BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1172 (gcs2) DE:PROBABLE GLYCINE DEHYDROGENASE
(DECARBOXYLATING) SUBUNIT 2 (EC 1.4.4.2) (GLYCINE DECARBOXYLASE)
(GLYCINE CLEAVAGE SYSTEM P- PROTEIN).
(502 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75030 probable glycine dehydrogenase (decarboxylating) (EC... 1025 0.0
pir||B71216 probable glycine dehydrogenase subunit 2 - Pyrococcu... 991 0.0
dbj|BAB06533.1| (AP001516) glycine dehydrogenase subunit 2 [Baci... 586 e-166
pir||H72403 glycine dehydrogenase (decarboxylating) subunit 2 - ... 586 e-166
sp|P54377|GCS2_BACSU PROBABLE GLYCINE DEHYDROGENASE [DECARBOXYLA... 585 e-166
emb|CAC12478.1| (AL445067) glycine dehydrogenase (decarboxylatin... 545 e-154
pir||D72518 probable glycine dehydrogenase subunit 2 APE2121 - A... 534 e-151
gb|AAK41199.1| Glycine dehydrogenase subunit 2 [Sulfolobus solfa... 506 e-142
pir||H70463 glycine dehydrogenase (decarboxylating) - Aquifex ae... 491 e-138
gb|AAG19867.1| (AE005071) glycine dehydrogenase subunit 2; GcvP2... 459 e-128
pir||E75352 glycine cleavage system P protein - Deinococcus radi... 340 2e-92
pir||T16734 hypothetical protein R12C12.1 - Caenorhabditis elega... 340 3e-92
pir||S76257 hypothetical protein - Synechocystis sp. (strain PCC... 333 2e-90
sp|O49850|GCSP_FLAAN GLYCINE DEHYDROGENASE [DECARBOXYLATING], MI... 327 2e-88
gb|AAD56281.1|AF137264_1 (AF137264) glycine decarboxylase p prot... 326 3e-88
sp|O49954|GCSP_SOLTU GLYCINE DEHYDROGENASE [DECARBOXYLATING], MI... 326 3e-88
pir||T02615 probable glycine dehydrogenase (decarboxylating) (EC... 326 3e-88
pir||A39521 glycine dehydrogenase (decarboxylating) (EC 1.4.4.2)... 326 5e-88
sp|P15505|GCSP_CHICK GLYCINE DEHYDROGENASE [DECARBOXYLATING], MI... 326 5e-88
pir||S40216 P protein - Flaveria pringlei >gi|438003|emb|CAA8107... 326 5e-88
sp|P49361|GCSA_FLAPR GLYCINE DEHYDROGENASE [DECARBOXYLATING] A, ... 326 5e-88
sp|P49362|GCSB_FLAPR GLYCINE DEHYDROGENASE [DECARBOXYLATING] B, ... 326 5e-88
pir||D83339 glycine cleavage system protein P2 PA2445 [imported]... 324 1e-87
gb|AAF54512.1| (AE003686) CG3999 gene product [Drosophila melano... 324 2e-87
sp|O49852|GCSP_FLATR GLYCINE DEHYDROGENASE [DECARBOXYLATING], MI... 323 3e-87
pir||E82994 glycine cleavage system protein P1 PA5213 [imported]... 323 4e-87
pir||T46636 glycine dehydrogenase (decarboxylating) (EC 1.4.4.2)... 322 7e-87
gb|AAA63798.1| (U11693) victorin binding protein [Avena sativa] 321 9e-87
pir||T05309 probable glycine dehydrogenase (decarboxylating) (EC... 319 3e-86
sp|P26969|GCSP_PEA GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITO... 319 4e-86
pir||C82687 glycine decarboxylase XF1385 [imported] - Xylella fa... 318 8e-86
gi|4504013 glycine dehydrogenase (decarboxylating; glycine decar... 312 4e-84
sp|P23378|GCSP_HUMAN GLYCINE DEHYDROGENASE [DECARBOXYLATING], MI... 312 6e-84
sp|P33195|GCSP_ECOLI GLYCINE DEHYDROGENASE [DECARBOXYLATING] (GL... 312 6e-84
gb|AAA69071.1| (U28377) ORF_f957 [Escherichia coli] 312 6e-84
sp|Q09785|GCSP_SCHPO PUTATIVE GLYCINE DEHYDROGENASE [DECARBOXYLA... 312 8e-84
gi|6323843 Glycine decarboxylase complex (P-subunit), glycine sy... 311 1e-83
pir||S70896 aminomethyltransferase (EC 2.1.2.10) - yeast (Saccha... 311 1e-83
pir||T44754 probable glycine dehydrogenase (decarboxylating) (EC... 311 1e-83
sp|Q50601|GCSP_MYCTU PROBABLE GLYCINE DEHYDROGENASE [DECARBOXYLA... 308 1e-82
pir||D81821 glycine dehydrogenase (decarboxylating) (EC 1.4.4.2)... 304 1e-81
emb|CAA72255.1| (Y11467) putative glycine dehydrogenase [Thermus... 159 5e-38
pir||C71216 probable glycine dehydrogenase subunit 1 - Pyrococcu... 108 2e-22
pir||E75030 probable glycine dehydrogenase (decarboxylating) (EC... 102 9e-21
sp|P54376|GCS1_BACSU PROBABLE GLYCINE DEHYDROGENASE [DECARBOXYLA... 96 9e-19
pir||G72403 glycine dehydrogenase (decarboxylating) subunit 1 - ... 85 2e-15
dbj|BAB06534.1| (AP001516) glycine dehydrogenase subunit 1 [Baci... 84 4e-15
pir||G72518 probable glycine dehydrogenase subunit 1 APE2124 - A... 82 2e-14
gb|AAD33990.1|AF147718_1 (AF147718) glycine decarboxylase [Rattu... 72 1e-11
>pir||D75030 probable glycine dehydrogenase (decarboxylating) (EC 1.4.4.2) chain
2 PAB1172 - Pyrococcus abyssi (strain Orsay)
>gi|5459196|emb|CAB50682.1| (AJ248288) PROBABLE GLYCINE
DEHYDROGENASE (DECARBOXYLATING SUBUNIT 2 (EC 1.4.4.2)
(GLYCINE DECARBOXYLASE) GLYCINE CLEAVAGE SYSTEM
P-PROTEIN). [Pyrococcus abyssi]
Length = 502
Score = 1025 bits (2622), Expect = 0.0
Identities = 502/502 (100%), Positives = 502/502 (100%)
Query: 1 MYRQAKWDEPLIFELSRPGRVGYTLPKPIEDVDVEIPEKLKRKSPLNLPEVSEPEVVKHY 60
MYRQAKWDEPLIFELSRPGRVGYTLPKPIEDVDVEIPEKLKRKSPLNLPEVSEPEVVKHY
Sbjct: 1 MYRQAKWDEPLIFELSRPGRVGYTLPKPIEDVDVEIPEKLKRKSPLNLPEVSEPEVVKHY 60
Query: 61 TRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWEL 120
TRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWEL
Sbjct: 61 TRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWEL 120
Query: 121 EQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASA 180
EQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASA
Sbjct: 121 EQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASA 180
Query: 181 AMAGFKVIEIPSNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAG 240
AMAGFKVIEIPSNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAG
Sbjct: 181 AMAGFKVIEIPSNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAG 240
Query: 241 GLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLP 300
GLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLP
Sbjct: 241 GLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLP 300
Query: 301 VPLVSYDEENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREVSEVAVL 360
VPLVSYDEENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREVSEVAVL
Sbjct: 301 VPLVSYDEENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREVSEVAVL 360
Query: 361 NANYLARKLKGTRGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIY 420
NANYLARKLKGTRGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIY
Sbjct: 361 NANYLARKLKGTRGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIY 420
Query: 421 FPLIVHEALMIEPTETVSKEELDAYVEAMKKISEEAYTNPEVVKSAPHNTAVRRVDDVLA 480
FPLIVHEALMIEPTETVSKEELDAYVEAMKKISEEAYTNPEVVKSAPHNTAVRRVDDVLA
Sbjct: 421 FPLIVHEALMIEPTETVSKEELDAYVEAMKKISEEAYTNPEVVKSAPHNTAVRRVDDVLA 480
Query: 481 SKKPIITWKMYKELKEKGEVDY 502
SKKPIITWKMYKELKEKGEVDY
Sbjct: 481 SKKPIITWKMYKELKEKGEVDY 502
>pir||B71216 probable glycine dehydrogenase subunit 2 - Pyrococcus horikoshii
>gi|3258438|dbj|BAA31121.1| (AP000007) 502aa long
hypothetical glycine dehydrogenase subunit 2 [Pyrococcus
horikoshii]
Length = 502
Score = 991 bits (2535), Expect = 0.0
Identities = 476/502 (94%), Positives = 497/502 (98%)
Query: 1 MYRQAKWDEPLIFELSRPGRVGYTLPKPIEDVDVEIPEKLKRKSPLNLPEVSEPEVVKHY 60
MYRQA+WDEPLIFELSRPGRVGYTLPKPIEDV VEIPEKLKRK+PL LPEVSEPEVVKHY
Sbjct: 1 MYRQARWDEPLIFELSRPGRVGYTLPKPIEDVKVEIPEKLKRKTPLELPEVSEPEVVKHY 60
Query: 61 TRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWEL 120
TRLSEMNYGVDSGIYPLGSCTMKYNPKINEE+A HPKVA+IHPYQDERTVQGAL+IMWEL
Sbjct: 61 TRLSEMNYGVDSGIYPLGSCTMKYNPKINEEIANHPKVAFIHPYQDERTVQGALKIMWEL 120
Query: 121 EQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASA 180
EQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRG+TQR E+LVPDSAHGTNPASA
Sbjct: 121 EQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGDTQRTEILVPDSAHGTNPASA 180
Query: 181 AMAGFKVIEIPSNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAG 240
+MAGFKV+EIPSNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHK G
Sbjct: 181 SMAGFKVVEIPSNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKVG 240
Query: 241 GLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLP 300
GLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLP
Sbjct: 241 GLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLP 300
Query: 301 VPLVSYDEENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREVSEVAVL 360
VPLVSYDEENDRYYLDY+VPKSIGKVKELFGNFAVLV+ALTYLK+MGK+GLREVSEVAVL
Sbjct: 301 VPLVSYDEENDRYYLDYNVPKSIGKVKELFGNFAVLVKALTYLKIMGKEGLREVSEVAVL 360
Query: 361 NANYLARKLKGTRGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIY 420
NANYLARKLKGTRGYELPHKELRKHEVVFSAEPMK+ETGVRTLDVAKRLLDFG+HAPTIY
Sbjct: 361 NANYLARKLKGTRGYELPHKELRKHEVVFSAEPMKKETGVRTLDVAKRLLDFGLHAPTIY 420
Query: 421 FPLIVHEALMIEPTETVSKEELDAYVEAMKKISEEAYTNPEVVKSAPHNTAVRRVDDVLA 480
FPLIVHEALMIEPTE+VSKEELDAYVEA+KKISEEAYTNPE+VKSAPHNTAVRRVDDVLA
Sbjct: 421 FPLIVHEALMIEPTESVSKEELDAYVEALKKISEEAYTNPEIVKSAPHNTAVRRVDDVLA 480
Query: 481 SKKPIITWKMYKELKEKGEVDY 502
+KKP+ITWKMYKELKEKGE+DY
Sbjct: 481 AKKPVITWKMYKELKEKGEIDY 502
>dbj|BAB06533.1| (AP001516) glycine dehydrogenase subunit 2 [Bacillus halodurans]
Length = 488
Score = 586 bits (1495), Expect = e-166
Identities = 293/485 (60%), Positives = 368/485 (75%), Gaps = 8/485 (1%)
Query: 8 DEPLIFELSRPGRVGYTLPKPI---EDVDVEIPEKLKRKSPLNLPEVSEPEVVKHYTRLS 64
D+ LIFELS+PGRVG++LP+ + V+ IP + R+ LPEVSE ++++HYT LS
Sbjct: 5 DQALIFELSKPGRVGHSLPELDVLEQPVETLIPAEFLREEAPELPEVSELQLMRHYTALS 64
Query: 65 EMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWL 124
+ N+GVDSG YPLGSCTMKYNPKINE++A +P A IHPYQ E VQGALR+M+EL+ L
Sbjct: 65 KRNHGVDSGFYPLGSCTMKYNPKINEDVARYPGFANIHPYQPEAQVQGALRLMYELQTAL 124
Query: 125 KEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAG 184
EITGMD TLQPAAGA GE+TG+M+I+AYH G+T R +++VPDSAHGTNPASA +AG
Sbjct: 125 AEITGMDEVTLQPAAGAQGEWTGLMLIRAYHEANGDTNRTKVIVPDSAHGTNPASATVAG 184
Query: 185 FKVIEIPSNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLY 244
F+ + + ++E+G VDL+ L V E TA LMLTNPNTLG+FE I E+A I+H+AGG LY
Sbjct: 185 FESVTVRTDEDGLVDLDHLREVVGEDTAALMLTNPNTLGLFEAHIVEMAAIIHEAGGKLY 244
Query: 245 YDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPLV 304
YDGAN N ILG RPGDMGFD+VHLNLHKTF+ PHGGGGPG+GPVGVK+ L YLP P+V
Sbjct: 245 YDGANSNAILGIARPGDMGFDVVHLNLHKTFTGPHGGGGPGSGPVGVKKELIPYLPKPVV 304
Query: 305 SYDEENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREVSEVAVLNANY 364
D D Y LDYD P SIG+VK +GNF + VRA TY++ MG +GLR VSE AVLNANY
Sbjct: 305 VKD--GDSYRLDYDRPHSIGRVKPYYGNFGINVRAYTYIRTMGPEGLRTVSEYAVLNANY 362
Query: 365 LARKLKGTRGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLI 424
+ R+L ++LP+ + KHE V S K+ GVRTLD+AKRLLDFG H PTIYFPL
Sbjct: 363 MMRRL--APYFDLPYDQHCKHEFVLSGRQQKK-LGVRTLDIAKRLLDFGYHPPTIYFPLN 419
Query: 425 VHEALMIEPTETVSKEELDAYVEAMKKISEEAYTNPEVVKSAPHNTAVRRVDDVLASKKP 484
V E LMIEPTET SKE LD ++EAM +I++EA PEVV+ APH+T + R+D+ A++KP
Sbjct: 420 VEECLMIEPTETESKETLDEFIEAMIQIAKEAEETPEVVQEAPHHTVIGRLDETTAARKP 479
Query: 485 IITWK 489
I+ ++
Sbjct: 480 ILRYE 484
>pir||H72403 glycine dehydrogenase (decarboxylating) subunit 2 - Thermotoga
maritima (strain MSB8)
>gi|4980712|gb|AAD35306.1|AE001706_5 (AE001706) glycine
dehydrogenase (decarboxylating) subunit 2 [Thermotoga
maritima]
Length = 474
Score = 586 bits (1494), Expect = e-166
Identities = 287/478 (60%), Positives = 369/478 (77%), Gaps = 7/478 (1%)
Query: 12 IFELSRPGRVGYTLPKPIEDVDVEIPEKLKRKSPLNLPEVSEPEVVKHYTRLSEMNYGVD 71
IFE S+ GR + LP+ + + +P++ R++P LPEVSEP++V+HYT L+ NY VD
Sbjct: 3 IFERSKKGRKAFRLPES-DIPEYSLPDRFLRRTPPELPEVSEPDLVRHYTNLARKNYSVD 61
Query: 72 SGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKEITGMD 131
GIYPLGSCTMKYNPK+NE+ A IHPYQ TVQG+LR+M+EL++ L EITGMD
Sbjct: 62 LGIYPLGSCTMKYNPKLNEKAANLEGFREIHPYQPVETVQGSLRLMYELKKMLCEITGMD 121
Query: 132 RFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFKVIEIP 191
TLQPAAGA+GE TG++I++ Y +RG+T R ++LVPDSAHGTNPASA+M GF+V+EI
Sbjct: 122 DMTLQPAAGAHGELTGMLIVREYFKNRGDTGRKKVLVPDSAHGTNPASASMVGFEVVEIK 181
Query: 192 SNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLN 251
S +NG VD+E L+ + E A +MLTNPNTLG+FE +I +IA++ H+ G LLYYDGANLN
Sbjct: 182 S-KNGMVDVEDLKKLLDEEVAAVMLTNPNTLGLFEKDILKIAEMTHECGALLYYDGANLN 240
Query: 252 GILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPLVSYDEEND 311
I+GKVRPGDMGFDIVHLNLHKTFSTPHG GGPG+GPVGVK+ L D+LP P V ++N
Sbjct: 241 AIMGKVRPGDMGFDIVHLNLHKTFSTPHGMGGPGSGPVGVKKHLVDFLPFPQV---KKNG 297
Query: 312 RYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREVSEVAVLNANYLARKLKG 371
Y + K+IG+V+ FGNF VLV+A TY+ MG+DGL VSE+AVLNANYL +K++
Sbjct: 298 ELYELFVPEKTIGRVRSFFGNFPVLVKAYTYILTMGRDGLERVSEMAVLNANYLKKKIE- 356
Query: 372 TRGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLIVHEALMI 431
+ E+P+ HE V SAE + RETGVRTLD+AKR+LDFG+H PT+YFPLIV EALMI
Sbjct: 357 -KFLEIPYNGFCMHEFVASAEKVFRETGVRTLDIAKRILDFGVHPPTVYFPLIVPEALMI 415
Query: 432 EPTETVSKEELDAYVEAMKKISEEAYTNPEVVKSAPHNTAVRRVDDVLASKKPIITWK 489
EPTET +KE LD Y E ++++ +EAY NP+ +K+APHNT VRRV++VLASKKP+ W+
Sbjct: 416 EPTETENKETLDKYAEILERVVKEAYENPDALKNAPHNTPVRRVNEVLASKKPVFRWR 473
>sp|P54377|GCS2_BACSU PROBABLE GLYCINE DEHYDROGENASE [DECARBOXYLATING] SUBUNIT 2 (GLYCINE
DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM P-PROTEIN)
>gi|7451546|pir||B69959 glycine dehydrogenase homolog
yqhK - Bacillus subtilis >gi|1303892|dbj|BAA12548.1|
(D84432) YqhK [Bacillus subtilis]
>gi|2634889|emb|CAB14386.1| (Z99116) similar to glycine
dehydrogenase [Bacillus subtilis]
Length = 488
Score = 585 bits (1493), Expect = e-166
Identities = 289/486 (59%), Positives = 376/486 (76%), Gaps = 10/486 (2%)
Query: 8 DEPLIFELSRPGRVGYTLPKPIEDVDVEIPEKLK----RKSPLNLPEVSEPEVVKHYTRL 63
D+ LIFELSR GR+GY+LP+ ++ ++E+ + L R LPEVSE ++++HYT L
Sbjct: 5 DQALIFELSREGRIGYSLPE-LDVPEIELGDLLSDTYIRDEDAALPEVSELDIMRHYTAL 63
Query: 64 SEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQW 123
S+ N+GVDSG YPLGSCTMKYNPKINE++A P A IHP QDE TVQGAL ++++L +
Sbjct: 64 SKRNHGVDSGFYPLGSCTMKYNPKINEKIARIPGFAAIHPLQDEDTVQGALELLYDLSKH 123
Query: 124 LKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMA 183
L+EITGMD TLQPAAGA+GE+TG+M+I+AYH RG+ +R +++VPDSAHGTNPASA +A
Sbjct: 124 LEEITGMDEVTLQPAAGAHGEWTGLMMIRAYHEARGDFKRTKVIVPDSAHGTNPASATVA 183
Query: 184 GFKVIEIPSNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLL 243
GF+ + + SNE G VDLE L+ AV+E TA LMLTNPNTLG+FE++I E+A+IVH+AGG L
Sbjct: 184 GFETVTVKSNEKGLVDLEDLKRAVNEETAALMLTNPNTLGLFEEQITEMAEIVHQAGGKL 243
Query: 244 YYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPL 303
YYDGANLN +L K RPGDMGFD+VHLNLHKTF+ PHGGGGPG+GPVGVK+ L YLP P+
Sbjct: 244 YYDGANLNAVLSKARPGDMGFDVVHLNLHKTFTGPHGGGGPGSGPVGVKQDLIPYLPKPV 303
Query: 304 VSYDEENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREVSEVAVLNAN 363
+ ++ R+ DYD P +IG+VK +GNF + VRA TY++ MG DGL+ V+E AVLNAN
Sbjct: 304 LV--KKEGRFTFDYDRPHAIGRVKPYYGNFGINVRAYTYIRSMGPDGLKAVTENAVLNAN 361
Query: 364 YLARKLKGTRGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPL 423
Y+ RKL Y+LP KHE V S + K+ GVRTLD+AKRLLDFG H PTIYFPL
Sbjct: 362 YMMRKL--APYYDLPFDRHCKHEFVLSGKRQKK-LGVRTLDIAKRLLDFGYHPPTIYFPL 418
Query: 424 IVHEALMIEPTETVSKEELDAYVEAMKKISEEAYTNPEVVKSAPHNTAVRRVDDVLASKK 483
V E +MIEPTET SKE LDA+++AM +I++EA NPE+V+ APH T V+R+D+ A++
Sbjct: 419 NVEECIMIEPTETESKETLDAFIDAMIQIAKEAEENPELVQEAPHTTIVKRMDETKAARH 478
Query: 484 PIITWK 489
P++ ++
Sbjct: 479 PVLRYE 484
>emb|CAC12478.1| (AL445067) glycine dehydrogenase (decarboxylating) related protein,
subunit 2 [Thermoplasma acidophilum]
Length = 472
Score = 545 bits (1390), Expect = e-154
Identities = 281/490 (57%), Positives = 356/490 (72%), Gaps = 23/490 (4%)
Query: 2 YRQAKWDEPLIFELSRPGRVGYTLPKPIEDVDVEIPEKLKRKSPLNLPEVSEPEVVKHYT 61
+RQA +DEPLI ++ T K EDVD + + R++ L LP+VSE +VV+HYT
Sbjct: 3 FRQAYYDEPLIKDIKSD-----TSFKLSEDVDENLLPQDMRRTDLKLPQVSEVDVVRHYT 57
Query: 62 RLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELE 121
RLS+MNY VD GIYPLGSCTMKYNPK + +A + IHP+Q E TVQG L+IM+EL+
Sbjct: 58 RLSQMNYTVDVGIYPLGSCTMKYNPKYADRIASFAEFRNIHPFQPESTVQGTLQIMYELQ 117
Query: 122 QWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAA 181
++LK+I+ MD TLQP AGA+GEFTG++IIK Y D E R E++VPDSAHGTNPASA
Sbjct: 118 EFLKKISDMDAVTLQPMAGADGEFTGILIIKKYFEDLHE-DRTEIIVPDSAHGTNPASAT 176
Query: 182 MAGFKVIEIPSNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGG 241
M GF V+EIPSN G VDL AL+ A+S++TA LM+TNPNTLGIFE I EIAKI+H AG
Sbjct: 177 MGGFDVVEIPSNSEGMVDLNALKAAISKKTAALMITNPNTLGIFEQNITEIAKILHDAGA 236
Query: 242 LLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPV 301
LLYYDGANLN I G PG MGFDIVH NLHK+F+TPHGGGGPGAGPV VK FL D+LPV
Sbjct: 237 LLYYDGANLNAIFGITSPGLMGFDIVHFNLHKSFATPHGGGGPGAGPVAVKSFLSDFLPV 296
Query: 302 PLVSYDEENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREVSEVAVLN 361
P+V YD RY+LDY KSIG+V +G+F++L+RA +Y+ G DGL+ + AVLN
Sbjct: 297 PVVGYD--GKRYFLDYGKKKSIGRVSSFYGSFSILLRAWSYVIRNGDDGLKNATIRAVLN 354
Query: 362 ANYLARKLKGTRGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYF 421
+NYL +K++G YE+P+ L+KHE V S E +TG R LD+ K LLDFG+H+PT+YF
Sbjct: 355 SNYLKKKVEGY--YEVPYYPLKKHEFVLSTE----KTGRRALDIGKYLLDFGIHSPTVYF 408
Query: 422 PLIVHEALMIEPTETVSKEELDAYVEAM---KKISEEAYTNPEVVKSAPHNTAVRRVDDV 478
PLIV EA+MIEPTETVSK++LD Y + + K+ E+ +KS P NTAV R+D+V
Sbjct: 409 PLIVKEAMMIEPTETVSKDDLDRYADVLISALKVPEDD------LKSRPRNTAVSRIDEV 462
Query: 479 LASKKPIITW 488
A++ + W
Sbjct: 463 KAARDLKVRW 472
>pir||D72518 probable glycine dehydrogenase subunit 2 APE2121 - Aeropyrum pernix
(strain K1) >gi|5105820|dbj|BAA81132.1| (AP000063) 521aa
long hypothetical glycine dehydrogenase subunit 2
[Aeropyrum pernix]
Length = 521
Score = 534 bits (1361), Expect = e-151
Identities = 273/517 (52%), Positives = 364/517 (69%), Gaps = 18/517 (3%)
Query: 1 MYRQAKWDEPLIFELSRPGRVGYTLPKPIEDVDVEI-----PEKLKRKSPLNLPEVSEPE 55
++RQ++W+EPLI E+SR GR G P+P E V E+ P+ L R SP +LPEVSE E
Sbjct: 2 VWRQSRWNEPLITEMSRRGRRGALPPRPDEKVVKEVGPLKLPQSLARGSPPSLPEVSEVE 61
Query: 56 VVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALR 115
VV+HYTRLS+M YGVD+G PLGSCTMKYNP++ LA P++ +HP QD+ TVQG L
Sbjct: 62 VVRHYTRLSQMAYGVDNGPVPLGSCTMKYNPRVAARLAFDPRLETLHPLQDDETVQGVLE 121
Query: 116 IMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGET-QRNEMLVPDSAHG 174
++ +++WL+ ITGMD T+ PAAG+ GE GV++IK +H RG+ +R ++VPDSAHG
Sbjct: 122 AIYMVQEWLRHITGMDACTVHPAAGSQGELAGVLMIKRFHEMRGDLDKRRVIIVPDSAHG 181
Query: 175 TNPASAAMAGFKVIEIPSNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAK 234
TNPASAAM GF+V+E+P+ ++G VD+EAL+ AV TAGLM+TNP+TLG+FE+ I EI++
Sbjct: 182 TNPASAAMGGFQVVEVPTGDDGNVDMEALKAAVGGDTAGLMITNPSTLGLFEENILEISR 241
Query: 235 IVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEF 294
+VH+AGGLLYYDGANLNGI+G+ RPGDM FDI H+NLHKTFS PHGGGGPG+GPV VK
Sbjct: 242 LVHEAGGLLYYDGANLNGIIGRARPGDMEFDIAHVNLHKTFSVPHGGGGPGSGPVCVKRV 301
Query: 295 -------LKDYLPVPLVSYDEENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMG 347
L+D LP P V Y E Y + S+G+++ N ++ A Y+ MG
Sbjct: 302 EVVDGVTLEDLLPGPRVVYSREEGLYRVRPPGRWSVGRLRAWIANTLAVLWAYAYILAMG 361
Query: 348 KDGLREVSEVAVLNANYLARKLKGTRGYELPH--KELRKHEVVFSAEPMKRETGVRTLDV 405
GLR EV+V+N NY R ++G GY LP+ RKHEVV SA+P+KRETG DV
Sbjct: 362 PQGLRLAGEVSVVNTNYFIRLMEGHWGYSLPYAPSRPRKHEVVLSAKPLKRETGATAEDV 421
Query: 406 AKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEEAYTNPEVVKS 465
AK LLD G++APTIYFPLIV EALMIE TE+ +KE ++AY +K+I+EEA +P +
Sbjct: 422 AKGLLDAGLYAPTIYFPLIVEEALMIEFTESETKENIEAYAARLKEIAEEARRDPSTPRK 481
Query: 466 APHNTAVRRVDDVLASKKPII--TWKMYKELKEKGEV 500
P NT RVD+V A+ + TW++ + L+ +G++
Sbjct: 482 WPRNTTSARVDNVRANHPRTVTPTWRV-EVLRRQGKL 517
>gb|AAK41199.1| Glycine dehydrogenase subunit 2 [Sulfolobus solfataricus]
Length = 508
Score = 506 bits (1288), Expect = e-142
Identities = 261/512 (50%), Positives = 350/512 (67%), Gaps = 16/512 (3%)
Query: 1 MYRQAKWDEPLIFELSRPG--RVGYTLPKPIED----VDVEIPEKLKRKSPLNLPEVSEP 54
M+RQAKW+EPLIFEL++ G R G+ + K E +++IP+ L R++ +LP +SE
Sbjct: 1 MWRQAKWNEPLIFELNKSGAARQGFLINKDEEIRSQIKEMKIPKNLLRENEPDLPSLSEL 60
Query: 55 EVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGAL 114
EVV+H+ RLS+MN+GVD GI PLGSCTMKYNPKI E+ + + HP +DE +QG L
Sbjct: 61 EVVRHFVRLSQMNFGVDIGIMPLGSCTMKYNPKIEEKATAITE--FHHPLEDEDYIQGIL 118
Query: 115 RIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHG 174
+++EL+ W EITGMD +LQ AG+ GEF GV++IK YH + ++ +LV D+AHG
Sbjct: 119 EMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEEHNRNYKDTILVADTAHG 178
Query: 175 TNPASAAMAGFKVIEIPSNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAK 234
TNPASAAMAG+KV+ + SN G VD++ L V+++TAG MLTNPNTLG+FE+ I EI+K
Sbjct: 179 TNPASAAMAGYKVMYVKSNAEGLVDMDILREIVNDKTAGFMLTNPNTLGLFEENILEISK 238
Query: 235 IVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEF 294
I+H +LYYDGANLNG+LG RPGDMGFDIVHLNLHKTF+ PHGGGGPGAG + K
Sbjct: 239 IIHSTNAVLYYDGANLNGVLGIARPGDMGFDIVHLNLHKTFAVPHGGGGPGAGAICAKGE 298
Query: 295 LKDYLPVPLVSYDEENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREV 354
L +YLP P+V ++ N +Y L SIGK+ +GN L R+ Y+ +G G++ +
Sbjct: 299 LVNYLPYPMV--EKVNGKYKLSKIPKNSIGKIATFYGNVGNLARSFAYILGLGPQGIQMI 356
Query: 355 SEVAVLNANYLARKLKGTRGYEL--PHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDF 412
+++ L NYL KL+ + EL P++ RKHEVVFS + + GV DVAK LLD
Sbjct: 357 GKMSTLATNYLIAKLRDVKELELIAPNRH-RKHEVVFSVKQLMENYGVSANDVAKALLDN 415
Query: 413 GMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEEAYTNPEVVKSAPHNTAV 472
G +APTIYFP IV EALMIEPTET +KE LD + E +KKI +A NPE V +P+NT++
Sbjct: 416 GFYAPTIYFPPIVEEALMIEPTETETKETLDMFAETLKKIVNDAKINPEQVMKSPNNTSI 475
Query: 473 RRVDDVLASKKPIITWKMYK--ELKEKGEVDY 502
R+D A+ IT Y+ L+ G++DY
Sbjct: 476 ARLDQAYANHPSTIT-PTYRVLRLRRLGKIDY 506
>pir||H70463 glycine dehydrogenase (decarboxylating) - Aquifex aeolicus
>gi|2984168|gb|AAC07701.1| (AE000762) glycine
dehydrogenase (decarboxylating) [Aquifex aeolicus]
Length = 482
Score = 491 bits (1251), Expect = e-138
Identities = 250/487 (51%), Positives = 343/487 (70%), Gaps = 11/487 (2%)
Query: 11 LIFELSRPGRVGYTLPK-PIEDVDVE--IPEKLKRKSPLNLPEVSEPEVVKHYTRLSEMN 67
LIFE S+ GR GY LP+ +E+V+++ +PE+ R+ L+ PEVSE +VV+HYT LS +N
Sbjct: 3 LIFEKSKKGRKGYKLPELDVEEVNIKEYLPEEYLREE-LDFPEVSELDVVRHYTNLSHLN 61
Query: 68 YGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKEI 127
Y VD+ + PLGSCTMKYNP+INEEL + +HP E +Q L++++EL++ LKE+
Sbjct: 62 YAVDTTMVPLGSCTMKYNPRINEELVNKKEFLNVHPLTPEEYIQPLLKLVYELKELLKEL 121
Query: 128 TGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFKV 187
G +LQPAAGA+GE G+++I AYH DRG ++ +L+PDSAHGTNPASAA+ GF +
Sbjct: 122 GGFAEVSLQPAAGAHGELLGLLLIHAYHQDRGNKEKKVVLIPDSAHGTNPASAAICGFDI 181
Query: 188 IEIPSNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDG 247
+ S++ G +D E + ER A LM+TNPNTLGIFE +I+EIA+ +HK LLY DG
Sbjct: 182 KVVKSDKKGELDFEDFIKKLDERVAALMITNPNTLGIFERKIKEIAEELHKRDALLYMDG 241
Query: 248 ANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPLVSYD 307
AN N ++G+ +PG+ G D++H NLHKTFSTPHGGGGPGAGPVGV E LK YLPVP + YD
Sbjct: 242 ANFNALVGRFKPGEWGVDVMHFNLHKTFSTPHGGGGPGAGPVGVSERLKPYLPVPQIEYD 301
Query: 308 EENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREVSEVAVLNANYLAR 367
+YYL++++ KS+GK+ G+F V ++AL Y+ GKD +++VSE AVLNA YL
Sbjct: 302 --GKKYYLNWNIEKSVGKILAFHGHFLVWLKALAYILTYGKD-IKKVSEYAVLNARYLKH 358
Query: 368 KLKGTRGYELPHKELR-KHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLIVH 426
LKG ++ P+ E HE V SA + + GVR DVAKR+LD+G +APT+YFPLIV
Sbjct: 359 LLKGV--FKDPYPESPCMHEFVLSATNLTK-YGVRASDVAKRILDYGFYAPTMYFPLIVR 415
Query: 427 EALMIEPTETVSKEELDAYVEAMKKISEEAYTNPEVVKSAPHNTAVRRVDDVLASKKPII 486
EALMIEPTET + + L + ++KI +EA PE++K APH T VRR+ + A++ I+
Sbjct: 416 EALMIEPTETENPDTLKKFALILRKIVKEAKEKPEILKKAPHRTPVRRIKEAEANRNLIL 475
Query: 487 TWKMYKE 493
+K KE
Sbjct: 476 KFKDIKE 482
>gb|AAG19867.1| (AE005071) glycine dehydrogenase subunit 2; GcvP2 [Halobacterium
sp. NRC-1]
Length = 473
Score = 459 bits (1169), Expect = e-128
Identities = 241/457 (52%), Positives = 306/457 (66%), Gaps = 18/457 (3%)
Query: 32 VDVEIPEKLKRKSPLNLPEVSEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEE 91
VD +P+ L R + + LP + EPE+ +HY RLS+ NYGVDSG YPLGSCTMKYNP+ E+
Sbjct: 31 VDPSLPDDLTRDT-VELPSLEEPELARHYVRLSQQNYGVDSGPYPLGSCTMKYNPRFTED 89
Query: 92 LAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMII 151
A P A +HP + E +QG L +M +L+ +L I GMD TLQP AGA GEFTG++I
Sbjct: 90 AAALPAAA-VHPDRSETALQGTLAVMHDLQDYLGRIGGMDAVTLQPPAGAAGEFTGILIA 148
Query: 152 KAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFKVIEIPSNENGTVDLEALENAVSERT 211
+AYH RNE++VPD+AHGTN ASAA+ G+ VIE+PS ++G VDL+ALE A+ E T
Sbjct: 149 EAYHEATDGGHRNEVIVPDAAHGTNFASAALGGYDVIELPSGDDGRVDLDALEAALGENT 208
Query: 212 AGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNL 271
A LMLTNPNTLG+FE +IE IA++VH AGGLLYYDGANLN +LG+ RPGDMGFDI+H N+
Sbjct: 209 AALMLTNPNTLGLFERDIEPIAEMVHDAGGLLYYDGANLNALLGRARPGDMGFDIMHFNV 268
Query: 272 HKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPLVSYDEENDRYYLDYDVPKSIGKVKELFG 331
HKTF+TPHGGGGPGAGPVGV + L +LP P V D Y Y P+SIGKV G
Sbjct: 269 HKTFATPHGGGGPGAGPVGVTDELAGFLPDPHVRQSAGGD--YELYTPPRSIGKVHGFQG 326
Query: 332 NFAVLVRALTYLKVMGKDGLREVSEVAVLNANYLARKLKGTRGYELPHKELRKHEVVFSA 391
N+ VLV+A Y+ +G GL + S AVLNANYLA +L YE+P HE V SA
Sbjct: 327 NWPVLVKAFAYIDRLGDSGLADASAKAVLNANYLADQL----DYEIPLGPFH-HEFVASA 381
Query: 392 EPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKK 451
DVAKR+LD+G+H PT +P +V EALM EPTET SK LD +A
Sbjct: 382 GDQD------AADVAKRMLDYGVHPPTTKWPELVAEALMTEPTETESKRTLDDLADAFNA 435
Query: 452 ISEEAYTNPEVVKSAPHNTAVRRVDDVLASKKPIITW 488
++ + + + AP T RR+D A++ P ++W
Sbjct: 436 VAGD---DDAALADAPSRTTARRIDQTAAARNPRLSW 469
>pir||E75352 glycine cleavage system P protein - Deinococcus radiodurans
(strain R1) >gi|6459582|gb|AAF11360.1|AE002021_9
(AE002021) glycine cleavage system P protein
[Deinococcus radiodurans]
Length = 949
Score = 340 bits (864), Expect = 2e-92
Identities = 182/441 (41%), Positives = 269/441 (60%), Gaps = 27/441 (6%)
Query: 29 IEDVDVE----IPEKLKRKS-----PLNLPEVSEPEVVKHYTRLSEMNYGVDSGIYPLGS 79
++ +D E IP LKR+S P+ SE ++++ +L +Y + G+ PLGS
Sbjct: 441 VQKLDAEAVDGIPAPLKRQSDFLTHPVFNTHHSEHGMLRYLKQLENKDYSLTHGMIPLGS 500
Query: 80 CTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAA 139
CTMK N P+ +HP+ E QG ++ ELE+WL +ITG D ++QP +
Sbjct: 501 CTMKLNATTEMIPVTWPEFGGLHPFAPESQTQGYAEMLAELERWLADITGYDAVSMQPNS 560
Query: 140 GANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFKVIEIPSNENGTV- 198
GA GE+ G+++I+ YH RGE RN L+P SAHGTNPASAAM G +V+ + ++E G +
Sbjct: 561 GAQGEYAGLLVIRKYHEARGEAHRNICLIPASAHGTNPASAAMMGMQVVVVKTDEQGNID 620
Query: 199 --DLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLNGILGK 256
DL+A A S+ A LM+T P+T G++E+ + ++ ++H+ GG +Y DGAN+N ++G
Sbjct: 621 FDDLKAQAEAHSDHLAALMITYPSTHGVYEENVRDVCDLIHQHGGQVYLDGANMNAMVGV 680
Query: 257 VRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPLVSYDEENDRYYLD 316
+PG +G D+ HLNLHKTF+ PHGGGGPG GP+GVK L +LP V+ ++
Sbjct: 681 AKPGLIGGDVSHLNLHKTFAIPHGGGGPGMGPIGVKAHLAPFLPNHAVAPTSDS------ 734
Query: 317 YDVPKSIGKVKEL-FGNFAVLVRALTYLKVMGKDGLREVSEVAVLNANYLARKLKGTRGY 375
G V +G+ ++L + Y+K++G GLR+ ++VA+LNANY+A++L G
Sbjct: 735 -----HTGAVSAAPYGSASILPISYLYIKLLGAAGLRQSTQVALLNANYIAKRLSGAFPV 789
Query: 376 ELPHKELR-KHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLIVHEALMIEPT 434
K R HE + P+K+E+GV D+AKRL+D+G HAPT+ FP V LMIEPT
Sbjct: 790 LYSGKGGRVAHECILDIRPLKQESGVSEEDIAKRLMDYGFHAPTMSFP--VPGTLMIEPT 847
Query: 435 ETVSKEELDAYVEAMKKISEE 455
E+ K ELD +V+AM I E
Sbjct: 848 ESEPKAELDRFVDAMLNIRRE 868
>pir||T16734 hypothetical protein R12C12.1 - Caenorhabditis elegans
>gi|746454|gb|AAC46780.1| (U23510) similar to glycine
dehydrogenase [Caenorhabditis elegans]
Length = 979
Score = 340 bits (862), Expect = 3e-92
Identities = 195/478 (40%), Positives = 275/478 (56%), Gaps = 52/478 (10%)
Query: 52 SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQ 111
SE ++V++ RL + + + PLGSCTMK N P ++ IHP+ +
Sbjct: 507 SEQQLVRYMKRLENKDVSLVHSMIPLGSCTMKLNASAELIPITWPTLSSIHPFAPVEQAK 566
Query: 112 GALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDS 171
G RI +LE+WL EITG D F+LQP +GANGE+ G++ I+ Y + +GE QRN L+P S
Sbjct: 567 GYSRIFGDLEKWLCEITGYDNFSLQPNSGANGEYAGLLAIRNYLIHKGEEQRNICLIPTS 626
Query: 172 AHGTNPASAAMAGFKVIEIPSNENGTV---DLEALENAVSERTAGLMLTNPNTLGIFEDE 228
AHGTNPASA MA KV+ + S+ +G + DL A S + A +M+T P+T G+FE
Sbjct: 627 AHGTNPASAQMANMKVVVVDSDHHGNINYKDLAAKAEKYSNQLAAIMVTYPSTHGVFESS 686
Query: 229 IEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGP 288
I ++ VH+ GG +Y DGAN+N +G RPGD G D+ HLNLHKTF PHGGGGPG GP
Sbjct: 687 IRDVCDKVHEHGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIPHGGGGPGVGP 746
Query: 289 VGVKEFLKDYLPVPLVSYDEENDRYYLDYDVP---KSIGKVKEL-FGNFAVLVRALTYLK 344
+GVK+ L +LP V VP + +G V +G+ ++L Y++
Sbjct: 747 IGVKKHLAPFLPGHSV--------------VPVDGRKVGSVASAPYGSASILAITWAYIR 792
Query: 345 VMGKDGLREVSEVAVLNANYLARKLKGTRGYELPHKE---LRKHEVVFSAEPMKRETGVR 401
+MG GLRE S+VA+LNANY+A++L+ Y + +K+ L HE + +P K+ G+
Sbjct: 793 MMGPVGLREASQVAILNANYMAKRLE--NDYRIVYKDEQGLVAHEFIMDCKPFKKH-GIE 849
Query: 402 TLDVAKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE------ 455
+D+AKRL+D+G H+PT+ +P VH+ LMIEPTE+ K E+D VEA+ I EE
Sbjct: 850 VVDIAKRLMDYGFHSPTMSWP--VHDCLMIEPTESEDKAEMDRLVEALLSIREEIRQVEN 907
Query: 456 ----AYTNPEVVKSAPHNTAVRRVD--------DVLASKKPIITWKMYKELKEKGEVD 501
+ NP +K APH D ++ A KP W +K G VD
Sbjct: 908 GSLDKHLNP--LKMAPHTLEKVTSDNWNMPYSRELAAFPKP---WCTHKAWPTVGRVD 960
>pir||S76257 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1653603|dbj|BAA18516.1| (D90914) P protein of
glycine cleavage complex [Synechocystis sp.]
Length = 983
Score = 333 bits (846), Expect = 2e-90
Identities = 187/461 (40%), Positives = 272/461 (58%), Gaps = 36/461 (7%)
Query: 31 DVDVEIPEKLKRKSPLNLPEV------SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKY 84
+V P L R+S L L + SE E++++ +L + +++ + PLGSCTMK
Sbjct: 476 EVKTSFPADLTRQS-LYLQDAVFNQYHSETELLRYLHQLESKDLALNTSMIPLGSCTMKL 534
Query: 85 NPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAAGANGE 144
N P+ IHP+ +G + +LE WL EITG D +LQP AG+ GE
Sbjct: 535 NATAEMMPVTWPEFGKIHPFAPAGQTEGYQILFAQLEAWLGEITGFDAISLQPNAGSQGE 594
Query: 145 FTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFKVIEIPSNENGTVDLEALE 204
+ G+ +I+ YHL RGE QRN L+P+SAHGTNPASA M G +V+ + + G +D+E L
Sbjct: 595 YAGLQVIRQYHLSRGEEQRNICLIPESAHGTNPASAVMCGMQVVPVKCDGEGNIDVEDLT 654
Query: 205 NAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLNGILGKVRPGD 261
+ +R A LM+T P+T G+FE I I IVH+ GG +Y DGAN+N +G RP D
Sbjct: 655 SKAEKYGDRLAALMVTYPSTHGVFEATIGTICDIVHRFGGEVYMDGANMNAQVGLCRPAD 714
Query: 262 MGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPLVSYDEENDRYYLDYDVPK 321
G D+ HLNLHKTF PHGGGGPG GP+GVK L+ +LP ++ E +
Sbjct: 715 FGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLQAFLPRTSLNSTAELQA------EDQ 768
Query: 322 SIGKVKEL-FGNFAVLVRALTYLKVMGKDGLREVSEVAVLNANYLARKLKG-----TRGY 375
SIG + +G+ ++LV + Y+ +MG GL + +EVA+L+ANY+A++L+ RG
Sbjct: 769 SIGMISAAPYGSASILVISWMYIAMMGPQGLTKATEVAILSANYMAKRLENYYPILFRG- 827
Query: 376 ELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLIVHEALMIEPTE 435
+ EL HE + P+K++ + DVAKRL+DFG HAPT+ +P++ +M+EPTE
Sbjct: 828 ---NNELVAHECILDLRPLKKQAAIEVEDVAKRLMDFGFHAPTVSWPVL--GTMMVEPTE 882
Query: 436 TVSKEELDAYVEAMKKISEE--AYTNPEV------VKSAPH 468
+ S ELD + +AM I +E A T+ E+ +K+APH
Sbjct: 883 SESLGELDRFCDAMIAIYQEAQAITHGEIDPADNPLKNAPH 923
>sp|O49850|GCSP_FLAAN GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN) >gi|2894358|emb|CAB16911.1| (Z99762)
P-protein [Flaveria anomala]
Length = 1034
Score = 327 bits (829), Expect = 2e-88
Identities = 188/483 (38%), Positives = 273/483 (55%), Gaps = 42/483 (8%)
Query: 12 IFELSRPGRVGYTLPKPIEDVDVEIPEKLKRKSPLNLPEV-----SEPEVVKHYTRLSEM 66
+F L +P V +T +V IP L R++P + +E E++++ ++L
Sbjct: 503 VFALGKP--VPFTAASIAPEVQDAIPSGLVRETPYLTHPIFNMYHTEHELLRYISKLQSK 560
Query: 67 NYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKE 126
+ + + PLGSCTMK N P A IHP+ QG + L L
Sbjct: 561 DLSLCHSMIPLGSCTMKLNATTEMMPVTWPAFADIHPFAPTEQAQGYQEMFKNLGDLLCT 620
Query: 127 ITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFK 186
ITG D F+LQP AGA GE+ G+M+I+AYH+ RG+ RN ++P SAHGTNPASAAM G K
Sbjct: 621 ITGFDSFSLQPNAGAAGEYAGLMVIRAYHMARGDHHRNVCIIPVSAHGTNPASAAMCGMK 680
Query: 187 VIEIPSNENGTVDLEALENAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLL 243
+I + ++ G +++E L A E + LM+T P+T G++E+ I+EI KI+H GG +
Sbjct: 681 IITVGTDSKGNINIEELRKAAEANKENLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQV 740
Query: 244 YYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLP--- 300
Y DGAN+N +G PG +G D+ HLNLHKTF PHGGGGPG GP+GVK+ L YLP
Sbjct: 741 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPYLPSHP 800
Query: 301 -VPL--VSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVMGKDGLREVSE 356
VP + EE+ + +G + +G+ +L + TY+ +MG G+ S+
Sbjct: 801 VVPTGGIPAPEES----------QPLGTIAAAPWGSALILPISYTYIAMMGSQGITNASK 850
Query: 357 VAVLNANYLARKLKGTRGYELPHKELR---KHEVVFSAEPMKRETGVRTLDVAKRLLDFG 413
+A+LNANY+A++L+ Y + + + HE + P+K G+ DVAKRL+D+G
Sbjct: 851 IAILNANYMAKRLE--NHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYG 908
Query: 414 MHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEEAYT--------NPEVVKS 465
H PT+ +P V LMIEPTE+ SK ELD + +A+ I +E N V+K
Sbjct: 909 FHGPTMSWP--VPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDFNNNVIKG 966
Query: 466 APH 468
APH
Sbjct: 967 APH 969
>gb|AAD56281.1|AF137264_1 (AF137264) glycine decarboxylase p protein [Anas platyrhynchos]
Length = 1024
Score = 326 bits (828), Expect = 3e-88
Identities = 181/438 (41%), Positives = 256/438 (58%), Gaps = 38/438 (8%)
Query: 52 SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQ 111
SE +V++ RL + + + PLGSCTMK N + A IHP+ Q
Sbjct: 534 SETNIVRYMKRLENKDISLVHSMIPLGSCTMKLNSSAELAPISWKEFANIHPFVPLDQAQ 593
Query: 112 GALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDS 171
G ++ +LE+ L EITG D+ + QP +GA GE+ G+ IKAY +GE R+ L+P S
Sbjct: 594 GYQQLFKDLEKDLCEITGYDKISFQPNSGAQGEYAGLAAIKAYLNAKGERHRSVCLIPRS 653
Query: 172 AHGTNPASAAMAGFKVIEIPSNENGTVDLEALENAVS---ERTAGLMLTNPNTLGIFEDE 228
AHGTNPASA MAG K+ + ++NG++D+ L+ V E A +M+T P+T G+FE+E
Sbjct: 654 AHGTNPASAQMAGMKIQPVEVDKNGSIDISHLKAMVDKHKENLAAIMITYPSTNGVFEEE 713
Query: 229 IEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGP 288
I ++ +++HK GG +Y DGAN+N +G RPGD G D+ HLNLHKTF PHGGGGPG GP
Sbjct: 714 IGDVCELIHKNGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIPHGGGGPGMGP 773
Query: 289 VGVKEFLKDYLPV-PLVSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVM 346
+GVK+ L YLP P++ + D +G V +G+ A+L + Y+K M
Sbjct: 774 IGVKKHLAPYLPTHPVIKIQTDKDAC--------PLGTVSAAPWGSSAILPISWVYIKTM 825
Query: 347 GKDGLREVSEVAVLNANYLARKL--------KGTRGYELPHKELRKHEVVFSAEPMKRET 398
G GL+ SEVA+LNANY+A++L +G RGY HE + P K+
Sbjct: 826 GAKGLKHASEVAILNANYMAKRLEKHYKILFRGVRGYV-------AHEFILDTRPFKKTA 878
Query: 399 GVRTLDVAKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKIS----- 453
+ +D+AKRL D+G HAPT+ +P V LMIEPTE+ K ELD + +AM I
Sbjct: 879 NIEAVDLAKRLQDYGFHAPTMSWP--VAGTLMIEPTESEDKAELDRFCDAMISIRQEIAE 936
Query: 454 -EEAYTNPEV--VKSAPH 468
EE +P++ +K +PH
Sbjct: 937 IEEGRMDPQINPLKMSPH 954
>sp|O49954|GCSP_SOLTU GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN) >gi|7489225|pir||T07826
aminomethyltransferase (EC 2.1.2.10) precursor - potato
>gi|2894362|emb|CAB16918.1| (Z99770) P-Protein precursor
[Solanum tuberosum]
Length = 1035
Score = 326 bits (828), Expect = 3e-88
Identities = 185/485 (38%), Positives = 275/485 (56%), Gaps = 30/485 (6%)
Query: 12 IFELSRPGRVGYTLPKPIEDVDVEIPEKLKRKSPLNLPEV-----SEPEVVKHYTRLSEM 66
+F L +P V +T ++V+ IP L R++P ++ +E E++++ +L
Sbjct: 504 VFALGKP--VPFTAQSIAQEVENLIPSGLTRETPFLTHQIFNSYHTEHELLRYLHKLQSK 561
Query: 67 NYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKE 126
+ + + PLGSCTMK N P A IHP+ G + +L L
Sbjct: 562 DLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPTEQAAGYQEMFDDLGALLCT 621
Query: 127 ITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFK 186
ITG D F+LQP AGA GE+ G+M+I+AYH+ RG+ RN ++P SAHGTNPASAAM G K
Sbjct: 622 ITGFDSFSLQPNAGAAGEYAGLMVIRAYHMSRGDHHRNVCIIPVSAHGTNPASAAMCGMK 681
Query: 187 VIEIPSNENGTVDLEALENAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLL 243
++ + ++ G +++E L A + A LM+T P+T G++E+ I+EI KI+H GG +
Sbjct: 682 IVAVGTDAKGNINIEELRKAAEANKDNLAALMVTYPSTHGVYEEGIDEICKIIHDNGGQV 741
Query: 244 YYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPL 303
Y DGAN+N +G PG +G D+ HLNLHKTF PHGGGGPG GP+GVK+ L YLP
Sbjct: 742 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPYLP--- 798
Query: 304 VSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVMGKDGLREVSEVAVLNA 362
S+ D + +G + +G+ +L + TY+ +MG GL + S++A+L+A
Sbjct: 799 -SHPVVPTGGIPSPDKSEPLGAISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILSA 857
Query: 363 NYLARKLKGTRGYELPHKELR---KHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTI 419
NY+A++L+ + Y + + + HE + K G+ DVAKRL+D+G H PT+
Sbjct: 858 NYMAKRLE--KHYPVLFRGVNGTCAHEFIIDLRGFKNTAGIEPEDVAKRLIDYGFHGPTM 915
Query: 420 YFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE--------AYTNPEVVKSAPHNTA 471
+P V LMIEPTE+ SK ELD + +A+ I EE N V+K APH +
Sbjct: 916 SWP--VPGTLMIEPTESESKAELDRFCDALISIREEIAQIEKGNVDINNNVLKGAPHPPS 973
Query: 472 VRRVD 476
+ D
Sbjct: 974 MLMAD 978
>pir||T02615 probable glycine dehydrogenase (decarboxylating) (EC 1.4.4.2)
T19L18.11 - Arabidopsis thaliana
>gi|3413705|gb|AAC31228.1| (AC004747) putative glycine
dehydrogenase [Arabidopsis thaliana]
Length = 1044
Score = 326 bits (827), Expect = 3e-88
Identities = 186/494 (37%), Positives = 275/494 (55%), Gaps = 37/494 (7%)
Query: 8 DEPLIFELSRPGR-VGYTLPKPIEDVDVEIPEKLKRKSPLNLPEV-----SEPEVVKHYT 61
D +FE+ G+ V +T + + IP L R+SP + +E E++++
Sbjct: 506 DVDKLFEVFASGKPVQFTAESLAPEFNNAIPSSLTRESPYLTHPIFNMYHTEHELLRYIH 565
Query: 62 RLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELE 121
+L + + + PLGSCTMK N P +HP+ QG + L
Sbjct: 566 KLQNKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTNMHPFAPVEQAQGYQEMFTNLG 625
Query: 122 QWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAA 181
+ L ITG D F+LQP AGA GE+ G+M+I+AYH+ RG+ RN ++P SAHGTNPASAA
Sbjct: 626 ELLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHMSRGDHHRNVCIIPVSAHGTNPASAA 685
Query: 182 MAGFKVIEIPSNENGTVDLEALENAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHK 238
M G K++ + ++ G +++E L NA + A LM+T P+T G++E+ I+EI I+H+
Sbjct: 686 MCGMKIVAVGTDAKGNINIEELRNAAEANKDNLAALMVTYPSTHGVYEEGIDEICNIIHE 745
Query: 239 AGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDY 298
GG +Y DGAN+N +G PG +G D+ HLNLHKTF PHGGGGPG GP+GVK+ L +
Sbjct: 746 NGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKQHLAPF 805
Query: 299 LP----VPLVSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVMGKDGLRE 353
LP +P E + +G + +G+ +L + TY+ +MG GL +
Sbjct: 806 LPSHPVIPTGGIPEP--------EQTSPLGTISAAPWGSALILPISYTYIAMMGSGGLTD 857
Query: 354 VSEVAVLNANYLARKLKGTRGYELPHKELR---KHEVVFSAEPMKRETGVRTLDVAKRLL 410
S++A+LNANY+A++L+ Y + + + HE + K G+ DVAKRL+
Sbjct: 858 ASKIAILNANYMAKRLES--HYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLM 915
Query: 411 DFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE--------AYTNPEV 462
D+G H PT+ +P V LMIEPTE+ SK ELD + +A+ I EE A N V
Sbjct: 916 DYGFHGPTMSWP--VPGTLMIEPTESESKAELDRFCDALISIREEISQIEKGNADPNNNV 973
Query: 463 VKSAPHNTAVRRVD 476
+K APH ++ D
Sbjct: 974 LKGAPHPPSLLMAD 987
>pir||A39521 glycine dehydrogenase (decarboxylating) (EC 1.4.4.2) precursor -
chicken
Length = 1003
Score = 326 bits (826), Expect = 5e-88
Identities = 182/438 (41%), Positives = 255/438 (57%), Gaps = 38/438 (8%)
Query: 52 SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQ 111
SE +V++ RL + + + PLGSCTMK N + A IHP+ Q
Sbjct: 513 SETNIVRYMKRLENKDISLVHSMIPLGSCTMKLNSSAELAPISWKEFANIHPFVPLDQAQ 572
Query: 112 GALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDS 171
G ++ +LE+ L EITG D+ + QP +GA GE+ G+ IKAY +GE R+ L+P S
Sbjct: 573 GYQQLFKDLEKDLCEITGYDKISFQPNSGAQGEYAGLAAIKAYLNAKGERHRSVCLIPRS 632
Query: 172 AHGTNPASAAMAGFKVIEIPSNENGTVDLEALENAVS---ERTAGLMLTNPNTLGIFEDE 228
AHGTNPASA MAG K+ I ++NG++D+ L+ V E A +M+T P+T G+FE+E
Sbjct: 633 AHGTNPASAQMAGMKIQPIEVDKNGSIDISHLKAMVDKHKENLAAIMITYPSTNGVFEEE 692
Query: 229 IEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGP 288
I ++ ++HK GG +Y DGAN+N +G RPGD G D+ HLNLHKTF PHGGGGPG GP
Sbjct: 693 IGDVCDLIHKHGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIPHGGGGPGMGP 752
Query: 289 VGVKEFLKDYLPV-PLVSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVM 346
+GVK+ L YLP P++ + D +G V +G+ A+L + Y+K M
Sbjct: 753 IGVKKHLAPYLPTHPVIKIQTDKDAC--------PLGTVSAAPWGSSAILPISWVYIKTM 804
Query: 347 GKDGLREVSEVAVLNANYLARKL--------KGTRGYELPHKELRKHEVVFSAEPMKRET 398
G GL+ SE+A+LNANY+A++L +G RGY HE + P K+
Sbjct: 805 GAKGLKHASEIAILNANYMAKRLEKHYKILFRGVRGYV-------AHEFILDTRPFKKTA 857
Query: 399 GVRTLDVAKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKIS----- 453
+ +D+AKRL D+G HAPT+ +P V LMIEPTE+ K ELD + +AM I
Sbjct: 858 NIEAVDLAKRLQDYGFHAPTMSWP--VAGTLMIEPTESEDKGELDRFCDAMISIRQEIAD 915
Query: 454 -EEAYTNPEV--VKSAPH 468
EE +P+V +K +PH
Sbjct: 916 IEEGRMDPQVNPLKMSPH 933
>sp|P15505|GCSP_CHICK GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN) >gi|212585|gb|AAA49029.1| (M64402) glycine
decarboxylase [Gallus gallus] >gi|222821|dbj|BAA14313.1|
(D90266) glycine decarboxylase precursor [Gallus gallus]
Length = 1004
Score = 326 bits (826), Expect = 5e-88
Identities = 182/438 (41%), Positives = 255/438 (57%), Gaps = 38/438 (8%)
Query: 52 SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQ 111
SE +V++ RL + + + PLGSCTMK N + A IHP+ Q
Sbjct: 514 SETNIVRYMKRLENKDISLVHSMIPLGSCTMKLNSSAELAPISWKEFANIHPFVPLDQAQ 573
Query: 112 GALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDS 171
G ++ +LE+ L EITG D+ + QP +GA GE+ G+ IKAY +GE R+ L+P S
Sbjct: 574 GYQQLFKDLEKDLCEITGYDKISFQPNSGAQGEYAGLAAIKAYLNAKGERHRSVCLIPRS 633
Query: 172 AHGTNPASAAMAGFKVIEIPSNENGTVDLEALENAVS---ERTAGLMLTNPNTLGIFEDE 228
AHGTNPASA MAG K+ I ++NG++D+ L+ V E A +M+T P+T G+FE+E
Sbjct: 634 AHGTNPASAQMAGMKIQPIEVDKNGSIDISHLKAMVDKHKENLAAIMITYPSTNGVFEEE 693
Query: 229 IEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGP 288
I ++ ++HK GG +Y DGAN+N +G RPGD G D+ HLNLHKTF PHGGGGPG GP
Sbjct: 694 IGDVCDLIHKHGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIPHGGGGPGMGP 753
Query: 289 VGVKEFLKDYLPV-PLVSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVM 346
+GVK+ L YLP P++ + D +G V +G+ A+L + Y+K M
Sbjct: 754 IGVKKHLAPYLPTHPVIKIQTDKDAC--------PLGTVSAAPWGSSAILPISWVYIKTM 805
Query: 347 GKDGLREVSEVAVLNANYLARKL--------KGTRGYELPHKELRKHEVVFSAEPMKRET 398
G GL+ SE+A+LNANY+A++L +G RGY HE + P K+
Sbjct: 806 GAKGLKHASEIAILNANYMAKRLEKHYKILFRGVRGYV-------AHEFILDTRPFKKTA 858
Query: 399 GVRTLDVAKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKIS----- 453
+ +D+AKRL D+G HAPT+ +P V LMIEPTE+ K ELD + +AM I
Sbjct: 859 NIEAVDLAKRLQDYGFHAPTMSWP--VAGTLMIEPTESEDKGELDRFCDAMISIRQEIAD 916
Query: 454 -EEAYTNPEV--VKSAPH 468
EE +P+V +K +PH
Sbjct: 917 IEEGRMDPQVNPLKMSPH 934
>pir||S40216 P protein - Flaveria pringlei >gi|438003|emb|CAA81076.1| (Z25857) P
protein [Flaveria pringlei]
Length = 1037
Score = 326 bits (826), Expect = 5e-88
Identities = 185/477 (38%), Positives = 270/477 (55%), Gaps = 30/477 (6%)
Query: 12 IFELSRPGRVGYTLPKPIEDVDVEIPEKLKRKSPLNLPEV-----SEPEVVKHYTRLSEM 66
+F L +P V +T +V IP L R++P + +E E++++ ++L
Sbjct: 506 VFALGKP--VTFTAASIAPEVQDAIPSGLVRETPYLTHPIFNMYHTEHELLRYISKLQSK 563
Query: 67 NYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKE 126
+ + + PLGSCTMK N P A IHP+ QG + L L
Sbjct: 564 DLSLCHSMIPLGSCTMKLNATTEMMPVTWPAFADIHPFAPTEQAQGYQEMFKNLGDLLCT 623
Query: 127 ITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFK 186
ITG D F+LQP AGA GE+ G+M+I+AYH+ RG+ RN ++P SAHGTNPASAAM G K
Sbjct: 624 ITGFDSFSLQPNAGAAGEYAGLMVIRAYHMARGDHHRNVCIIPVSAHGTNPASAAMCGMK 683
Query: 187 VIEIPSNENGTVDLEALENAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLL 243
+I + ++ G +++E L A E + LM+T P+T G++E+ I+EI KI+H GG +
Sbjct: 684 IITVGTDSKGNINIEELRKAAEANKENLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQV 743
Query: 244 YYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPL 303
Y DGAN+N +G PG +G D+ HLNLHKTF PHGGGGPG GP+GVK+ L YLP
Sbjct: 744 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPYLP--- 800
Query: 304 VSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVMGKDGLREVSEVAVLNA 362
S+ + + +G + +G+ +L + TY+ +MG G+ S++A+LNA
Sbjct: 801 -SHPVVATGGIPAPEQSQPLGTIAAAPWGSALILPISYTYIAMMGSQGITNASKIAILNA 859
Query: 363 NYLARKLKGTRGYELPHKELR---KHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTI 419
NY+A++L+ Y + + + HE + P+K G+ DVAKRL+D+G H PT+
Sbjct: 860 NYMAKRLE--NHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTM 917
Query: 420 YFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE--------AYTNPEVVKSAPH 468
+P V LMIEPTE+ SK ELD + +A+ I +E N V+K APH
Sbjct: 918 SWP--VPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDLNNNVIKGAPH 972
>sp|P49361|GCSA_FLAPR GLYCINE DEHYDROGENASE [DECARBOXYLATING] A, MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE A) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN A) >gi|2130011|pir||S63535
aminomethyltransferase (EC 2.1.2.10) gdcsPA precursor -
Flaveria pringlei >gi|608712|emb|CAA85353.1| (Z36879)
P-protein of the glycine cleavage system [Flaveria
pringlei]
Length = 1037
Score = 326 bits (826), Expect = 5e-88
Identities = 185/477 (38%), Positives = 270/477 (55%), Gaps = 30/477 (6%)
Query: 12 IFELSRPGRVGYTLPKPIEDVDVEIPEKLKRKSPLNLPEV-----SEPEVVKHYTRLSEM 66
+F L +P V +T +V IP L R++P + +E E++++ ++L
Sbjct: 506 VFALGKP--VTFTAASIAPEVQDAIPSGLVRETPYLTHPIFNMYHTEHELLRYISKLQSK 563
Query: 67 NYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKE 126
+ + + PLGSCTMK N P A IHP+ QG + L L
Sbjct: 564 DLSLCHSMIPLGSCTMKLNATTEMMPVTWPAFADIHPFAPTEQAQGYQEMFKNLGDLLCT 623
Query: 127 ITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFK 186
ITG D F+LQP AGA GE+ G+M+I+AYH+ RG+ RN ++P SAHGTNPASAAM G K
Sbjct: 624 ITGFDSFSLQPNAGAAGEYAGLMVIRAYHMARGDHHRNVCIIPVSAHGTNPASAAMCGMK 683
Query: 187 VIEIPSNENGTVDLEALENAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLL 243
+I + ++ G +++E L A E + LM+T P+T G++E+ I+EI KI+H GG +
Sbjct: 684 IITVGTDSKGNINIEELRKAAEANKENLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQV 743
Query: 244 YYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPL 303
Y DGAN+N +G PG +G D+ HLNLHKTF PHGGGGPG GP+GVK+ L YLP
Sbjct: 744 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPYLP--- 800
Query: 304 VSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVMGKDGLREVSEVAVLNA 362
S+ + + +G + +G+ +L + TY+ +MG G+ S++A+LNA
Sbjct: 801 -SHPVVATGGIPAPEQSQPLGTIAAAPWGSALILPISYTYIAMMGSQGITNASKIAILNA 859
Query: 363 NYLARKLKGTRGYELPHKELR---KHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTI 419
NY+A++L+ Y + + + HE + P+K G+ DVAKRL+D+G H PT+
Sbjct: 860 NYMAKRLE--NHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTM 917
Query: 420 YFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE--------AYTNPEVVKSAPH 468
+P V LMIEPTE+ SK ELD + +A+ I +E N V+K APH
Sbjct: 918 SWP--VPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDLNNNVIKGAPH 972
>sp|P49362|GCSB_FLAPR GLYCINE DEHYDROGENASE [DECARBOXYLATING] B, MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE B) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN B) >gi|2130012|pir||S63536
aminomethyltransferase (EC 2.1.2.10) gdcsPB precursor -
Flaveria pringlei >gi|1000489|emb|CAA91000.1| (Z54239)
P-protein precursor of glycine cleavage system [Flaveria
pringlei]
Length = 1034
Score = 326 bits (826), Expect = 5e-88
Identities = 185/477 (38%), Positives = 270/477 (55%), Gaps = 30/477 (6%)
Query: 12 IFELSRPGRVGYTLPKPIEDVDVEIPEKLKRKSPLNLPEV-----SEPEVVKHYTRLSEM 66
+F L +P V +T +V IP L R++P + +E E++++ ++L
Sbjct: 503 VFALGKP--VTFTAASIAPEVQDAIPSGLVRETPYLTHPIFNMYHTEHELLRYISKLQSK 560
Query: 67 NYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKE 126
+ + + PLGSCTMK N P A IHP+ QG + L L
Sbjct: 561 DLSLCHSMIPLGSCTMKLNATTEMMPVTWPAFADIHPFAPTEQAQGYQEMFKNLGDLLCT 620
Query: 127 ITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFK 186
ITG D F+LQP AGA GE+ G+M+I+AYH+ RG+ RN ++P SAHGTNPASAAM G K
Sbjct: 621 ITGFDSFSLQPNAGAAGEYAGLMVIRAYHMARGDHHRNVCIIPVSAHGTNPASAAMCGMK 680
Query: 187 VIEIPSNENGTVDLEALENAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLL 243
+I + ++ G +++E L A E + LM+T P+T G++E+ I+EI KI+H GG +
Sbjct: 681 IITVGTDSKGNINIEELRKAAEANKENLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQV 740
Query: 244 YYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPL 303
Y DGAN+N +G PG +G D+ HLNLHKTF PHGGGGPG GP+GVK+ L YLP
Sbjct: 741 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPYLP--- 797
Query: 304 VSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVMGKDGLREVSEVAVLNA 362
S+ + + +G + +G+ +L + TY+ +MG G+ S++A+LNA
Sbjct: 798 -SHPVVPTGGIPAPEQSQPLGTIAAAPWGSALILPISYTYIAMMGSQGITNASKIAILNA 856
Query: 363 NYLARKLKGTRGYELPHKELR---KHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTI 419
NY+A++L+ Y + + + HE + P+K G+ DVAKRL+D+G H PT+
Sbjct: 857 NYMAKRLE--NHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTM 914
Query: 420 YFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEEAYT--------NPEVVKSAPH 468
+P V LMIEPTE+ SK ELD + +A+ I +E N V+K APH
Sbjct: 915 SWP--VPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDFNNNVIKGAPH 969
>pir||D83339 glycine cleavage system protein P2 PA2445 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9948493|gb|AAG05833.1|AE004672_1 (AE004672) glycine
cleavage system protein P2 [Pseudomonas aeruginosa]
Length = 959
Score = 324 bits (823), Expect = 1e-87
Identities = 193/501 (38%), Positives = 275/501 (54%), Gaps = 68/501 (13%)
Query: 19 GRVGYTLPKPIEDVDVE--------------------------IPEKLKRKS-----PLN 47
GR+G +L + + DVE +P +L R+S P+
Sbjct: 423 GRLGLSLDETVRQTDVETLWGLLAEEGQALPDFAALAASSGDRLPVELLRQSAILSHPIF 482
Query: 48 LPEVSEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDE 107
SE E++++ +L++ + +D + PLGSCTMK N + +HP+
Sbjct: 483 NRHHSETELMRYLRKLADKDLALDRTMIPLGSCTMKLNAASEMIPVTWAEFGNLHPFAPA 542
Query: 108 RTVQGALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEML 167
+G ++ ELE L TG D +LQP AG+ GE+ G++ I+AYH RG++QR+ L
Sbjct: 543 EQSEGYRQLTDELEAMLCSATGYDAVSLQPNAGSQGEYAGLLAIRAYHQSRGDSQRDICL 602
Query: 168 VPDSAHGTNPASAAMAGFKVIEIPSNENGTVDLEALENAVSE---RTAGLMLTNPNTLGI 224
+P SAHGTNPA+A+M G +V+ + + G VD+E L N SE R A LM+T P+T G+
Sbjct: 603 IPSSAHGTNPATASMVGMRVVVVACDARGNVDVEDLRNKASEHKERLAALMITYPSTHGV 662
Query: 225 FEDEIEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGP 284
FE+ I EI IVH GG +Y DGAN+N ++G PG G D+ HLNLHKTF PHGGGGP
Sbjct: 663 FEEAIREICAIVHDCGGQVYIDGANMNAMVGLCAPGKFGGDVSHLNLHKTFCIPHGGGGP 722
Query: 285 GAGPVGVKEFLKDYLPVPLVSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYL 343
G GP+GV+ L +LP +E G V +G+ ++L Y+
Sbjct: 723 GVGPIGVRAHLAPFLPGHARGERKE--------------GAVSAAPYGSASILPITWMYI 768
Query: 344 KVMGKDGLREVSEVAVLNANYLARKLKGTRGYELPH---KELRKHEVVFSAEPMKRETGV 400
++MG +GL+ SE+A+LNANY+A +L+ Y + + L HE + P+K +G+
Sbjct: 769 RMMGGEGLKRASEMAILNANYIAHRLE--EHYPVLYAGGNGLVAHECILDLRPLKDSSGI 826
Query: 401 RTLDVAKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEEAYT-- 458
DVAKRL+DFG HAPT+ FP V LMIEPTE+ SK ELD + +AM +I EE
Sbjct: 827 SVDDVAKRLMDFGFHAPTMSFP--VAGTLMIEPTESESKAELDRFCDAMIRIREEIRAVE 884
Query: 459 --------NPEVVKSAPHNTA 471
NP +K+APH A
Sbjct: 885 RGELDKEDNP--LKNAPHTAA 903
>gb|AAF54512.1| (AE003686) CG3999 gene product [Drosophila melanogaster]
Length = 985
Score = 324 bits (821), Expect = 2e-87
Identities = 177/411 (43%), Positives = 244/411 (59%), Gaps = 18/411 (4%)
Query: 52 SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQ 111
SE +V++ +L + + + PLGSCTMK N IHP+ Q
Sbjct: 506 SESRMVRYMKKLENKDISLVHSMIPLGSCTMKLNSTTEMMPCSFRHFTDIHPFAPVEQAQ 565
Query: 112 GALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDS 171
G ++ ELE L EITG DR + QP +GA GE+ G+ I++YH R E RN L+P S
Sbjct: 566 GFHQMFKELEHDLCEITGYDRISFQPNSGAQGEYAGLRAIRSYHEHRNEGHRNICLIPIS 625
Query: 172 AHGTNPASAAMAGFKVIEIPSNENGTVDLEALENAVSERT---AGLMLTNPNTLGIFEDE 228
AHGTNPASA MAG KV I NG++D+ L E + LM+T P+T+G+FE+
Sbjct: 626 AHGTNPASAQMAGMKVEPIRILSNGSIDMAHLRAKAEEHAHELSCLMITYPSTMGVFEET 685
Query: 229 IEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGP 288
+ +I ++HK GG +Y DGAN+N +G RPGD G D+ HLNLHKTF PHGGGGPG GP
Sbjct: 686 VADICTLIHKHGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIPHGGGGPGMGP 745
Query: 289 VGVKEFLKDYLP-VPLVSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVM 346
+GVK L YLP P+VS + S G V FG+ A+L + +Y+K+M
Sbjct: 746 IGVKAHLAPYLPGHPVVSPLSSEEH---------SFGVVSAAPFGSSAILPISWSYIKLM 796
Query: 347 GKDGLREVSEVAVLNANYLARKLKG--TRGYELPHKELRKHEVVFSAEPMKRETGVRTLD 404
G GL+ ++VA+LNANY++++L+ Y+ P+ +L HE + +K+ + +D
Sbjct: 797 GSRGLKRATQVAILNANYMSKRLEQHYKTLYKAPNSQLVAHEFILDIRDLKKSANIEAVD 856
Query: 405 VAKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE 455
VAKRL+D+G HAPT+ +P V LMIEPTE+ KEELD + +AM I EE
Sbjct: 857 VAKRLMDYGFHAPTMSWP--VAGTLMIEPTESEDKEELDRFCDAMISIREE 905
>sp|O49852|GCSP_FLATR GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN) >gi|2894360|emb|CAB16916.1| (Z99767)
P-Protein precursor [Flaveria trinervia]
Length = 1034
Score = 323 bits (819), Expect = 3e-87
Identities = 184/477 (38%), Positives = 269/477 (55%), Gaps = 30/477 (6%)
Query: 12 IFELSRPGRVGYTLPKPIEDVDVEIPEKLKRKSPLNLPEV-----SEPEVVKHYTRLSEM 66
+F L +P V +T +V IP L R++P + +E E++++ ++L
Sbjct: 503 VFALGKP--VTFTAASIAPEVQDAIPSGLVRETPYLTHPIFNMYHTEHELLRYISKLQSK 560
Query: 67 NYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKE 126
+ + + PLGSCTMK N P A IHP+ QG + L L
Sbjct: 561 DLSLCHSMIPLGSCTMKLNATTEMMPVTWPAFADIHPFAPTEQAQGYQEMFKNLGDLLCT 620
Query: 127 ITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFK 186
ITG D F+LQP AGA GE+ G+M+I+AYH+ RG+ R ++P SAHGTNPASAAM G K
Sbjct: 621 ITGFDSFSLQPNAGAAGEYAGLMVIQAYHMARGDHHRKVCIIPVSAHGTNPASAAMCGMK 680
Query: 187 VIEIPSNENGTVDLEALENAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLL 243
+I + ++ G +++E L A E + LM+T P+T G++E+ I+EI KI+H GG +
Sbjct: 681 IITVGTDSKGNINIEELRKAAEANKENLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQV 740
Query: 244 YYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPL 303
Y DGAN+N +G PG +G D+ HLNLHKTF PHGGGGPG GP+GVK+ L YLP
Sbjct: 741 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPYLP--- 797
Query: 304 VSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVMGKDGLREVSEVAVLNA 362
S+ + + +G + +G+ +L + TY+ +MG G+ S++A+LNA
Sbjct: 798 -SHPVVPTGGIPAPEQSQPLGTIAAAPWGSALILPISYTYIAMMGSQGITNASKIAILNA 856
Query: 363 NYLARKLKGTRGYELPHKELR---KHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTI 419
NY+A++L+ Y + + + HE + P+K G+ DVAKRL+D+G H PT+
Sbjct: 857 NYMAKRLE--NHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTM 914
Query: 420 YFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEEAYT--------NPEVVKSAPH 468
+P V LMIEPTE+ SK ELD + +A+ I +E N V+K APH
Sbjct: 915 SWP--VPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGTVDFNNNVIKGAPH 969
>pir||E82994 glycine cleavage system protein P1 PA5213 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9951520|gb|AAG08598.1|AE004934_5 (AE004934) glycine
cleavage system protein P1 [Pseudomonas aeruginosa]
Length = 958
Score = 323 bits (818), Expect = 4e-87
Identities = 188/460 (40%), Positives = 265/460 (56%), Gaps = 42/460 (9%)
Query: 36 IPEKLKRKS-----PLNLPEVSEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINE 90
IP L+R S P+ SE E++++ +L + ++ + PLGSCTMK N
Sbjct: 462 IPAVLQRTSAYLQHPVFNAHHSETEMLRYLRQLEGKDLALNQAMIPLGSCTMKLNASSEM 521
Query: 91 ELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMI 150
P+ A +HP+ +G R++ ELE WL+ ITG D +QP +GA GE+ G++
Sbjct: 522 IPITWPEFAELHPFVPREQAEGYRRMIDELEAWLRAITGFDAICMQPNSGAQGEYAGLLA 581
Query: 151 IKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFKVIEIPSNENGTVDLEALENAVSE- 209
I+ YH RG++QR+ L+P SAHGTNPASA MA +V+ + + G VDL+ L +E
Sbjct: 582 IRRYHQSRGDSQRDICLIPASAHGTNPASAIMASMRVVIVECDPRGNVDLDDLRLKAAEA 641
Query: 210 --RTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIV 267
R + LM+T P+T G++E+ I EI ++VH+ GG +Y DGANLN +G RP D+G D+
Sbjct: 642 GDRLSCLMITYPSTHGVYEEGIGEICEVVHRHGGQVYMDGANLNAQVGLARPADIGADVS 701
Query: 268 HLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLP-VPLVSYDEENDRYYLDYDVPKSIGKV 326
H+NLHKTF PHGGGGPG GP+GVK L ++ P++ + N P +
Sbjct: 702 HMNLHKTFCIPHGGGGPGMGPIGVKRHLAPFVANHPVIRVEGPN---------PLNDAVS 752
Query: 327 KELFGNFAVLVRALTYLKVMGKDGLREVSEVAVLNANYLARKLKGT-----RGYELPHKE 381
+G+ ++L + Y+ +MG L + SEVA+L+ANYLA +L G RG E
Sbjct: 753 ATPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANRLDGAFPVLYRG----RNE 807
Query: 382 LRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEE 441
HE + P+K +TG+ DVAKRL+D+G HAPT+ FP V LM+EPTE+ SK E
Sbjct: 808 RVAHECILDLRPLKAQTGITEEDVAKRLMDYGFHAPTMSFP--VPGTLMVEPTESESKAE 865
Query: 442 LDAYVEAMKKISEE----------AYTNPEVVKSAPHNTA 471
LD +VEAM I E A NP +K APH A
Sbjct: 866 LDRFVEAMLSIRAEIGKVESGAWPAEDNP--LKRAPHTLA 903
>pir||T46636 glycine dehydrogenase (decarboxylating) (EC 1.4.4.2) [imported] -
Hordeum sp. x Triticum sp >gi|2565305|gb|AAB82711.1|
(AF024589) glycine decarboxylase P subunit [Hordeum x
Triticum]
Length = 1031
Score = 322 bits (816), Expect = 7e-87
Identities = 186/486 (38%), Positives = 276/486 (56%), Gaps = 37/486 (7%)
Query: 8 DEPLIFELSRPGR-VGYTLPKPIEDVDVEIPEKLKRKSP-LNLPEVS----EPEVVKHYT 61
D +F++ G+ V +T +V IP L R SP L P S E E++++
Sbjct: 492 DVDKLFKVFSGGKPVDFTAESIAPEVSSSIPPSLVRDSPYLTHPIFSMYHTEHELLRYLH 551
Query: 62 RLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELE 121
+L + + + PLGSCTMK N + PK A +HP+ G + L
Sbjct: 552 KLQSKDLSLCHSMIPLGSCTMKLNATVEMMPVTDPKFANMHPFAPIDQAAGYHEMFDNLG 611
Query: 122 QWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAA 181
L ITG D F+LQP AGA+GE+ G+M+I+AYH RG+ RN ++P SAHGTNPASAA
Sbjct: 612 DLLNTITGFDSFSLQPNAGASGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPASAA 671
Query: 182 MAGFKVIEIPSNENGTVDLEALENAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHK 238
M G K++ + ++ G +++E L A + + LM+T P+T G++E+ I+EI +I+H+
Sbjct: 672 MCGMKIVAVGTDAKGNINIEELRKAAEANKDNLSALMVTYPSTHGVYEEGIDEICRIIHE 731
Query: 239 AGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDY 298
GG +Y DGAN+N +G PG +G D+ HLNLHKTF PHGGGGPG GP+GVK+ L +
Sbjct: 732 NGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF 791
Query: 299 LPV-PLVSYDEENDRYYLDYDVPKSIGKVKEL----FGNFAVLVRALTYLKVMGKDGLRE 353
LP P++ + +P+ + + +G+ +L + TY+ +MG GL E
Sbjct: 792 LPSHPVIPTG--------GFPLPEKTDPLGSISAAPWGSALILPISYTYIAMMGSQGLTE 843
Query: 354 VSEVAVLNANYLARKLKGTRGYELPHKELR---KHEVVFSAEPMKRETGVRTLDVAKRLL 410
S++A+LNANY+A++L+ + Y + + + HE + K G+ DVAKRL+
Sbjct: 844 ASKIAILNANYMAKRLE--KHYPVLFRGVNGTVAHEFIIDLRGFKATAGIEPEDVAKRLM 901
Query: 411 DFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE--------AYTNPEV 462
D+G H PT+ +P V LMIEPTE+ SK ELD + +A+ I EE A + V
Sbjct: 902 DYGFHGPTMSWP--VPGTLMIEPTESESKAELDRFCDALISIREEIAEVENGKADAHNNV 959
Query: 463 VKSAPH 468
+K APH
Sbjct: 960 LKGAPH 965
>gb|AAA63798.1| (U11693) victorin binding protein [Avena sativa]
Length = 1032
Score = 321 bits (815), Expect = 9e-87
Identities = 186/486 (38%), Positives = 276/486 (56%), Gaps = 37/486 (7%)
Query: 8 DEPLIFELSRPGR-VGYTLPKPIEDVDVEIPEKLKRKSP-LNLPEVS----EPEVVKHYT 61
D +F++ G+ V +T +V IP L R SP L P S E E++++
Sbjct: 493 DVDKLFKVFSGGKPVDFTAESIAPEVSSSIPSSLVRDSPYLTHPIFSMYHTEHELLRYLH 552
Query: 62 RLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELE 121
+L + + + PLGSCTMK N + PK A +HP+ G + L
Sbjct: 553 KLQTKDLSLCHSMIPLGSCTMKLNATVEMMPVTDPKFANMHPFAPIDQAAGYHEMFDNLG 612
Query: 122 QWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAA 181
+ L ITG D F+LQP AGA+GE+ G+M+I+AYH RG+ RN ++P SAHGTNPASAA
Sbjct: 613 ELLNTITGFDSFSLQPNAGASGEYAGLMVIRAYHRARGDHHRNVCIIPVSAHGTNPASAA 672
Query: 182 MAGFKVIEIPSNENGTVDLEALENAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHK 238
M G K+I + ++ G +++ L+ A + + LM+T P+T G++E+ I+EI +I+H
Sbjct: 673 MCGMKIITVGTDSKGNINIPELKKAAEANKDNLSALMVTYPSTHGVYEEGIDEICRIIHD 732
Query: 239 AGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDY 298
GG +Y DGAN+N +G PG +G D+ HLNLHKTF PHGGGGPG GP+GVK+ L +
Sbjct: 733 NGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF 792
Query: 299 LPV-PLVSYDEENDRYYLDYDVPKSIGKVKEL----FGNFAVLVRALTYLKVMGKDGLRE 353
LP P++ + +P+ + + +G+ +L + TY+ +MG GL +
Sbjct: 793 LPSHPVIPTG--------GFPLPEKTDPLGSISAAPWGSALILPISYTYIAMMGSQGLTD 844
Query: 354 VSEVAVLNANYLARKLKGTRGYELPHKELR---KHEVVFSAEPMKRETGVRTLDVAKRLL 410
S++A+LNANY+A++L+ + Y + + + HE + K G+ DVAKRL+
Sbjct: 845 ASKIAILNANYMAKRLE--KHYPVLFRGVNGTVAHEFIIDLRGFKATAGIEPEDVAKRLM 902
Query: 411 DFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE--------AYTNPEV 462
D+G H PT+ +P V LMIEPTE+ SK ELD + +A+ I EE A N V
Sbjct: 903 DYGFHGPTMSWP--VPGTLMIEPTESESKAELDRFCDALISIREEIAQVENGIADVNNNV 960
Query: 463 VKSAPH 468
+K APH
Sbjct: 961 LKGAPH 966
>pir||T05309 probable glycine dehydrogenase (decarboxylating) (EC 1.4.4.2)
F26P21.130 - Arabidopsis thaliana
>gi|3688182|emb|CAA21210.1| (AL031804) P-Protein-like
protein [Arabidopsis thaliana]
>gi|7270248|emb|CAB80018.1| (AL161582) P-Protein-like
protein [Arabidopsis thaliana]
Length = 1037
Score = 319 bits (810), Expect = 3e-86
Identities = 184/494 (37%), Positives = 272/494 (54%), Gaps = 37/494 (7%)
Query: 8 DEPLIFELSRPGR-VGYTLPKPIEDVDVEIPEKLKRKSPLNLPEV-----SEPEVVKHYT 61
D +F++ G+ V +T +V IP L R+SP + +E E++++
Sbjct: 500 DVDKLFKVFASGKPVPFTAESLAPEVQNSIPSSLTRESPYLTHPIFNMYHTEHELLRYIH 559
Query: 62 RLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELE 121
+L + + + PLGSCTMK N P IHP+ QG + L
Sbjct: 560 KLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPVEQAQGYQEMFENLG 619
Query: 122 QWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAA 181
L ITG D F+LQP AGA GE+ G+M+I+AYH+ RG+ RN ++P SAHGTNPASAA
Sbjct: 620 DLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHMSRGDHHRNVCIIPVSAHGTNPASAA 679
Query: 182 MAGFKVIEIPSNENGTVDLEALENAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHK 238
M G K+I + ++ G +++E + A + A LM+T P+T G++E+ I+EI I+H+
Sbjct: 680 MCGMKIITVGTDAKGNINIEEVRKAAEANKDNLAALMVTYPSTHGVYEEGIDEICNIIHE 739
Query: 239 AGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDY 298
GG +Y DGAN+N +G PG +G D+ HLNLHKTF PHGGGGPG GP+GVK L +
Sbjct: 740 NGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKNHLAPF 799
Query: 299 LP----VPLVSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVMGKDGLRE 353
LP +P + + +G + +G+ +L + TY+ +MG GL +
Sbjct: 800 LPSHPVIPTGGIPQP--------EKTAPLGAISAAPWGSALILPISYTYIAMMGSGGLTD 851
Query: 354 VSEVAVLNANYLARKLKGTRGYELPHKELR---KHEVVFSAEPMKRETGVRTLDVAKRLL 410
S++A+LNANY+A++L+ + Y + + + HE + K G+ DVAKRL+
Sbjct: 852 ASKIAILNANYMAKRLE--KHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLM 909
Query: 411 DFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE--------AYTNPEV 462
D+G H PT+ +P V LMIEPTE+ SK ELD + +A+ I EE A V
Sbjct: 910 DYGFHGPTMSWP--VPGTLMIEPTESESKAELDRFCDALISIREEIAQIEKGNADVQNNV 967
Query: 463 VKSAPHNTAVRRVD 476
+K APH ++ D
Sbjct: 968 LKGAPHPPSLLMAD 981
>sp|P26969|GCSP_PEA GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN) >gi|282926|pir||A42109 glycine dehydrogenase
(decarboxylating) (EC 1.4.4.2) component P precursor -
garden pea >gi|20741|emb|CAA42443.1| (X59773) component
of aminomethyltransferase [Pisum sativum]
Length = 1057
Score = 319 bits (809), Expect = 4e-86
Identities = 184/494 (37%), Positives = 273/494 (55%), Gaps = 37/494 (7%)
Query: 8 DEPLIFELSRPGR-VGYTLPKPIEDVDVEIPEKLKRKSPLNLPEV-----SEPEVVKHYT 61
D +F++ G+ V +T + IP L R+SP + +E E++++
Sbjct: 518 DVDKLFKVFAGGKPVSFTAASLAPEFQNAIPSGLVRESPYLTHPIFNTYQTEHELLRYIH 577
Query: 62 RLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELE 121
RL + + + PLGSCTMK N P +HP+ QG + L
Sbjct: 578 RLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDLHPFAPTEQAQGYQEMFNNLG 637
Query: 122 QWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAA 181
L ITG D F+LQP AGA GE+ G+M+I+AYHL RG+ RN ++P SAHGTNPASAA
Sbjct: 638 DLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPASAHGTNPASAA 697
Query: 182 MAGFKVIEIPSNENGTVDLEALENAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHK 238
M G K++ I ++ G +++E L+ A + + M+T P+T G++E+ I++I KI+H
Sbjct: 698 MVGMKIVTIGTDAKGNINIEELKKAAEKHKDNLSAFMVTYPSTHGVYEEGIDDICKIIHD 757
Query: 239 AGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDY 298
GG +Y DGAN+N +G PG +G D+ HLNLHKTF PHGGGGPG GP+GVK+ L +
Sbjct: 758 NGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF 817
Query: 299 LP----VPLVSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVMGKDGLRE 353
LP VP + P+ +G + +G+ +L + TY+ +MG GL +
Sbjct: 818 LPSHPVVPTGGIPAPEN--------PQPLGSISAAPWGSALILPISYTYIAMMGSQGLTD 869
Query: 354 VSEVAVLNANYLARKLKGTRGYELPHKELR---KHEVVFSAEPMKRETGVRTLDVAKRLL 410
S++A+LNANY+A++L+ Y + + + HE + K G+ DVAKRL+
Sbjct: 870 ASKIAILNANYMAKRLESY--YPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLM 927
Query: 411 DFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE--------AYTNPEV 462
D+G H PT+ +P V LMIEPTE+ SK ELD + +A+ I +E A + V
Sbjct: 928 DYGFHGPTMSWP--VAGTLMIEPTESESKAELDRFCDALISIRKEIAEVEKGNADVHNNV 985
Query: 463 VKSAPHNTAVRRVD 476
+K APH ++ D
Sbjct: 986 LKGAPHPPSLLMAD 999
>pir||C82687 glycine decarboxylase XF1385 [imported] - Xylella fastidiosa
(strain 9a5c) >gi|9106393|gb|AAF84194.1|AE003970_1
(AE003970) glycine decarboxylase [Xylella fastidiosa]
Length = 993
Score = 318 bits (807), Expect = 8e-86
Identities = 184/442 (41%), Positives = 262/442 (58%), Gaps = 31/442 (7%)
Query: 52 SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQ 111
SE E++++ L++ + +D + PLGSCTMK N + A IHP
Sbjct: 491 SEHELLRYLRMLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWQEFACIHPLAPAVQWS 550
Query: 112 GALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDS 171
G +++ ELE L E TG D +LQP +GA GE+ G++ I+AYH RGE +RN L+P+S
Sbjct: 551 GYRQLIDELEAMLAECTGYDAISLQPNSGAQGEYAGLLAIRAYHRSRGEERRNVCLIPES 610
Query: 172 AHGTNPASAAMAGFKVIEIPSNENGTVDLEALE---NAVSERTAGLMLTNPNTLGIFEDE 228
AHGTNPASA + G +V+ I + +G VD++ L S+ A LM+T P+T G+FE+
Sbjct: 611 AHGTNPASAQLCGMQVVIIKCDRSGNVDVDDLRMKAEKYSDSLAALMVTYPSTHGVFEEA 670
Query: 229 IEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGP 288
I EI +IVH GG +Y DGAN+N ++G +PG G D+ HLNLHKTF PHGGGGPG GP
Sbjct: 671 ITEICEIVHAHGGQVYTDGANMNALVGVAKPGRWGSDVSHLNLHKTFCIPHGGGGPGVGP 730
Query: 289 VGVKEFLKDYLPVPLVSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVMG 347
VK L +LP L + K +G V FG+ ++L + Y+ +MG
Sbjct: 731 CAVKAHLAPFLPKTLPLPGDAAGLPVQGTQEAK-VGMVSAANFGSASILPVSWMYITMMG 789
Query: 348 KDGLREVSEVAVLNANYLARKLKGTRGYELPHKE--------LRKHEVVFSAEPMKRETG 399
GLR+ ++VA+LNANY+A++L PH + L HE + P+++ +G
Sbjct: 790 AAGLRKATQVALLNANYIAKRL-------APHYKTLYTGRHGLVAHECILDVRPLEKVSG 842
Query: 400 VRTLDVAKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKIS------ 453
V D+AKRL+DFG HAPT+ FP V LM+EPTE+ S++ELD +V+AM +I
Sbjct: 843 VSAEDIAKRLIDFGFHAPTLSFP--VAGTLMVEPTESESQQELDRFVDAMIQIRGEIAAI 900
Query: 454 EEAYTNPE--VVKSAPHNTAVR 473
E+ + +PE +K APH TAV+
Sbjct: 901 EKGHLDPEDNPLKQAPH-TAVQ 921
>gi|4504013 glycine dehydrogenase (decarboxylating; glycine decarboxylase,
glycine cleavage system protein P) [Homo sapiens]
>gi|87571|pir||B39521 glycine dehydrogenase
(decarboxylating) (EC 1.4.4.2) precursor - human
>gi|190209|gb|AAA36463.1| (M64590) glycine decarboxylase
[Homo sapiens] >gi|219660|dbj|BAA14286.1| (D90239)
glycine decarboxylase precursor [Homo sapiens]
Length = 1020
Score = 312 bits (792), Expect = 4e-84
Identities = 179/455 (39%), Positives = 258/455 (56%), Gaps = 43/455 (9%)
Query: 41 KRKSPLNLPEV-----SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGH 95
KR SP +V SE +V++ +L + + + PLGSCTMK N
Sbjct: 514 KRTSPFLTHQVFNSYHSETNIVRYMKKLENKDISLVHSMIPLGSCTMKLNSSSELAPITW 573
Query: 96 PKVAYIHPYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYH 155
+ A IHP+ QG ++ ELE+ L E+TG D+ QP +GA GE+ G+ I+AY
Sbjct: 574 KEFANIHPFVPLDQAQGYQQLFRELEKDLCELTGYDQVCFQPNSGAQGEYAGLATIRAYL 633
Query: 156 LDRGETQRNEMLVPDSAHGTNPASAAMAGFKVIEIPSNENGTVD---LEALENAVSERTA 212
+GE R L+P SAHGTNPASA MAG K+ + ++ G +D L+A+ + E A
Sbjct: 634 NQKGEGHRTVCLIPKSAHGTNPASAHMAGMKIQPVEVDKYGNIDAVHLKAMVDKHKENLA 693
Query: 213 GLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLH 272
+M+T P+T G+FE+ I ++ ++H+ GG +Y DGAN+N +G RPGD G D+ HLNLH
Sbjct: 694 AIMITYPSTNGVFEENISDVCDLIHQHGGQVYLDGANMNAQVGICRPGDFGSDVSHLNLH 753
Query: 273 KTFSTPHGGGGPGAGPVGVKEFLKDYLP-VPLVSYDEENDRYYLDYDVPKSIGKVKEL-F 330
KTF PHGGGGPG GP+GVK+ L +LP P++S D +G V +
Sbjct: 754 KTFCIPHGGGGPGMGPIGVKKHLAPFLPNHPVISLKRNEDAC--------PVGTVSAAPW 805
Query: 331 GNFAVLVRALTYLKVMGKDGLREVSEVAVLNANYLARKL--------KGTRGYELPHKEL 382
G+ ++L + Y+K+MG GL++ +E A+LNANY+A++L +G RGY
Sbjct: 806 GSSSILPISWAYIKMMGGKGLKQATETAILNANYMAKRLETHYRILFRGARGYV------ 859
Query: 383 RKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEEL 442
HE + P K+ + +DVAKRL D+G HAPT+ +P V LM+EPTE+ K EL
Sbjct: 860 -GHEFILDTRPFKKSANIEAVDVAKRLQDYGFHAPTMSWP--VAGTLMVEPTESEDKAEL 916
Query: 443 DAYVEAMKKIS------EEAYTNPEV--VKSAPHN 469
D + +AM I EE +P V +K +PH+
Sbjct: 917 DRFCDAMISIRQEIADIEEGRIDPRVNPLKMSPHS 951
>sp|P23378|GCSP_HUMAN GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN) >gi|87570|pir||JN0124 glycine dehydrogenase
(decarboxylating) (EC 1.4.4.2) - human
>gi|190287|gb|AAA36478.1| (M63635) glycine decarboxylase
[Homo sapiens]
Length = 1020
Score = 312 bits (791), Expect = 6e-84
Identities = 179/455 (39%), Positives = 258/455 (56%), Gaps = 43/455 (9%)
Query: 41 KRKSPLNLPEV-----SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGH 95
KR SP +V SE +V++ +L + + + PLGSCTMK N
Sbjct: 514 KRTSPFLTHQVFNSYHSETNIVRYMKKLENKDISLVHSMIPLGSCTMKLNSSSELAPITW 573
Query: 96 PKVAYIHPYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYH 155
+ A IHP+ QG ++ ELE+ L E+TG D+ QP +GA GE+ G+ I+AY
Sbjct: 574 KEFANIHPFVPLDQAQGYQQLFRELEKDLCELTGHDQVCFQPNSGAQGEYAGLATIRAYL 633
Query: 156 LDRGETQRNEMLVPDSAHGTNPASAAMAGFKVIEIPSNENGTVD---LEALENAVSERTA 212
+GE R L+P SAHGTNPASA MAG K+ + ++ G +D L+A+ + E A
Sbjct: 634 NQKGEGHRTVCLIPKSAHGTNPASAHMAGMKIQPVEVDKYGNIDAVHLKAMVDKHKENLA 693
Query: 213 GLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLH 272
+M+T P+T G+FE+ I ++ ++H+ GG +Y DGAN+N +G RPGD G D+ HLNLH
Sbjct: 694 AIMITYPSTNGVFEENISDVCDLIHQHGGQVYLDGANMNAQVGICRPGDFGSDVSHLNLH 753
Query: 273 KTFSTPHGGGGPGAGPVGVKEFLKDYLP-VPLVSYDEENDRYYLDYDVPKSIGKVKEL-F 330
KTF PHGGGGPG GP+GVK+ L +LP P++S D +G V +
Sbjct: 754 KTFCIPHGGGGPGMGPIGVKKHLAPFLPNHPVISLKRNEDAC--------PVGTVSAAPW 805
Query: 331 GNFAVLVRALTYLKVMGKDGLREVSEVAVLNANYLARKL--------KGTRGYELPHKEL 382
G+ ++L + Y+K+MG GL++ +E A+LNANY+A++L +G RGY
Sbjct: 806 GSSSILPISWAYIKMMGGKGLKQATETAILNANYMAKRLETHYRILFRGARGYV------ 859
Query: 383 RKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEEL 442
HE + P K+ + +DVAKRL D+G HAPT+ +P V LM+EPTE+ K EL
Sbjct: 860 -GHEFILDTRPFKKSANIEAVDVAKRLQDYGFHAPTMSWP--VAGTLMVEPTESEDKAEL 916
Query: 443 DAYVEAMKKIS------EEAYTNPEV--VKSAPHN 469
D + +AM I EE +P V +K +PH+
Sbjct: 917 DRFCDAMISIRQEIADIEEGRIDPRVNPLKMSPHS 951
>sp|P33195|GCSP_ECOLI GLYCINE DEHYDROGENASE [DECARBOXYLATING] (GLYCINE DECARBOXYLASE)
(GLYCINE CLEAVAGE SYSTEM P-PROTEIN)
>gi|480419|pir||S36834 glycine dehydrogenase
(decarboxylating) (EC 1.4.4.2) - Escherichia coli
>gi|304892|gb|AAA23867.1| (L20872) gcvHP [Escherichia
coli] >gi|403345|emb|CAA52146.1| (X73958) glycine
dehydrogenase (decarboxylating) [Escherichia coli]
>gi|1789269|gb|AAC75941.1| (AE000373) glycine
decarboxylase, P protein of glycine cleavage system
[Escherichia coli K12]
Length = 957
Score = 312 bits (791), Expect = 6e-84
Identities = 161/408 (39%), Positives = 246/408 (59%), Gaps = 14/408 (3%)
Query: 52 SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQ 111
SE E++++ L + ++ + PLGSCTMK N P+ A +HP+ +
Sbjct: 484 SETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAE 543
Query: 112 GALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDS 171
G +++ +L WL ++TG D +QP +GA GE+ G++ I+ YH R E R+ L+P S
Sbjct: 544 GYQQMIAQLADWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPAS 603
Query: 172 AHGTNPASAAMAGFKVIEIPSNENGTVDLEALE---NAVSERTAGLMLTNPNTLGIFEDE 228
AHGTNPASA MAG +V+ + ++NG +DL L + + +M+T P+T G++E+
Sbjct: 604 AHGTNPASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEET 663
Query: 229 IEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGP 288
I E+ ++VH+ GG +Y DGAN+N +G PG +G D+ HLNLHKTF PHGGGGPG GP
Sbjct: 664 IREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGP 723
Query: 289 VGVKEFLKDYLPVPLVSYDEENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGK 348
+GVK L ++P V ++ + + FG+ ++L + Y+++MG
Sbjct: 724 IGVKAHLAPFVPGHSV--------VQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGA 775
Query: 349 DGLREVSEVAVLNANYLARKLKGTRGYELPHKELR-KHEVVFSAEPMKRETGVRTLDVAK 407
+GL++ S+VA+LNANY+A +L+ ++ R HE + P+K ETG+ LD+AK
Sbjct: 776 EGLKKASQVAILNANYIASRLQDAFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAK 835
Query: 408 RLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE 455
RL+D+G HAPT+ FP V LM+EPTE+ SK ELD +++AM I E
Sbjct: 836 RLIDYGFHAPTMSFP--VAGTLMVEPTESESKVELDRFIDAMLAIRAE 881
>gb|AAA69071.1| (U28377) ORF_f957 [Escherichia coli]
Length = 957
Score = 312 bits (791), Expect = 6e-84
Identities = 161/408 (39%), Positives = 246/408 (59%), Gaps = 14/408 (3%)
Query: 52 SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQ 111
SE E++++ L + ++ + PLGSCTMK N P+ A +HP+ +
Sbjct: 484 SETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAE 543
Query: 112 GALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDS 171
G +++ +L WL ++TG D +QP +GA GE+ G++ I+ YH R E R+ L+P S
Sbjct: 544 GYQQMIAQLADWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPAS 603
Query: 172 AHGTNPASAAMAGFKVIEIPSNENGTVDLEALE---NAVSERTAGLMLTNPNTLGIFEDE 228
AHGTNPASA MAG +V+ + ++NG +DL L + + +M+T P+T G++E+
Sbjct: 604 AHGTNPASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEET 663
Query: 229 IEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGP 288
I E+ ++VH+ GG +Y DGAN+N +G PG +G D+ HLNLHKTF PHGGGGPG GP
Sbjct: 664 IREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGP 723
Query: 289 VGVKEFLKDYLPVPLVSYDEENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGK 348
+GVK L ++P V ++ + + FG+ ++L + Y+++MG
Sbjct: 724 IGVKAHLAPFVPGHSV--------VQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGA 775
Query: 349 DGLREVSEVAVLNANYLARKLKGTRGYELPHKELR-KHEVVFSAEPMKRETGVRTLDVAK 407
+GL++ S+VA+LNANY+A +L+ ++ R HE + P+K ETG+ LD+AK
Sbjct: 776 EGLKKASQVAILNANYIASRLQDAFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAK 835
Query: 408 RLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE 455
RL+D+G HAPT+ FP V LM+EPTE+ SK ELD +++AM I E
Sbjct: 836 RLIDYGFHAPTMSFP--VAGTLMVEPTESESKVELDRFIDAMLAIRAE 881
>sp|Q09785|GCSP_SCHPO PUTATIVE GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL
PRECURSOR (GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE
SYSTEM P-PROTEIN) >gi|2130270|pir||S62435 probable
glycine dehydrogenase (decarboxylating) - fission yeast
(Schizosaccharomyces pombe) >gi|7492605|pir||T37641
probable glycine dehydrogenase (decarboxylating) -
fission yeast (Schizosaccharomyces pombe)
>gi|1008991|emb|CAA91099.1| (Z54308) putative glycine
dehydrogenase (decarboxylating) [Schizosaccharomyces
pombe]
Length = 1017
Score = 312 bits (790), Expect = 8e-84
Identities = 173/429 (40%), Positives = 252/429 (58%), Gaps = 23/429 (5%)
Query: 52 SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQ 111
SE E++++ L + + + PLGSCTMK N +P A IHPY E +
Sbjct: 545 SETELMRYIHHLQSKDLSLAHAMTPLGSCTMKLNAVTEMMPITNPLFANIHPYVPEEQAK 604
Query: 112 GALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDS 171
G ++ +L+ L ITG D QP +GA GE+TG+ +I+AY G+ RN L+P S
Sbjct: 605 GYRHVIEDLQLMLTTITGFDAACFQPNSGAAGEYTGLSVIRAYQRSIGQGHRNICLIPVS 664
Query: 172 AHGTNPASAAMAGFKVIEIPSNENGTVDLEALENAVS---ERTAGLMLTNPNTLGIFEDE 228
AHGTNPASAAMAGF VI + NG +D++ L+ S ++ A M+T P+T GIFE +
Sbjct: 665 AHGTNPASAAMAGFTVIPVKCLNNGYLDMQDLKEKASKHADKLAAFMVTYPSTFGIFEPD 724
Query: 229 IEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGP 288
++E +++H+ GG +Y+DGAN+N ++G + GD+G D+ HLNLHKTF PHGGGGPG GP
Sbjct: 725 VKEALEVIHEHGGQVYFDGANMNAMVGLCKAGDIGADVCHLNLHKTFCIPHGGGGPGVGP 784
Query: 289 VGVKEFLKDYLPV-PLVSYDEENDRYYLDYDVPKSIGKVKEL-FGNFAVLVRALTYLKVM 346
+ VK+ L D+LP P+VS +N I V FG+ +L + Y+++M
Sbjct: 785 ICVKKHLADFLPSHPVVSCGGKN-----------GITSVSSSPFGSAGILPISWAYMRMM 833
Query: 347 GKDGLREVSEVAVLNANYLARKLKGTRGYELPH---KELRKHEVVFSAEPMKRETGVRTL 403
G GLR+ S+ A+LNANY+A++L + Y+L + L HE + A K GV
Sbjct: 834 GLAGLRDASKAALLNANYMAKRL--SSHYKLVYTNKNNLCAHEFILDAREFKATAGVDAT 891
Query: 404 DVAKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEEAYTNPEVV 463
D+AKRL D+ HAPT+ +P + LMIEPTE+ S E+D + +A+ I +E E +
Sbjct: 892 DIAKRLQDYSFHAPTLSWP--IANTLMIEPTESESMYEMDRFCDALISIRQEIREIEEGL 949
Query: 464 KSAPHNTAV 472
+ +N V
Sbjct: 950 QPKDNNLLV 958
>gi|6323843 Glycine decarboxylase complex (P-subunit), glycine synthase
(P-subunit), Glycine cleavage system (P-subunit); Gcv2p
[Saccharomyces cerevisiae]
>gi|1346120|sp|P49095|GCSP_YEAST GLYCINE DEHYDROGENASE
[DECARBOXYLATING], MITOCHONDRIAL PRECURSOR (GLYCINE
DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM P-PROTEIN)
>gi|1078211|pir||S50917 aminomethyltransferase (EC
2.1.2.10) - yeast (Saccharomyces cerevisiae)
>gi|642281|emb|CAA87810.1| (Z47815) putative glycine
dehydrogenase [Saccharomyces cerevisiae]
>gi|676871|gb|AAB18933.1| (U20641) glycine decarboxylase
[Saccharomyces cerevisiae] >gi|1589242|prf||2210375A Gly
decarboxylase:SUBUNIT=P [Saccharomyces cerevisiae]
Length = 1034
Score = 311 bits (789), Expect = 1e-83
Identities = 185/465 (39%), Positives = 260/465 (55%), Gaps = 40/465 (8%)
Query: 30 EDVDVEIPEKLKRKSPLNLPEV-----SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKY 84
ED P + +R + EV SE ++++ RL + + + + PLGSCTMK
Sbjct: 522 EDYSNSFPREFQRTDEILRNEVFHMHHSETAMLRYLHRLQSRDLSLANSMIPLGSCTMKL 581
Query: 85 NPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAAGANGE 144
N + P+ + IHP+Q VQG ++ LE+ L ITG D +LQP +GA GE
Sbjct: 582 NSTVEMMPITWPQFSNIHPFQPSNQVQGYKELITSLEKDLCSITGFDGISLQPNSGAQGE 641
Query: 145 FTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFKVIEIPSNENGTVDLEALE 204
+TG+ +I++Y +GE RN L+P SAHGTNPASAAMAG KV+ + ++G++DL L+
Sbjct: 642 YTGLRVIRSYLESKGENHRNVCLIPVSAHGTNPASAAMAGLKVVPVNCLQDGSLDLVDLK 701
Query: 205 NAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLNGILGKVRPGD 261
N S+ A +M+T P+T G+FE I+ IVH GG +Y DGAN+N +G PGD
Sbjct: 702 NKAEQHSKELAAVMITYPSTYGLFEPGIQHAIDIVHSFGGQVYLDGANMNAQVGLTSPGD 761
Query: 262 MGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPLVSYDEENDRYYLDYDVPK 321
+G D+ HLNLHKTFS PHGGGGP P+ VK L +LP V D+
Sbjct: 762 LGADVCHLNLHKTFSIPHGGGGPAGAPICVKSHLIPHLPKHDV------------VDMIT 809
Query: 322 SIGKVKEL-------FGNFAVLVRALTYLKVMGKDGLREVSEVAVLNANYLARKLKGTRG 374
IG K + +GN VL + Y+K+MG +GL S +A+LN+NY+ +LK
Sbjct: 810 GIGGSKSIDSVSSAPYGNALVLPISYAYIKMMGNEGLPFSSVIAMLNSNYMMTRLKDHYK 869
Query: 375 Y----ELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLIVHEALM 430
E+ + HE + K + GV +DVAKRL D+G HAPT+ FP V LM
Sbjct: 870 ILFVNEMSTLKHCAHEFIVDLREYKAK-GVEAIDVAKRLQDYGFHAPTLAFP--VPGTLM 926
Query: 431 IEPTETVSKEELDAYVEAMKKISEE------AYTNPEVVKSAPHN 469
IEPTE+ + EELD + +AM I EE +++K+APH+
Sbjct: 927 IEPTESENLEELDRFCDAMISIKEEINALVAGQPKGQILKNAPHS 971
>pir||S70896 aminomethyltransferase (EC 2.1.2.10) - yeast (Saccharomyces
cerevisiae)
Length = 1034
Score = 311 bits (789), Expect = 1e-83
Identities = 185/465 (39%), Positives = 260/465 (55%), Gaps = 40/465 (8%)
Query: 30 EDVDVEIPEKLKRKSPLNLPEV-----SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKY 84
ED P + +R + EV SE ++++ RL + + + + PLGSCTMK
Sbjct: 522 EDYSNSFPREFQRTDEILRNEVFHMHHSETAMLRYLHRLQSRDLSLANSMIPLGSCTMKL 581
Query: 85 NPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAAGANGE 144
N + P+ + IHP+Q VQG ++ LE+ L ITG D +LQP +GA GE
Sbjct: 582 NSTVEMMPITWPQFSNIHPFQPSNQVQGYKELITSLEKDLCSITGFDGISLQPNSGAQGE 641
Query: 145 FTGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAMAGFKVIEIPSNENGTVDLEALE 204
+TG+ +I++Y +GE RN L+P SAHGTNPASAAMAG KV+ + ++G++DL L+
Sbjct: 642 YTGLRVIRSYLESKGENHRNVCLIPVSAHGTNPASAAMAGLKVVPVNCLQDGSLDLVDLK 701
Query: 205 NAV---SERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLNGILGKVRPGD 261
N S+ A +M+T P+T G+FE I+ IVH GG +Y DGAN+N +G PGD
Sbjct: 702 NKAEQHSKELAAVMITYPSTYGLFEPGIQHAIDIVHSFGGQVYLDGANMNAQVGLTSPGD 761
Query: 262 MGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPLVSYDEENDRYYLDYDVPK 321
+G D+ HLNLHKTFS PHGGGGP P+ VK L +LP V D+
Sbjct: 762 LGADVCHLNLHKTFSIPHGGGGPAGAPICVKSHLIPHLPKHDV------------VDMIT 809
Query: 322 SIGKVKEL-------FGNFAVLVRALTYLKVMGKDGLREVSEVAVLNANYLARKLKGTRG 374
IG K + +GN VL + Y+K+MG +GL S +A+LN+NY+ +LK
Sbjct: 810 GIGGSKSIDSVSSAPYGNALVLPISYAYIKMMGNEGLPFSSVIAMLNSNYMMTRLKDHYK 869
Query: 375 Y----ELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLIVHEALM 430
E+ + HE + K + GV +DVAKRL D+G HAPT+ FP V LM
Sbjct: 870 ILFVNEMSTLKHCAHEFIVDLREYKAK-GVEAIDVAKRLQDYGFHAPTLAFP--VPGTLM 926
Query: 431 IEPTETVSKEELDAYVEAMKKISEE------AYTNPEVVKSAPHN 469
IEPTE+ + EELD + +AM I EE +++K+APH+
Sbjct: 927 IEPTESENLEELDRFCDAMISIKEEINALVAGQPKGQILKNAPHS 971
>pir||T44754 probable glycine dehydrogenase (decarboxylating) (EC 1.4.4.2)
[imported] - Mycobacterium leprae
>gi|2578379|emb|CAA15464.1| (AL008609) glycine
dehydrogenase (decarboxylating) [Mycobacterium leprae]
Length = 952
Score = 311 bits (789), Expect = 1e-83
Identities = 169/408 (41%), Positives = 237/408 (57%), Gaps = 17/408 (4%)
Query: 52 SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQ 111
+E ++++ L++ + +D + PLGSCTMK N E + HP+
Sbjct: 479 TETSMMRYLRALADKDIALDRSMIPLGSCTMKLNAAAEMESITWQEFTRQHPFAPVSDTP 538
Query: 112 GALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDS 171
G R++ +LE WL +ITG D +LQP AG+ GE+ G++ I YH+ RGE RN L+P S
Sbjct: 539 GLRRLISDLESWLVQITGYDAVSLQPNAGSQGEYAGLLAIHDYHVSRGEPHRNVCLIPSS 598
Query: 172 AHGTNPASAAMAGFKVIEIPSNENGTVDLEALENAVSE---RTAGLMLTNPNTLGIFEDE 228
AHGTN ASAA+ G +V+ + ++NG VDL+ L +SE R + LM+T P+T G++E +
Sbjct: 599 AHGTNAASAALVGMRVVVVGCHDNGDVDLDDLRIKLSEHANRLSVLMITYPSTHGVYEHD 658
Query: 229 IEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGP 288
I EI VH AGG +Y DGANLN ++G RPG G D+ HLNLHKTF PHGGGGPG GP
Sbjct: 659 IAEICAAVHDAGGQVYVDGANLNALVGLARPGKFGGDVSHLNLHKTFCIPHGGGGPGVGP 718
Query: 289 VGVKEFLKDYLPVPLVSYDEENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGK 348
V V+ L +LP + ++P+ +G+ ++L Y+++MG
Sbjct: 719 VAVRSHLVSFLP-----------GHPFAPELPQGQPVSSAPYGSASLLPITWAYIRMMGA 767
Query: 349 DGLREVSEVAVLNANYLARKL-KGTRGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAK 407
DGLR S A+ +ANY+AR+L K + HE + P+ + GV DVAK
Sbjct: 768 DGLRTASLTAIASANYIARRLDKYFPVLYTGENGMVAHECILDLRPITKSVGVTVDDVAK 827
Query: 408 RLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE 455
RL D+G HAPT+ FP V LM+EPTE+ S E+DA+ EAM I E
Sbjct: 828 RLADYGFHAPTMSFP--VPGTLMVEPTESESLAEIDAFCEAMIAIRGE 873
>sp|Q50601|GCSP_MYCTU PROBABLE GLYCINE DEHYDROGENASE [DECARBOXYLATING] (GLYCINE
DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM P-PROTEIN)
>gi|7478080|pir||A70722 probable gcvB protein -
Mycobacterium tuberculosis (strain H37RV)
>gi|1483539|emb|CAB01470.1| (Z78020) gcvB [Mycobacterium
tuberculosis]
Length = 941
Score = 308 bits (780), Expect = 1e-82
Identities = 167/410 (40%), Positives = 239/410 (57%), Gaps = 21/410 (5%)
Query: 52 SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQ 111
+E ++++ L++ + +D + PLGSCTMK N E P+ HP+
Sbjct: 468 TETSMMRYLRALADKDIALDRSMIPLGSCTMKLNAAAEMESITWPEFGRQHPFAPASDTA 527
Query: 112 GALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDS 171
G +++ +L+ WL ITG D +LQP AG+ GE+ G++ I YH RGE R+ L+P S
Sbjct: 528 GLRQLVADLQSWLVLITGYDAVSLQPNAGSQGEYAGLLAIHEYHASRGEPHRDICLIPSS 587
Query: 172 AHGTNPASAAMAGFKVIEIPSNENGTVDLEALENAV---SERTAGLMLTNPNTLGIFEDE 228
AHGTN ASAA+AG +V+ + ++NG VDL+ L V +ER + LM+T P+T G++E +
Sbjct: 588 AHGTNAASAALAGMRVVVVDCHDNGDVDLDDLRAKVGEHAERLSALMITYPSTHGVYEHD 647
Query: 229 IEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGP 288
I EI VH AGG +Y DGANLN ++G RPG G D+ HLNLHKTF PHGGGGPG GP
Sbjct: 648 IAEICAAVHDAGGQVYVDGANLNALVGLARPGKFGGDVSHLNLHKTFCIPHGGGGPGVGP 707
Query: 289 VGVKEFLKDYLPVPLVSYDEENDRYYLDYDVPKSIGKVKELFGNFAVLVRALTYLKVMGK 348
V V+ L +LP + ++PK +G+ ++L Y+++MG
Sbjct: 708 VAVRAHLAPFLP-----------GHPFAPELPKGYPVSSAPYGSASILPITWAYIRMMGA 756
Query: 349 DGLREVSEVAVLNANYLARKLKGTRGYELPH---KELRKHEVVFSAEPMKRETGVRTLDV 405
+GLR S A+ +ANY+AR+L Y + + + HE + + + TG+ DV
Sbjct: 757 EGLRAASLTAITSANYIARRL--DEYYPVLYTGENGMVAHECILDLRGITKLTGITVDDV 814
Query: 406 AKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE 455
AKRL D+G HAPT+ FP V LM+EPTE+ S E+DA+ EAM I E
Sbjct: 815 AKRLADYGFHAPTMSFP--VAGTLMVEPTESESLAEVDAFCEAMIGIRAE 862
>pir||D81821 glycine dehydrogenase (decarboxylating) (EC 1.4.4.2) NMA1934
[imported] - Neisseria meningitidis (group A strain
Z2491) >gi|7380566|emb|CAB85154.1| (AL162757) glycine
dehydrogenase [Neisseria meningitidis Z2491]
Length = 950
Score = 304 bits (771), Expect = 1e-81
Identities = 168/437 (38%), Positives = 251/437 (56%), Gaps = 32/437 (7%)
Query: 52 SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQ 111
+E E++++ +L + + ++ + LGSCTMK N + + IHPY E
Sbjct: 474 TEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNATAEMLPITWAEFSDIHPYAPEAQTA 533
Query: 112 GALRIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNEMLVPDS 171
G ++ ++E LK ITG D +LQP +GA GE+TG++ I+ Y +GE RN L+P S
Sbjct: 534 GYRELLADMENSLKAITGFDAISLQPNSGAQGEYTGMLSIRRYQEAQGEAHRNICLIPKS 593
Query: 172 AHGTNPASAAMAGFKVIEIPSNENGTV---DLEALENAVSERTAGLMLTNPNTLGIFEDE 228
AHGTNPA+AAM G KV+ + ++E+G V DL+A + + +M+T P+T G++E+
Sbjct: 594 AHGTNPATAAMLGLKVVVVDTDEHGNVNIDDLKAKAEQHRDALSAIMITYPSTHGVYEEG 653
Query: 229 IEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTPHGGGGPGAGP 288
I +I +I+H+ GG +Y DGANLN +G ++P ++G D++H+NLHKTF PHGGGGPG GP
Sbjct: 654 IRDICRIIHENGGQVYMDGANLNAQIGIMQPAEVGADVLHMNLHKTFCIPHGGGGPGMGP 713
Query: 289 VGVKEFLKDYLPVPLVSYDEENDRYYLDYDVPKSIGK---VKELFGNFAVLVRALTYLKV 345
+G+K L + P + L S G+ +G+ ++L YL +
Sbjct: 714 IGLKAHLAPFAP-----------GHTLTDTHSASAGQTAVAAAAYGSASILPITWMYLTM 762
Query: 346 MGKDGLREVSEVAVLNANYLARKLKGTRGYELPHKELR-KHEVVFSAEPMKRETGVRTLD 404
MGK G+ + + A+LNANY+A++L K R HE + P+K E+G+ D
Sbjct: 763 MGKQGMEQATRWALLNANYVAKRLSEDYPILYTGKNGRVAHECIVDLRPLKAESGITETD 822
Query: 405 VAKRLLDFGMHAPTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEEAY------- 457
+AKRL+D+G HAPT+ FP V LMIEPTE+ SK ELD ++ +K I E
Sbjct: 823 IAKRLMDYGFHAPTVSFP--VAGTLMIEPTESESKAELDRFIATLKSIRREVQKVIDGEW 880
Query: 458 ---TNPEVVKSAPHNTA 471
NP V +APH A
Sbjct: 881 PKDDNPLV--NAPHTAA 895
>emb|CAA72255.1| (Y11467) putative glycine dehydrogenase [Thermus thermophilus]
Length = 229
Score = 159 bits (399), Expect = 5e-38
Identities = 80/139 (57%), Positives = 99/139 (70%), Gaps = 2/139 (1%)
Query: 10 PLIFELSRPGRVGYTLPKPIEDVDVEIPEKLKRKSPLNLPEVSEPEVVKHYTRLSEMNYG 69
PLIFE SR GR G L K + + IP++ +R+ P LPEV E +V+HYT LS G
Sbjct: 4 PLIFERSRKGRRGLKLVKAVPKAEDLIPKEHQREVPPRLPEVDELTLVRHYTGLSRRQVG 63
Query: 70 VDSGIYPLGSCTMKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKEITG 129
VD+ YPLGSCTMKYNPK++EE A A +HPYQD RT QGALR+MWEL ++LK +TG
Sbjct: 64 VDTTFYPLGSCTMKYNPKLHEEAA--RLFADLHPYQDPRTAQGALRLMWELGEYLKALTG 121
Query: 130 MDRFTLQPAAGANGEFTGV 148
MD TL+PAAGA+GE TG+
Sbjct: 122 MDAITLEPAAGAHGELTGI 140
>pir||C71216 probable glycine dehydrogenase subunit 1 - Pyrococcus horikoshii
>gi|3258439|dbj|BAA31122.1| (AP000007) 449aa long
hypothetical glycine dehydrogenase subunit 1 [Pyrococcus
horikoshii]
Length = 449
Score = 108 bits (267), Expect = 2e-22
Identities = 125/446 (28%), Positives = 201/446 (45%), Gaps = 43/446 (9%)
Query: 29 IEDVDVEIPEKLKRKSPLNLPE-VSEPEVVKHYTRLSEMNYGVDSGIYPLGSCT-MKYNP 86
IE++ +IPEK K LNLPE SE EV + E N V LG+ T Y P
Sbjct: 24 IEELFADIPEKFI-KEELNLPEGKSEYEVFLEMNEILEKNKTVLEMPTFLGAGTYFHYIP 82
Query: 87 KINEELAGHPKVAYIH-PYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAAGANGEF 145
+ L + + PYQ E + QG L+ ++E + + E+ G+ P ++
Sbjct: 83 AHVKHLIERSEFLTSYTPYQPEIS-QGMLQALFEYQSLIAELVGL------PVVNSSMYD 135
Query: 146 TGVMIIKA----YHLDRGETQRNEMLVPDSAHGTN----PASAAMAGFKVIEIPSNENGT 197
G + +A L +G+ R + +VP H +++ + NE G
Sbjct: 136 WGTAMAEAALMTVRLHKGK--RKKFVVPKHTHPERLQVLRTYTRGPEVEIVTVNWNERGQ 193
Query: 198 VDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLNGILGKV 257
VD+E L+ V + AG+ + PN G+ E+EI E+ +I H+AG Y+ ILG V
Sbjct: 194 VDVEDLKEKVKD-AAGVYIEIPNFFGLLEEEIREVGEIAHEAGA--YFVVGVDPTILGIV 250
Query: 258 R-PGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVP----LVSYDEENDR 312
PG++G DIV + F P GGP AG VK +K +P ++ D E R
Sbjct: 251 EAPGELGADIV-VGEASYFGNPMNFGGPRAGIFAVKNDMKLIRQMPGRIIGMTKDAEGKR 309
Query: 313 YYL------DYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREVSEVAVLNANYLA 366
++ + + ++ V V A ++ +G G+RE+ EV + N YL
Sbjct: 310 AFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPKGIRELGEVILKNTAYLK 369
Query: 367 RKLKGTRGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLIVH 426
++L E+P + +V+ + RE L KR + G + + +FP +
Sbjct: 370 KRLSEVA--EIPFDGVNFKDVLVRFDKPYREIHEELL---KRNIHGGYYVGS-HFPEL-G 422
Query: 427 EALMIEPTETVSKEELDAYVEAMKKI 452
EA + TET KE +DA + A+K++
Sbjct: 423 EAALFAATETTRKEWVDALISALKEV 448
>pir||E75030 probable glycine dehydrogenase (decarboxylating) (EC 1.4.4.2) chain
1 PAB1171 - Pyrococcus abyssi (strain Orsay)
>gi|5459197|emb|CAB50683.1| (AJ248288) GLYCINE
DEHYDROGENASE (DECARBOXYLATING) SUBUNIT 1 (EC 1.4.4.2)
(GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
P-PROTEIN). [Pyrococcus abyssi]
Length = 449
Score = 102 bits (252), Expect = 9e-21
Identities = 124/452 (27%), Positives = 201/452 (44%), Gaps = 55/452 (12%)
Query: 29 IEDVDVEIPEKLKRKSPLNLPE-VSEPEVVKHYTRLSEMNYGVDSGIYPLGSCT------ 81
I+++ +IP K R LNLPE SE EV + N V LG+ T
Sbjct: 24 IDELFADIPGKFIRDE-LNLPEGKSEYEVFLEMNEILGKNKTVLEMPTFLGAGTYFHYIP 82
Query: 82 --MKYNPKINEELAGHPKVAYIHPYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAA 139
+KY + +E L + PYQ E + QG L+ ++E + + E+ G+ P
Sbjct: 83 AHVKYLIERSEFLTAYT------PYQPEIS-QGMLQALFEYQSLIAELVGL------PVV 129
Query: 140 GANGEFTGVMIIKA----YHLDRGETQRNEMLVPDSAHGTN----PASAAMAGFKVIEIP 191
A+ G + +A L RG+ R + +VP H A G ++ +
Sbjct: 130 NASMYDWGTAMAEAALMTVRLHRGK--RKKFIVPRHTHPERLQVLETYAKGPGVEIETVK 187
Query: 192 SNENGTVDLEALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLN 251
NE G VD+E L+ V + AG+ + PN G+ E+E+ EI +I H+AG Y+
Sbjct: 188 WNERGQVDIEDLKEKVKD-AAGVYVEIPNFFGLLEEEVREIGEIAHEAGA--YFVVGVDP 244
Query: 252 GILGKVR-PGDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVP----LVSY 306
ILG V PG++G DIV + F P GGP AG V+ +K +P ++
Sbjct: 245 TILGIVEAPGELGADIV-VGEASYFGNPMNFGGPRAGIFAVRNDMKLIRQMPGRLIGMTK 303
Query: 307 DEENDRYYL------DYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREVSEVAVL 360
D E R ++ + + ++ V V A ++ +G G+RE+ EV +
Sbjct: 304 DAEGKRAFVMTLQTREQHIRRAKATSNICSNEALVAVAAAIHIASLGPRGIRELGEVILK 363
Query: 361 NANYLARKLKGTRGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIY 420
N YL ++L E+P + +V+ E +E L KR + G + +
Sbjct: 364 NTAYLKKRLSEVA--EIPFDGVNFKDVLVRFEKPYKEIHEELL---KRNIHGGYYVGK-H 417
Query: 421 FPLIVHEALMIEPTETVSKEELDAYVEAMKKI 452
FP + E+ + TET KE +DA + A++++
Sbjct: 418 FPEL-GESALFAATETTRKEWVDALISALREV 448
>sp|P54376|GCS1_BACSU PROBABLE GLYCINE DEHYDROGENASE [DECARBOXYLATING] SUBUNIT 1 (GLYCINE
DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM P-PROTEIN)
>gi|7451835|pir||A69959 glycine dehydrogenase homolog
yqhJ - Bacillus subtilis >gi|1303891|dbj|BAA12547.1|
(D84432) YqhJ [Bacillus subtilis]
>gi|2634890|emb|CAB14387.1| (Z99116) similar to glycine
dehydrogenase [Bacillus subtilis]
Length = 448
Score = 96.0 bits (235), Expect = 9e-19
Identities = 114/441 (25%), Positives = 195/441 (43%), Gaps = 42/441 (9%)
Query: 29 IEDVDVEIPEKLKRKSPLNLPEV-SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMK-YNP 86
I+D+ +IPE +K K + + SE E+ + T+L+ N LG+ Y P
Sbjct: 25 IDDLFADIPENVKYKKEHQIKKAKSETELTRELTKLASKNRDTVQYASFLGAGVYDHYQP 84
Query: 87 KINEELAGHPK--VAYIHPYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAAGANGE 144
I + + + AY PYQ E + QG L+ ++E + + E+TGMD A ++
Sbjct: 85 VIVDHVISRSEFYTAYT-PYQPEIS-QGELQAIFEFQTMICELTGMD------IANSSMY 136
Query: 145 FTGVMIIKAYHLDRGETQRNEMLVPDSAHGTN----PASAAMAGFKVIEIPSNENGTVDL 200
G + +A L G T++ +++V + H + A V+E+P+ + G DL
Sbjct: 137 DGGTALAEAAMLASGHTKKKKIVVSKTVHPESREVLKTYAKGQYIDVVEVPAAD-GVTDL 195
Query: 201 EALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLNGILGKVRPG 260
+AL V E TA +++ PN G E +++I I H+ G ++ AN + PG
Sbjct: 196 DALRQTVCENTAAVIVQYPNFFGRIE-PLKDIEPIAHQ-GKSMFIVSANPLALGLLTPPG 253
Query: 261 DMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPLV--SYDEENDRYYL--- 315
DIV + H+ F P GGP G V + L +P LV + DE R ++
Sbjct: 254 KFQSDIVVGDAHR-FGIPSAYGGPHCGFFAVTKKLMRKVPGRLVGQTEDENGKRGFVLTL 312
Query: 316 ---DYDVPKSIGKVKELFGNFAVLVRALTYLKVMGKDGLREVSEVAVLNANYLARKLKGT 372
+ + + + A + +GK+G+++++ +L ANY ++ K
Sbjct: 313 QAREQHIRRDKATSNICSNQALNALAASVAMTALGKNGVKDIARQNLLKANYAKQEAKKA 372
Query: 373 RGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGM----HAPTIYFPLIVHEA 428
+ + V+ EP++ V KRLL GM Y L H
Sbjct: 373 GLTVMFDGPMFNEFVIKLDEPVRA--------VNKRLLAKGMIGGYDLGLTYPELDCH-- 422
Query: 429 LMIEPTETVSKEELDAYVEAM 449
++I TE +KEE+DA ++ +
Sbjct: 423 MLIAVTELRTKEEIDALIQEL 443
>pir||G72403 glycine dehydrogenase (decarboxylating) subunit 1 - Thermotoga
maritima (strain MSB8)
>gi|4980711|gb|AAD35305.1|AE001706_4 (AE001706) glycine
dehydrogenase (decarboxylating) subunit 1 [Thermotoga
maritima]
Length = 437
Score = 84.7 bits (206), Expect = 2e-15
Identities = 117/438 (26%), Positives = 190/438 (42%), Gaps = 41/438 (9%)
Query: 29 IEDVDVEIPEKLKRKSPLNLPEV-SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMK-YNP 86
IE++ IP + +S LN+PE E V K +SEMN ++ LG+ K Y P
Sbjct: 25 IEELFSSIP--VSARSSLNIPESRDEFSVFKQLKEISEMNNSLEDYAVFLGAGVYKRYVP 82
Query: 87 KINEELAGHPKVAYIH-PYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAAGANGEF 145
+ +LA P + PYQ E + QG L+ ++E + + E+TGM+ GA
Sbjct: 83 TVVYDLAMKPDFLTAYTPYQAEVS-QGTLQALFEYQTMVCELTGMEVANASMYDGATA-- 139
Query: 146 TGVMIIKAYHLDRGETQRNEMLVPDSAHGTNPASAAM----AGFKVIEIPSNENGTVDLE 201
+ +A + T + +++V S H A GF V+E +E G V LE
Sbjct: 140 ----LAEAALMSFRLTGKEKVVVARSVHPEYRAVLRTYLEKRGFTVVEAGYDETGRVLLE 195
Query: 202 ALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLNGILGKVRPGD 261
V E TA + + PN GI ED + + ++G L + PG
Sbjct: 196 E----VDEETAAIAVQYPNFFGIIED----LDYVRSRSGNALLIVVVEPVSLALLEPPGS 247
Query: 262 MGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPLVSYDEE---NDRYYLDYD 318
G DIV + ++ P GG G +E +P L+ + N Y +
Sbjct: 248 YGADIV-VGEGQSLGLPMWFGGYSLGIFATREEYVRQMPGRLIGQTVDQAGNTAYTMILQ 306
Query: 319 VPKSIGKVKELFGNF------AVLVRALTYLKVMGKDGLREVSEVAVLNANYLARKLKGT 372
+ + N A L+ A+ Y+ VMG DGL+EV+ + A+YL +L+
Sbjct: 307 TREQHIRRARATSNICSNHAHAALIAAV-YMSVMGPDGLKEVARRSYNAAHYLQERLEEI 365
Query: 373 RGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLIVHEALMIE 432
G++L +E VF+ + + ++ K++L G ++P + AL
Sbjct: 366 -GFKLCFSGEFFNEFVFNVPEDYPDRWRKMME--KKIL--GPLPLEEFYPELGDTALAC- 419
Query: 433 PTETVSKEELDAYVEAMK 450
TE +SKE+++ +EAMK
Sbjct: 420 ATEVISKEDIEKLLEAMK 437
>dbj|BAB06534.1| (AP001516) glycine dehydrogenase subunit 1 [Bacillus halodurans]
Length = 447
Score = 83.9 bits (204), Expect = 4e-15
Identities = 108/436 (24%), Positives = 196/436 (44%), Gaps = 36/436 (8%)
Query: 29 IEDVDVEIPEKLKRKSPLNLPE-VSEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMK-YNP 86
IE++ +IP+ ++ K LN+P + EPE+++++ +L+ N + LG+ Y P
Sbjct: 25 IEELFSDIPQDIRFKGKLNIPNALKEPELIRYFQQLANENVHLKDKASFLGAGVYDHYIP 84
Query: 87 KINEELAGHPK--VAYIHPYQDERTVQGALRIMWELEQWLKEITGMDRFTLQPAAGANGE 144
I + + + AY PYQ E + QG L+ ++E + + E+TGM+ A ++
Sbjct: 85 SIVDHVISRSEFYTAYT-PYQPEIS-QGELQAIFEFQTMICELTGME------VANSSMY 136
Query: 145 FTGVMIIKAYHLDRGETQRNEMLVPDSAH----GTNPASAAMAGFKVIEIPSNENGTVDL 200
+ +A + G T++ ++LV + H +A +V+EI +N NG D+
Sbjct: 137 DGPTALAEAAMMSCGHTKKKKILVSKAVHPEARDVLMTNAYGQRLEVVEIDTN-NGVTDV 195
Query: 201 EALENAVSERTAGLMLTNPNTLGIFEDEIEEIAKIVHKAGGLLYYDGANLNGILGKVR-P 259
E L+ E TA +++ +PN G E + EI + H+ L LG ++ P
Sbjct: 196 EHLKALYDEETACVIVQHPNFFGRLE-PLAEIESVSHQGKATFVVSSNPL--ALGLLKPP 252
Query: 260 GDMGFDIVHLNLHKTFSTPHGGGGPGAGPVGVKEFLKDYLPVPLV--SYDEENDR-YYLD 316
G G D+V + + F P GGP G + L +P LV + D++ R + L
Sbjct: 253 GAFGADVV-VGDAQPFGIPTQYGGPHCGYFATTKKLMRKVPGRLVGQTTDDQGQRGFVLT 311
Query: 317 YDVPKSIGKVKELFGNFAV-----LVRALTYLKVMGKDGLREVSEVAVLNANYLARKLKG 371
+ + ++ N + A + +GK G++E++ V A Y +LK
Sbjct: 312 LQAREQHIRREKATSNICSNQALNALAAAVAMATIGKRGVKEMALQNVQKAAYAKSQLK- 370
Query: 372 TRGYELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHAPTIYFPLIVHEALMI 431
G E+ + +E + E V +AK + G +Y L H +++
Sbjct: 371 ANGVEIVAEGPCFNEFIIKLSSPLHE--VEEALLAKGFI-AGYDLGKVYPELEGH--MLV 425
Query: 432 EPTETVSKEELDAYVE 447
TE +KEE+D + +
Sbjct: 426 AVTEVRTKEEIDQFAK 441
>pir||G72518 probable glycine dehydrogenase subunit 1 APE2124 - Aeropyrum pernix
(strain K1) >gi|5105823|dbj|BAA81135.1| (AP000063) 471aa
long hypothetical glycine dehydrogenase subunit 1
[Aeropyrum pernix]
Length = 471
Score = 81.9 bits (199), Expect = 2e-14
Identities = 108/426 (25%), Positives = 188/426 (43%), Gaps = 42/426 (9%)
Query: 51 VSEPEVVKHYTR-LSEMNYGVDSGIYPLGSCTMKYNPKINEELA--GHPKVAYIHPYQDE 107
+SE EV+ LS Y D + G +Y P + + L G AY PYQ E
Sbjct: 61 LSEAEVLARINDILSRNKYFTDPPPFVGGGVWPRYVPSVVKALITRGEFLTAYT-PYQAE 119
Query: 108 RTVQGALRIMWELEQWLKEITGMD--RFTLQPAAGANGEFTGVMIIKAYHLDRGETQRNE 165
+ QG ++ ++E + + E+ M+ +L + A GE A + R T+RN
Sbjct: 120 IS-QGLMQALFEYQSLVAELLEMEVVNASLYDWSSAVGE--------AMLMARRVTRRNR 170
Query: 166 MLVPDSAHGTNPASAAM----AGFKVIEIP-SNENGTVDLEALENAVSER-TAGLMLTNP 219
+LVP++ + + +A G +V ++ E G +DLE LE+ +S+ TA L + P
Sbjct: 171 VLVPETMNPLHLETATTYAYGGGIRVEKVRVDRETGFIDLEDLESRLSQGDTAALYMEYP 230
Query: 220 NTL-GIFEDEIEEIAKIVHKAGGLLYYDGANLNGILGKVRPGDMGFDIVHLNLHKTFSTP 278
++ G+ ++ +E + VHKAGGL ++ + K PG +G DI + +
Sbjct: 231 SSYTGVIDENVEAAGEAVHKAGGLFILGVEPVSMAILKP-PGRLGADIA-VGDGQPLGLG 288
Query: 279 HGGGGPGAGPVGVK--EFLKDYLPVPLV--SYDEENDRYYL------DYDVPKSIGKVKE 328
GGP G V+ L +P L+ + D E R + + + ++
Sbjct: 289 LNYGGPYLGVFAVRWDGRLVRQMPGRLIGMTVDAEGRRAFAMILQTREQHIRRAKATSNI 348
Query: 329 LFGNFAVLVRALTYLKVMGKDGLREVSEVAVLNANYLARKLKGTRGYELPHKELRKHEVV 388
+ + A YL ++G GLREV+E + ++Y A++L RG E P L ++
Sbjct: 349 TTNEALMAIAAAVYLSLLGPQGLREVAEASWYMSHYAAKRLSELRGVEAP--LLEGEFIM 406
Query: 389 FSAEPMKRETGVRTLDVAKRLLDFGMHA--PTIYFPLIVHEALMIEPTETVSKEELDAYV 446
+ + GV +RLL+ G+ A P F +++ TE ++ +D V
Sbjct: 407 DFTVRLPMDAGV----ARRRLLEKGVLAGIPLGGFSFFSDNDMLLTVTEAHTRRHVDLLV 462
Query: 447 EAMKKI 452
+ +
Sbjct: 463 NLLDSV 468
>gb|AAD33990.1|AF147718_1 (AF147718) glycine decarboxylase [Rattus norvegicus]
Length = 106
Score = 72.2 bits (174), Expect = 1e-11
Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 359 VLNANYLARKLKGTRG--YELPHKELRKHEVVFSAEPMKRETGVRTLDVAKRLLDFGMHA 416
+L+ANY++ +L+ Y H + HE + P K TGV DVAKRL+D+ HA
Sbjct: 3 ILSANYISARLRDHYPTLYAGEHGHVA-HECILDLRPFKESTGVMAEDVAKRLIDYSFHA 61
Query: 417 PTIYFPLIVHEALMIEPTETVSKEELDAYVEAMKKISEE 455
P + FP V LM+EPTE+ S ELD +V+AM I E
Sbjct: 62 PALSFP--VPNTLMVEPTESESLYELDRFVDAMIAIRGE 98
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.316 0.137 0.397
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 205143405
Number of Sequences: 2977
Number of extensions: 9560359
Number of successful extensions: 19582
Number of sequences better than 1.0e-10: 49
Number of HSP's better than 0.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 19343
Number of HSP's gapped (non-prelim): 64
length of query: 502
length of database: 189,106,746
effective HSP length: 57
effective length of query: 445
effective length of database: 154,992,987
effective search space: 68971879215
effective search space used: 68971879215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (22.0 bits)
S2: 167 (69.5 bits)