BLASTP 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= PAB1164 (dcd) DE:DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE (EC 3.5.4.13) (DCTP DEAMINASE). (154 letters) Database: ./suso.pep; /banques/blast2/nr.pep 598,487 sequences; 189,106,746 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||G75030 dCTP deaminase (EC 3.5.4.13) PAB1164 [similarity] - ... 312 2e-84 sp|O57706|DCD_PYRHO PROBABLE DEOXYCYTIDINE TRIPHOSPHATE DEAMINAS... 271 3e-72 sp|Q02103|DCD_ACIAM PROBABLE DEOXYCYTIDINE TRIPHOSPHATE DEAMINAS... 95 4e-19 emb|CAC11737.1| (AL445064) dCTP deaminase related protein [Therm... 94 8e-19 gb|AAC15873.1| (AF022221) dUTPase [Archaeal virus SIRV] 93 1e-18 sp|O67539|DCD_AQUAE DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE (DCTP D... 89 2e-17 sp|Q9YFA8|DCD_AERPE PROBABLE DEOXYCYTIDINE TRIPHOSPHATE DEAMINAS... 83 2e-15 gb|AAK40536.1| Deoxycytidine triphosphate deaminase (dcD-1) [Sul... 81 6e-15 dbj|BAB04087.1| (AP001508) deoxycytidine triphosphate deaminase ... 80 1e-14 sp|Q9X8W0|DCD_STRCO DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE (DCTP D... 74 1e-12 pir||A69114 dCTP deaminase (EC 3.5.4.13) MTH1847 [similarity] - ... 71 5e-12 sp|O27875|DCD_METTH PROBABLE DEOXYCYTIDINE TRIPHOSPHATE DEAMINAS... 71 5e-12 dbj|BAB12827.1| (AP001118) deoxycytidine triphosphate deaminase ... 71 9e-12 sp|P57209|DCD_BUCAI DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE (DCTP D... 71 9e-12 >pir||G75030 dCTP deaminase (EC 3.5.4.13) PAB1164 [similarity] - Pyrococcus abyssi (strain Orsay) >gi|5459199|emb|CAB50685.1| (AJ248288) DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE (EC 3.5.4.13) (DCTP DEAMINASE). [Pyrococcus abyssi] Length = 154 Score = 312 bits (790), Expect = 2e-84 Identities = 154/154 (100%), Positives = 154/154 (100%) Query: 1 MLLPDWKIRKEILIKPFSEESLQPAGYDLRVGKEAYIQGKFIDVEKEGKVIIPPKEYALI 60 MLLPDWKIRKEILIKPFSEESLQPAGYDLRVGKEAYIQGKFIDVEKEGKVIIPPKEYALI Sbjct: 1 MLLPDWKIRKEILIKPFSEESLQPAGYDLRVGKEAYIQGKFIDVEKEGKVIIPPKEYALI 60 Query: 61 LTLERIKLPDDIMGDMKIRSSLAREGVLGSFAWVDPGWDGNLTLMLYNASEKEVILRYKE 120 LTLERIKLPDDIMGDMKIRSSLAREGVLGSFAWVDPGWDGNLTLMLYNASEKEVILRYKE Sbjct: 61 LTLERIKLPDDIMGDMKIRSSLAREGVLGSFAWVDPGWDGNLTLMLYNASEKEVILRYKE 120 Query: 121 RFVQIAFLRLEAPAKNPYRGNYQGSRRIVLSKRS 154 RFVQIAFLRLEAPAKNPYRGNYQGSRRIVLSKRS Sbjct: 121 RFVQIAFLRLEAPAKNPYRGNYQGSRRIVLSKRS 154 >sp|O57706|DCD_PYRHO PROBABLE DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE (DCTP DEAMINASE) >gi|7435989|pir||E71216 dCTP deaminase (EC 3.5.4.13) PH1997 [similarity] - Pyrococcus horikoshii >gi|3258441|dbj|BAA31124.1| (AP000007) 156aa long hypothetical protein [Pyrococcus horikoshii] Length = 156 Score = 271 bits (686), Expect = 3e-72 Identities = 127/153 (83%), Positives = 141/153 (92%) Query: 1 MLLPDWKIRKEILIKPFSEESLQPAGYDLRVGKEAYIQGKFIDVEKEGKVIIPPKEYALI 60 MLLPDWKIRKEILI+PFSEESLQPAGYDLRVG+EA++ GK IDVEKEGKV+IPP+EYALI Sbjct: 1 MLLPDWKIRKEILIEPFSEESLQPAGYDLRVGREAFVSGKLIDVEKEGKVVIPPREYALI 60 Query: 61 LTLERIKLPDDIMGDMKIRSSLAREGVLGSFAWVDPGWDGNLTLMLYNASEKEVILRYKE 120 LTLER+KLPDD+MGDMKIRSSLAREG+LGSFAWVDPGWDGNLTLMLYNAS + V L+Y E Sbjct: 61 LTLERVKLPDDVMGDMKIRSSLAREGILGSFAWVDPGWDGNLTLMLYNASNEPVELKYGE 120 Query: 121 RFVQIAFLRLEAPAKNPYRGNYQGSRRIVLSKR 153 RFVQI F+RLE P +NPY GNYQGS R+V SKR Sbjct: 121 RFVQIVFIRLEDPPRNPYSGNYQGSTRLVFSKR 153 >sp|Q02103|DCD_ACIAM PROBABLE DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE (DCTP DEAMINASE) >gi|282684|pir||S26382 probable dCTP deaminase (EC 3.5.4.13) [similarity] - Desulfurolobus ambivalens >gi|40785|emb|CAA45033.1| (X63438) ORF3 [Acidianus ambivalens] Length = 173 Score = 95.2 bits (233), Expect = 4e-19 Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 14/154 (9%) Query: 12 ILIKPFSEESLQPAGYDLRVG---------KEAYIQGK----FIDVEKEGKVIIPPKEYA 58 I+I P ++++++ G DLRVG E Y GK F ++EK + II P E+ Sbjct: 17 IVISPLTQDTIRENGVDLRVGGEIARFKKTDEIYEDGKDPRSFYEIEKGDEFIIYPNEHV 76 Query: 59 LILTLERIKLPDDIMGDMKIRSSLAREGVLGSFAWVDPGWDGNLTLMLYNASEKEVILRY 118 L++T E +KLP+D+M + +RSS AR G+ VD G++G LT+ + S V ++ Sbjct: 77 LLVTEEYVKLPNDVMAFVNLRSSFARLGLFVPPTIVDAGFEGQLTIEVL-GSAFPVKIKR 135 Query: 119 KERFVQIAFLRLEAPAKNPYRGNYQGSRRIVLSK 152 RF+ + F R P +NPY G YQG + + L K Sbjct: 136 GTRFLHLIFARTLTPVENPYHGKYQGQQGVTLPK 169 >emb|CAC11737.1| (AL445064) dCTP deaminase related protein [Thermoplasma acidophilum] Length = 183 Score = 94.0 bits (230), Expect = 8e-19 Identities = 59/143 (41%), Positives = 81/143 (56%), Gaps = 14/143 (9%) Query: 12 ILIKPFSEESLQPAGYDLRVGKEAYIQGKFIDVE--KEGKVIIPPKEYALILTLERIKLP 69 ++ + F L P GYDLRV IDVE + + I + L+ T+E +K+P Sbjct: 34 LISENFDRGCLTPNGYDLRVDA--------IDVEGRQYSEFEIGKNVHFLVSTIEILKIP 85 Query: 70 DDIMGDMKIRSSLAREGVLGSFAWVDPGWDGNLTLMLYNASEKEVILRYKERFVQIAFLR 129 DD++G + RSS AR+G+ GSF +D G+ GNLTL +NA V LR ER QI F++ Sbjct: 86 DDVVGMIWTRSSFARKGIFGSFGAIDAGYHGNLTLSFFNAG-SAVNLRRGERIAQIVFVK 144 Query: 130 LEAPAKNPYR---GNYQGSRRIV 149 + A+ PY GNYQ SR IV Sbjct: 145 MIGSAEKPYHIRSGNYQNSRGIV 167 >gb|AAC15873.1| (AF022221) dUTPase [Archaeal virus SIRV] Length = 158 Score = 93.2 bits (228), Expect = 1e-18 Identities = 56/157 (35%), Positives = 90/157 (56%), Gaps = 6/157 (3%) Query: 1 MLLPDWKIR-----KEILIKPFSEESLQPAGYDLRVGKEAYIQGKFIDVEKEGKVIIPPK 55 M+L D I+ K+++I P SE++++ G DL++G E + ++ E + II P Sbjct: 1 MILSDRDIKTYINSKKLVINPLSEDTIRENGVDLKIGNEIVRIKENMEKEVGDEFIIYPN 60 Query: 56 EYALILTLERIKLPDDIMGDMKIRSSLAREGVLGSFAWVDPGWDGNLTLMLYNASEKEVI 115 E+ L+ T E IKL +DI+ +RS+ AR+G+L VD G++G LT+ L +S V Sbjct: 61 EHVLLTTKEYIKLSNDIIAFCNLRSTFARKGLLIPPTIVDAGFEGQLTIELVGSS-IPVK 119 Query: 116 LRYKERFVQIAFLRLEAPAKNPYRGNYQGSRRIVLSK 152 L+ ERF+ + F R P + PY G YQ + + L+K Sbjct: 120 LKSGERFLHLIFARTLTPVEKPYNGKYQKQKGVTLAK 156 >sp|O67539|DCD_AQUAE DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE (DCTP DEAMINASE) >gi|7435984|pir||A70439 probable dCTP deaminase (EC 3.5.4.13) dcd [similarity] - Aquifex aeolicus >gi|2983951|gb|AAC07499.1| (AE000747) deoxycytidine triphosphate deaminase [Aquifex aeolicus] Length = 180 Score = 89.3 bits (218), Expect = 2e-17 Identities = 58/170 (34%), Positives = 95/170 (55%), Gaps = 18/170 (10%) Query: 1 MLLPDWKIRK-----EILIKPFSEESLQPAGYDLRVGKE-AYIQGK-FIDVEKEGKVI-- 51 M+L D IR+ E+ ++P+ +Q + DLR+G + A +G+ IDV+K K + Sbjct: 1 MILSDRSIRELIEKGELKVEPYEPSHVQCSSLDLRLGNQIALYEGEGVIDVKKGTKGVRI 60 Query: 52 --------IPPKEYALILTLERIKLPDDIMGDMKIRSSLAREGV-LGSFAWVDPGWDGNL 102 I PK++ L TLE I LP + ++ RSSL R G+ + + WVD G++G + Sbjct: 61 LEFEEYFDIMPKQFLLATTLEYISLPPYVTAFVEGRSSLGRLGLFIENAGWVDAGFEGQI 120 Query: 103 TLMLYNASEKEVILRYKERFVQIAFLRLEAPAKNPYRGNYQGSRRIVLSK 152 TL L+NA+++ + L R Q+ F RL+ P + Y G Y+G + +V S+ Sbjct: 121 TLELFNANDRPIRLYRGMRICQLVFARLDRPPERVYSGKYKGQKGVVPSR 170 >sp|Q9YFA8|DCD_AERPE PROBABLE DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE (DCTP DEAMINASE) >gi|7435990|pir||D72724 probable dCTP deaminase (EC 3.5.4.13) APE0333 [similarity] - Aeropyrum pernix (strain K1) >gi|5103972|dbj|BAA79288.1| (AP000059) 181aa long hypothetical deoxycytidine triphosphate deaminase [Aeropyrum pernix] Length = 181 Score = 82.7 bits (201), Expect = 2e-15 Identities = 53/172 (30%), Positives = 92/172 (52%), Gaps = 21/172 (12%) Query: 1 MLLPDWKIRK-----EILIKPFSEESLQPAGYDLRVGK---------------EAYIQGK 40 ++L D IR +++++P S ++++ G DLR+G+ G+ Sbjct: 4 LILSDRDIRALLAIGDLVVEPLSGDTVRENGLDLRLGRGFCRFKRSDRVLDPRAPGSPGE 63 Query: 41 FIDVEKEGKVIIPPKEYALILTLERIKLPDDIMGDMKIRSSLAREGVLGSFAWVDPGWDG 100 F + + ++I+ P E+ L+ T E I+LP + G + +RS+ AR G+ VD G++G Sbjct: 64 FYECGEGDEIIVGPGEHMLLHTQEYIRLPGYVAGLVNLRSTWARTGIYIPATVVDAGFEG 123 Query: 101 NLTLMLYNASEKEVILRYKERFVQIAFLRLEAPAKNPYRGNYQGSRRIVLSK 152 LT+ + S V L +RF+ + ++L++PA NPYRG YQG R + L K Sbjct: 124 QLTIEVV-GSGFPVKLYPGDRFLHLVLVKLQSPAMNPYRGRYQGQRGVRLPK 174 >gb|AAK40536.1| Deoxycytidine triphosphate deaminase (dcD-1) [Sulfolobus solfataricus] Length = 206 Score = 81.1 bits (197), Expect = 6e-15 Identities = 52/154 (33%), Positives = 79/154 (50%), Gaps = 14/154 (9%) Query: 12 ILIKPFSEESLQPAGYDLRVGKEAYIQGK-------------FIDVEKEGKVIIPPKEYA 58 I I+P E++++ G DLRVG E K F EK + II P E+ Sbjct: 39 IKIQPLREDTIRENGVDLRVGNEIARFKKTDKIFDPDNPDPSFFQTEKGEEFIIQPYEHV 98 Query: 59 LILTLERIKLPDDIMGDMKIRSSLAREGVLGSFAWVDPGWDGNLTLMLYNASEKEVILRY 118 L+ T E I+L +D+M + +RS+ AR G+ VD G+ G +T+ + +S V L+ Sbjct: 99 LLTTEEYIELNNDVMAFVNLRSTFARLGLFIPPTIVDAGFKGQVTIEVVGSS-FPVKLKR 157 Query: 119 KERFVQIAFLRLEAPAKNPYRGNYQGSRRIVLSK 152 RF+ + F R P + PY+G YQG + + L K Sbjct: 158 STRFIHLIFARTLTPVEYPYQGKYQGQKGVTLPK 191 >dbj|BAB04087.1| (AP001508) deoxycytidine triphosphate deaminase [Bacillus halodurans] Length = 177 Score = 80.0 bits (194), Expect = 1e-14 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 16/158 (10%) Query: 10 KEILIKPFSEESLQPAGYDLRVG---------KEAYIQGKFIDVEKEGK-----VIIPPK 55 KE+ I P +EE +QPA DLR+G KEA I + +E +++PP Sbjct: 15 KELEITPLTEEQIQPASVDLRLGPHFVTIDDSKEAVISFERPIRYREWTTSDETIVLPPH 74 Query: 56 EYALILTLERIKLPDDIMGDMKIRSSLAREGV-LGSFAWVDPGWDGNLTLMLYNASEKEV 114 + L T+E +KLP+ + ++ RSS+ R G+ + + WVDPG++G +TL L+NA+ + Sbjct: 75 TFLLATTMETVKLPNHLTAFVEGRSSVGRLGLFIQNAGWVDPGFNGQITLELFNANRLPI 134 Query: 115 ILRYKERFVQIAFLRLEAPAKNPYRGNYQGSRRIVLSK 152 L R Q+ F + PY+G Y + +S+ Sbjct: 135 ELPIGRRICQLVFAEVTGEVA-PYQGKYLFQKGATMSE 171 >sp|Q9X8W0|DCD_STRCO DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE (DCTP DEAMINASE) >gi|7480599|pir||T36613 probable dCTP deaminase (EC 3.5.4.13) SCH35.46 [similarity] - Streptomyces coelicolor >gi|5019328|emb|CAB44381.1| (AL078610) putative deoxynucleotide triphosphate deaminase [Streptomyces coelicolor A3(2)] Length = 191 Score = 73.7 bits (178), Expect = 1e-12 Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 24/170 (14%) Query: 1 MLLPDWKIRKEI-----LIKPFSEESLQPAGYDLRVGK-----------------EAYIQ 38 MLL D IR EI I PF + +QP+ D+R+ + E Sbjct: 1 MLLSDKDIRAEIDNGRVRIDPFDDSMVQPSSIDVRLDRYFRVFENHRYPHIDPSVEQVDL 60 Query: 39 GKFIDVEKEGKVIIPPKEYALILTLERIKLPDDIMGDMKIRSSLAREGVL--GSFAWVDP 96 + ++ E + I+ P E+ L T E + LPDD+ ++ +SSL R G++ + ++DP Sbjct: 61 TRLVEPEGDEPFILHPGEFVLASTYEVVSLPDDLASRLEGKSSLGRLGLVTHSTAGFIDP 120 Query: 97 GWDGNLTLMLYNASEKEVILRYKERFVQIAFLRLEAPAKNPYRGNYQGSR 146 G+ G++TL L N + + L + Q+ RL +PA++PY GSR Sbjct: 121 GFSGHVTLELSNLATLPIKLWPGMKIGQLCLFRLTSPAEHPYGSERYGSR 170 >pir||A69114 dCTP deaminase (EC 3.5.4.13) MTH1847 [similarity] - Methanobacterium thermoautotrophicum (strain Delta H) >gi|2622982|gb|AAB86313.1| (AE000937) deoxycytidine triphosphate deaminase [Methanobacterium thermoautotrophicum] Length = 200 Score = 71.4 bits (172), Expect = 5e-12 Identities = 46/140 (32%), Positives = 73/140 (51%), Gaps = 20/140 (14%) Query: 19 EESLQPAGYDLRVGKE----AYIQGKFIDVE--------------KEGKVIIPPKEYALI 60 E +QP+ DLR+G E I+ ID + ++G II P E+AL Sbjct: 30 ERQIQPSSVDLRIGNEFKGFRVIRKPCIDPKDPSDIESYMETFHVEDGPFIIHPGEFALA 89 Query: 61 LTLERIKLPDDIMGDMKIRSSLAREGVLG--SFAWVDPGWDGNLTLMLYNASEKEVILRY 118 T E I LP+D++ ++ RSS+ R G+ + ++DPG+ G +TL + N + V L Sbjct: 90 TTHEYIALPEDLVARVEGRSSIGRLGITMHVTAGYIDPGFHGRITLEISNIGKMPVALYP 149 Query: 119 KERFVQIAFLRLEAPAKNPY 138 ++R QI F + +PA+ PY Sbjct: 150 RQRVCQIVFETMTSPAERPY 169 >sp|O27875|DCD_METTH PROBABLE DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE (DCTP DEAMINASE) Length = 197 Score = 71.4 bits (172), Expect = 5e-12 Identities = 46/140 (32%), Positives = 73/140 (51%), Gaps = 20/140 (14%) Query: 19 EESLQPAGYDLRVGKE----AYIQGKFIDVE--------------KEGKVIIPPKEYALI 60 E +QP+ DLR+G E I+ ID + ++G II P E+AL Sbjct: 27 ERQIQPSSVDLRIGNEFKGFRVIRKPCIDPKDPSDIESYMETFHVEDGPFIIHPGEFALA 86 Query: 61 LTLERIKLPDDIMGDMKIRSSLAREGVLG--SFAWVDPGWDGNLTLMLYNASEKEVILRY 118 T E I LP+D++ ++ RSS+ R G+ + ++DPG+ G +TL + N + V L Sbjct: 87 TTHEYIALPEDLVARVEGRSSIGRLGITMHVTAGYIDPGFHGRITLEISNIGKMPVALYP 146 Query: 119 KERFVQIAFLRLEAPAKNPY 138 ++R QI F + +PA+ PY Sbjct: 147 RQRVCQIVFETMTSPAERPY 166 >dbj|BAB12827.1| (AP001118) deoxycytidine triphosphate deaminase [Buchnera sp. APS] Length = 206 Score = 70.6 bits (170), Expect = 9e-12 Identities = 47/164 (28%), Positives = 79/164 (47%), Gaps = 28/164 (17%) Query: 3 LPDWKIRKEILIKPFSEESL-QPAGYDLRVGKEAYI----QGKFIDVE------------ 45 + +W RKE++I+P+ ++L D+ +G + G ID+ Sbjct: 21 IEEWLERKELIIEPYPNKTLINGITVDIHLGNKFRFFYEHTGSCIDLSNSKIIGGLSLTE 80 Query: 46 ---------KEGKVIIPPKEYALILTLERIKLPDDIMGDMKIRSSLAREGVL--GSFAWV 94 KE + P L T E IK+P++++G + RSSLAR G++ + + Sbjct: 81 IMSNEIIFSKEQPCFLQPGSLVLCSTFESIKMPNNLVGWLDGRSSLARLGLMIHATAHRI 140 Query: 95 DPGWDGNLTLMLYNASEKEVILRYKERFVQIAFLRLEAPAKNPY 138 DPGW+GN+ L ++NA + ++LR K R ++F L P PY Sbjct: 141 DPGWNGNIVLEMFNAGKLTLVLRPKMRIAALSFEVLSQPVLRPY 184 >sp|P57209|DCD_BUCAI DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE (DCTP DEAMINASE) Length = 193 Score = 70.6 bits (170), Expect = 9e-12 Identities = 47/164 (28%), Positives = 79/164 (47%), Gaps = 28/164 (17%) Query: 3 LPDWKIRKEILIKPFSEESL-QPAGYDLRVGKEAYI----QGKFIDVE------------ 45 + +W RKE++I+P+ ++L D+ +G + G ID+ Sbjct: 8 IEEWLERKELIIEPYPNKTLINGITVDIHLGNKFRFFYEHTGSCIDLSNSKIIGGLSLTE 67 Query: 46 ---------KEGKVIIPPKEYALILTLERIKLPDDIMGDMKIRSSLAREGVL--GSFAWV 94 KE + P L T E IK+P++++G + RSSLAR G++ + + Sbjct: 68 IMSNEIIFSKEQPCFLQPGSLVLCSTFESIKMPNNLVGWLDGRSSLARLGLMIHATAHRI 127 Query: 95 DPGWDGNLTLMLYNASEKEVILRYKERFVQIAFLRLEAPAKNPY 138 DPGW+GN+ L ++NA + ++LR K R ++F L P PY Sbjct: 128 DPGWNGNIVLEMFNAGKLTLVLRPKMRIAALSFEVLSQPVLRPY 171 Database: ./suso.pep Posted date: Jul 6, 2001 5:57 PM Number of letters in database: 840,471 Number of sequences in database: 2977 Database: /banques/blast2/nr.pep Posted date: Dec 14, 2000 12:46 PM Number of letters in database: 188,266,275 Number of sequences in database: 595,510 Lambda K H 0.320 0.141 0.412 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58791886 Number of Sequences: 2977 Number of extensions: 2297581 Number of successful extensions: 4272 Number of sequences better than 1.0e-10: 14 Number of HSP's better than 0.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 4247 Number of HSP's gapped (non-prelim): 14 length of query: 154 length of database: 189,106,746 effective HSP length: 52 effective length of query: 102 effective length of database: 157,985,422 effective search space: 16114513044 effective search space used: 16114513044 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.8 bits) S2: 162 (67.5 bits)