -YRSILVPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSF--YMKG 472
Query: 478 NPFLIPFFPLARLGVRIV---LRQIEKW 502
P +P +L +R +R++EKW
Sbjct: 473 -PVYMPVRFALKLFLRFAKKKMREVEKW 499
>emb|CAC12035.1| (AL445065) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 538
Score = 221 bits (558), Expect = 1e-56
Identities = 162/487 (33%), Positives = 245/487 (50%), Gaps = 35/487 (7%)
Query: 7 IVLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVF-RFLDSQIPD-ENGILTQAPYGLRK 64
+VLT+D + Y+ L ++ C P +P++ RF I +NG APYGLRK
Sbjct: 5 VVLTSDRGTFTDYNGSSPLGYVACLPARLVPRFFMDRFFTPPIKAYDNGEAVTAPYGLRK 64
Query: 65 VEAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPV----TMMFTNGGQW 120
VEA L +VV+ P +E +D +T+V+ + DP L PV TM+F G W
Sbjct: 65 VEAIL--ASKGISVVVSPPEYLEKTVDASTKVLGVNVHDPYALSPVSTKLTMIFGGGDSW 122
Query: 121 RSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEH 180
T FREL E++ +++ K FK++VGGPGAWQ+ M + +D V+ GE E
Sbjct: 123 ---TAKFFRELGEKVRKLKA--KYGFKVIVGGPGAWQVAMDMPDW----VDAVLDGEAEI 173
Query: 181 VACEIFQDIINENASETVFIRGWPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRV 240
E+ + + V PKVEEIPTI+ PS G V++ RGC RGC+FC
Sbjct: 174 DFPELVRKMEKNEPIPKVTYGRMPKVEEIPTIIKPSRFGEVQITRGCPRGCQFCSITPET 233
Query: 241 ARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELFEMARKY- 299
R IP+E I E+++N++ GI L ++DI LY K N EA++ LF +K
Sbjct: 234 FRSIPIEDIVKEVQLNIDHGITGIELLTDDIMLY---GSKKLQVNHEALVNLFTTVKKMG 290
Query: 300 TRNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKP 359
++ H + GA + P +E I+ I E ++ VG+E+ II + M K P
Sbjct: 291 ATHIYFPHISAPGAKSSPKTVEAIAEIAEYDKYPAEAPVVGLESGSERIISKYMRGKPFP 350
Query: 360 FSPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMTARLIITMEKELEEKLGN 419
++P +W V+++ T + N+ P YT +G P D D +I + ++ +L+ K
Sbjct: 351 WTPHDWGDVIIDATGIMVDNHIHPCYTMTIGYP-DETDEDIEESIKLVERMIDLDLKA-- 407
Query: 420 RAHFTVTPLAFVPMGV--LKGEEFYRVEDMITYGQFLHLYYAWKH---LAKEILKGLPKV 474
+ PL +PM LKG EF + D I + LY +WKH + K++ L
Sbjct: 408 ----WIFPLPVIPMTASRLKGNEFPWI-DTIPKKYWDILYISWKHSIKVTKDLFPYLTSE 462
Query: 475 MRGNPFL 481
MR NP +
Sbjct: 463 MR-NPII 468
>gb|AAK40798.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 541
Score = 217 bits (546), Expect = 3e-55
Identities = 149/466 (31%), Positives = 236/466 (49%), Gaps = 32/466 (6%)
Query: 7 IVLTTDETLTSTYHDVPLLDFLGCAPYDKIPKWVF-RFLDSQIP-DENGILTQAPYGLRK 64
I+LT D+ + Y +L ++ C P IPK+ RF +P D G APY LRK
Sbjct: 18 IILTADKGSFTDYGGSSVLGYVACMPSRLIPKFFMDRFFTPDVPVDSEGRAIVAPYALRK 77
Query: 65 VEAALLRCCPREDIVVAHPRKVEMFIDENTEVVALYEMDPLGLGPVT----MMFTNGGQW 120
VE+ L+ + +VV P ++E I++ T+VV L DP GL PV+ M+F G W
Sbjct: 78 VESTLVHA-GFDSVVVIPPHRLEKAINQKTKVVGLTVHDPFGLNPVSFKLSMIFGGGPTW 136
Query: 121 RSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDERERLKIDHVVIGEVEH 180
T F E E+I++++ K FK++VGGPG+W+L + D + IGE E
Sbjct: 137 ---TAKYFEEFGEKISKLKS--KYNFKVIVGGPGSWELTKENKDWA----DVIFIGEAEA 187
Query: 181 VACEIFQDIINENASETVFIRGWPKVEEIPTIVSPSYKGLVEVMRGCGRGCRFCEPNLRV 240
+ + II+ V PKV EIP I++P+ G V++ RGC RGC+FC
Sbjct: 188 DLPRVVKSIIDGQEVPKVVYGKNPKVNEIPPIINPARLGEVQITRGCPRGCQFCPITPET 247
Query: 241 ARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFYPNAEAVIELF-EMARKY 299
R IPL+ ++ E++VNM AG+ ++D+ LY + N EA+ +LF E
Sbjct: 248 FRTIPLDVVKKEVEVNMRAGVKRVEFITDDVLLY---GSQKLRVNHEAITKLFTETMNMG 304
Query: 300 TRNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGMETADPEIIGRLMNNKMKP 359
+ H + + P ++ +S I +E+ VG+E+ +I+ + M K P
Sbjct: 305 VDGIWFPHISAPAVRSSPQTVKAMSEIARYDEDRAAAPVVGLESGSEKILSKYMRAKPFP 364
Query: 360 FSPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGD-NDDAEIMTARLIITMEKELEEKLG 418
++P EW V+L+ T + N NY +P YT +G P + N+D + + I ++ ++ KL
Sbjct: 365 WTPREWKDVILDATAIMNDNYIYPCYTMTIGYPEETNEDVD----QSIDLVQSIIDHKL- 419
Query: 419 NRAHFTVTPLAFVPMGV--LKGEEFYRVEDMITYGQFLHLYYAWKH 462
+ PL +PMGV ++ F +E M T + LY +WK+
Sbjct: 420 ---KAWIFPLPVIPMGVSYIRNNPFPVLEKMPT-RYWDVLYISWKY 461
>gb|AAK42986.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 502
Score = 172 bits (432), Expect = 8e-42
Identities = 123/395 (31%), Positives = 195/395 (49%), Gaps = 27/395 (6%)
Query: 50 DENGILTQAPYGLRKVEAALLRCCPREDIVVAHPRKVEMFI-DENTEVVALYEMDPLGLG 108
D+ G APY LRKVEA L + ++VV P K+E + + T+V+ + DP G+
Sbjct: 18 DKEGKAIVAPYPLRKVEAVLAKS--GFNVVVTTPEKLEKVVTSKGTKVIGINVHDPRGIE 75
Query: 109 PVT----MMFTNGGQWRSYTYVKFRELIERINRIRESRKLKFKIVVGGPGAWQLEMRRDE 164
PV+ M+F G W T F EL E++++++E K K+VVGG GAWQLE
Sbjct: 76 PVSAKLSMIFGGGETW---TAKFFDELGEKVSKLKE--KFHLKVVVGGAGAWQLEKDPPR 130
Query: 165 RERLKIDHVVIGEVEHVACEIFQDIINENASETVFIRGWP-KVEEIPTIVSPSYKGLVEV 223
D + +G E E+ + + V +P K++EIP I++PS G V++
Sbjct: 131 WA----DVIFLGHAEVDFPEVVKKLEQGEEVPRVVRGRYPRKLDEIPPIINPSRGGEVQI 186
Query: 224 MRGCGRGCRFCEPNLRVARFIPLEKIESEIKVNMNAGIDHAWLHSEDIFLYKVEDRKNFY 283
RGC RGC FC PL+ I E++VNM AGI L ++D+ LY +
Sbjct: 187 TRGCPRGCWFCSVTPDTFISFPLDYIMREVEVNMKAGIKDVSLITDDMLLYGAKRLNEV- 245
Query: 284 PNAEAVIELF-EMARKYTRNVNPTHGTVAGALAVPGMIEEISRIVEANENHWIGIQVGME 342
N +A++ L+ E+ R +N H + A P ++ ++ I E NE + VG+E
Sbjct: 246 -NHDAIVRLYAELKRAGVDYINFAHISAAPVKLSPKTVKAMAEIAEWNEEKAVSPVVGLE 304
Query: 343 TADPEIIGRLMNNKMKPFSPEEWPWVLLNGTYVFNKNYWFPAYTTILGLPGDNDDAEIMT 402
T +I + M K P++ W +++ T + N++Y FP YT +G P + D +
Sbjct: 305 TGSEKIFNKYMKMKAFPWNYTNWKDLIVESTAIMNESYIFPCYTMTIGYPEETDKDVEDS 364
Query: 403 ARLIITMEKELEEKLGNRAHFTVTPLAFVPMGVLK 437
+L+ E + + + PL +PMG+ K
Sbjct: 365 IKLV-------EYIIDHEPIAWIFPLPVIPMGLSK 392
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.323 0.141 0.437
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 213073663
Number of Sequences: 2977
Number of extensions: 9552830
Number of successful extensions: 17344
Number of sequences better than 1.0e-10: 8
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 17306
Number of HSP's gapped (non-prelim): 8
length of query: 537
length of database: 189,106,746
effective HSP length: 52
effective length of query: 485
effective length of database: 157,985,422
effective search space: 76622929670
effective search space used: 76622929670
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 167 (69.5 bits)