BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1171 (gcs1) DE:GLYCINE DEHYDROGENASE (DECARBOXYLATING)
SUBUNIT 1 (EC 1.4.4.2) (GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE
SYSTEM P- PROTEIN).
(449 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75030 probable glycine dehydrogenase (decarboxylating) (EC... 901 0.0
pir||C71216 probable glycine dehydrogenase subunit 1 - Pyrococcu... 857 0.0
gb|AAK41200.1| Glycine dehydrogenase subunit 1 [Sulfolobus solfa... 399 e-110
pir||G72518 probable glycine dehydrogenase subunit 1 APE2124 - A... 383 e-105
sp|P54376|GCS1_BACSU PROBABLE GLYCINE DEHYDROGENASE [DECARBOXYLA... 379 e-104
dbj|BAB06534.1| (AP001516) glycine dehydrogenase subunit 1 [Baci... 366 e-100
pir||G72403 glycine dehydrogenase (decarboxylating) subunit 1 - ... 347 1e-94
emb|CAC12479.1| (AL445067) glycine dehydrogenase (decarboxylatin... 327 2e-88
pir||F70395 glycine dehydrogenase (decarboxylating) - Aquifex ae... 323 3e-87
gb|AAG19868.1| (AE005071) glycine dehydrogenase subunit 1; GcvP1... 284 1e-75
sp|O49954|GCSP_SOLTU GLYCINE DEHYDROGENASE [DECARBOXYLATING], MI... 247 2e-64
pir||D83339 glycine cleavage system protein P2 PA2445 [imported]... 237 2e-61
gb|AAD56281.1|AF137264_1 (AF137264) glycine decarboxylase p prot... 237 2e-61
sp|P23378|GCSP_HUMAN GLYCINE DEHYDROGENASE [DECARBOXYLATING], MI... 236 4e-61
pir||T16734 hypothetical protein R12C12.1 - Caenorhabditis elega... 236 4e-61
gi|4504013 glycine dehydrogenase (decarboxylating; glycine decar... 235 6e-61
pir||T05309 probable glycine dehydrogenase (decarboxylating) (EC... 235 6e-61
sp|O49850|GCSP_FLAAN GLYCINE DEHYDROGENASE [DECARBOXYLATING], MI... 235 8e-61
sp|O49852|GCSP_FLATR GLYCINE DEHYDROGENASE [DECARBOXYLATING], MI... 235 1e-60
sp|Q09785|GCSP_SCHPO PUTATIVE GLYCINE DEHYDROGENASE [DECARBOXYLA... 234 1e-60
sp|P49362|GCSB_FLAPR GLYCINE DEHYDROGENASE [DECARBOXYLATING] B, ... 232 6e-60
pir||T02615 probable glycine dehydrogenase (decarboxylating) (EC... 232 6e-60
sp|P26969|GCSP_PEA GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITO... 231 9e-60
pir||S40216 P protein - Flaveria pringlei >gi|438003|emb|CAA8107... 231 1e-59
sp|P49361|GCSA_FLAPR GLYCINE DEHYDROGENASE [DECARBOXYLATING] A, ... 231 1e-59
gi|6323843 Glycine decarboxylase complex (P-subunit), glycine sy... 228 8e-59
pir||T44754 probable glycine dehydrogenase (decarboxylating) (EC... 226 4e-58
pir||E75352 glycine cleavage system P protein - Deinococcus radi... 225 7e-58
pir||A39521 glycine dehydrogenase (decarboxylating) (EC 1.4.4.2)... 224 1e-57
sp|P15505|GCSP_CHICK GLYCINE DEHYDROGENASE [DECARBOXYLATING], MI... 224 1e-57
pir||C82687 glycine decarboxylase XF1385 [imported] - Xylella fa... 224 2e-57
pir||S70896 aminomethyltransferase (EC 2.1.2.10) - yeast (Saccha... 223 4e-57
sp|Q50601|GCSP_MYCTU PROBABLE GLYCINE DEHYDROGENASE [DECARBOXYLA... 222 8e-57
gb|AAF54512.1| (AE003686) CG3999 gene product [Drosophila melano... 219 4e-56
pir||T46636 glycine dehydrogenase (decarboxylating) (EC 1.4.4.2)... 217 2e-55
gb|AAA63798.1| (U11693) victorin binding protein [Avena sativa] 215 1e-54
pir||S76257 hypothetical protein - Synechocystis sp. (strain PCC... 213 3e-54
sp|P33195|GCSP_ECOLI GLYCINE DEHYDROGENASE [DECARBOXYLATING] (GL... 212 7e-54
gb|AAA69071.1| (U28377) ORF_f957 [Escherichia coli] 212 7e-54
pir||E82994 glycine cleavage system protein P1 PA5213 [imported]... 209 5e-53
pir||D81821 glycine dehydrogenase (decarboxylating) (EC 1.4.4.2)... 203 5e-51
emb|CAA72254.1| (Y11467) putative glycine dehydrogenase (decarbo... 197 2e-49
dbj|BAB06533.1| (AP001516) glycine dehydrogenase subunit 2 [Baci... 115 1e-24
sp|P54377|GCS2_BACSU PROBABLE GLYCINE DEHYDROGENASE [DECARBOXYLA... 112 7e-24
pir||H72403 glycine dehydrogenase (decarboxylating) subunit 2 - ... 108 1e-22
pir||D75030 probable glycine dehydrogenase (decarboxylating) (EC... 102 8e-21
pir||B71216 probable glycine dehydrogenase subunit 2 - Pyrococcu... 100 3e-20
emb|CAC12478.1| (AL445067) glycine dehydrogenase (decarboxylatin... 97 4e-19
gb|AAK41199.1| Glycine dehydrogenase subunit 2 [Sulfolobus solfa... 90 6e-17
gb|AAB97081.1| (AF042072) glycine decarboxylase P subunit [Coffe... 89 1e-16
gb|AAB99844.1| (AF043097) glycine decarboxylase multi-enzyme com... 89 1e-16
gb|AAB99845.1| (AF043098) glycine decarboxylase multi-enzyme com... 89 1e-16
pir||H70463 glycine dehydrogenase (decarboxylating) - Aquifex ae... 88 2e-16
pir||D72518 probable glycine dehydrogenase subunit 2 APE2121 - A... 85 2e-15
>pir||E75030 probable glycine dehydrogenase (decarboxylating) (EC 1.4.4.2) chain
1 PAB1171 - Pyrococcus abyssi (strain Orsay)
>gi|5459197|emb|CAB50683.1| (AJ248288) GLYCINE
DEHYDROGENASE (DECARBOXYLATING) SUBUNIT 1 (EC 1.4.4.2)
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN). [Pyrococcus abyssi]
Length = 449
Score = 901 bits (2304), Expect = 0.0
Identities = 449/449 (100%), Positives = 449/449 (100%)
Query: 1 MAKHYIPNSAHKEEMLKEIGLSSIDELFADIPGKFIRDELNLPEGKSEYEVFLEMNEILG 60
MAKHYIPNSAHKEEMLKEIGLSSIDELFADIPGKFIRDELNLPEGKSEYEVFLEMNEILG
Sbjct: 1 MAKHYIPNSAHKEEMLKEIGLSSIDELFADIPGKFIRDELNLPEGKSEYEVFLEMNEILG 60
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQSLI 120
KNKTVLEMPTFLGAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQSLI
Sbjct: 61 KNKTVLEMPTFLGAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQSLI 120
Query: 121 AELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGPG 180
AELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGPG
Sbjct: 121 AELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGPG 180
Query: 181 VEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFVV 240
VEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFVV
Sbjct: 181 VEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFVV 240
Query: 241 GVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIG 300
GVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIG
Sbjct: 241 GVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIG 300
Query: 301 MTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEV 360
MTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEV
Sbjct: 301 MTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEV 360
Query: 361 ILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYYVGKHFPE 420
ILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYYVGKHFPE
Sbjct: 361 ILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYYVGKHFPE 420
Query: 421 LGESALFAATETTRKEWVDALISALREVI 449
LGESALFAATETTRKEWVDALISALREVI
Sbjct: 421 LGESALFAATETTRKEWVDALISALREVI 449
>pir||C71216 probable glycine dehydrogenase subunit 1 - Pyrococcus horikoshii
>gi|3258439|dbj|BAA31122.1| (AP000007) 449aa long
hypothetical glycine dehydrogenase subunit 1 [Pyrococcus
horikoshii]
Length = 449
Score = 857 bits (2189), Expect = 0.0
Identities = 418/449 (93%), Positives = 439/449 (97%)
Query: 1 MAKHYIPNSAHKEEMLKEIGLSSIDELFADIPGKFIRDELNLPEGKSEYEVFLEMNEILG 60
M HYIPNSAHKEEMLKEIGLSSI+ELFADIP KFI++ELNLPEGKSEYEVFLEMNEIL
Sbjct: 1 MGNHYIPNSAHKEEMLKEIGLSSIEELFADIPEKFIKEELNLPEGKSEYEVFLEMNEILE 60
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQSLI 120
KNKTVLEMPTFLGAGTYFHYIPAHVK+LIERSEFLT+YTPYQPEISQGMLQALFEYQSLI
Sbjct: 61 KNKTVLEMPTFLGAGTYFHYIPAHVKHLIERSEFLTSYTPYQPEISQGMLQALFEYQSLI 120
Query: 121 AELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGPG 180
AELVGLPVVN+SMYDWGTAMAEAALMTVRLH+GKRKKF+VP+HTHPERLQVL TY +GP
Sbjct: 121 AELVGLPVVNSSMYDWGTAMAEAALMTVRLHKGKRKKFVVPKHTHPERLQVLRTYTRGPE 180
Query: 181 VEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFVV 240
VEI TV WNERGQVD+EDLKEKVKDAAGVY+EIPNFFGLLEEE+RE+GEIAHEAGAYFVV
Sbjct: 181 VEIVTVNWNERGQVDVEDLKEKVKDAAGVYIEIPNFFGLLEEEIREVGEIAHEAGAYFVV 240
Query: 241 GVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIG 300
GVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAV+NDMKLIRQMPGR+IG
Sbjct: 241 GVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVKNDMKLIRQMPGRIIG 300
Query: 301 MTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEV 360
MTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGP+GIRELGEV
Sbjct: 301 MTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPKGIRELGEV 360
Query: 361 ILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYYVGKHFPE 420
ILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRF+KPY+EIHEELLKRNIHGGYYVG HFPE
Sbjct: 361 ILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFDKPYREIHEELLKRNIHGGYYVGSHFPE 420
Query: 421 LGESALFAATETTRKEWVDALISALREVI 449
LGE+ALFAATETTRKEWVDALISAL+EVI
Sbjct: 421 LGEAALFAATETTRKEWVDALISALKEVI 449
>gb|AAK41200.1| Glycine dehydrogenase subunit 1 [Sulfolobus solfataricus]
Length = 455
Score = 399 bits (1013), Expect = e-110
Identities = 217/458 (47%), Positives = 309/458 (67%), Gaps = 18/458 (3%)
Query: 1 MAKH-YIPNSAHKEEMLKEIGLSSIDELFADIPGKF-IRDELNLPEGK--SEYEVFLEMN 56
M KH ++PN +EMLKEIG++S+D+LF DIP + I L + + K SEYE+ E+
Sbjct: 1 MYKHPWLPNLDLTDEMLKEIGVNSLDDLFNDIPAEIKINRLLKVAKDKPLSEYEIEKEIY 60
Query: 57 EILGKNKTVLEMPTFLGAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEY 116
E + KN LE P F+GAG HYIP VK++I RSEF T+YTPYQPEISQG+LQALFEY
Sbjct: 61 EKVKKN-VELEAPPFIGAGICPHYIPNAVKFIIGRSEFYTSYTPYQPEISQGILQALFEY 119
Query: 117 QSLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYA 176
QSL+AEL+ + VVNASMYDWG+A+AEA LM R++ +K +VP + +P +V+ T+
Sbjct: 120 QSLMAELLEMDVVNASMYDWGSALAEAVLMANRING--KKTVLVPENANPFHKEVMRTWI 177
Query: 177 KGPGVEIETVKWNER-GQVDIEDLKEKVK--DAAGVYVEIPNFFGLLEEEVREIGEIAHE 233
+G G++IE VK+++ G+VDIEDL++K D + +YV+ PNFFG+ E + I ++A
Sbjct: 178 QGKGIKIEEVKYDKNSGEVDIEDLEKKSSSNDVSAIYVQQPNFFGIFESNIEHIIDVAKH 237
Query: 234 AGAYFVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQ 293
A ++GV+P LG+++ PG ADIVVG+ G P+NFGGP GIFAVR DM L+RQ
Sbjct: 238 KKALSIIGVNPLSLGLIKPPGSYEADIVVGDGQELGLPLNFGGPLMGIFAVRWDMGLVRQ 297
Query: 294 MPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRG 353
MPGR++G+T+D F + LQTREQ I+R KATSNI +NEAL+A+A A++++ LG G
Sbjct: 298 MPGRIVGITRDVNNNMGFTLILQTREQFIKREKATSNITTNEALLALANAVYLSLLGKEG 357
Query: 354 IRELGEVILKNTAYLKKRLSEVAEI--PFDGVNFKDVLVRFEKPYKEIHEELLKRNIHGG 411
IREL E I + Y KRL+E+ + PF F++ +++F Y I+++L +R + GG
Sbjct: 358 IRELAEEIYFRSHYAAKRLTEIDNVIMPFTSDFFEEFVIKFPIEYNIINDKLKERKLQGG 417
Query: 412 YYVGKHFPELGESALFAATETTRKEWVDALISALREVI 449
+ H ++LF TE K+ +D L+S ++E I
Sbjct: 418 LKLSIH------TSLFCVTEVHDKKSIDLLVSTIQEAI 449
>pir||G72518 probable glycine dehydrogenase subunit 1 APE2124 - Aeropyrum pernix
(strain K1) >gi|5105823|dbj|BAA81135.1| (AP000063) 471aa
long hypothetical glycine dehydrogenase subunit 1
[Aeropyrum pernix]
Length = 471
Score = 383 bits (974), Expect = e-105
Identities = 216/462 (46%), Positives = 298/462 (63%), Gaps = 20/462 (4%)
Query: 5 YIPNSAHK---EEMLKEIGLSSIDELFADIPGKFIR-----DELNLPEGK--SEYEVFLE 54
+IPNS HK +EML+ IG+SS+D+L+ DIP + D L + EG+ SE EV
Sbjct: 11 WIPNS-HKAILDEMLEAIGVSSVDDLYRDIPPTILLSPEEWDSLPIGEGRPLSEAEVLAR 69
Query: 55 MNEILGKNKTVLEMPTFLGAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALF 114
+N+IL +NK + P F+G G + Y+P+ VK LI R EFLTAYTPYQ EISQG++QALF
Sbjct: 70 INDILSRNKYFTDPPPFVGGGVWPRYVPSVVKALITRGEFLTAYTPYQAEISQGLMQALF 129
Query: 115 EYQSLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLET 174
EYQSL+AEL+ + VVNAS+YDW +A+ EA LM R+ R R + +VP +P L+ T
Sbjct: 130 EYQSLVAELLEMEVVNASLYDWSSAVGEAMLMARRVTR--RNRVLVPETMNPLHLETATT 187
Query: 175 YAKGPGVEIETVKWN-ERGQVDIEDLKEKVK--DAAGVYVEIPNFF-GLLEEEVREIGEI 230
YA G G+ +E V+ + E G +D+EDL+ ++ D A +Y+E P+ + G+++E V GE
Sbjct: 188 YAYGGGIRVEKVRVDRETGFIDLEDLESRLSQGDTAALYMEYPSSYTGVIDENVEAAGEA 247
Query: 231 AHEAGAYFVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKL 290
H+AG F++GV+P + I++ PG LGADI VG+ G +N+GGP G+FAVR D +L
Sbjct: 248 VHKAGGLFILGVEPVSMAILKPPGRLGADIAVGDGQPLGLGLNYGGPYLGVFAVRWDGRL 307
Query: 291 IRQMPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLG 350
+RQMPGRLIGMT DAEG+RAF M LQTREQHIRRAKATSNI +NEAL+A+AAA++++ LG
Sbjct: 308 VRQMPGRLIGMTVDAEGRRAFAMILQTREQHIRRAKATSNITTNEALMAIAAAVYLSLLG 367
Query: 351 PRGIRELGEVILKNTAYLKKRLSEV--AEIP-FDGVNFKDVLVRFEKPYKEIHEELLKRN 407
P+G+RE+ E + Y KRLSE+ E P +G D VR LL++
Sbjct: 368 PQGLREVAEASWYMSHYAAKRLSELRGVEAPLLEGEFIMDFTVRLPMDAGVARRRLLEKG 427
Query: 408 IHGGYYVGKHFPELGESALFAATETTRKEWVDALISALREVI 449
+ G +G L TE + VD L++ L V+
Sbjct: 428 VLAGIPLGGFSFFSDNDMLLTVTEAHTRRHVDLLVNLLDSVL 469
>sp|P54376|GCS1_BACSU PROBABLE GLYCINE DEHYDROGENASE [DECARBOXYLATING] SUBUNIT 1 (GLYCINE
DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM P-PROTEIN)
>gi|7451835|pir||A69959 glycine dehydrogenase homolog
yqhJ - Bacillus subtilis >gi|1303891|dbj|BAA12547.1|
(D84432) YqhJ [Bacillus subtilis]
>gi|2634890|emb|CAB14387.1| (Z99116) similar to glycine
dehydrogenase [Bacillus subtilis]
Length = 448
Score = 379 bits (962), Expect = e-104
Identities = 202/449 (44%), Positives = 293/449 (64%), Gaps = 10/449 (2%)
Query: 1 MAKHYIP-NSAHKEEMLKEIGLSSIDELFADIPGKF-IRDELNLPEGKSEYEVFLEMNEI 58
M Y+P K+EML IG+SSID+LFADIP + E + + KSE E+ E+ ++
Sbjct: 1 MKHRYLPATEKDKQEMLATIGVSSIDDLFADIPENVKYKKEHQIKKAKSETELTRELTKL 60
Query: 59 LGKNKTVLEMPTFLGAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQS 118
KN+ ++ +FLGAG Y HY P V ++I RSEF TAYTPYQPEISQG LQA+FE+Q+
Sbjct: 61 ASKNRDTVQYASFLGAGVYDHYQPVIVDHVISRSEFYTAYTPYQPEISQGELQAIFEFQT 120
Query: 119 LIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKG 178
+I EL G+ + N+SMYD GTA+AEAA++ K+KK +V + HPE +VL+TYAKG
Sbjct: 121 MICELTGMDIANSSMYDGGTALAEAAMLA--SGHTKKKKIVVSKTVHPESREVLKTYAKG 178
Query: 179 PGVEIETVKWNERGQVDIEDLKEKV-KDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAY 237
+++ V + G D++ L++ V ++ A V V+ PNFFG + E +++I IAH+ +
Sbjct: 179 QYIDVVEVPAAD-GVTDLDALRQTVCENTAAVIVQYPNFFGRI-EPLKDIEPIAHQGKSM 236
Query: 238 FVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGR 297
F+V +P LG++ PG+ +DIVVG+A FG P +GGP G FAV KL+R++PGR
Sbjct: 237 FIVSANPLALGLLTPPGKFQSDIVVGDAHRFGIPSAYGGPHCGFFAVTK--KLMRKVPGR 294
Query: 298 LIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIREL 357
L+G T+D GKR FV+TLQ REQHIRR KATSNICSN+AL A+AA++ + +LG G++++
Sbjct: 295 LVGQTEDENGKRGFVLTLQAREQHIRRDKATSNICSNQALNALAASVAMTALGKNGVKDI 354
Query: 358 GEVILKNTAYLKKRLSEVA-EIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYYVGK 416
L Y K+ + + FDG F + +++ ++P + +++ LL + + GGY +G
Sbjct: 355 ARQNLLKANYAKQEAKKAGLTVMFDGPMFNEFVIKLDEPVRAVNKRLLAKGMIGGYDLGL 414
Query: 417 HFPELGESALFAATETTRKEWVDALISAL 445
+PEL L A TE KE +DALI L
Sbjct: 415 TYPELDCHMLIAVTELRTKEEIDALIQEL 443
>dbj|BAB06534.1| (AP001516) glycine dehydrogenase subunit 1 [Bacillus halodurans]
Length = 447
Score = 366 bits (930), Expect = e-100
Identities = 202/443 (45%), Positives = 283/443 (63%), Gaps = 10/443 (2%)
Query: 1 MAKHYIPNSAH-KEEMLKEIGLSSIDELFADIPGKF-IRDELNLPEGKSEYEVFLEMNEI 58
M Y+P + ++EML+ IG+ SI+ELF+DIP + +LN+P E E+ ++
Sbjct: 1 MNHRYLPMTTDDRQEMLQAIGVDSIEELFSDIPQDIRFKGKLNIPNALKEPELIRYFQQL 60
Query: 59 LGKNKTVLEMPTFLGAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQS 118
+N + + +FLGAG Y HYIP+ V ++I RSEF TAYTPYQPEISQG LQA+FE+Q+
Sbjct: 61 ANENVHLKDKASFLGAGVYDHYIPSIVDHVISRSEFYTAYTPYQPEISQGELQAIFEFQT 120
Query: 119 LIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKG 178
+I EL G+ V N+SMYD TA+AEAA+M+ K+KK +V + HPE VL T A G
Sbjct: 121 MICELTGMEVANSSMYDGPTALAEAAMMS--CGHTKKKKILVSKAVHPEARDVLMTNAYG 178
Query: 179 PGVEIETVKWNERGQVDIEDLKEKV-KDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAY 237
+E+ + N G D+E LK ++ A V V+ PNFFG L E + EI ++H+ A
Sbjct: 179 QRLEVVEIDTN-NGVTDVEHLKALYDEETACVIVQHPNFFGRL-EPLAEIESVSHQGKAT 236
Query: 238 FVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGR 297
FVV +P LG+++ PG GAD+VVG+A FG P +GGP G FA KL+R++PGR
Sbjct: 237 FVVSSNPLALGLLKPPGAFGADVVVGDAQPFGIPTQYGGPHCGYFATTK--KLMRKVPGR 294
Query: 298 LIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIREL 357
L+G T D +G+R FV+TLQ REQHIRR KATSNICSN+AL A+AAA+ +A++G RG++E+
Sbjct: 295 LVGQTTDDQGQRGFVLTLQAREQHIRREKATSNICSNQALNALAAAVAMATIGKRGVKEM 354
Query: 358 GEVILKNTAYLKKRL-SEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYYVGK 416
++ AY K +L + EI +G F + +++ P E+ E LL + GY +GK
Sbjct: 355 ALQNVQKAAYAKSQLKANGVEIVAEGPCFNEFIIKLSSPLHEVEEALLAKGFIAGYDLGK 414
Query: 417 HFPELGESALFAATETTRKEWVD 439
+PEL L A TE KE +D
Sbjct: 415 VYPELEGHMLVAVTEVRTKEEID 437
>pir||G72403 glycine dehydrogenase (decarboxylating) subunit 1 - Thermotoga
maritima (strain MSB8)
>gi|4980711|gb|AAD35305.1|AE001706_4 (AE001706) glycine
dehydrogenase (decarboxylating) subunit 1 [Thermotoga
maritima]
Length = 437
Score = 347 bits (882), Expect = 1e-94
Identities = 196/445 (44%), Positives = 279/445 (62%), Gaps = 15/445 (3%)
Query: 5 YIPNSAHK-EEMLKEIGLSSIDELFADIPGKFIRDELNLPEGKSEYEVFLEMNEILGKNK 63
YIP++ ML IG+SSI+ELF+ IP R LN+PE + E+ VF ++ EI N
Sbjct: 5 YIPHTDEDVRAMLDFIGVSSIEELFSSIPVS-ARSSLNIPESRDEFSVFKQLKEISEMNN 63
Query: 64 TVLEMPTFLGAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQSLIAEL 123
++ + FLGAG Y Y+P V L + +FLTAYTPYQ E+SQG LQALFEYQ+++ EL
Sbjct: 64 SLEDYAVFLGAGVYKRYVPTVVYDLAMKPDFLTAYTPYQAEVSQGTLQALFEYQTMVCEL 123
Query: 124 VGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGPGVEI 183
G+ V NASMYD TA+AEAALM+ RL GK +K +V R HPE VL TY + G +
Sbjct: 124 TGMEVANASMYDGATALAEAALMSFRL-TGK-EKVVVARSVHPEYRAVLRTYLEKRGFTV 181
Query: 184 ETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAG-AYFVVGV 242
++E G+V +E++ E + A + V+ PNFFG++E ++ + +G A +V V
Sbjct: 182 VEAGYDETGRVLLEEVDE---ETAAIAVQYPNFFGIIE----DLDYVRSRSGNALLIVVV 234
Query: 243 DPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMT 302
+P L ++E PG GADIVVGE G PM FGG GIFA R + +RQMPGRLIG T
Sbjct: 235 EPVSLALLEPPGSYGADIVVGEGQSLGLPMWFGGYSLGIFATREE--YVRQMPGRLIGQT 292
Query: 303 KDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVIL 362
D G A+ M LQTREQHIRRA+ATSNICSN A A+ AA++++ +GP G++E+
Sbjct: 293 VDQAGNTAYTMILQTREQHIRRARATSNICSNHAHAALIAAVYMSVMGPDGLKEVARRSY 352
Query: 363 KNTAYLKKRLSEVA-EIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYYVGKHFPEL 421
YL++RL E+ ++ F G F + + + Y + +++++ I G + + +PEL
Sbjct: 353 NAAHYLQERLEEIGFKLCFSGEFFNEFVFNVPEDYPDRWRKMMEKKILGPLPLEEFYPEL 412
Query: 422 GESALFAATETTRKEWVDALISALR 446
G++AL ATE KE ++ L+ A++
Sbjct: 413 GDTALACATEVISKEDIEKLLEAMK 437
>emb|CAC12479.1| (AL445067) glycine dehydrogenase (decarboxylating) related protein,
subunit 1 [Thermoplasma acidophilum]
Length = 433
Score = 327 bits (829), Expect = 2e-88
Identities = 181/438 (41%), Positives = 273/438 (62%), Gaps = 15/438 (3%)
Query: 15 MLKEIGLSSIDELFADIPGKFIRDELNLPEGKSEYEVFLEMNEILGKNKTVLEMPTFLGA 74
ML +G+ +ELF+DIP + + + G EY V EI KNKT +M FLG
Sbjct: 7 MLNFLGMKDPEELFSDIPKSVRKKSIGIGGGLDEYRVIDRAMEIGRKNKT--DMINFLGN 64
Query: 75 GTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQSLIAELVGLPVVNASMY 134
G Y IP V Y++ + EFL +YTPYQPEISQGMLQ++FEYQSLI++L+G+ V NASMY
Sbjct: 65 GIYDRVIPEAVNYILSKPEFLDSYTPYQPEISQGMLQSMFEYQSLISDLMGMDVTNASMY 124
Query: 135 DWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGPGVEIETVKWNERGQV 194
D +A+ EAA M R++ K +VP ++ ++ VL Y G ++I + E G +
Sbjct: 125 DGYSALGEAARMAYRING--HSKILVPESSYDSKISVLRNYIWGLNMKIMKYRIGEDGMI 182
Query: 195 DIEDLKEKV-KDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFVVGVDPTILGIVEAP 253
D++DL K+ D + + VE PN +G+L++ + + +I +A + VDP LG+V+ P
Sbjct: 183 DLDDLSSKIDSDTSAIVVENPNGYGILDKNIFGVKDIKKDA--VLISYVDPISLGVVKPP 240
Query: 254 GELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDAEGKRAFVM 313
GE G+DI V E G PMNFGGP G+ + + M+ IR+ PGR+IG + D+ GKRA+VM
Sbjct: 241 GEYGSDIAVAEGQQLGIPMNFGGPLLGLMSFK--MEHIRRSPGRIIGESIDSNGKRAYVM 298
Query: 314 TLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVILKNTAYLKKRLS 373
TLQTREQHIRRAKATSNICSN+AL+ +AA+ +++ +G G+R++ + +K++ +K++LS
Sbjct: 299 TLQTREQHIRRAKATSNICSNQALLTLAASAYLSIMGSTGLRKVALLTIKHSRMIKEKLS 358
Query: 374 EVAEIP-FDGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYYVGKHFPE--LGESALFAAT 430
+ P F +F DV+ R E +++ E L +NI GG + + + + ++ F T
Sbjct: 359 SIGVKPYFSTESFSDVMFRLE---RDVMEALASKNILGGLKLRQLISDTPMKDATFFTVT 415
Query: 431 ETTRKEWVDALISALREV 448
E T ++ L +AL +
Sbjct: 416 EKTDAAAIEKLAAALEVI 433
>pir||F70395 glycine dehydrogenase (decarboxylating) - Aquifex aeolicus
>gi|2983571|gb|AAC07143.1| (AE000723) glycine
dehydrogenase (decarboxylating) [Aquifex aeolicus]
Length = 439
Score = 323 bits (818), Expect = 3e-87
Identities = 186/446 (41%), Positives = 274/446 (60%), Gaps = 14/446 (3%)
Query: 5 YIPNSAHK-EEMLKEIGLSSIDELFADIPGKFIRDELNLPEGKSEYEVFLEMNEILGKNK 63
YIP+S + +E+L ++GL S+++LF+ IP + + + PE KSE E + I +
Sbjct: 3 YIPHSEEETKEILSKLGLESLEDLFSHIPKELFAKDFSFPEPKSEEE----LRRIFERAC 58
Query: 64 TVLEMPT-FLGAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQSLIAE 122
E+P F+GAG Y IP+ + ++ R EFLT YTPYQ E SQG LQA+FEYQSLI E
Sbjct: 59 EDTELPLYFIGAGAYDRIIPSVIWQILSRGEFLTPYTPYQAEASQGTLQAIFEYQSLICE 118
Query: 123 LVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGPGVE 182
L G+ V NASMYD +A+AEA LM R +GK ++ + +P + ++TY +G +
Sbjct: 119 LTGMDVANASMYDGASALAEAVLM-ARAIKGKGDTVVLSKALNPLYRRTVKTYLRGYEDK 177
Query: 183 IETVKWNERGQVDIEDLKEKVKDAA--GVYVEIPNFFGLLEEEVREIGEIAHEAGAYFVV 240
I V + E G D+ +L+E +K++ + V+ PNFFG + E ++EIGE+ + FVV
Sbjct: 178 IVEVPYTEEGTTDLNNLEEVLKESEVHALAVQYPNFFGFV-EPLKEIGELCKKYEVPFVV 236
Query: 241 GVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIG 300
VDP L I++ P E GADIVVGE G P++FGGP G FA + + +R+MPGRL+G
Sbjct: 237 FVDPIALSILKPPAEFGADIVVGEGQQMGIPLSFGGPYVGFFATKKEH--VRKMPGRLVG 294
Query: 301 MTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEV 360
M +D EGKRAF + LQTREQHIRR +ATSNIC+N+ L+A+A +++ LG G++++
Sbjct: 295 MGEDIEGKRAFTLVLQTREQHIRRERATSNICTNQNLMALANLLYMVLLGKEGMKKVAVQ 354
Query: 361 ILKNTAYLKKRLSEVA-EIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYYVGKHFP 419
L Y KK L + E F G + + +R E K I+ +LLK I G + + +
Sbjct: 355 SLSKALYFKKELMKKGFEEVFTGKHLWEFPLRHES-LKAIYRKLLKEKIVLGLPLDRFYE 413
Query: 420 ELGESALFAATETTRKEWVDALISAL 445
+L + L A TE KE +D++++ L
Sbjct: 414 DLKNTTLIAVTEKRTKEEIDSVLALL 439
>gb|AAG19868.1| (AE005071) glycine dehydrogenase subunit 1; GcvP1 [Halobacterium
sp. NRC-1]
Length = 441
Score = 284 bits (719), Expect = 1e-75
Identities = 174/447 (38%), Positives = 251/447 (55%), Gaps = 21/447 (4%)
Query: 7 PNSAHKEEMLKEIGLSSIDELFADIPGKFIRDELNLPEGKSEYEVFLEMNEILGKNKTVL 66
P+ A + ML +G+ +DELF DIP + D + KSE + L N +
Sbjct: 9 PSEADTDAMLDAVGVDRVDELF-DIPPEVSFDGEFGIDAKSEQAALRGVRRRLSDNDDLT 67
Query: 67 EMPTFLGAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQSLIAELVGL 126
E FLG G Y HY+P+ V + +RSEF+T+YT YQPEI+QG LQ LFEYQSL+ EL GL
Sbjct: 68 E---FLGRGHYEHYVPSLVDSVSQRSEFITSYTQYQPEITQGFLQVLFEYQSLLVELTGL 124
Query: 127 PVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGPGVEIETV 186
V N SMYD TA+AEAAL+ R+ + +VP + VL Y G V +E
Sbjct: 125 GVANCSMYDAATALAEAALLAKRVRAADGNRVLVPGFVRDSHVDVLRNYTSGSDVVVERY 184
Query: 187 KWNERGQVDIEDLKEKV-KDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFVVGVDPT 245
+ G VD++ L+ + D VY E P G +EE++ +G++A A F +G DP
Sbjct: 185 A-TDAGNVDLDALEAAMDADVVMVYAENPTTCGTVEEQLCAVGDLADSHDALFCLGSDPV 243
Query: 246 ILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDA 305
+ I++ P ++GAD+VVG+AS G P ++ G G+FA R + +RQ+PGRL+G ++D
Sbjct: 244 AMSILQRPVDVGADVVVGDASVLGMPTSY-GTGLGVFATRKE--FLRQVPGRLVGASEDD 300
Query: 306 EGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVILKNT 365
G RAF +TLQTREQHIR+ +ATSNIC+N+A VA+ AAIH A LG G+ +L E +++
Sbjct: 301 AGTRAFTLTLQTREQHIRKERATSNICTNQAWVALRAAIHAAWLGADGLVDLAERMVELP 360
Query: 366 AYLKKRLSEV----AEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYYVGKHFPEL 421
L RL +V A + D + ++ R E+P + L+ G + V H
Sbjct: 361 RDLAARLDDVSGVTAPVHDDRHHIREFQARTEQPAPAV-ASALEAEGFGVHAVDDH---- 415
Query: 422 GESALFAATETTRKEWVDALISALREV 448
+ + DA ++A+REV
Sbjct: 416 ---TIQVCVTDANEHATDAFVAAVREV 439
>sp|O49954|GCSP_SOLTU GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN) >gi|7489225|pir||T07826
aminomethyltransferase (EC 2.1.2.10) precursor - potato
>gi|2894362|emb|CAB16918.1| (Z99770) P-Protein precursor
[Solanum tuberosum]
Length = 1035
Score = 247 bits (624), Expect = 2e-64
Identities = 156/389 (40%), Positives = 222/389 (56%), Gaps = 33/389 (8%)
Query: 8 NSAHKEEMLKEI---GLSSIDELF-ADIPGKFIRDELNLPE---GKSEYEVFLEMNEILG 60
NSA EE K G S+D L A +P + + LP+ G +E ++ M +
Sbjct: 81 NSATPEEQTKMAEFCGFQSLDALIDATVPQSIRSESMKLPKFDSGLTESQMIEHMQNLAS 140
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +++G G Y Y+P + + L+E + T YTPYQ EISQG L++L YQ++
Sbjct: 141 KNKV---FKSYIGMGYYNTYVPPVILRNLLENPAWYTQYTPYQAEISQGRLESLLNYQTM 197
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
I +L GLP+ NAS+ D GTA AEA M + +GK+K F++ + HP+ + + +T A G
Sbjct: 198 ITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKTFLIASNCHPQTIDICKTRADGF 257
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEI---AHEAGA 236
+++ TV D++D+ K D GV V+ P E E+ + GE AH G
Sbjct: 258 DLKVVTV--------DLKDIDYKSGDVCGVLVQYPG----TEGEILDYGEFIKNAHAHGV 305
Query: 237 YFVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPG 296
V+ D L +++ PGELGADIVVG A FG PM +GGP A A + K R MPG
Sbjct: 306 KVVMASDLLALTMLKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYK--RMMPG 363
Query: 297 RLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRE 356
R+IG++ D+ GK A M +QTREQHIRR KATSNIC+ +AL+A AA++ GP G++
Sbjct: 364 RIIGLSVDSTGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 423
Query: 357 LGEVI--LKNT--AYLKK-RLSEVAEIPF 380
+G+ + L T A LKK EV ++PF
Sbjct: 424 IGQRVHGLAGTFSAGLKKLGTVEVQDLPF 452
>pir||D83339 glycine cleavage system protein P2 PA2445 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9948493|gb|AAG05833.1|AE004672_1 (AE004672) glycine
cleavage system protein P2 [Pseudomonas aeruginosa]
Length = 959
Score = 237 bits (599), Expect = 2e-61
Identities = 146/393 (37%), Positives = 212/393 (53%), Gaps = 20/393 (5%)
Query: 1 MAKHYIPNSAHKEEMLKEIGLSSIDELFADIPGKFIRDE--LNLPEGKSEYEVFLEMNEI 58
+A+H P +A + ML+ +G S+D L ++ I+ L+LP G E E + I
Sbjct: 19 IARHIGPRAADTQAMLQRLGYDSLDTLIGNVIPDSIKGSSVLDLPAGMGEAEALASLKAI 78
Query: 59 LGKNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQ 117
+N+ + +F+G G Y + PA + + L+E + TAYTPYQPEISQG L+AL +Q
Sbjct: 79 AARNRA---LRSFIGQGYYNCHTPAPILRNLLENPAWYTAYTPYQPEISQGRLEALLNFQ 135
Query: 118 SLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKK-FIVPRHTHPERLQVLETYA 176
+L+++L GLP+ NASM D TA AEA RL + + + F RH HP+ L VL T A
Sbjct: 136 TLVSDLSGLPIANASMLDEATAAAEAMTFCKRLSKNRTSQAFFASRHCHPQTLDVLRTRA 195
Query: 177 KGPGVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGA 236
+ G+E+ V E E G ++ P G + + RE+ H A
Sbjct: 196 EPLGIEV---------VVGDESTIEDFSAYFGALLQYPTCDGEI-VDYRELVSRFHAVDA 245
Query: 237 YFVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPG 296
V D L ++ PGE GAD+ +G A FG P+ FGGP A FA R+ K R MPG
Sbjct: 246 LVAVAADLLALTLLTPPGEFGADVAIGSAQRFGVPLGFGGPHAAYFATRDAFK--RDMPG 303
Query: 297 RLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRE 356
RL+G++ D GK A+ + +QTREQHIRR KATSNIC+ + L+A A++ GP+G+
Sbjct: 304 RLVGVSIDRHGKPAYRLAMQTREQHIRREKATSNICTAQVLLANIASMFAVYHGPQGLLR 363
Query: 357 LGEVILKNTAYLKKRLSEVAEIPFDGVNFKDVL 389
+ + TA L L + + + +F D L
Sbjct: 364 IARRTHRLTAILAAGLERLG-VAVEQKHFFDTL 395
Score = 71.8 bits (173), Expect = 1e-11
Identities = 87/368 (23%), Positives = 148/368 (39%), Gaps = 54/368 (14%)
Query: 100 PYQP-EISQGMLQALFEYQSLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHR-----G 153
P+ P E S+G Q E ++++ G V+ + G+ A L+ +R +
Sbjct: 538 PFAPAEQSEGYRQLTDELEAMLCSATGYDAVSLQP-NAGSQGEYAGLLAIRAYHQSRGDS 596
Query: 154 KRKKFIVPRHTHPERLQVLETYAKGPGVEIETVKWNERGQVDIEDLKEKVKD----AAGV 209
+R ++P H A G+ + V + RG VD+EDL+ K + A +
Sbjct: 597 QRDICLIPSSAHGTN----PATASMVGMRVVVVACDARGNVDVEDLRNKASEHKERLAAL 652
Query: 210 YVEIPNFFGLLEEEVREIGEIAHEAGA-YFVVGVDPTILGIVEAPGELGADIV-VGEASY 267
+ P+ G+ EE +REI I H+ G ++ G + + + APG+ G D+ +
Sbjct: 653 MITYPSTHGVFEEAIREICAIVHDCGGQVYIDGANMNAMVGLCAPGKFGGDVSHLNLHKT 712
Query: 268 FGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAKA 327
F P GGP G VR L +PG G K+ A
Sbjct: 713 FCIPHGGGGPGVGPIGVR--AHLAPFLPGHARGERKEG---------------------A 749
Query: 328 TSNICSNEALVAVAAAIHIASLGPRGIRELGEVILKNTAYLKKRLSEVAEIPFDGVNFKD 387
S A + ++I +G G++ E+ + N Y+ RL E + + G N
Sbjct: 750 VSAAPYGSASILPITWMYIRMMGGEGLKRASEMAILNANYIAHRLEEHYPVLYAGGN--- 806
Query: 388 VLVRFE-----KPYKEIH----EELLKRNIHGGYYV-GKHFPELGESALFAATETTRKEW 437
LV E +P K+ +++ KR + G++ FP G + + TE+ K
Sbjct: 807 GLVAHECILDLRPLKDSSGISVDDVAKRLMDFGFHAPTMSFPVAG-TLMIEPTESESKAE 865
Query: 438 VDALISAL 445
+D A+
Sbjct: 866 LDRFCDAM 873
>gb|AAD56281.1|AF137264_1 (AF137264) glycine decarboxylase p protein [Anas platyrhynchos]
Length = 1024
Score = 237 bits (599), Expect = 2e-61
Identities = 148/414 (35%), Positives = 224/414 (53%), Gaps = 19/414 (4%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELFAD-IPGKF-IRDELNLPEGKSEYEVFLEMNEILG 60
+H P K EML+ +G+ S++EL IPG +R L + + E E+ + I
Sbjct: 70 RHIGPREGEKREMLRALGVQSVEELMDKAIPGSIRLRRPLRMEDPVGENEILETLYNIAS 129
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +++G G Y +P + + L+E + ++T YTPYQPE+SQG L++L YQ++
Sbjct: 130 KNKI---WRSYIGMGYYNCSVPQPIARNLLENAGWVTQYTPYQPEVSQGRLESLLNYQTM 186
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
+ ++ G+ V NAS+ D GTA AEA + R KR+KF V HP+ + V++T A
Sbjct: 187 VCDITGMDVANASLLDEGTAAAEAMQLCHR--HNKRRKFYVDSRCHPQTIAVVQTRANYT 244
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
GV E +E + KD +GV + P+ G +E+ E+ E AH+ G
Sbjct: 245 GVITELKLPHE--------MDFSGKDVSGVLFQYPDTEGKVED-FSELVERAHQNGTLAC 295
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLI 299
D L I++ PGE G D+V+G + FG P+ +GGP A FAV+ + L+R MPGR++
Sbjct: 296 CATDLLALCILKPPGEFGVDVVLGSSQRFGVPLCYGGPHAAFFAVKEN--LVRMMPGRMV 353
Query: 300 GMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGE 359
G+T+DA GK + + LQTREQHIRR KATSNIC+ +AL+A AA+ G G+R++
Sbjct: 354 GVTRDANGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMFGVYHGSDGLRDIAR 413
Query: 360 VILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYY 413
+ T L + L + F + V KE+ + R I+ Y
Sbjct: 414 RVHNATLILAEGLRRAGHKLHHDLFFDTLTVTCGCSVKEVLDRAALRKINFRIY 467
>sp|P23378|GCSP_HUMAN GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN) >gi|87570|pir||JN0124 glycine dehydrogenase
(decarboxylating) (EC 1.4.4.2) - human
>gi|190287|gb|AAA36478.1| (M63635) glycine decarboxylase
[Homo sapiens]
Length = 1020
Score = 236 bits (596), Expect = 4e-61
Identities = 148/403 (36%), Positives = 222/403 (54%), Gaps = 30/403 (7%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELFAD-IPGKF-IRDELNLPEGKSEYEVFLEMNEILG 60
+H P + EML+ +GL+SIDEL +P ++ L + + E E+ ++ I
Sbjct: 66 RHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCENEILATLHAISS 125
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KN+ +++G G Y +P + + L+E S ++T YTPYQPE+SQG L++L YQ++
Sbjct: 126 KNQI---WRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRLESLLNYQTM 182
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
+ ++ GL + NAS+ D GTA AEA + R KR+KF+V HP+ + V++T AK
Sbjct: 183 VCDITGLDMANASLLDEGTAAAEALQLCYR--HNKRRKFLVDPRCHPQTIAVVQTRAKYT 240
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
GV E E + KD +GV + P+ G +E+ E+ E AH++G+
Sbjct: 241 GVLTELKLPCE--------MDFSGKDVSGVLFQYPDTEGKVED-FTELVERAHQSGSLAC 291
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLI 299
D L I+ PGE G DI +G + FG P+ +GGP A FAVR L+R MPGR++
Sbjct: 292 CATDLLALCILRPPGEFGVDIALGSSQRFGVPLGYGGPHAAFFAVRES--LVRMMPGRMV 349
Query: 300 GMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGE 359
G+T+DA GK + + LQTREQHIRR KATSNIC+ +AL+A AA+ G G+ +
Sbjct: 350 GVTRDATGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMFAIYHGSHGLEHIAR 409
Query: 360 VILKNTAYLKKRLSEVA-----EIPFD------GVNFKDVLVR 391
+ T L + L ++ FD G + K+VL R
Sbjct: 410 RVHNATLILSEGLKRAGHQLQHDLFFDTLKIHCGCSVKEVLGR 452
>pir||T16734 hypothetical protein R12C12.1 - Caenorhabditis elegans
>gi|746454|gb|AAC46780.1| (U23510) similar to glycine
dehydrogenase [Caenorhabditis elegans]
Length = 979
Score = 236 bits (596), Expect = 4e-61
Identities = 148/376 (39%), Positives = 216/376 (57%), Gaps = 20/376 (5%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELFADIPGKFIRDE--LNLPEGKSEYEVFLEMNEILG 60
+H P +++ML IG +D+L I+ E L LP EY++ E+ I
Sbjct: 33 RHIGPRRLEQQQMLDFIGYKDLDDLTGTNVPNMIKAEKALELPAPLDEYKMLKELEAIAA 92
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
+NK +++G G Y +PA + + +++ +++ YTPYQ EISQG L++L +Q++
Sbjct: 93 QNKIYR---SYIGMGYYDTIVPAVISRNILQNIGWISQYTPYQAEISQGRLESLLNFQTM 149
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
IAE+ GLP NAS+ D TA AEA + R KR K +V HP+ L V+ T +
Sbjct: 150 IAEMTGLPTTNASLLDEATASAEAVALAARTT--KRNKIVVDSFCHPQNLDVIRTRSGPL 207
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
G++IE E D +KV A V V+ PN G + + E+ E AH+ + +
Sbjct: 208 GIDIEVSDSIEGYAFD-----DKV---AAVVVQYPNTEGRIHQ-FDELIESAHKNKSLVI 258
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAV-RNDMK--LIRQMPG 296
+ D L I+ +PG+LGADI VG A FG P+ +GGP AG AV ++D K L R +PG
Sbjct: 259 MVCDLLSLTILRSPGDLGADIAVGSAQRFGVPLGYGGPHAGFMAVAKHDAKNALGRNIPG 318
Query: 297 RLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRE 356
R+IG+TKDA G RA + LQTREQHIRR KATSNIC+ +AL+A +A++ GP+ + E
Sbjct: 319 RIIGVTKDANGNRALRLALQTREQHIRRDKATSNICTAQALLANMSAMYAVYHGPQRLTE 378
Query: 357 LGEVILKNTAYLKKRL 372
+ + K+TAYL L
Sbjct: 379 IARGVHKSTAYLAYHL 394
>gi|4504013 glycine dehydrogenase (decarboxylating; glycine decarboxylase,
glycine cleavage system protein P) [Homo sapiens]
>gi|87571|pir||B39521 glycine dehydrogenase
(decarboxylating) (EC 1.4.4.2) precursor - human
>gi|190209|gb|AAA36463.1| (M64590) glycine decarboxylase
[Homo sapiens] >gi|219660|dbj|BAA14286.1| (D90239)
glycine decarboxylase precursor [Homo sapiens]
Length = 1020
Score = 235 bits (594), Expect = 6e-61
Identities = 148/403 (36%), Positives = 222/403 (54%), Gaps = 30/403 (7%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELFAD-IPGKF-IRDELNLPEGKSEYEVFLEMNEILG 60
+H P + EML+ +GL+SIDEL +P ++ L + + E E+ ++ I
Sbjct: 66 RHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCENEILATLHAISS 125
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KN+ +++G G Y +P + + L+E S ++T YTPYQPE+SQG L++L YQ++
Sbjct: 126 KNQI---WRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRLESLLNYQTM 182
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
+ ++ GL + NAS+ D GTA AEA + R KR+KF+V HP+ + V++T AK
Sbjct: 183 VCDITGLDMANASLLDEGTAAAEALQLCYR--HNKRRKFLVDPRCHPQTIAVVQTRAKYT 240
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
GV E E + KD +GV + P+ G +E+ E+ E AH++G+
Sbjct: 241 GVLTELKLPCE--------MDFSGKDVSGVLFQYPDTEGKVED-FTELVERAHQSGSLAC 291
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLI 299
D L I+ PGE G DI +G + FG P+ +GGP A FAVR L+R MPGR++
Sbjct: 292 CATDLLALCILRPPGEFGVDIALGSSQRFGVPLGYGGPHAAFFAVRES--LVRMMPGRMV 349
Query: 300 GMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGE 359
G+T+DA GK + + LQTREQHIRR KATSNIC+ +AL+A AA+ G G+ +
Sbjct: 350 GVTRDATGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMFRIYHGSHGLEHIAR 409
Query: 360 VILKNTAYLKKRLSEVA-----EIPFD------GVNFKDVLVR 391
+ T L + L ++ FD G + K+VL R
Sbjct: 410 RVHNATLILSEGLKRAGHQLQHDLFFDTLKIHCGCSVKEVLGR 452
>pir||T05309 probable glycine dehydrogenase (decarboxylating) (EC 1.4.4.2)
F26P21.130 - Arabidopsis thaliana
>gi|3688182|emb|CAA21210.1| (AL031804) P-Protein-like
protein [Arabidopsis thaliana]
>gi|7270248|emb|CAB80018.1| (AL161582) P-Protein-like
protein [Arabidopsis thaliana]
Length = 1037
Score = 235 bits (594), Expect = 6e-61
Identities = 149/396 (37%), Positives = 219/396 (54%), Gaps = 34/396 (8%)
Query: 8 NSAHKEE---MLKEIGLSSIDELF-ADIPGKFIRDELNLPE---GKSEYEVFLEMNEILG 60
NSA +E M K G ID L A +P D + + G +E ++ M ++
Sbjct: 84 NSATPDEQTHMAKFCGFDHIDSLIDATVPKSIRLDSMKFSKFDAGLTESQMIQHMVDLAS 143
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +F+G G Y ++P + + ++E + T YTPYQ EISQG L++L +Q++
Sbjct: 144 KNKV---FKSFIGMGYYNTHVPTVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTV 200
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
I +L GLP+ NAS+ D GTA AEA M + +GK+K F++ + HP+ + V +T A G
Sbjct: 201 ITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKTFVIASNCHPQTIDVCKTRADGF 260
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEI---AHEAGA 236
+++ T D++D+ D GV V+ P E EV + E AH G
Sbjct: 261 DLKVVT--------SDLKDIDYSSGDVCGVLVQYPG----TEGEVLDYAEFVKNAHANGV 308
Query: 237 YFVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPG 296
V+ D L +++ PGE GADIVVG A FG PM +GGP A A + K R MPG
Sbjct: 309 KVVMATDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYK--RMMPG 366
Query: 297 RLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRE 356
R+IG++ D+ GK+A M +QTREQHIRR KATSNIC+ +AL+A AA++ GP G++
Sbjct: 367 RIIGISVDSSGKQALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPAGLKS 426
Query: 357 LGEVI-----LKNTAYLKKRLSEVAEIP-FDGVNFK 386
+ + + + + K ++EV E+P FD V K
Sbjct: 427 IAQRVHGLAGIFSLGLNKLGVAEVQELPFFDTVKIK 462
>sp|O49850|GCSP_FLAAN GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN) >gi|2894358|emb|CAB16911.1| (Z99762)
P-protein [Flaveria anomala]
Length = 1034
Score = 235 bits (593), Expect = 8e-61
Identities = 149/410 (36%), Positives = 220/410 (53%), Gaps = 22/410 (5%)
Query: 8 NSAHKEEMLKE---IGLSSIDELF-ADIPGKFIRDELN---LPEGKSEYEVFLEMNEILG 60
NSA EE K +G S++D L A +P D + EG +E ++ M ++
Sbjct: 80 NSATPEEQTKMAEFVGFSNLDSLIDATVPKSIRLDSMKYSKFDEGLTESQMIAHMQDLAS 139
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +F+G G Y +P + + ++E + T YTPYQ EI+QG L++L +Q++
Sbjct: 140 KNKI---FKSFIGMGYYNTSVPTVILRNIMENPGWYTQYTPYQAEIAQGRLESLLNFQTM 196
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
I +L GLP+ NAS+ D GTA AEA M + +GK+K FI+ + HP+ + + +T A G
Sbjct: 197 ITDLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGF 256
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
+++ T D++D D GV V+ P G L + E + AH G V
Sbjct: 257 DLKVVT--------SDLKDFDYSSGDVCGVLVQYPGTEGEL-LDYSEFIKNAHANGVKVV 307
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLI 299
+ D L I++ PGELGADIVVG A FG PM +GGP A A + K R MPGR+I
Sbjct: 308 MASDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYK--RMMPGRII 365
Query: 300 GMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGE 359
G++ D+ GK A M +QTREQHIRR KATSNIC+ +AL+A AA++ GP G++ + +
Sbjct: 366 GVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYGVYHGPEGLKTIAK 425
Query: 360 VILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIH 409
+ L ++ + + F D + K I EE K ++
Sbjct: 426 RVHGLAGTFAAGLKKLGTVQVQDLPFFDTVKVTCADSKAIAEEACKHKMN 475
>sp|O49852|GCSP_FLATR GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN) >gi|2894360|emb|CAB16916.1| (Z99767)
P-Protein precursor [Flaveria trinervia]
Length = 1034
Score = 235 bits (592), Expect = 1e-60
Identities = 149/410 (36%), Positives = 220/410 (53%), Gaps = 22/410 (5%)
Query: 8 NSAHKEEMLKE---IGLSSIDELF-ADIPGKFIRDELN---LPEGKSEYEVFLEMNEILG 60
NSA EE K +G S++D L A +P D + EG +E ++ M ++
Sbjct: 80 NSATPEEQTKMAEFVGFSNLDSLIDATVPKAIRLDSMKYSKFDEGLTESQMIAHMQDLAS 139
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +F+G G Y +P + + ++E + T YTPYQ EI+QG L++L +Q++
Sbjct: 140 KNKI---FKSFIGMGYYNTSVPTVILRNIMENPGWYTQYTPYQAEIAQGRLESLLNFQTM 196
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
I +L GLP+ NAS+ D GTA AEA M + +GK+K FI+ + HP+ + + +T A G
Sbjct: 197 ITDLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGF 256
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
+++ T D++D D GV V+ P G L + E + AH G V
Sbjct: 257 DLKVVT--------SDLKDFDYSSGDVCGVLVQYPGTEGEL-LDYSEFIKNAHANGVKVV 307
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLI 299
+ D L I++ PGELGADIVVG A FG PM +GGP A A + K R MPGR+I
Sbjct: 308 MASDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYK--RMMPGRII 365
Query: 300 GMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGE 359
G++ D+ GK A M +QTREQHIRR KATSNIC+ +AL+A AA++ GP G++ + +
Sbjct: 366 GVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYGVYHGPEGLKTIAK 425
Query: 360 VILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIH 409
+ L ++ + + F D + K I EE K ++
Sbjct: 426 RVHGLAGTFAAGLKKLGTVQVQDLPFFDTVKVTCADSKAIAEEAYKHKMN 475
>sp|Q09785|GCSP_SCHPO PUTATIVE GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL
PRECURSOR (GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE
SYSTEM P-PROTEIN) >gi|2130270|pir||S62435 probable
glycine dehydrogenase (decarboxylating) - fission yeast
(Schizosaccharomyces pombe) >gi|7492605|pir||T37641
probable glycine dehydrogenase (decarboxylating) -
fission yeast (Schizosaccharomyces pombe)
>gi|1008991|emb|CAA91099.1| (Z54308) putative glycine
dehydrogenase (decarboxylating) [Schizosaccharomyces
pombe]
Length = 1017
Score = 234 bits (591), Expect = 1e-60
Identities = 139/385 (36%), Positives = 209/385 (54%), Gaps = 27/385 (7%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELFADIPGKFIR--------------DELNLPEGKSE 48
+H P+ ++ L+ +G D D+ +R +E N P SE
Sbjct: 52 RHIGPSKTDQQYQLESLGYKDFDSFLKDVIPDSVRTPESQLMAFGSVNPNEKNPPVNYSE 111
Query: 49 YEVFLEMNEILGKNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQ 107
E N + +NK + +F+G G Y +PA + + ++E E+ T YTPYQ EISQ
Sbjct: 112 SEFTTLANNVANQNKLI---KSFIGMGYYNVKLPAAIQRNVLENPEWYTQYTPYQAEISQ 168
Query: 108 GMLQALFEYQSLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPE 167
G L+++ YQ++IA+L GL + NAS+ D GTA EA +M + + KRK F+V ++ +P
Sbjct: 169 GRLESMMNYQTMIADLTGLSISNASLLDEGTAAGEAMVMLMANDKKKRKTFLVDKNIYPN 228
Query: 168 RLQVLETYAKGPGVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREI 227
L VL T A G G++IE + E + + K G++V+ P G + + +
Sbjct: 229 TLSVLRTRASGFGIKIEL------DNITPELITKSAKHVFGIFVQYPAADGSI-FDYGHL 281
Query: 228 GEIAHEAGAYFVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRND 287
A + V D L I+++PGE GAD+ VG FG PM +GGP AG FA +
Sbjct: 282 AATARSFNMHVVAATDLLALTILKSPGEWGADVAVGSTQRFGLPMGYGGPHAGFFACSEE 341
Query: 288 MKLIRQMPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIA 347
K R++PGRLIG++KD A+ + LQTREQHIRR KATSNIC+ +AL+A +A +
Sbjct: 342 FK--RKIPGRLIGLSKDRLENPAYRLALQTREQHIRREKATSNICTAQALLANMSAFYAI 399
Query: 348 SLGPRGIRELGEVILKNTAYLKKRL 372
GP G++E+ I +T++LK L
Sbjct: 400 YHGPNGLQEIANRIYASTSFLKSAL 424
>sp|P49362|GCSB_FLAPR GLYCINE DEHYDROGENASE [DECARBOXYLATING] B, MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE B) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN B) >gi|2130012|pir||S63536
aminomethyltransferase (EC 2.1.2.10) gdcsPB precursor -
Flaveria pringlei >gi|1000489|emb|CAA91000.1| (Z54239)
P-protein precursor of glycine cleavage system [Flaveria
pringlei]
Length = 1034
Score = 232 bits (586), Expect = 6e-60
Identities = 148/410 (36%), Positives = 218/410 (53%), Gaps = 22/410 (5%)
Query: 8 NSAHKEEMLKE---IGLSSIDELF-ADIPGKFIRDELN---LPEGKSEYEVFLEMNEILG 60
NSA EE K +G ++D L A +P D + EG +E ++ M ++
Sbjct: 80 NSATPEEQTKMAEFVGFPNLDSLIDATVPKSIRLDSMKYSKFDEGLTESQMIAHMQDLAS 139
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +F+G G Y +P + + ++E + T YTPYQ EI+QG L++L +Q++
Sbjct: 140 KNKI---FKSFIGMGYYNTSVPTVILRNIMENPGWYTQYTPYQAEIAQGRLESLLNFQTM 196
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
I +L GLP+ NAS+ D GTA AEA M + +GK+K FI+ + HP+ + + +T A G
Sbjct: 197 ITDLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGF 256
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
+++ T D++D D GV V+ P G L + E + AH G V
Sbjct: 257 DLKVVT--------SDLKDFDYSSGDVCGVLVQYPGTEGEL-LDYSEFIKNAHANGVKVV 307
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLI 299
+ D L I++ PGELGADIVVG A FG PM +GGP A A + K R MPGR+I
Sbjct: 308 MASDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYK--RMMPGRII 365
Query: 300 GMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGE 359
G++ D+ GK A M +QTREQHIRR KATSNIC+ +AL+A AA+ GP G++ + +
Sbjct: 366 GVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMFGVYHGPEGLKTIAK 425
Query: 360 VILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIH 409
+ L ++ + + F D + K I EE K ++
Sbjct: 426 RVHGLAGTFASGLKKLGTVQVQDLPFFDTVKVTCADSKAIAEEAYKHKMN 475
>pir||T02615 probable glycine dehydrogenase (decarboxylating) (EC 1.4.4.2)
T19L18.11 - Arabidopsis thaliana
>gi|3413705|gb|AAC31228.1| (AC004747) putative glycine
dehydrogenase [Arabidopsis thaliana]
Length = 1044
Score = 232 bits (586), Expect = 6e-60
Identities = 142/364 (39%), Positives = 204/364 (56%), Gaps = 29/364 (7%)
Query: 8 NSAHKEE---MLKEIGLSSIDELFADIPGKFIR-DELNLP----EGKSEYEVFLEMNEIL 59
NSA +E M G +++ L K IR D + EG +E ++ M+++
Sbjct: 89 NSATPDEQAQMANYCGFDNLNTLIDSTVPKSIRLDSMKFSGIFDEGLTESQMIEHMSDLA 148
Query: 60 GKNKTVLEMPTFLGAGTY-FHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQS 118
KNK +F+G G Y H P ++ ++E + T YTPYQ EISQG L++L YQ+
Sbjct: 149 SKNKV---FKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNYQT 205
Query: 119 LIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKG 178
+I +L GLP+ NAS+ D GTA AEA M + +GK+K F++ + HP+ + V +T A G
Sbjct: 206 VITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKTFVIASNCHPQTIDVCKTRADG 265
Query: 179 PGVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEI---AHEAG 235
+++ T VDI+D+ D GV V+ P E EV + GE AH G
Sbjct: 266 FDLKVVT--------VDIKDVDYSSGDVCGVLVQYPG----TEGEVLDYGEFVKNAHANG 313
Query: 236 AYFVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMP 295
V+ D L +++ PGE GADIVVG FG PM +GGP A A + K R MP
Sbjct: 314 VKVVMATDLLALTMLKPPGEFGADIVVGSGQRFGVPMGYGGPHAAFLATSQEYK--RMMP 371
Query: 296 GRLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIR 355
GR+IG++ D+ GK+A M +QTREQHIRR KATSNIC+ +AL+A A++ GP G++
Sbjct: 372 GRIIGVSVDSSGKQALRMAMQTREQHIRRDKATSNICTAQALLANMTAMYAVYHGPEGLK 431
Query: 356 ELGE 359
+ +
Sbjct: 432 SIAQ 435
>sp|P26969|GCSP_PEA GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN) >gi|282926|pir||A42109 glycine dehydrogenase
(decarboxylating) (EC 1.4.4.2) component P precursor -
garden pea >gi|20741|emb|CAA42443.1| (X59773) component
of aminomethyltransferase [Pisum sativum]
Length = 1057
Score = 231 bits (584), Expect = 9e-60
Identities = 141/363 (38%), Positives = 207/363 (56%), Gaps = 28/363 (7%)
Query: 8 NSAHKEE---MLKEIGLSSIDELF-ADIPGKFIRDELNLPE---GKSEYEVFLEMNEILG 60
NSA +E M + +G ++D L A +P E+ + G +E ++ M ++
Sbjct: 103 NSATPDEQTKMAESVGFDTLDSLVDATVPKSIRLKEMKFNKFDGGLTEGQMIEHMKDLAS 162
Query: 61 KNKTVLEMPTFLGAGTY-FHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +F+G G Y H P ++ ++E + T YTPYQ EISQG L++L +Q++
Sbjct: 163 KNKV---FKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTM 219
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
I +L GLP+ NAS+ D GTA AEA M + +GK+K FI+ + HP+ + + +T A G
Sbjct: 220 ITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICQTRADGF 279
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEI---AHEAGA 236
+++ VK D++D+ K D GV V+ P E EV + GE AH
Sbjct: 280 ELKV-VVK-------DLKDIDYKSGDVCGVLVQYPG----TEGEVLDYGEFIKKAHANEV 327
Query: 237 YFVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPG 296
V+ D L +++ PGE GADIVVG A FG PM +GGP A A + K R MPG
Sbjct: 328 KVVMASDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYK--RMMPG 385
Query: 297 RLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRE 356
R+IG++ D+ GK+A M +QTREQHIRR KATSNIC+ +AL+A AA++ GP G++
Sbjct: 386 RIIGVSVDSSGKQALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKA 445
Query: 357 LGE 359
+ +
Sbjct: 446 IAQ 448
>pir||S40216 P protein - Flaveria pringlei >gi|438003|emb|CAA81076.1| (Z25857) P
protein [Flaveria pringlei]
Length = 1037
Score = 231 bits (583), Expect = 1e-59
Identities = 147/410 (35%), Positives = 218/410 (52%), Gaps = 22/410 (5%)
Query: 8 NSAHKEEMLKE---IGLSSIDELF-ADIPGKFIRDELN---LPEGKSEYEVFLEMNEILG 60
NSA EE K +G ++D L A +P D + EG +E ++ M ++
Sbjct: 83 NSATPEEQTKMAEFVGFPNLDSLIDATVPKSIRLDSMKYSKFDEGLTESQMIAHMQDLAS 142
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +F+G G Y +P + + ++E + T YTPYQ EI+QG L++L +Q++
Sbjct: 143 KNKI---FKSFIGMGYYNTSVPTVILRNIMENPGWYTQYTPYQAEIAQGRLESLLNFQTM 199
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
+ +L GLP+ NAS+ D GTA AEA M + +GK+K FI+ + HP+ + + +T A G
Sbjct: 200 VTDLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGF 259
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
+++ T D++D D GV V+ P G L + E + AH G V
Sbjct: 260 DLKVVT--------SDLKDFDYSSGDVCGVLVQYPGTEGEL-LDYSEFIKNAHANGVKVV 310
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLI 299
+ D L I++ PGELGADIVVG A FG PM +GGP A A + K R MPGR+I
Sbjct: 311 MASDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYK--RMMPGRII 368
Query: 300 GMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGE 359
G++ D+ GK A M +QTREQHIRR KATSNIC+ +AL+A AA+ GP G++ + +
Sbjct: 369 GVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMFGVYHGPEGLKTIAK 428
Query: 360 VILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIH 409
+ L ++ + + F D + K I EE K ++
Sbjct: 429 RVHGLAGTFAAGLKKLGTVQVQDLPFFDTVKVTCVDSKAIAEEAYKHKMN 478
>sp|P49361|GCSA_FLAPR GLYCINE DEHYDROGENASE [DECARBOXYLATING] A, MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE A) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN A) >gi|2130011|pir||S63535
aminomethyltransferase (EC 2.1.2.10) gdcsPA precursor -
Flaveria pringlei >gi|608712|emb|CAA85353.1| (Z36879)
P-protein of the glycine cleavage system [Flaveria
pringlei]
Length = 1037
Score = 231 bits (583), Expect = 1e-59
Identities = 147/410 (35%), Positives = 218/410 (52%), Gaps = 22/410 (5%)
Query: 8 NSAHKEEMLKE---IGLSSIDELF-ADIPGKFIRDELN---LPEGKSEYEVFLEMNEILG 60
NSA EE K +G ++D L A +P D + EG +E ++ M ++
Sbjct: 83 NSATPEEQTKMAEFVGFPNLDSLIDATVPKSIRLDSMKYSKFDEGLTESQMIAHMQDLAS 142
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +F+G G Y +P + + ++E + T YTPYQ EI+QG L++L +Q++
Sbjct: 143 KNKI---FKSFIGMGYYNTSVPTVILRNIMENPGWYTQYTPYQAEIAQGRLESLLNFQTM 199
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
+ +L GLP+ NAS+ D GTA AEA M + +GK+K FI+ + HP+ + + +T A G
Sbjct: 200 VTDLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGF 259
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
+++ T D++D D GV V+ P G L + E + AH G V
Sbjct: 260 DLKVVT--------SDLKDFDYSSGDVCGVLVQYPGTEGEL-LDYSEFIKNAHANGVKVV 310
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLI 299
+ D L I++ PGELGADIVVG A FG PM +GGP A A + K R MPGR+I
Sbjct: 311 MASDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYK--RMMPGRII 368
Query: 300 GMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGE 359
G++ D+ GK A M +QTREQHIRR KATSNIC+ +AL+A AA+ GP G++ + +
Sbjct: 369 GVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMFGVYHGPEGLKTIAK 428
Query: 360 VILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIH 409
+ L ++ + + F D + K I EE K ++
Sbjct: 429 RVHGLAGTFAAGLKKLGTVQVQDLPFFDTVKVTCVDSKAIAEEAYKHKMN 478
>gi|6323843 Glycine decarboxylase complex (P-subunit), glycine synthase
(P-subunit), Glycine cleavage system (P-subunit); Gcv2p
[Saccharomyces cerevisiae]
>gi|1346120|sp|P49095|GCSP_YEAST GLYCINE DEHYDROGENASE
[DECARBOXYLATING], MITOCHONDRIAL PRECURSOR (GLYCINE
DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM P-PROTEIN)
>gi|1078211|pir||S50917 aminomethyltransferase (EC
2.1.2.10) - yeast (Saccharomyces cerevisiae)
>gi|642281|emb|CAA87810.1| (Z47815) putative glycine
dehydrogenase [Saccharomyces cerevisiae]
>gi|676871|gb|AAB18933.1| (U20641) glycine decarboxylase
[Saccharomyces cerevisiae] >gi|1589242|prf||2210375A Gly
decarboxylase:SUBUNIT=P [Saccharomyces cerevisiae]
Length = 1034
Score = 228 bits (576), Expect = 8e-59
Identities = 138/379 (36%), Positives = 216/379 (56%), Gaps = 25/379 (6%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELFADI--PGKFIRDELNLP---EGKSEYEVFLEMNE 57
+H P+ + ++MLK +G S ++ ++ P R L L +G E E+ + +
Sbjct: 70 RHLGPSPSDVKKMLKTMGYSDLNAFIEELVPPNILKRRPLKLEAPSKGFCEQEMLQHLEK 129
Query: 58 ILGKNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEY 116
I KN ++ F+G G Y +P + + L+E E+ T+YTPYQPEISQG L+AL +
Sbjct: 130 IANKNH--YKVKNFIGKGYYGTILPPVIQRNLLESPEWYTSYTPYQPEISQGRLEALLNF 187
Query: 117 QSLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYA 176
Q+++++L GLPV NAS+ D GTA EA L++ + R K+ K+++ + H + VL T A
Sbjct: 188 QTVVSDLTGLPVANASLLDEGTAAGEAMLLSFNISRKKKLKYVIDKKLHQQTKSVLHTRA 247
Query: 177 KGPGVEIETVKWNERGQVDIEDLKEKV-----KDAAGVYVEIPNFFG--LLEEEVREIGE 229
K +EI +VD D+K+ V D +G V+ P G L + ++++ +
Sbjct: 248 KPFNIEII--------EVDCSDIKKAVDVLKNPDVSGCLVQYPATDGSILPPDSMKQLSD 299
Query: 230 IAHEAGAYFVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMK 289
H + V D L +++ P GADIV+G + FG PM +GGP A FAV + K
Sbjct: 300 ALHSHKSLLSVASDLMALTLLKPPAHYGADIVLGSSQRFGVPMGYGGPHAAFFAVID--K 357
Query: 290 LIRQMPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASL 349
L R++PGR++G++KD GK A + LQTREQHI+R KATSNIC+ +AL+A A+ +
Sbjct: 358 LNRKIPGRIVGISKDRLGKTALRLALQTREQHIKRDKATSNICTAQALLANVASSYCVYH 417
Query: 350 GPRGIRELGEVILKNTAYL 368
GP+G++ + I T+ L
Sbjct: 418 GPKGLQNISRRIFSLTSIL 436
>pir||T44754 probable glycine dehydrogenase (decarboxylating) (EC 1.4.4.2)
[imported] - Mycobacterium leprae
>gi|2578379|emb|CAA15464.1| (AL008609) glycine
dehydrogenase (decarboxylating) [Mycobacterium leprae]
Length = 952
Score = 226 bits (570), Expect = 4e-58
Identities = 156/456 (34%), Positives = 222/456 (48%), Gaps = 37/456 (8%)
Query: 2 AKHYIPNSAHKEEMLKEIGLSSIDELFADIPGKFIRDELN----------LPEGKSEYEV 51
A+H PNS ML IG+ S+D+L A I D + LP +E E
Sbjct: 15 ARHIGPNSEDVATMLAVIGVESLDDLAAKAVPSDILDNVTDTGVAPGLDRLPPPATESET 74
Query: 52 FLEMNEILGKNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGML 110
E+ + N + M +G G Y PA + + ++E + T YTPYQPEISQG L
Sbjct: 75 LAELGALARANTVAVSM---IGQGYYDTLTPAVLSRNILENPAWYTPYTPYQPEISQGRL 131
Query: 111 QALFEYQSLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQ 170
+AL +Q+L+++L GL + NASM D GTA AEA + R R + +V + +
Sbjct: 132 EALLNFQTLVSDLTGLEIANASMLDEGTAAAEAMTLMYRAARSTASRVVVDVDVFAQTVA 191
Query: 171 VLETYAKGPGVEIETVKWNERGQVDIEDLKEKVKDAA--GVYVEIPNFFGLLEEEVREIG 228
V T AK G++I + DL+E + D GV ++P G + + I
Sbjct: 192 VFATRAKPLGIDIV-----------VADLREGLPDGEFFGVITQLPGASGRITDWTALIA 240
Query: 229 EIAHEAGAYFVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDM 288
+ AH GA VG D L ++ PGE+GAD+ G FG PM FGGP AG A+
Sbjct: 241 Q-AHSRGALVAVGADLLALTLITPPGEIGADVAFGTTQRFGVPMGFGGPHAGYLALHT-- 297
Query: 289 KLIRQMPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIAS 348
K RQ+PGRL+G++ D++G A+ + LQTREQHIRR KATSNIC+ + L+AV AA++ +
Sbjct: 298 KHARQLPGRLVGVSVDSDGTPAYRLALQTREQHIRRDKATSNICTAQVLLAVMAAMYASY 357
Query: 349 LGPRGIRELGEVILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNI 408
G G+ + + L LS F VL R +I +R I
Sbjct: 358 HGAEGLTGIARRVHAQARALAAGLSAAGVEVVHQAFFDTVLARVPGRTVQIQGAAKERGI 417
Query: 409 HGGYYVGKHFPELGESALFAATETTRKEWVDALISA 444
+ G H A E T E + A+++A
Sbjct: 418 NVWLVDGDH-------VSVACDEATTDEHITAVLAA 446
>pir||E75352 glycine cleavage system P protein - Deinococcus radiodurans
(strain R1) >gi|6459582|gb|AAF11360.1|AE002021_9
(AE002021) glycine cleavage system P protein
[Deinococcus radiodurans]
Length = 949
Score = 225 bits (568), Expect = 7e-58
Identities = 148/391 (37%), Positives = 206/391 (51%), Gaps = 23/391 (5%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELF-ADIPGKFIRD-ELNLPEGKSEYEVFLEMNEILG 60
+H P+ A + EML +G+SS+DEL +P D EL+ G +E + E+ +
Sbjct: 17 RHIGPSEAEQAEMLGVLGVSSLDELTQTTLPAAIQFDGELHTGPGMTEAQALAELKAVAQ 76
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQSLI 120
KNK AGT P ++ ++E + TAYTPYQ EISQG L+ L +Q +
Sbjct: 77 KNKVFRSYIGMGYAGT--DVPPVILRNMLENPGWYTAYTPYQAEISQGRLEMLLNFQQTV 134
Query: 121 AELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKK-FIVPRHTHPERLQVLETYAKGP 179
++ G+PV NAS+ D TA AEA + R + K F V + HP+ + V++T A+
Sbjct: 135 QDMTGMPVSNASLLDEATAAAEAMTLAKRQSKNKGSNVFFVADNVHPQTMDVVKTRAEYF 194
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
G E++T G D + A G V+ P G + + I E AH GA +
Sbjct: 195 GFEVQT------GSADAIP-----EGAFGALVQYPGTHGEVLN-LAPIAEKAHTQGAALI 242
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLI 299
V D ++ PGE GADIVVG A FG PM FGGP A A + + R MPGR+I
Sbjct: 243 VATDLLACALLTPPGEQGADIVVGSAQRFGVPMGFGGPHAAFLACQKGFE--RSMPGRVI 300
Query: 300 GMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGE 359
G++KD G A M +QTREQHIRR KATSNIC+ +AL+A AA + GP GI+ + E
Sbjct: 301 GVSKDVRGNTALRMAMQTREQHIRREKATSNICTAQALLANMAAAYAVWHGPEGIKTIAE 360
Query: 360 VILKNTAYLKKRLSEVA----EIPFDGVNFK 386
+ + T L K L + E FD + F+
Sbjct: 361 RVHRLTGILAKALQDAGIKANETFFDTLTFE 391
Score = 80.0 bits (194), Expect = 5e-14
Identities = 95/376 (25%), Positives = 162/376 (42%), Gaps = 57/376 (15%)
Query: 100 PYQPEI-SQGMLQALFEYQSLIAELVGLPVVNASMYDWGTAMAE-AALMTVRLH---RGK 154
P+ PE +QG + L E + +A++ G V SM A E A L+ +R + RG+
Sbjct: 524 PFAPESQTQGYAEMLAELERWLADITGYDAV--SMQPNSGAQGEYAGLLVIRKYHEARGE 581
Query: 155 --RKKFIVPRHTHPERLQVLETYAKGPGVEIETVKWNERGQVDIEDLKEKVK----DAAG 208
R ++P H A G+++ VK +E+G +D +DLK + + A
Sbjct: 582 AHRNICLIPASAHGTN----PASAAMMGMQVVVVKTDEQGNIDFDDLKAQAEAHSDHLAA 637
Query: 209 VYVEIPNFFGLLEEEVREIGEIAHE-AGAYFVVGVDPTILGIVEAPGELGADIV-VGEAS 266
+ + P+ G+ EE VR++ ++ H+ G ++ G + + V PG +G D+ +
Sbjct: 638 LMITYPSTHGVYEENVRDVCDLIHQHGGQVYLDGANMNAMVGVAKPGLIGGDVSHLNLHK 697
Query: 267 YFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAK 326
F P GGP G V+ L +P + T D+
Sbjct: 698 TFAIPHGGGGPGMGPIGVK--AHLAPFLPNHAVAPTSDSH------------------TG 737
Query: 327 ATSNICSNEALVAVAAAIHIASLGPRGIRELGEVILKNTAYLKKRLSEVAEIPFDGVNFK 386
A S A + + ++I LG G+R+ +V L N Y+ KRLS + + G K
Sbjct: 738 AVSAAPYGSASILPISYLYIKLLGAAGLRQSTQVALLNANYIAKRLSGAFPVLYSG---K 794
Query: 387 DVLVRFE-----KPYKE----IHEELLKRNIHGGYYV-GKHFPELGESALFAATETTRK- 435
V E +P K+ E++ KR + G++ FP G + + TE+ K
Sbjct: 795 GGRVAHECILDIRPLKQESGVSEEDIAKRLMDYGFHAPTMSFPVPG-TLMIEPTESEPKA 853
Query: 436 ---EWVDALISALREV 448
+VDA+++ RE+
Sbjct: 854 ELDRFVDAMLNIRREI 869
>pir||A39521 glycine dehydrogenase (decarboxylating) (EC 1.4.4.2) precursor -
chicken
Length = 1003
Score = 224 bits (566), Expect = 1e-57
Identities = 144/414 (34%), Positives = 220/414 (52%), Gaps = 25/414 (6%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELF-ADIPGKF-IRDELNLPEGKSEYEVFLEMNEILG 60
+H P K EML +G+ S++EL IP +R L + + E E+ + I
Sbjct: 55 RHIGPREREKREMLSAVGVQSVEELMDKTIPASIRLRRPLRMDDHVVENEILETLYNIAS 114
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +++G G Y +P + + L+E + ++T YTPYQPE+SQG L++L YQ++
Sbjct: 115 KNKI---WRSYIGMGYYNCSVPQPIARNLLENAGWVTQYTPYQPEVSQGRLESLLNYQTM 171
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
+ ++ G+ V NAS+ D GTA AEA + R + KR+KF + HP+ T A
Sbjct: 172 VCDITGMDVANASLLDEGTAAAEAMQLCHR--QNKRRKFYIDARCHPQ------TIANYT 223
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
GV E +E + KD +GV + P+ G +E+ E+ E AH+ G
Sbjct: 224 GVITELKLPHE--------MDFSGKDVSGVLFQYPDTEGKVED-FSELIERAHQNGTLAC 274
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLI 299
D L I++ PGE G D+V+G + FG P+ +GGP A FAV+ + L+R MPGR++
Sbjct: 275 CATDLLALCILKPPGEFGVDVVLGSSQRFGVPLCYGGPHAAFFAVKEN--LVRMMPGRMV 332
Query: 300 GMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGE 359
G+T+DA GK + + LQTREQHIRR KATSNIC+ +AL+A AA++ G G++++
Sbjct: 333 GVTRDANGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMYGVYHGSDGLKDIAR 392
Query: 360 VILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYY 413
+ T L + L + F + V KE+ + R I+ Y
Sbjct: 393 RVHNATLILAEGLRRAGHKLHHDLFFDTLTVTCGCSVKEVLDRAALRKINVRIY 446
>sp|P15505|GCSP_CHICK GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN) >gi|212585|gb|AAA49029.1| (M64402) glycine
decarboxylase [Gallus gallus] >gi|222821|dbj|BAA14313.1|
(D90266) glycine decarboxylase precursor [Gallus gallus]
Length = 1004
Score = 224 bits (566), Expect = 1e-57
Identities = 144/414 (34%), Positives = 220/414 (52%), Gaps = 25/414 (6%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELF-ADIPGKF-IRDELNLPEGKSEYEVFLEMNEILG 60
+H P K EML +G+ S++EL IP +R L + + E E+ + I
Sbjct: 56 RHIGPREREKREMLSAVGVQSVEELMDKTIPASIRLRRPLRMDDHVVENEILETLYNIAS 115
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +++G G Y +P + + L+E + ++T YTPYQPE+SQG L++L YQ++
Sbjct: 116 KNKI---WRSYIGMGYYNCSVPQPIARNLLENAGWVTQYTPYQPEVSQGRLESLLNYQTM 172
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
+ ++ G+ V NAS+ D GTA AEA + R + KR+KF + HP+ T A
Sbjct: 173 VCDITGMDVANASLLDEGTAAAEAMQLCHR--QNKRRKFYIDARCHPQ------TIANYT 224
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
GV E +E + KD +GV + P+ G +E+ E+ E AH+ G
Sbjct: 225 GVITELKLPHE--------MDFSGKDVSGVLFQYPDTEGKVED-FSELIERAHQNGTLAC 275
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLI 299
D L I++ PGE G D+V+G + FG P+ +GGP A FAV+ + L+R MPGR++
Sbjct: 276 CATDLLALCILKPPGEFGVDVVLGSSQRFGVPLCYGGPHAAFFAVKEN--LVRMMPGRMV 333
Query: 300 GMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGE 359
G+T+DA GK + + LQTREQHIRR KATSNIC+ +AL+A AA++ G G++++
Sbjct: 334 GVTRDANGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMYGVYHGSDGLKDIAR 393
Query: 360 VILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYY 413
+ T L + L + F + V KE+ + R I+ Y
Sbjct: 394 RVHNATLILAEGLRRAGHKLHHDLFFDTLTVTCGCSVKEVLDRAALRKINVRIY 447
>pir||C82687 glycine decarboxylase XF1385 [imported] - Xylella fastidiosa
(strain 9a5c) >gi|9106393|gb|AAF84194.1|AE003970_1
(AE003970) glycine decarboxylase [Xylella fastidiosa]
Length = 993
Score = 224 bits (565), Expect = 2e-57
Identities = 133/355 (37%), Positives = 198/355 (55%), Gaps = 19/355 (5%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELFADIPGKFIRDE--LNLPEGKSEYEVFLEMNEILG 60
+H PN +ML+ +G S++ L I + IR L+LP+G +E E ++ I
Sbjct: 33 RHIGPNDVEIAQMLRVVGYDSLESLTDAIVPEKIRSTVALDLPKGITEEEALAKIRVIAN 92
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KN+ +F+G G Y + P + + ++E + TAYTPYQ EISQG ++AL +Q++
Sbjct: 93 KNRV---FRSFIGQGYYGTHTPKVILRNVLENPAWYTAYTPYQAEISQGRMEALINFQTM 149
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
A+L G+ + NAS+ D TA AEA + R + + F V HP+ L++L T A+
Sbjct: 150 CADLTGMEIANASLLDEATAAAEAMSLAKRSAKSRSDLFFVHDAVHPQTLELLRTRAEPL 209
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
G+ + E Q D+ G+ ++ P+ FG + + R + + H G
Sbjct: 210 GIVLRVGTPEEALQADV----------FGILLQYPDTFGRIGDH-RVLADAVHARGGLVA 258
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLI 299
V D L ++ PGE GADIVVG + FG P FGGP AG A R+ K R +PGRLI
Sbjct: 259 VASDLLALTLITPPGEWGADIVVGNSQRFGVPFGFGGPHAGFMACRDIYK--RSIPGRLI 316
Query: 300 GMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGI 354
G++ DA G A+ + LQTREQHIRR KATSNIC+ + L+AV A+++ GP+G+
Sbjct: 317 GVSVDAAGHPAYRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPQGL 371
Score = 77.6 bits (188), Expect = 3e-13
Identities = 89/371 (23%), Positives = 162/371 (42%), Gaps = 41/371 (11%)
Query: 100 PYQPEIS-QGMLQALFEYQSLIAELVGLPVVNASMYDWGTAMAEAALMTVRLH---RGKR 155
P P + G Q + E ++++AE G ++ G A L+ +R + RG+
Sbjct: 542 PLAPAVQWSGYRQLIDELEAMLAECTGYDAISLQPNS-GAQGEYAGLLAIRAYHRSRGEE 600
Query: 156 KKFI--VPRHTHPERLQVLETYAKGPGVEIETVKWNERGQVDIEDLK---EKVKDA-AGV 209
++ + +P H A+ G+++ +K + G VD++DL+ EK D+ A +
Sbjct: 601 RRNVCLIPESAHGTN----PASAQLCGMQVVIIKCDRSGNVDVDDLRMKAEKYSDSLAAL 656
Query: 210 YVEIPNFFGLLEEEVREIGEIAH-EAGAYFVVGVDPTILGIVEAPGELGADIV-VGEASY 267
V P+ G+ EE + EI EI H G + G + L V PG G+D+ +
Sbjct: 657 MVTYPSTHGVFEEAITEICEIVHAHGGQVYTDGANMNALVGVAKPGRWGSDVSHLNLHKT 716
Query: 268 FGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAKA 327
F P GGP G AV+ + + T G A + T+E + A
Sbjct: 717 FCIPHGGGGPGVGPCAVKAHL-------APFLPKTLPLPGDAAGLPVQGTQEAKVGMVSA 769
Query: 328 TSNICSNEALVAVAAAIHIASLGPRGIRELGEVILKNTAYLKKRLSEVAEIPFDGVNFKD 387
+ A + + ++I +G G+R+ +V L N Y+ KRL+ + + G +
Sbjct: 770 AN---FGSASILPVSWMYITMMGAAGLRKATQVALLNANYIAKRLAPHYKTLYTG---RH 823
Query: 388 VLVRFE-----KPYKEIH----EELLKRNIHGGYYVGK-HFPELGESALFAATETTRKEW 437
LV E +P +++ E++ KR I G++ FP G + + TE+ ++
Sbjct: 824 GLVAHECILDVRPLEKVSGVSAEDIAKRLIDFGFHAPTLSFPVAG-TLMVEPTESESQQE 882
Query: 438 VDALISALREV 448
+D + A+ ++
Sbjct: 883 LDRFVDAMIQI 893
>pir||S70896 aminomethyltransferase (EC 2.1.2.10) - yeast (Saccharomyces
cerevisiae)
Length = 1034
Score = 223 bits (562), Expect = 4e-57
Identities = 137/378 (36%), Positives = 215/378 (56%), Gaps = 23/378 (6%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELFADI--PGKFIRDELNLPEGKSEY--EVFLEMNEI 58
+H P+ + ++MLK +G S ++ ++ P R L L + +V L+ E
Sbjct: 70 RHLGPSPSVVKKMLKTMGYSDLNAFIEELVPPNILKRRPLKLEAPSKGFCEQVSLQHLEK 129
Query: 59 LGKNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQ 117
+ NK ++ F+G G Y +P + + L+E E+ T+YTPYQPEISQG L+AL +Q
Sbjct: 130 IA-NKNHYKVKNFIGKGYYGTILPPVIQRNLLESPEWYTSYTPYQPEISQGRLEALLNFQ 188
Query: 118 SLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAK 177
+++++L GLPV NAS+ D GTA EA L++ + R K+ K+++ + H + VL T A
Sbjct: 189 TVVSDLTGLPVANASLLDEGTAAGEAMLLSFNISRKKKLKYVIDKKLHQQTKSVLHTRAL 248
Query: 178 GPGVEIETVKWNERGQVDIEDLKEKV-----KDAAGVYVEIPNFFG--LLEEEVREIGEI 230
+EI +VD D+K+ V D +G V+ P G L + ++++ +
Sbjct: 249 PFNIEII--------EVDCSDIKKAVDVLKNPDVSGCLVQYPATDGSILPPDSMKQLSDA 300
Query: 231 AHEAGAYFVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKL 290
H + V D L +++ P GADIV+G + FG PM +GGP A FAV + KL
Sbjct: 301 LHSHKSLLSVASDLMALTLLKPPAHYGADIVLGSSQRFGVPMGYGGPHAAFFAVID--KL 358
Query: 291 IRQMPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLG 350
R++PGR++G++KD GK A +TLQTREQHI+R KATSNIC+ +AL+A A+ + G
Sbjct: 359 NRKIPGRIVGISKDRLGKTALRLTLQTREQHIKRDKATSNICTAQALLANVASSYCVYHG 418
Query: 351 PRGIRELGEVILKNTAYL 368
P+G++ + I T+ L
Sbjct: 419 PKGLQNISRRIFSLTSIL 436
>sp|Q50601|GCSP_MYCTU PROBABLE GLYCINE DEHYDROGENASE [DECARBOXYLATING] (GLYCINE
DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM P-PROTEIN)
>gi|7478080|pir||A70722 probable gcvB protein -
Mycobacterium tuberculosis (strain H37RV)
>gi|1483539|emb|CAB01470.1| (Z78020) gcvB [Mycobacterium
tuberculosis]
Length = 941
Score = 222 bits (559), Expect = 8e-57
Identities = 140/353 (39%), Positives = 191/353 (53%), Gaps = 30/353 (8%)
Query: 15 MLKEIGLSSIDELFADIPGKFIRDEL----------NLPEGKSEYEVFLEMNEILGKNKT 64
ML IG+ S+D+L I D L +LP SE E E+ + N
Sbjct: 22 MLAVIGVDSLDDLAVKAVPAGILDTLTDTGAAPGLDSLPPAASEAEALAELRALADANTV 81
Query: 65 VLEMPTFLGAGTY-FHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQSLIAEL 123
+ M +G G Y H P ++ +IE + TAYTPYQPEISQG L+AL +Q+L+ +L
Sbjct: 82 AVSM---IGQGYYDTHTPPVLLRNIIENPAWYTAYTPYQPEISQGRLEALLNFQTLVTDL 138
Query: 124 VGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGPGVEI 183
GL + NASM D GTA AEA + R RG K+ +V + VL T AK G+EI
Sbjct: 139 TGLEIANASMLDEGTAAAEAMTLMHRAARGPVKRVVVDADVFTQTAAVLATRAKPLGIEI 198
Query: 184 ETVKWNERGQVDIEDLKEKVKDAA--GVYVEIPNFFGLLEEEVREIGEIAHEAGAYFVVG 241
T DL+ + D GV ++P G + + + + AH+ GA VG
Sbjct: 199 VTA-----------DLRAGLPDGEFFGVIAQLPGASGRITDWSALVQQ-AHDRGALVAVG 246
Query: 242 VDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGM 301
D L ++ PGE+GAD+ G FG PM FGGP AG AV K RQ+PGRL+G+
Sbjct: 247 ADLLALTLIAPPGEIGADVAFGTTQRFGVPMGFGGPHAGYLAVH--AKHARQLPGRLVGV 304
Query: 302 TKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGI 354
+ D++G A+ + LQTREQHIRR KATSNIC+ + L+AV AA++ + G G+
Sbjct: 305 SVDSDGTPAYRLALQTREQHIRRDKATSNICTAQVLLAVLAAMYASYHGAGGL 357
>gb|AAF54512.1| (AE003686) CG3999 gene product [Drosophila melanogaster]
Length = 985
Score = 219 bits (553), Expect = 4e-56
Identities = 131/363 (36%), Positives = 207/363 (56%), Gaps = 19/363 (5%)
Query: 2 AKHYIPNSAHKEEMLKEIGLSSIDELFAD-IPGKF-IRDELNLPEGKSEYEVFLEMNEIL 59
++H P ML +G S+ EL +P ++ EL+L + +E+E+ + +I
Sbjct: 39 SRHIGPRKTDVVAMLDTLGFKSLAELTEKAVPQSIQLKRELDLDKPLNEHELIRRIRDIS 98
Query: 60 GKNKTVLEMPTFLGAGTYFHYIP-AHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQS 118
KN+ +++G G + ++P ++ + E + T YTPYQPEI+QG L++L YQ+
Sbjct: 99 LKNQL---WRSYIGMGYHNCHVPHTIIRNMFENPGWTTQYTPYQPEIAQGRLESLLNYQT 155
Query: 119 LIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKG 178
L+ +L GL V NAS+ D GTA AEA + R KRKK + HP+ L V++T +
Sbjct: 156 LVTDLTGLDVANASLLDEGTAAAEAMCLATR--HNKRKKLYLSNRVHPQTLSVVKTRTEA 213
Query: 179 PGVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYF 238
+EI G ++ DL + + AG+ ++ P+ +G +++ +I +A + G
Sbjct: 214 LELEIVV------GPIEQADLPSR--ELAGILLQYPDTYGDVKD-FEDIAALAKKNGTLV 264
Query: 239 VVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRL 298
VV D L ++ P E GADI VG + G P+ +GGP AG FA + L+R MPGR+
Sbjct: 265 VVATDLLSLTLLRPPAEFGADIAVGTSQRLGVPLGYGGPHAGFFACKQS--LVRLMPGRM 322
Query: 299 IGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELG 358
IG+T+D +G A+ + LQTREQHIRR KATSNIC+ +AL+A +A++ GP G++ +
Sbjct: 323 IGVTRDMDGNDAYRLALQTREQHIRRDKATSNICTAQALLANMSAMYAIYHGPEGLKAMA 382
Query: 359 EVI 361
I
Sbjct: 383 NRI 385
>pir||T46636 glycine dehydrogenase (decarboxylating) (EC 1.4.4.2) [imported] -
Hordeum sp. x Triticum sp >gi|2565305|gb|AAB82711.1|
(AF024589) glycine decarboxylase P subunit [Hordeum x
Triticum]
Length = 1031
Score = 217 bits (547), Expect = 2e-55
Identities = 141/392 (35%), Positives = 208/392 (52%), Gaps = 31/392 (7%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELF-ADIPGKFIRDELNLP----EGKSEYEVFLEMNE 57
+H A + M E G +++D L A +P + G +E ++ M
Sbjct: 73 RHNSATPAEQAVMASECGFNTLDALIDATVPAAIRAPPMQFTGKFDAGFTESQMLEHMAH 132
Query: 58 ILGKNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEY 116
+ NKT +F+G G Y +IPA + + L+E + T YTPYQ EI+QG L++L Y
Sbjct: 133 LASMNKTY---KSFIGMGYYNTHIPAVILRNLMENPAWYTQYTPYQAEIAQGRLESLLNY 189
Query: 117 QSLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYA 176
Q+++A+L GLP+ NAS+ D TA AEA M + + + K+K F++ + HP+ + + +T A
Sbjct: 190 QTMVADLTGLPMSNASLLDEATAAAEAMAMCLGIVKSKKKTFLIASNCHPQTIDICQTRA 249
Query: 177 KGPGVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEI---AHE 233
G + + +D D GV V+ P E EV + E AH
Sbjct: 250 TGFDINVVVSA--------AKDFDYSSGDVCGVLVQYPG----TEGEVLDYAEFVKDAHA 297
Query: 234 AGAYFVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQ 293
G V+ D L + PGE+GADI VG A FG PM +GGP A A + K R
Sbjct: 298 HGVKVVMATDLLALTTLRPPGEIGADIAVGSAQRFGVPMGYGGPHAAFLATSQEYK--RL 355
Query: 294 MPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRG 353
MPGR+IG++ D+ GK A M +QTREQHIRR KATSNIC+ +AL+A AA++ GP G
Sbjct: 356 MPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPAG 415
Query: 354 IRELGEVI--LKNT-AYLKKRLSEVA--EIPF 380
++ + + + L T A+ K+L V E+P+
Sbjct: 416 LKAIADRVHGLAGTFAHGLKKLGTVTVQELPY 447
>gb|AAA63798.1| (U11693) victorin binding protein [Avena sativa]
Length = 1032
Score = 215 bits (541), Expect = 1e-54
Identities = 140/392 (35%), Positives = 208/392 (52%), Gaps = 31/392 (7%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELF-ADIPGKFIRDELNLP----EGKSEYEVFLEMNE 57
+H + A + M G +++D L A +P + G +E ++ M
Sbjct: 74 RHNSASPAEQTVMASTCGFNTLDSLIDATVPAAIRAPPMQFTGKFDAGFTESQMLEHMAH 133
Query: 58 ILGKNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEY 116
+ NK +F+G G Y +IPA + + L+E + T YTPYQ EI+QG L++L Y
Sbjct: 134 LASMNKVY---KSFIGMGYYNTHIPAVILRNLMENPAWYTQYTPYQAEIAQGRLESLLNY 190
Query: 117 QSLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYA 176
Q+++A+L GLP+ NAS+ D TA AEA M + + K+K F++ + HP+ + + +T A
Sbjct: 191 QTMVADLTGLPMSNASLLDEATAAAEAMAMCNGILKAKKKTFLIASNCHPQTIDICQTRA 250
Query: 177 KGPGVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEI---AHE 233
G + + D +D D GV V+ P E EV + E AH+
Sbjct: 251 AGFDLNVVV--------SDAKDFDYSSGDVCGVLVQYPG----TEGEVLDYAEFVKDAHK 298
Query: 234 AGAYFVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQ 293
G V+ D L + PGE+GADI VG A FG PM +GGP A A + K R
Sbjct: 299 HGVKVVMATDLLALTTLRPPGEIGADIAVGSAQRFGVPMGYGGPHAAFLATSQEYK--RL 356
Query: 294 MPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRG 353
MPGR+IG++ D+ GK A M +QTREQHIRR KATSNIC+ +AL+A AA++ GP G
Sbjct: 357 MPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPAG 416
Query: 354 IRELGEVI--LKNT-AYLKKRLSEVA--EIPF 380
++ + + + L T A+ K+L V E+P+
Sbjct: 417 LKAIADRVHGLAGTFAHGLKKLGTVTVQELPY 448
>pir||S76257 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1653603|dbj|BAA18516.1| (D90914) P protein of
glycine cleavage complex [Synechocystis sp.]
Length = 983
Score = 213 bits (537), Expect = 3e-54
Identities = 127/369 (34%), Positives = 199/369 (53%), Gaps = 18/369 (4%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELFADIPGKFIR--DELNLPEGKSEYEVFLEMNEILG 60
+H P + +ML+ +G ++ +L IR L LP +SEY ++ I
Sbjct: 36 RHLGPGETEQRQMLQTLGFDTLGDLIDQAVPPAIRFPRSLQLPASQSEYGAIAQLKSIAS 95
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KN+ +++G G Y P + + ++E + TAYTPYQ EI+QG L+AL +Q++
Sbjct: 96 KNQV---FRSYIGMGYYDTITPPVIQRNILENPGWYTAYTPYQAEIAQGRLEALLNFQTM 152
Query: 120 IAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGP 179
+ +L GL + NAS+ D GTA AEA ++ + + K F V + HP+ ++V++T A
Sbjct: 153 VMDLTGLEIANASLLDEGTAAAEAMALSYGVSKSKANAFFVAQDCHPQTIEVIKTRANPL 212
Query: 180 GVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFV 239
G+E+ G + G ++ P G + + R + AH+ A
Sbjct: 213 GIEVIV------GDHHTFSFSTSI---FGALLQYPATDGAV-YDYRSFIDKAHQHQALVT 262
Query: 240 VGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLI 299
+ DP L ++ PGELGADI VG FG P+ +GGP A FA + + + R+MPGR++
Sbjct: 263 LAADPLSLTLLTPPGELGADIAVGSTQRFGIPLGYGGPHAAYFATKAEYQ--RKMPGRIV 320
Query: 300 GMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGE 359
G++KDA G A + LQTREQHIRR KATSNIC+ + L+AV A+++ G G++ +
Sbjct: 321 GVSKDAHGNPALRLALQTREQHIRRDKATSNICTAQVLLAVMASMYGVYHGSTGLKNIAL 380
Query: 360 VILKNTAYL 368
I + T L
Sbjct: 381 RIHQLTVLL 389
>sp|P33195|GCSP_ECOLI GLYCINE DEHYDROGENASE [DECARBOXYLATING] (GLYCINE DECARBOXYLASE)
(GLYCINE CLEAVAGE SYSTEM P-PROTEIN)
>gi|480419|pir||S36834 glycine dehydrogenase
(decarboxylating) (EC 1.4.4.2) - Escherichia coli
>gi|304892|gb|AAA23867.1| (L20872) gcvHP [Escherichia
coli] >gi|403345|emb|CAA52146.1| (X73958) glycine
dehydrogenase (decarboxylating) [Escherichia coli]
>gi|1789269|gb|AAC75941.1| (AE000373) glycine
decarboxylase, P protein of glycine cleavage system
[Escherichia coli K12]
Length = 957
Score = 212 bits (534), Expect = 7e-54
Identities = 143/388 (36%), Positives = 208/388 (52%), Gaps = 43/388 (11%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELFADIPGKFIR----DELNLPEGKSEYEVFLEMNEI 58
+H P++A ++EML +G S++ L I K I+ ++ P +EY E+ I
Sbjct: 17 RHIGPDAAQQQEMLNAVGAQSLNALTGQIVPKDIQLATPPQVGAPA--TEYAALAELKAI 74
Query: 59 LGKNKTVLEMPTFLGAG-TYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQ 117
+NK +++G G T P ++ ++E + TAYTPYQPE+SQG L+AL +Q
Sbjct: 75 ASRNK---RFTSYIGMGYTAVQLPPVILRNMLENPGWYTAYTPYQPEVSQGRLEALLNFQ 131
Query: 118 SLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKR-KKFIVPRHTHPERLQVLETYA 176
+ +L GL + +AS+ D TA AEA M R+ + K +F V HP+ L V+ T A
Sbjct: 132 QVTLDLTGLDMASASLLDEATAAAEAMAMAKRVSKLKNANRFFVASDVHPQTLDVVRTRA 191
Query: 177 KGPGVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGA 236
+ G E+ I D +KV D V FG+L ++V GEI H+ A
Sbjct: 192 ETFGFEV------------IVDDAQKVLDHQDV-------FGVLLQQVGTTGEI-HDYTA 231
Query: 237 YF--------VVGVDPTILGIV--EAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRN 286
VV V I+ +V APG+ GADIV G A FG PM +GGP A FA ++
Sbjct: 232 LISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKD 291
Query: 287 DMKLIRQMPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHI 346
+ K R MPGR+IG++KDA G A M +QTREQHIRR KA SNIC+++ L+A A+++
Sbjct: 292 EYK--RSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYA 349
Query: 347 ASLGPRGIRELGEVILKNTAYLKKRLSE 374
GP G++ + I + T L L +
Sbjct: 350 VYHGPVGLKRIANRIHRLTDILAAGLQQ 377
Score = 71.4 bits (172), Expect = 2e-11
Identities = 87/374 (23%), Positives = 153/374 (40%), Gaps = 48/374 (12%)
Query: 93 EFLTAYTPYQPEISQGMLQALFEYQSLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHR 152
EF + PE ++G Q + + + +L G V + G A L+ +R +
Sbjct: 529 EFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAV-CMQPNSGAQGEYAGLLAIRHYH 587
Query: 153 -----GKRKKFIVPRHTHPERLQVLETYAKGPGVEIETVKWNERGQVDIEDLKEKVKDAA 207
G R ++P H A G+++ V ++ G +D+ DL+ K + A
Sbjct: 588 ESRNEGHRDICLIPASAHGTN----PASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAG 643
Query: 208 G----VYVEIPNFFGLLEEEVREIGEIAHE-AGAYFVVGVDPTILGIVEAPGELGADIV- 261
+ V P+ G+ EE +RE+ E+ H+ G ++ G + + +PG +GAD+
Sbjct: 644 DNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGADVSH 703
Query: 262 VGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDAEGKRAFVMTLQTREQH 321
+ F P GGP G V+ L +PG + E
Sbjct: 704 LNLHKTFCIPHGGGGPGMGPIGVK--AHLAPFVPGHSVVQI----------------EGM 745
Query: 322 IRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVILKNTAYLKKRLSEVAEIPFD 381
+ R A S A + + ++I +G G+++ +V + N Y+ RL + + +
Sbjct: 746 LTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQDAFPVLYT 805
Query: 382 GVNFKDVLVRFE-----KPYKE---IHE-ELLKRNIHGGYYV-GKHFPELGESALFAATE 431
G +D V E +P KE I E ++ KR I G++ FP G + + TE
Sbjct: 806 G---RDGRVAHECILDIRPLKEETGISELDIAKRLIDYGFHAPTMSFPVAG-TLMVEPTE 861
Query: 432 TTRKEWVDALISAL 445
+ K +D I A+
Sbjct: 862 SESKVELDRFIDAM 875
>gb|AAA69071.1| (U28377) ORF_f957 [Escherichia coli]
Length = 957
Score = 212 bits (534), Expect = 7e-54
Identities = 143/388 (36%), Positives = 208/388 (52%), Gaps = 43/388 (11%)
Query: 3 KHYIPNSAHKEEMLKEIGLSSIDELFADIPGKFIR----DELNLPEGKSEYEVFLEMNEI 58
+H P++A ++EML +G S++ L I K I+ ++ P +EY E+ I
Sbjct: 17 RHIGPDAAQQQEMLNAVGAQSLNALTGQIVPKDIQLATPPQVGAPA--TEYAALAELKAI 74
Query: 59 LGKNKTVLEMPTFLGAG-TYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQ 117
+NK +++G G T P ++ ++E + TAYTPYQPE+SQG L+AL +Q
Sbjct: 75 ASRNK---RFTSYIGMGYTAVQLPPVILRNMLENPGWYTAYTPYQPEVSQGRLEALLNFQ 131
Query: 118 SLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKR-KKFIVPRHTHPERLQVLETYA 176
+ +L GL + +AS+ D TA AEA M R+ + K +F V HP+ L V+ T A
Sbjct: 132 QVTLDLTGLDMASASLLDEATAAAEAMAMAKRVXKLKNANRFFVASDVHPQTLDVVRTRA 191
Query: 177 KGPGVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGA 236
+ G E+ I D +KV D V FG+L ++V GEI H+ A
Sbjct: 192 ETFGFEV------------IVDDAQKVLDHQDV-------FGVLLQQVGTTGEI-HDYTA 231
Query: 237 YF--------VVGVDPTILGIV--EAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRN 286
VV V I+ +V APG+ GADIV G A FG PM +GGP A FA ++
Sbjct: 232 LISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKD 291
Query: 287 DMKLIRQMPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHI 346
+ K R MPGR+IG++KDA G A M +QTREQHIRR KA SNIC+++ L+A A+++
Sbjct: 292 EYK--RSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYA 349
Query: 347 ASLGPRGIRELGEVILKNTAYLKKRLSE 374
GP G++ + I + T L L +
Sbjct: 350 VYHGPVGLKRIANRIHRLTDILAAGLQQ 377
Score = 71.4 bits (172), Expect = 2e-11
Identities = 87/374 (23%), Positives = 153/374 (40%), Gaps = 48/374 (12%)
Query: 93 EFLTAYTPYQPEISQGMLQALFEYQSLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHR 152
EF + PE ++G Q + + + +L G V + G A L+ +R +
Sbjct: 529 EFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAV-CMQPNSGAQGEYAGLLAIRHYH 587
Query: 153 -----GKRKKFIVPRHTHPERLQVLETYAKGPGVEIETVKWNERGQVDIEDLKEKVKDAA 207
G R ++P H A G+++ V ++ G +D+ DL+ K + A
Sbjct: 588 ESRNEGHRDICLIPASAHGTN----PASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAG 643
Query: 208 G----VYVEIPNFFGLLEEEVREIGEIAHE-AGAYFVVGVDPTILGIVEAPGELGADIV- 261
+ V P+ G+ EE +RE+ E+ H+ G ++ G + + +PG +GAD+
Sbjct: 644 DNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGADVSH 703
Query: 262 VGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDAEGKRAFVMTLQTREQH 321
+ F P GGP G V+ L +PG + E
Sbjct: 704 LNLHKTFCIPHGGGGPGMGPIGVK--AHLAPFVPGHSVVQI----------------EGM 745
Query: 322 IRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVILKNTAYLKKRLSEVAEIPFD 381
+ R A S A + + ++I +G G+++ +V + N Y+ RL + + +
Sbjct: 746 LTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQDAFPVLYT 805
Query: 382 GVNFKDVLVRFE-----KPYKE---IHE-ELLKRNIHGGYYV-GKHFPELGESALFAATE 431
G +D V E +P KE I E ++ KR I G++ FP G + + TE
Sbjct: 806 G---RDGRVAHECILDIRPLKEETGISELDIAKRLIDYGFHAPTMSFPVAG-TLMVEPTE 861
Query: 432 TTRKEWVDALISAL 445
+ K +D I A+
Sbjct: 862 SESKVELDRFIDAM 875
>pir||E82994 glycine cleavage system protein P1 PA5213 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9951520|gb|AAG08598.1|AE004934_5 (AE004934) glycine
cleavage system protein P1 [Pseudomonas aeruginosa]
Length = 958
Score = 209 bits (527), Expect = 5e-53
Identities = 132/371 (35%), Positives = 196/371 (52%), Gaps = 19/371 (5%)
Query: 1 MAKHYIPNSAHKEEMLKEIGLSSIDELFADI--PGKFIRDELNLPEGKSEYEVFLEMNEI 58
+ +H P+ A ++ ML +G+S+ EL P + L LP E +
Sbjct: 17 LRRHLGPDPAEQQAMLAFLGVSTRAELIVQTVPPAIRLNRPLELPAALDEQAALARLRGY 76
Query: 59 LGKNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQ 117
G N+ + +G G Y P+ + + ++E + TAYTPYQPEI+QG L+AL +Q
Sbjct: 77 AGLNQ---RWTSLIGMGYYGTVTPSVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQ 133
Query: 118 SLIAELVGLPVVNASMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAK 177
L +L GL + +AS+ D TA AEA + R+ + + +F V H HP+ + VL T A+
Sbjct: 134 QLTIDLTGLDLASASLLDEATAAAEAMALARRVAKARSNRFFVDAHCHPQTVSVLRTRAE 193
Query: 178 GPGVEIETVKWNERGQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAY 237
G E+ VD D G ++ P+ G + ++R + E H A
Sbjct: 194 AFGFEL---------VVDEPD-NLAAHAVFGALLQYPDSRGEI-RDLRPLIEALHGQQAL 242
Query: 238 FVVGVDPTILGIVEAPGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGR 297
V D L ++ PGELGAD+V+G A FG PM +GGP A FA R K R MPGR
Sbjct: 243 ACVASDLLALLLLTPPGELGADVVLGSAQRFGVPMGYGGPHAAFFATREGYK--RAMPGR 300
Query: 298 LIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIREL 357
+IG+++DA G A M LQTREQHIRR KA SNIC+ + L+A A+++ GP+ ++ +
Sbjct: 301 IIGVSRDARGNPALRMALQTREQHIRREKANSNICTAQVLLANIASLYAVYHGPQELKRI 360
Query: 358 GEVILKNTAYL 368
+ + + TA L
Sbjct: 361 AQRVQRLTALL 371
>pir||D81821 glycine dehydrogenase (decarboxylating) (EC 1.4.4.2) NMA1934
[imported] - Neisseria meningitidis (group A strain
Z2491) >gi|7380566|emb|CAB85154.1| (AL162757) glycine
dehydrogenase [Neisseria meningitidis Z2491]
Length = 950
Score = 203 bits (510), Expect = 5e-51
Identities = 124/350 (35%), Positives = 190/350 (53%), Gaps = 19/350 (5%)
Query: 15 MLKEIGLSSIDELFADIPGKFIR--DELNLPEGKSEYEVFLEMNEILGKNKTVLEMPTFL 72
+L + S+DE + + IR EL+LPE +E + ++ I KN + +++
Sbjct: 25 LLAAVDEKSMDEFVGNTVPQSIRMPSELDLPEALTEADALAKLKGIASKN---MINKSYI 81
Query: 73 GAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSLIAELVGLPVVNA 131
G G Y +P + + ++E + TAYTPYQ EI+QG L+AL +Q + +L G PV A
Sbjct: 82 GLGYYPTRVPNVILRNVLENPGWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGA 141
Query: 132 SMYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGPGVEIETVKWNER 191
S+ D TA AEA M R+ + K ++F V +P+ L V++T AK G E+ + +
Sbjct: 142 SLLDEATAAAEAMAMAHRVGKVKSERFFVDERVYPQTLDVMKTRAKYFGFELVVGDFAQA 201
Query: 192 GQVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFVVGVDPTILGIVE 251
+ + + G ++ + G L+ + G V D L +++
Sbjct: 202 DEGEYFGALFQYVGKDGDVQDLQDVIGRLKAK-----------GTIVAVAADIMSLVLLK 250
Query: 252 APGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDAEGKRAF 311
+P ELGADI +G FG PM FGGP A FA +++ K R PGR+IG++KDA GK A
Sbjct: 251 SPAELGADIALGNTQRFGVPMGFGGPHAAYFAFKDEFK--RSAPGRIIGVSKDASGKPAL 308
Query: 312 VMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVI 361
M L TREQHIRR KATSNIC+ +AL+A A ++ GP+G++ + + I
Sbjct: 309 RMALSTREQHIRREKATSNICTAQALLANLAGMYAVYHGPKGVKRIADRI 358
>emb|CAA72254.1| (Y11467) putative glycine dehydrogenase (decarboxylating) subunit 1
[Thermus thermophilus]
Length = 333
Score = 197 bits (496), Expect = 2e-49
Identities = 127/324 (39%), Positives = 178/324 (54%), Gaps = 23/324 (7%)
Query: 133 MYDWGTAMAEAALMTVRLHRGKRKKFIVPRHTHPERLQVLETYAKGPGVEIETVKWNERG 192
MYD TA+AE L+ +R R +V + HPE VL Y + G ++ T+ E G
Sbjct: 25 MYDGATALAEGVLLALR--ETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGG 81
Query: 193 QVDIEDLKEKVKDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFVVGVDPTILGIVEA 252
+ + ++ E+V V V+ PNF G LE+ + E AH AGA FV DP LG+++
Sbjct: 82 RTPLPEVGEEV---GAVVVQNPNFLGALED-LGPFAEAAHGAGALFVAVADPLSLGVLKP 137
Query: 253 PGELGADIVVGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDAEGKRAFV 312
PG G DI VG+ G PM FGGP G A + +RQ+PGRL+ T D EG+R F+
Sbjct: 138 PGAYGVDIAVGDGQSLGLPMGFGGPHFGFLATKK--AFVRQLPGRLVSETVDVEGRRGFI 195
Query: 313 MTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVILKNTAYLKKRL 372
+TLQ REQ+IRRAKA SNI +N L A+ A+++A+LGP G+R EV LK+ K
Sbjct: 196 LTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLR---EVALKSVEMAHKLH 252
Query: 373 SEVAEIPFDGVN-------FKDVLVRFEKPYKEIHEELLKRNIHGGYYVGKHFPELGESA 425
+ + E+P GV F + + K + + L +R HG V + + E A
Sbjct: 253 ALLLEVP--GVRPFTPKPFFNEFALALPKDPEAVRRALAERGFHGATPVPREYGE--NLA 308
Query: 426 LFAATETTRKEWVDALISALREVI 449
LFAATE +E + AL AL+EV+
Sbjct: 309 LFAATELHEEEDLLALREALKEVL 332
>dbj|BAB06533.1| (AP001516) glycine dehydrogenase subunit 2 [Bacillus halodurans]
Length = 488
Score = 115 bits (284), Expect = 1e-24
Identities = 128/441 (29%), Positives = 201/441 (45%), Gaps = 52/441 (11%)
Query: 31 IPGKFIRDEL-NLPEGKSEYEVFLEMNEILGKNKTVLEMPTFLGAGTYFHYIPAHVKYLI 89
IP +F+R+E LPE SE ++ + +N V LG+ T +KY
Sbjct: 36 IPAEFLREEAPELPE-VSELQLMRHYTALSKRNHGVDSGFYPLGSCT--------MKYNP 86
Query: 90 ERSEFLTAYT------PYQPEIS-QGMLQALFEYQSLIAELVGLPVVNASMYDWGTAMAE 142
+ +E + Y PYQPE QG L+ ++E Q+ +AE+ G+ V ++ A E
Sbjct: 87 KINEDVARYPGFANIHPYQPEAQVQGALRLMYELQTALAEITGMDEV--TLQPAAGAQGE 144
Query: 143 -AALMTVRLHRG-----KRKKFIVPRHTHPERLQVLETYAKGPGVEIETVKWNERGQVDI 196
LM +R + R K IVP H A G E TV+ +E G VD+
Sbjct: 145 WTGLMLIRAYHEANGDTNRTKVIVPDSAHGTN----PASATVAGFESVTVRTDEDGLVDL 200
Query: 197 EDLKEKV-KDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGA--YFVVGVDPTILGIVEAP 253
+ L+E V +D A + + PN GL E + E+ I HEAG Y+ ILGI P
Sbjct: 201 DHLREVVGEDTAALMLTNPNTLGLFEAHIVEMAAIIHEAGGKLYYDGANSNAILGIAR-P 259
Query: 254 GELGADIV-VGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDAEGKRAFV 312
G++G D+V + F P GGP +G V+ + LI +P ++ KD + R
Sbjct: 260 GDMGFDVVHLNLHKTFTGPHGGGGPGSGPVGVKKE--LIPYLPKPVV--VKDGDSYRLDY 315
Query: 313 MTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVILKNTAYLKKRL 372
R I R K + V A +I ++GP G+R + E + N Y+ +RL
Sbjct: 316 ----DRPHSIGRVKPYYGNFG----INVRAYTYIRTMGPEGLRTVSEYAVLNANYMMRRL 367
Query: 373 SEVAEIPFDGVNFKDVLVRFEKPYKEIHE---ELLKRNIHGGYYVGK-HFP-ELGESALF 427
+ ++P+D + K V + K++ ++ KR + GY+ +FP + E +
Sbjct: 368 APYFDLPYD-QHCKHEFVLSGRQQKKLGVRTLDIAKRLLDFGYHPPTIYFPLNVEECLMI 426
Query: 428 AATETTRKEWVDALISALREV 448
TET KE +D I A+ ++
Sbjct: 427 EPTETESKETLDEFIEAMIQI 447
>sp|P54377|GCS2_BACSU PROBABLE GLYCINE DEHYDROGENASE [DECARBOXYLATING] SUBUNIT 2 (GLYCINE
DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM P-PROTEIN)
>gi|7451546|pir||B69959 glycine dehydrogenase homolog
yqhK - Bacillus subtilis >gi|1303892|dbj|BAA12548.1|
(D84432) YqhK [Bacillus subtilis]
>gi|2634889|emb|CAB14386.1| (Z99116) similar to glycine
dehydrogenase [Bacillus subtilis]
Length = 488
Score = 112 bits (278), Expect = 7e-24
Identities = 129/429 (30%), Positives = 195/429 (45%), Gaps = 36/429 (8%)
Query: 35 FIRDE-LNLPEGKSEYEVFLEMNEILGKNKTVLEMPTFLGAGTYFHYIPAHVKYLIERSE 93
+IRDE LPE SE ++ + +N V LG+ T Y P + I R
Sbjct: 40 YIRDEDAALPE-VSELDIMRHYTALSKRNHGVDSGFYPLGSCT-MKYNPK-INEKIARIP 96
Query: 94 FLTAYTPYQPEIS-QGMLQALFEYQSLIAELVGLPVVNASMYDWGTAMAEAALMTVRLH- 151
A P Q E + QG L+ L++ + E+ G+ V G LM +R +
Sbjct: 97 GFAAIHPLQDEDTVQGALELLYDLSKHLEEITGMDEVTLQPAA-GAHGEWTGLMMIRAYH 155
Query: 152 --RG--KRKKFIVPRHTHPERLQVLETYAKGPGVEIETVKWNERGQVDIEDLKEKV-KDA 206
RG KR K IVP H A G E TVK NE+G VD+EDLK V ++
Sbjct: 156 EARGDFKRTKVIVPDSAHGTN----PASATVAGFETVTVKSNEKGLVDLEDLKRAVNEET 211
Query: 207 AGVYVEIPNFFGLLEEEVREIGEIAHEAGA-YFVVGVDPTILGIVEAPGELGADIV-VGE 264
A + + PN GL EE++ E+ EI H+AG + G + + PG++G D+V +
Sbjct: 212 AALMLTNPNTLGLFEEQITEMAEIVHQAGGKLYYDGANLNAVLSKARPGDMGFDVVHLNL 271
Query: 265 ASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDAEGKRAFVMTLQTREQHIRR 324
F P GGP +G V+ D LI +P ++ EG+ F R I R
Sbjct: 272 HKTFTGPHGGGGPGSGPVGVKQD--LIPYLPKPVL---VKKEGRFTFDYD---RPHAIGR 323
Query: 325 AKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVILKNTAYLKKRLSEVAEIPFDGVN 384
K + V A +I S+GP G++ + E + N Y+ ++L+ ++PFD +
Sbjct: 324 VKPYYGNFG----INVRAYTYIRSMGPDGLKAVTENAVLNANYMMRKLAPYYDLPFDR-H 378
Query: 385 FKDVLVRFEKPYKEIHE---ELLKRNIHGGYYVGK-HFP-ELGESALFAATETTRKEWVD 439
K V K K++ ++ KR + GY+ +FP + E + TET KE +D
Sbjct: 379 CKHEFVLSGKRQKKLGVRTLDIAKRLLDFGYHPPTIYFPLNVEECIMIEPTETESKETLD 438
Query: 440 ALISALREV 448
A I A+ ++
Sbjct: 439 AFIDAMIQI 447
>pir||H72403 glycine dehydrogenase (decarboxylating) subunit 2 - Thermotoga
maritima (strain MSB8)
>gi|4980712|gb|AAD35306.1|AE001706_5 (AE001706) glycine
dehydrogenase (decarboxylating) subunit 2 [Thermotoga
maritima]
Length = 474
Score = 108 bits (267), Expect = 1e-22
Identities = 105/366 (28%), Positives = 174/366 (46%), Gaps = 37/366 (10%)
Query: 100 PYQP-EISQGMLQALFEYQSLIAELVGLPVVNASMYDWGTAMAE-AALMTVRLH---RGK 154
PYQP E QG L+ ++E + ++ E+ G+ + ++ A E ++ VR + RG
Sbjct: 93 PYQPVETVQGSLRLMYELKKMLCEITGMD--DMTLQPAAGAHGELTGMLIVREYFKNRGD 150
Query: 155 --RKKFIVPRHTHPERLQVLETYAKGPGVEIETVKWNERGQVDIEDLKEKV-KDAAGVYV 211
RKK +VP H A G E+ +K ++ G VD+EDLK+ + ++ A V +
Sbjct: 151 TGRKKVLVPDSAHGTN----PASASMVGFEVVEIK-SKNGMVDVEDLKKLLDEEVAAVML 205
Query: 212 EIPNFFGLLEEEVREIGEIAHEAGA--YFVVGVDPTILGIVEAPGELGADIV-VGEASYF 268
PN GL E+++ +I E+ HE GA Y+ I+G V PG++G DIV + F
Sbjct: 206 TNPNTLGLFEKDILKIAEMTHECGALLYYDGANLNAIMGKVR-PGDMGFDIVHLNLHKTF 264
Query: 269 GNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDAEGKRAFVMTLQTREQHIRRAKAT 328
P GGP +G V+ + P + K+ E FV E+ I R ++
Sbjct: 265 STPHGMGGPGSGPVGVKKHLVDFLPFPQ----VKKNGELYELFVP-----EKTIGRVRSF 315
Query: 329 SNICSNEALVAVAAAIHIASLGPRGIRELGEVILKNTAYLKKRLSEVAEIPFDGVNFKDV 388
V V A +I ++G G+ + E+ + N YLKK++ + EIP++G +
Sbjct: 316 FG----NFPVLVKAYTYILTMGRDGLERVSEMAVLNANYLKKKIEKFLEIPYNGFCMHEF 371
Query: 389 LVRFEKPYKEIHE---ELLKRNIHGGYYVGK-HFPEL-GESALFAATETTRKEWVDALIS 443
+ EK ++E ++ KR + G + +FP + E+ + TET KE +D
Sbjct: 372 VASAEKVFRETGVRTLDIAKRILDFGVHPPTVYFPLIVPEALMIEPTETENKETLDKYAE 431
Query: 444 ALREVI 449
L V+
Sbjct: 432 ILERVV 437
>pir||D75030 probable glycine dehydrogenase (decarboxylating) (EC 1.4.4.2) chain
2 PAB1172 - Pyrococcus abyssi (strain Orsay)
>gi|5459196|emb|CAB50682.1| (AJ248288) PROBABLE GLYCINE
DEHYDROGENASE (DECARBOXYLATING SUBUNIT 2 (EC 1.4.4.2)
(GLYCINE DECARBOXYLASE) GLYCINE CLEAVAGE SYSTEM
P-PROTEIN). [Pyrococcus abyssi]
Length = 502
Score = 102 bits (252), Expect = 8e-21
Identities = 124/452 (27%), Positives = 201/452 (44%), Gaps = 55/452 (12%)
Query: 24 IDELFADIPGKFIRDE-LNLPEGKSEYEVFLEMNEILGKNKTVLEMPTFLGAGTYFHYIP 82
I+++ +IP K R LNLPE SE EV + N V LG+ T
Sbjct: 29 IEDVDVEIPEKLKRKSPLNLPE-VSEPEVVKHYTRLSEMNYGVDSGIYPLGSCT------ 81
Query: 83 AHVKYLIERSEFLTAYT------PYQPEIS-QGMLQALFEYQSLIAELVGL------PVV 129
+KY + +E L + PYQ E + QG L+ ++E + + E+ G+ P
Sbjct: 82 --MKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAA 139
Query: 130 NASMYDWGTAMAEAALMTVRLHRGK--RKKFIVPRHTHPERLQVLETYAKGPGVEIETVK 187
A+ G + +A L RG+ R + +VP H A G ++ +
Sbjct: 140 GANGEFTGVMIIKA----YHLDRGETQRNEMLVPDSAHGTN----PASAAMAGFKVIEIP 191
Query: 188 WNERGQVDIEDLKEKVKD-AAGVYVEIPNFFGLLEEEVREIGEIAHEAGA--YFVVGVDP 244
NE G VD+E L+ V + AG+ + PN G+ E+E+ EI +I H+AG Y+
Sbjct: 192 SNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLN 251
Query: 245 TILGIVEAPGELGADIV-VGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTK 303
ILG V PG++G DIV + F P GGP AG V+ +K +P ++
Sbjct: 252 GILGKVR-PGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVP----LVSY 306
Query: 304 DAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVILK 363
D E R ++ + + ++ V V A ++ +G G+RE+ EV +
Sbjct: 307 DEENDRYYL------DYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREVSEVAVL 360
Query: 364 NTAYLKKRLSEVA--EIPFDGVNFKDVLVRFEKPYKEIHEELL---KRNIHGGYYVGK-H 417
N YL ++L E+P + +V+ E +E L KR + G + +
Sbjct: 361 NANYLARKLKGTRGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIY 420
Query: 418 FPEL-GESALFAATETTRKEWVDALISALREV 448
FP + E+ + TET KE +DA + A++++
Sbjct: 421 FPLIVHEALMIEPTETVSKEELDAYVEAMKKI 452
>pir||B71216 probable glycine dehydrogenase subunit 2 - Pyrococcus horikoshii
>gi|3258438|dbj|BAA31121.1| (AP000007) 502aa long
hypothetical glycine dehydrogenase subunit 2 [Pyrococcus
horikoshii]
Length = 502
Score = 100 bits (247), Expect = 3e-20
Identities = 122/446 (27%), Positives = 197/446 (43%), Gaps = 43/446 (9%)
Query: 24 IDELFADIPGKFIRDE-LNLPEGKSEYEVFLEMNEILGKNKTVLEMPTFLGAGTYFHYIP 82
I+++ +IP K R L LPE SE EV + N V LG+ T Y P
Sbjct: 29 IEDVKVEIPEKLKRKTPLELPE-VSEPEVVKHYTRLSEMNYGVDSGIYPLGSCT-MKYNP 86
Query: 83 AHVKYLIERSEFLTAYTPYQPEIS-QGMLQALFEYQSLIAELVGL------PVVNASMYD 135
+ I + PYQ E + QG L+ ++E + + E+ G+ P A+
Sbjct: 87 K-INEEIANHPKVAFIHPYQDERTVQGALKIMWELEQWLKEITGMDRFTLQPAAGANGEF 145
Query: 136 WGTAMAEAALMTVRLHRG--KRKKFIVPRHTHPERLQVLETYAKGPGVEIETVKWNERGQ 193
G + +A L RG +R + +VP H A G ++ + NE G
Sbjct: 146 TGVMIIKA----YHLDRGDTQRTEILVPDSAHGTN----PASASMAGFKVVEIPSNENGT 197
Query: 194 VDIEDLKEKVKD-AAGVYVEIPNFFGLLEEEVREIGEIAHEAGA--YFVVGVDPTILGIV 250
VD+E L+ V + AG+ + PN G+ E+E+ EI +I H+ G Y+ ILG V
Sbjct: 198 VDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKVGGLLYYDGANLNGILGKV 257
Query: 251 EAPGELGADIV-VGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDAEGKR 309
PG++G DIV + F P GGP AG V+ +K +P ++ D E R
Sbjct: 258 R-PGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVP----LVSYDEENDR 312
Query: 310 AFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVILKNTAYLK 369
++ + ++ ++ V V A ++ +G G+RE+ EV + N YL
Sbjct: 313 YYL------DYNVPKSIGKVKELFGNFAVLVKALTYLKIMGKEGLREVSEVAVLNANYLA 366
Query: 370 KRLSEVA--EIPFDGVNFKDVLVRFEKPYKEIHEELL---KRNIHGGYYVGK-HFPEL-G 422
++L E+P + +V+ E KE L KR + G + +FP +
Sbjct: 367 RKLKGTRGYELPHKELRKHEVVFSAEPMKKETGVRTLDVAKRLLDFGLHAPTIYFPLIVH 426
Query: 423 ESALFAATETTRKEWVDALISALREV 448
E+ + TE+ KE +DA + AL+++
Sbjct: 427 EALMIEPTESVSKEELDAYVEALKKI 452
>emb|CAC12478.1| (AL445067) glycine dehydrogenase (decarboxylating) related protein,
subunit 2 [Thermoplasma acidophilum]
Length = 472
Score = 97.1 bits (238), Expect = 4e-19
Identities = 118/457 (25%), Positives = 201/457 (43%), Gaps = 44/457 (9%)
Query: 11 HKEEMLKEIGLSSIDELFADI-----PGKFIRDELNLPEGKSEYEVFLEMNEILGKNKTV 65
+ E ++K+I + +L D+ P R +L LP+ SE +V + N TV
Sbjct: 8 YDEPLIKDIKSDTSFKLSEDVDENLLPQDMRRTDLKLPQ-VSEVDVVRHYTRLSQMNYTV 66
Query: 66 LEMPTFLGAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEIS-QGMLQALFEYQSLIAELV 124
LG+ T Y P + + +EF + P+QPE + QG LQ ++E Q + ++
Sbjct: 67 DVGIYPLGSCT-MKYNPKYADRIASFAEFRNIH-PFQPESTVQGTLQIMYELQEFLKKIS 124
Query: 125 GLPVVNASMYDWGTAMAEAALMTVR----LHRGKRKKFIVPRHTHPERLQVLETYAKGPG 180
+ V L+ + LH R + IVP H A G
Sbjct: 125 DMDAVTLQPMAGADGEFTGILIIKKYFEDLHED-RTEIIVPDSAHGTN----PASATMGG 179
Query: 181 VEIETVKWNERGQVDIEDLKEKV-KDAAGVYVEIPNFFGLLEEEVREIGEIAHEAGA-YF 238
++ + N G VD+ LK + K A + + PN G+ E+ + EI +I H+AGA +
Sbjct: 180 FDVVEIPSNSEGMVDLNALKAAISKKTAALMITNPNTLGIFEQNITEIAKILHDAGALLY 239
Query: 239 VVGVDPTILGIVEAPGELGADIV-VGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGR 297
G + + + +PG +G DIV F P GGP AG AV++ + +P
Sbjct: 240 YDGANLNAIFGITSPGLMGFDIVHFNLHKSFATPHGGGGPGAGPVAVKSFLSDFLPVP-- 297
Query: 298 LIGMTKDAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIREL 357
++G +GKR F+ +++ I R + S + + A ++ G G++
Sbjct: 298 VVGY----DGKRYFLD--YGKKKSIGRVSSFYGSFS----ILLRAWSYVIRNGDDGLKNA 347
Query: 358 GEVILKNTAYLKKRLSEVAEIPFDGVNFKDVLVRFEKPYK---EIHEELLKRNIHGGYYV 414
+ N+ YLKK++ E+P+ + + ++ EK + +I + LL IH
Sbjct: 348 TIRAVLNSNYLKKKVEGYYEVPYYPLKKHEFVLSTEKTGRRALDIGKYLLDFGIHSPTV- 406
Query: 415 GKHFPEL-GESALFAATETTRKE----WVDALISALR 446
+FP + E+ + TET K+ + D LISAL+
Sbjct: 407 --YFPLIVKEAMMIEPTETVSKDDLDRYADVLISALK 441
>gb|AAK41199.1| Glycine dehydrogenase subunit 2 [Sulfolobus solfataricus]
Length = 508
Score = 89.7 bits (219), Expect = 6e-17
Identities = 102/394 (25%), Positives = 169/394 (42%), Gaps = 54/394 (13%)
Query: 85 VKYLIERSEFLTAYTPYQPEIS-----QGMLQALFEYQSLIAELVGLPVVNASMYDWGTA 139
+KY + E TA T + + QG+L+ ++E Q+ +E+ G+ + +
Sbjct: 88 MKYNPKIEEKATAITEFHHPLEDEDYIQGILEMIYELQNWFSEITGMDECSLQVPAGSAG 147
Query: 140 MAEAALMTVRLH----RGKRKKFIVPRHTHPERLQVLETYAKGPGVEIETVKWNERGQVD 195
LM + H R + +V H A G ++ VK N G VD
Sbjct: 148 EFAGVLMIKKYHEEHNRNYKDTILVADTAHGTN----PASAAMAGYKVMYVKSNAEGLVD 203
Query: 196 IEDLKEKVKD-AAGVYVEIPNFFGLLEEEVREIGEIAHEAGA--YFVVGVDPTILGIVEA 252
++ L+E V D AG + PN GL EE + EI +I H A Y+ +LGI
Sbjct: 204 MDILREIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSTNAVLYYDGANLNGVLGIAR- 262
Query: 253 PGELGADIV-VGEASYFGNPMNFGGPRAGIFAVRNDM------KLIRQMPGR--LIGMTK 303
PG++G DIV + F P GGP AG + ++ ++ ++ G+ L + K
Sbjct: 263 PGDMGFDIVHLNLHKTFAVPHGGGGPGAGAICAKGELVNYLPYPMVEKVNGKYKLSKIPK 322
Query: 304 DAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVILK 363
++ GK + T ++ R+ A +I LGP+GI+ +G++
Sbjct: 323 NSIGK---IATFYGNVGNLARSFA-----------------YILGLGPQGIQMIGKMSTL 362
Query: 364 NTAYLKKRLSEVAEIPFDGVN--FKDVLVRFEKPYKEIH----EELLKRNIHGGYYVGK- 416
T YL +L +V E+ N K +V K E + ++ K + G+Y
Sbjct: 363 ATNYLIAKLRDVKELELIAPNRHRKHEVVFSVKQLMENYGVSANDVAKALLDNGFYAPTI 422
Query: 417 HFPELGESAL-FAATETTRKEWVDALISALREVI 449
+FP + E AL TET KE +D L++++
Sbjct: 423 YFPPIVEEALMIEPTETETKETLDMFAETLKKIV 456
>gb|AAB97081.1| (AF042072) glycine decarboxylase P subunit [Coffea arabica]
>gi|2827422|gb|AAB99846.1| (AF043099) glycine
decarboxylase multi-enzyme complex P subunit [Coffea
eugenioides]
Length = 142
Score = 88.5 bits (216), Expect = 1e-16
Identities = 55/142 (38%), Positives = 81/142 (56%), Gaps = 11/142 (7%)
Query: 8 NSAHKEEMLKEI---GLSSIDELF-ADIPGKFIRDELNLP---EGKSEYEVFLEMNEILG 60
NSA EE +K + G S+D L A +P D + EG +E ++ M ++
Sbjct: 4 NSATPEEQIKMVENCGFPSLDSLIDATVPKSIRLDGMTFSKFDEGLTEAQMIDHMQKLAS 63
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +++G G Y ++P + + L+E + T YTPYQ EISQG L++L YQ++
Sbjct: 64 KNKV---FKSYIGMGYYNTFVPPVILRNLLENPAWYTQYTPYQAEISQGRLESLLNYQTM 120
Query: 120 IAELVGLPVVNASMYDWGTAMA 141
IA+L GLP+ NAS+ D GTA A
Sbjct: 121 IADLTGLPMSNASLLDEGTAAA 142
>gb|AAB99844.1| (AF043097) glycine decarboxylase multi-enzyme complex P subunit
[Coffea canephora]
Length = 142
Score = 88.5 bits (216), Expect = 1e-16
Identities = 55/142 (38%), Positives = 81/142 (56%), Gaps = 11/142 (7%)
Query: 8 NSAHKEEMLKEI---GLSSIDELF-ADIPGKFIRDELNLP---EGKSEYEVFLEMNEILG 60
NSA EE +K + G S+D L A +P D + EG +E ++ M ++
Sbjct: 4 NSATPEEQIKMVENCGFPSLDSLIDATVPKSIRLDGMTFSKFDEGLTEAQMIDHMEKLAS 63
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +++G G Y ++P + + L+E + T YTPYQ EISQG L++L YQ++
Sbjct: 64 KNKV---FKSYIGMGYYNTFVPPVILRNLLENPAWYTQYTPYQAEISQGRLESLLNYQTM 120
Query: 120 IAELVGLPVVNASMYDWGTAMA 141
IA+L GLP+ NAS+ D GTA A
Sbjct: 121 IADLTGLPMSNASLLDEGTAAA 142
>gb|AAB99845.1| (AF043098) glycine decarboxylase multi-enzyme complex P subunit
[Coffea congensis]
Length = 142
Score = 88.5 bits (216), Expect = 1e-16
Identities = 55/142 (38%), Positives = 81/142 (56%), Gaps = 11/142 (7%)
Query: 8 NSAHKEEMLKEI---GLSSIDELF-ADIPGKFIRDELNLP---EGKSEYEVFLEMNEILG 60
NSA EE +K + G S+D L A +P D + EG +E ++ M ++
Sbjct: 4 NSATPEEQIKMVENCGFPSLDSLIDATVPKSIRLDGMTFSKFDEGLTEAQMIDHMEKLAS 63
Query: 61 KNKTVLEMPTFLGAGTYFHYIPAHV-KYLIERSEFLTAYTPYQPEISQGMLQALFEYQSL 119
KNK +++G G Y ++P + + L+E + T YTPYQ EISQG L++L YQ++
Sbjct: 64 KNKV---FKSYIGMGYYNTFVPPVILRNLLENPAWYTQYTPYQAEISQGRLESLLNYQTM 120
Query: 120 IAELVGLPVVNASMYDWGTAMA 141
IA+L GLP+ NAS+ D GTA A
Sbjct: 121 IADLTGLPMSNASLLDEGTAAA 142
>pir||H70463 glycine dehydrogenase (decarboxylating) - Aquifex aeolicus
>gi|2984168|gb|AAC07701.1| (AE000762) glycine
dehydrogenase (decarboxylating) [Aquifex aeolicus]
Length = 482
Score = 87.8 bits (214), Expect = 2e-16
Identities = 103/434 (23%), Positives = 187/434 (42%), Gaps = 37/434 (8%)
Query: 31 IPGKFIRDELNLPEGKSEYEVFLEMNEILGKNKTVLEMPTFLGAGTYFHYIPAHVKYLIE 90
+P +++R+EL+ PE SE +V + N V LG+ T Y P + L+
Sbjct: 31 LPEEYLREELDFPE-VSELDVVRHYTNLSHLNYAVDTTMVPLGSCT-MKYNPRINEELVN 88
Query: 91 RSEFLTAYTPYQPEISQGMLQALFEYQSLIAELVGLPVVNASMYDWGTAMAEAALMTVRL 150
+ EFL + E Q +L+ ++E + L+ EL G V+ L+
Sbjct: 89 KKEFLNVHPLTPEEYIQPLLKLVYELKELLKELGGFAEVSLQPAAGAHGELLGLLLIHAY 148
Query: 151 H--RGKRKK--FIVPRHTHPERLQVLETYAKGPGVEIETVKWNERGQVDIEDLKEKVKD- 205
H RG ++K ++P H A G +I+ VK +++G++D ED +K+ +
Sbjct: 149 HQDRGNKEKKVVLIPDSAHGTN----PASAAICGFDIKVVKSDKKGELDFEDFIKKLDER 204
Query: 206 AAGVYVEIPNFFGLLEEEVREIGEIAHEAGA-YFVVGVDPTILGIVEAPGELGADIV-VG 263
A + + PN G+ E +++EI E H+ A ++ G + L PGE G D++
Sbjct: 205 VAALMITNPNTLGIFERKIKEIAEELHKRDALLYMDGANFNALVGRFKPGEWGVDVMHFN 264
Query: 264 EASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTKDAEGKRAFVMTLQTREQHIR 323
F P GGP AG V +K +P + +GK+ ++ +I
Sbjct: 265 LHKTFSTPHGGGGPGAGPVGVSERLKPYLPVP------QIEYDGKKYYL------NWNIE 312
Query: 324 RAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVILKNTAYLKKRLSEVAEIPF--- 380
++ LV + A +I + G + I+++ E + N YLK L V + P+
Sbjct: 313 KSVGKILAFHGHFLVWLKALAYILTYG-KDIKKVSEYAVLNARYLKHLLKGVFKDPYPES 371
Query: 381 ----DGVNFKDVLVRFEKPYKEIHEELLKRNIHGGYYVGKHFPEL-GESALFAATETTRK 435
+ V L ++ ++ + +L +G Y +FP + E+ + TET
Sbjct: 372 PCMHEFVLSATNLTKYGVRASDVAKRILD---YGFYAPTMYFPLIVREALMIEPTETENP 428
Query: 436 EWVDALISALREVI 449
+ + LR+++
Sbjct: 429 DTLKKFALILRKIV 442
>pir||D72518 probable glycine dehydrogenase subunit 2 APE2121 - Aeropyrum pernix
(strain K1) >gi|5105820|dbj|BAA81132.1| (AP000063) 521aa
long hypothetical glycine dehydrogenase subunit 2
[Aeropyrum pernix]
Length = 521
Score = 84.7 bits (206), Expect = 2e-15
Identities = 124/462 (26%), Positives = 189/462 (40%), Gaps = 50/462 (10%)
Query: 13 EEMLKEIGLSSIDELFADIPGKFIRDELNLPEGKSEYEVFLEMNEILGKNKTVLEMPTFL 72
E+++KE+G + + A +LPE SE EV + V P L
Sbjct: 31 EKVVKEVGPLKLPQSLAR------GSPPSLPE-VSEVEVVRHYTRLSQMAYGVDNGPVPL 83
Query: 73 GAGTYFHYIPAHVKYLIERSEFLTAYTPYQPEISQGMLQALFEYQSLIAELVGLPVVNAS 132
G+ T Y P L T + E QG+L+A++ Q + + G+
Sbjct: 84 GSCT-MKYNPRVAARLAFDPRLETLHPLQDDETVQGVLEAIYMVQEWLRHITGMDACTVH 142
Query: 133 MYDWGTAMAEAALMTVRLH--RG---KRKKFIVPRHTHPERLQVLETYAKGPGVEIETVK 187
LM R H RG KR+ IVP H A G ++ V
Sbjct: 143 PAAGSQGELAGVLMIKRFHEMRGDLDKRRVIIVPDSAHGTN----PASAAMGGFQVVEVP 198
Query: 188 WNERGQVDIEDLKEKVK-DAAGVYVEIPNFFGLLEEEVREIGEIAHEAGAYFVVGVDPTI 246
+ G VD+E LK V D AG+ + P+ GL EE + EI + HEAG +
Sbjct: 199 TGDDGNVDMEALKAAVGGDTAGLMITNPSTLGLFEENILEISRLVHEAGGLLYYD-GANL 257
Query: 247 LGIV--EAPGELGADIV-VGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTK 303
GI+ PG++ DI V F P GGP +G V K + + G + +
Sbjct: 258 NGIIGRARPGDMEFDIAHVNLHKTFSVPHGGGGPGSGPVCV----KRVEVVDG--VTLED 311
Query: 304 DAEGKRAFVMTLQTREQHIRRAKATS--NICSNEALVAVAAAI-----HIASLGPRGIRE 356
G R + +RE+ + R + ++ A +A A+ +I ++GP+G+R
Sbjct: 312 LLPGPR----VVYSREEGLYRVRPPGRWSVGRLRAWIANTLAVLWAYAYILAMGPQGLRL 367
Query: 357 LGEVILKNTAYLKKRLSE---VAEIPF-DGVNFKDVLVRFEKPYKE----IHEELLKRNI 408
GEV + NT Y RL E +P+ K +V KP K E++ K +
Sbjct: 368 AGEVSVVNTNYF-IRLMEGHWGYSLPYAPSRPRKHEVVLSAKPLKRETGATAEDVAKGLL 426
Query: 409 HGGYYVGK-HFPELGESALFAA-TETTRKEWVDALISALREV 448
G Y +FP + E AL TE+ KE ++A + L+E+
Sbjct: 427 DAGLYAPTIYFPLIVEEALMIEFTESETKENIEAYAARLKEI 468
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.138 0.397
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166853912
Number of Sequences: 2977
Number of extensions: 7347028
Number of successful extensions: 19858
Number of sequences better than 1.0e-10: 54
Number of HSP's better than 0.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 19634
Number of HSP's gapped (non-prelim): 84
length of query: 449
length of database: 189,106,746
effective HSP length: 57
effective length of query: 392
effective length of database: 154,992,987
effective search space: 60757250904
effective search space used: 60757250904
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 166 (69.1 bits)