BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1182 (atpE) DE:H+-transporting ATP synthase, subunit E
(atpE)
(199 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75028 h+-transporting ATP synthase, chain E (atpe) PAB1182... 377 e-104
pir||B71214 hypothetical protein PH1978 - Pyrococcus horikoshii ... 316 1e-85
pir||T44671 H+-transporting ATP synthase, chain E [imported] - D... 252 3e-66
pir||B69228 ATP synthase, subunit E - Methanobacterium thermoaut... 132 2e-30
sp|Q57673|ATPE_METJA ATP SYNTHASE, SUBUNIT E >gi|2127952|pir||E6... 108 5e-23
gi|11498763 H+-transporting ATP synthase, subunit E (atpE) [Arch... 95 6e-19
sp|Q48329|ATPE_HALVO ATP SYNTHASE, SUBUNIT E >gi|11267058|pir||T... 87 2e-16
sp|P31402|VATE_MANSE VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E... 82 3e-15
pir||S25014 H+-transporting ATPase (EC 3.6.1.35) 28K chain - tob... 82 3e-15
sp|O13687|VATE_SCHPO PROBABLE VACUOLAR ATP SYNTHASE SUBUNIT E (V... 73 2e-12
gb|AAG20280.1| (AE005102) H+-transporting ATP synthase subunit E... 73 2e-12
emb|CAB62552.1| (AJ249961) vacuolar ATPase subunit E [Heterodera... 70 2e-11
sp|P54611|VATE_DROME VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E... 69 3e-11
sp|Q60183|ATPE_METMA ATP SYNTHASE, SUBUNIT E >gi|11267061|pir||T... 69 3e-11
>pir||G75028 h+-transporting ATP synthase, chain E (atpe) PAB1182 - Pyrococcus
abyssi (strain Orsay) >gi|5459183|emb|CAB50669.1|
(AJ248288) H+-transporting ATP synthase, subunit E
(atpE) [Pyrococcus abyssi]
Length = 199
Score = 377 bits (957), Expect = e-104
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MSGAELIIQEINREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEK 60
MSGAELIIQEINREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEK
Sbjct: 1 MSGAELIIQEINREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEK 60
Query: 61 QRIIANARLEVRRKRLAVQEEIIRNVLDEVRKRLQEMPEEEYFESIKALLKEAVEELKEG 120
QRIIANARLEVRRKRLAVQEEIIRNVLDEVRKRLQEMPEEEYFESIKALLKEAVEELKEG
Sbjct: 61 QRIIANARLEVRRKRLAVQEEIIRNVLDEVRKRLQEMPEEEYFESIKALLKEAVEELKEG 120
Query: 121 KVRVYSNERTLALISSRIEEIRDYLGSISIEIGSAISTMGGVIVETEDGRIRIDNTFEAR 180
KVRVYSNERTLALISSRIEEIRDYLGSISIEIGSAISTMGGVIVETEDGRIRIDNTFEAR
Sbjct: 121 KVRVYSNERTLALISSRIEEIRDYLGSISIEIGSAISTMGGVIVETEDGRIRIDNTFEAR 180
Query: 181 MERFEGEIRAKIAKVLFGG 199
MERFEGEIRAKIAKVLFGG
Sbjct: 181 MERFEGEIRAKIAKVLFGG 199
>pir||B71214 hypothetical protein PH1978 - Pyrococcus horikoshii
>gi|3258422|dbj|BAA31105.1| (AP000007) 198aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 198
Score = 316 bits (800), Expect = 1e-85
Identities = 159/198 (80%), Positives = 183/198 (92%)
Query: 1 MSGAELIIQEINREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEK 60
M+GAELIIQEIN+EAERKIEYILNEAR++AEKIKEEA+R AE+KAEWI+RRAKTQAELEK
Sbjct: 1 MNGAELIIQEINKEAERKIEYILNEARQQAEKIKEEARRNAEAKAEWIIRRAKTQAELEK 60
Query: 61 QRIIANARLEVRRKRLAVQEEIIRNVLDEVRKRLQEMPEEEYFESIKALLKEAVEELKEG 120
QRIIANARLEVRRKRLA+QEEII +VL+EV++RL+ M E+EYFES+KALLKEA++EL E
Sbjct: 61 QRIIANARLEVRRKRLAIQEEIISSVLEEVKRRLETMSEDEYFESVKALLKEAIKELNEK 120
Query: 121 KVRVYSNERTLALISSRIEEIRDYLGSISIEIGSAISTMGGVIVETEDGRIRIDNTFEAR 180
KVRV SNE+TL LI+SRIEEI+ LG +SIE+G + TMGGVIVETEDGRIRIDNTFEAR
Sbjct: 121 KVRVMSNEKTLGLIASRIEEIKSELGDVSIELGETVDTMGGVIVETEDGRIRIDNTFEAR 180
Query: 181 MERFEGEIRAKIAKVLFG 198
MERFEGEIR+ IAKVLFG
Sbjct: 181 MERFEGEIRSTIAKVLFG 198
>pir||T44671 H+-transporting ATP synthase, chain E [imported] - Desulfurococcus
sp. (strain SY) >gi|2104723|gb|AAB64413.1| (U96487)
V-ATPase E subunit [Desulfurococcus sp. SY]
Length = 203
Score = 252 bits (636), Expect = 3e-66
Identities = 125/203 (61%), Positives = 165/203 (80%), Gaps = 5/203 (2%)
Query: 1 MSGAELIIQEINREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEK 60
M GAELIIQEINREAE+KI+YIL+EA+EEAEK+KEEA++RAE+KAEWILR+AKTQAE+EK
Sbjct: 1 MEGAELIIQEINREAEQKIQYILSEAKEEAEKLKEEARKRAEAKAEWILRKAKTQAEIEK 60
Query: 61 QRIIANARLEVRRKRLAVQEEIIRNVLDEVRKRLQEMPEEEYFESIKALLKEAVEELKEG 120
QRIIANA+LEVR+K+LAVQEE+IR+V++ +++RL +PE+EYF + L +AVEEL
Sbjct: 61 QRIIANAKLEVRKKKLAVQEELIRSVIESLKERLANLPEDEYFPMLVELTVKAVEELGTD 120
Query: 121 KVRVYSNERTLALISSRIEEIRDYL-----GSISIEIGSAISTMGGVIVETEDGRIRIDN 175
KV V SNERTL LI R+ E R+ L + + +G I T+GG++VE+ DG +R+DN
Sbjct: 121 KVVVRSNERTLKLIVERLSEFREKLREALGKDVEVTVGEPIQTIGGILVESSDGTVRVDN 180
Query: 176 TFEARMERFEGEIRAKIAKVLFG 198
TF++R+ERFE ++RA IAK LFG
Sbjct: 181 TFDSRIERFESDLRATIAKALFG 203
>pir||B69228 ATP synthase, subunit E - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622055|gb|AAB85454.1| (AE000869)
ATP synthase, subunit E [Methanobacterium
thermoautotrophicum]
Length = 206
Score = 132 bits (330), Expect = 2e-30
Identities = 76/203 (37%), Positives = 123/203 (60%), Gaps = 7/203 (3%)
Query: 2 SGAELIIQEINREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEKQ 61
SGAE I+ I EA+ K + I+ EA +EA I +E ++RA +E IL A+ QA++ Q
Sbjct: 3 SGAEKIVSSIMSEAQAKADAIIREAEDEAAGIVDEGEKRARMASERILESARKQADMRYQ 62
Query: 62 RIIANARLEVRRKRLAVQEEIIRNVL---DEVRKRLQEMPEEEYFESIKALLKEAVEELK 118
+II+ A++ RR L +EE+I+ +E K L +EEY +++ ++KEA E+
Sbjct: 63 QIISEAKMNARRAELEAREEVIQEAFKKAEEELKNLASTSQEEYVSALRGMIKEAAVEIG 122
Query: 119 EGK--VRVYSNERTLALISSRI-EEIRDYLG-SISIEIGSAISTMGGVIVETEDGRIRID 174
G V + ++R+L L +I E+ G ++++G +I T+GG +V TEDG I ++
Sbjct: 123 GGDLVVSMREDDRSLDLGLDKIAAEVEAETGKKTTLKVGDSIRTIGGAVVRTEDGLIEVN 182
Query: 175 NTFEARMERFEGEIRAKIAKVLF 197
NT EARM RF +R+++A+VLF
Sbjct: 183 NTIEARMSRFRKALRSEVARVLF 205
>sp|Q57673|ATPE_METJA ATP SYNTHASE, SUBUNIT E >gi|2127952|pir||E64327 H+-transporting ATP
synthase (EC 3.6.1.34) subunit E - Methanococcus
jannaschii >gi|1590957|gb|AAB98203.1| (U67477)
H+-transporting ATP synthase, subunit E (atpE)
[Methanococcus jannaschii]
Length = 206
Score = 108 bits (267), Expect = 5e-23
Identities = 66/204 (32%), Positives = 116/204 (56%), Gaps = 7/204 (3%)
Query: 1 MSGAELIIQEINREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEK 60
+ G + I +I +A+ + I++EA E KI E+AK AE + IL++ + +AE+ K
Sbjct: 3 LMGVDKIKSKILDDAKAEANKIISEAEAEKAKILEKAKEEAEKRKAEILKKGEKEAEMTK 62
Query: 61 QRIIANARLEVRRKRLAVQEEIIRNVLDEVRKRLQEMPEE-EYFESIKALLKEAVEELKE 119
RII+ A+LE ++K L +EEII ++++++ L ++PE+ EY + + L+K+ L
Sbjct: 63 SRIISEAKLEAKKKLLEAKEEIIEMAINKLKEELVKLPEQPEYKDKLIKLIKDGAISLGG 122
Query: 120 GKVRVYSNERTLALISSRI-----EEIRDYLGSISI-EIGSAISTMGGVIVETEDGRIRI 173
G++ V N+R + LI +E+ + +++ + G + GG I+ET DG +
Sbjct: 123 GELIVRLNKRDMELIDDSTLWNLEKEVENATKKVTVLKKGEPVDIAGGCIIETADGLKSL 182
Query: 174 DNTFEARMERFEGEIRAKIAKVLF 197
DN+ EA R IRA+I + LF
Sbjct: 183 DNSLEAIFNRNLNVIRARITEKLF 206
>gi|11498763 H+-transporting ATP synthase, subunit E (atpE) [Archaeoglobus
fulgidus] >gi|7436311|pir||B69395 H+-transporting ATP
synthase, subunit E (atpE) homolog - Archaeoglobus
fulgidus >gi|2649420|gb|AAB90079.1| (AE001023)
H+-transporting ATP synthase, subunit E (atpE)
[Archaeoglobus fulgidus]
Length = 188
Score = 94.8 bits (232), Expect = 6e-19
Identities = 60/195 (30%), Positives = 113/195 (57%), Gaps = 17/195 (8%)
Query: 7 IIQEINREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEKQRI--- 63
++QEI ++ E ++ I E +E EKI EAK AE IL++A+ +AE E + I
Sbjct: 6 VLQEIQQKGEEEVRRIREETEKEVEKILAEAKAEAEE----ILKKAREEAEKEAEAIRRQ 61
Query: 64 -IANARLEVRRKRLAVQEEIIRNVLDEVRKRLQEMPEEEYFESIKALLKEAVEELKEGKV 122
I++ +LE++R+ L VQ+EI+ V + +R+++++M E E+ K +LK +E+ +
Sbjct: 62 EISSVKLEMKRELLNVQKEILEEVFNLLRQKVRDMDE----ETRKKILKNLLEKNASPGM 117
Query: 123 RVYSNERTLALISSRIEEIRDYLGSISIEIGSAISTMGGVIVETEDGRIRIDNTFEARME 182
VYS + ++ I+E++ + + G I +GGVI+E G IR++ TF+ +
Sbjct: 118 VVYSRKEDEDIVKELIKELK-----LDVTYGGNIDCIGGVILEDPAGDIRLNLTFDELVS 172
Query: 183 RFEGEIRAKIAKVLF 197
+ + ++++K+LF
Sbjct: 173 QVYEQKLSEVSKLLF 187
>sp|Q48329|ATPE_HALVO ATP SYNTHASE, SUBUNIT E >gi|11267058|pir||T47200 H+-transporting
ATP synthase (EC 3.6.1.34) chain D [validated] -
Haloferax volcanii >gi|693939|emb|CAA56048.1| (X79516)
membrane ATPase [Haloferax volcanii]
>gi|1098054|prf||2115218A ATPase [Haloferax volcanii]
Length = 194
Score = 86.6 bits (211), Expect = 2e-16
Identities = 49/177 (27%), Positives = 99/177 (55%), Gaps = 7/177 (3%)
Query: 7 IIQEINREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEKQRIIAN 66
++++I EA + E I + +E+A++I EA+ AE E + Q E E+++ +++
Sbjct: 6 VVEDIRDEARARAEDIRQDGQEQADEIVAEAEADAEELLESRKADVEQQLEREREQALSS 65
Query: 67 ARLEVRRKRLAVQEEIIRNVLDEVRKRLQEMPEEEYFESIKALLKEAVEELKEG-KVRVY 125
A+LE ++ RL+ + ++++ V ++V + L E+ + E ++LL A E ++ +V VY
Sbjct: 66 AKLEAKQARLSARRDVLQRVREQVERELAELEGDRREELTRSLLXAAAVEFEDADEVSVY 125
Query: 126 SNERTLALISSRIEEIRDYLGSISIEIGSAISTMGGVIVETEDGRIRIDNTFEARME 182
L+SS +E+ Y E +GGV+VE + R+R++NTF++ ++
Sbjct: 126 GRADDEELLSSILEDYDGY------EFAGERDCLGGVVVEGSNSRVRVNNTFDSVLD 176
>sp|P31402|VATE_MANSE VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E SUBUNIT) (V-ATPASE 28
KD SUBUNIT) >gi|9733|emb|CAA47610.1| (X67131)
H(+)-transporting ATPase [Manduca sexta]
Length = 226
Score = 82.3 bits (200), Expect = 3e-15
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 11 INREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEKQRIIANARLE 70
I +EA K E I +A EE K ++ K + + Q EL+K+ +N +
Sbjct: 19 IEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQKKIQSSNMLNQ 78
Query: 71 VRRKRLAVQEEIIRNVLDEVRKRLQEMPEE--EYFESIKALLKEAVEELKEGKVRVYSNE 128
R K L V+E+ +RNVLDE RKRL E+P++ Y + + L+ +A+ +L E V + +
Sbjct: 79 ARLKVLKVREDHVRNVLDEARKRLAEVPKDIKLYSDLLVTLIVQALFQLVEPTVTLRVRQ 138
Query: 129 RTLALISSRIEEI-RDYLGSISIEIGSAI--------STMGGVIVETEDGRIRIDNTFEA 179
AL+ S + +DY I ++ I T GG+ + GRI+I NT E+
Sbjct: 139 ADKALVESLLGRAQQDYKAKIKKDVVLKIDNENFLPPDTCGGIELIAAKGRIKISNTLES 198
Query: 180 RMERFEGEIRAKIAKVLFG 198
R+E ++ +I LFG
Sbjct: 199 RLELIAQQLLPEIRNALFG 217
>pir||S25014 H+-transporting ATPase (EC 3.6.1.35) 28K chain - tobacco hornworm
Length = 222
Score = 82.3 bits (200), Expect = 3e-15
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 11 INREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEKQRIIANARLE 70
I +EA K E I +A EE K ++ K + + Q EL+K+ +N +
Sbjct: 15 IEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQKKIQSSNMLNQ 74
Query: 71 VRRKRLAVQEEIIRNVLDEVRKRLQEMPEE--EYFESIKALLKEAVEELKEGKVRVYSNE 128
R K L V+E+ +RNVLDE RKRL E+P++ Y + + L+ +A+ +L E V + +
Sbjct: 75 ARLKVLKVREDHVRNVLDEARKRLAEVPKDIKLYSDLLVTLIVQALFQLVEPTVTLRVRQ 134
Query: 129 RTLALISSRIEEI-RDYLGSISIEIGSAI--------STMGGVIVETEDGRIRIDNTFEA 179
AL+ S + +DY I ++ I T GG+ + GRI+I NT E+
Sbjct: 135 ADKALVESLLGRAQQDYKAKIKKDVVLKIDNENFLPPDTCGGIELIAAKGRIKISNTLES 194
Query: 180 RMERFEGEIRAKIAKVLFG 198
R+E ++ +I LFG
Sbjct: 195 RLELIAQQLLPEIRNALFG 213
>sp|O13687|VATE_SCHPO PROBABLE VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E SUBUNIT)
(V-ATPASE 26 KD SUBUNIT) >gi|7493598|pir||T37535
vacuolar atp synthase subunit - fission yeast
(Schizosaccharomyces pombe) >gi|2330665|emb|CAB11186.1|
(Z98595) vacuolar atp synthase subunit
[Schizosaccharomyces pombe]
Length = 227
Score = 73.4 bits (177), Expect = 2e-12
Identities = 56/217 (25%), Positives = 109/217 (49%), Gaps = 31/217 (14%)
Query: 9 QEINREAERKIEYILNEAREEAEKIKEEAKRRAE-SKAEWI--------------LRRAK 53
+++ E + + +I EA E+A++I ++ + KA+ + L+RA
Sbjct: 6 EQVQAEMHKMVSFIKQEALEKAKEIHTLSEEEFQVEKAKIVREQCDAIDQTYDMKLKRAS 65
Query: 54 TQAELEKQRIIANARLEVRRKRLAVQEEIIRNVLDEVRKRLQ--EMPEEEYFESIKALLK 111
++ K ++ +RLE+ L ++++I ++ V K+L E ++ Y + + L+
Sbjct: 66 MAQKIAKSNVLNKSRLEI----LNSKQKVIDDIFSRVEKKLDGIEQKKDAYTKFMADLIV 121
Query: 112 EAVEELKEGKVRVYSNERTLALISSRIEEIRDYL----GSISIEIGSAI------STMGG 161
+A+E L E VYS +R ++ + I + + L GSI E+ + S +GG
Sbjct: 122 QAMELLGEPVGIVYSRQRDAEIVKAAIPKATEVLKSKNGSIDYELDAETDDFLNDSVLGG 181
Query: 162 VIVETEDGRIRIDNTFEARMERFEGEIRAKIAKVLFG 198
V++ G+IR+DNT AR+E + E +I ++LFG
Sbjct: 182 VVLVGLGGKIRVDNTLRARLEIVKEEALPEIRRLLFG 218
>gb|AAG20280.1| (AE005102) H+-transporting ATP synthase subunit E; AtpE
[Halobacterium sp. NRC-1]
Length = 195
Score = 73.4 bits (177), Expect = 2e-12
Identities = 50/193 (25%), Positives = 99/193 (50%), Gaps = 8/193 (4%)
Query: 5 ELIIQEINREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEKQRII 64
E ++++I EA + + I +A E A++I EA+ A+ + + E+++ +
Sbjct: 4 ETVVEDIRDEARERAKEIRADADERADEIVAEAEADADDIIADAEAEVTAEIDQEREQQL 63
Query: 65 ANARLEVRRKRLAVQEEIIRNVLDEVRKRLQEMPEEEYFESIKALLKEAVEELKEGK-VR 123
++A LE ++ RL + + +++V V R+ + +E E + LL A E VR
Sbjct: 64 SSAELEAKQMRLEARRDALQSVRSAVEDRIVALDGDEREELTRELLDAASTEFDGADTVR 123
Query: 124 VYSNERTLALISSRIEEIRDYLGSISIEIGSAISTMGGVIVETEDGRIRIDNTFEARM-E 182
V+ ALIS +++ Y E +GGV+VE++ RIR++NTF++ + +
Sbjct: 124 VFGRADDEALISEILDDYDGY------EYAGEYDCLGGVVVESDASRIRVNNTFDSILAD 177
Query: 183 RFEGEIRAKIAKV 195
+E ++A A++
Sbjct: 178 AWENNLKAISARL 190
>emb|CAB62552.1| (AJ249961) vacuolar ATPase subunit E [Heterodera schachtii]
Length = 226
Score = 69.9 bits (168), Expect = 2e-11
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 11/199 (5%)
Query: 11 INREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEKQRIIANARLE 70
I +EA K E I +A EE K + + K + + Q EL+++ +N + +
Sbjct: 19 IEQEANEKAEEIDAKAEEEFNIEKGKLVQLQRQKIMEYYEKKEKQVELQRKIQRSNMQNQ 78
Query: 71 VRRKRLAVQEEIIRNVLDEVRKRLQEM--PEEEYFESIKALLKEAVEELKEGKV----RV 124
R K L +++ ++NVL+E R L ++ E Y +K LL + + +L E KV R
Sbjct: 79 SRLKCLKARDDHLKNVLEEARANLSKISADRERYPAILKGLLLQGLFQLLESKVVLRCRK 138
Query: 125 YSNERTLALISSRIEEIRDYLGS-----ISIEIGSAISTMGGVIVETEDGRIRIDNTFEA 179
E ++ +EE++ G+ I E + + GGV + +DG+IR+ +T EA
Sbjct: 139 KDEEMVARILPECLEEVQRTWGNRSEVKIDNEHFLSPESAGGVELLAKDGKIRVSSTLEA 198
Query: 180 RMERFEGEIRAKIAKVLFG 198
R++ +I ++ LFG
Sbjct: 199 RLDLIADKITPQVRTALFG 217
>sp|P54611|VATE_DROME VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E SUBUNIT) (V-ATPASE 28
KDA SUBUNIT) >gi|1033188|gb|AAB09738.1| (U38198)
V-ATPase subunit E [Drosophila melanogaster]
>gi|1055352|gb|AAB09739.1| (U38951) vacuolar ATPase
subunit E [Drosophila melanogaster]
>gi|5052526|gb|AAD38593.1|AF145618_1 (AF145618)
BcDNA.GH03683 [Drosophila melanogaster]
>gi|7296718|gb|AAF51997.1| (AE003602) Vha26 gene product
[alt 1] [Drosophila melanogaster]
>gi|7296719|gb|AAF51998.1| (AE003602) Vha26 gene product
[alt 2] [Drosophila melanogaster]
Length = 226
Score = 69.1 bits (166), Expect = 3e-11
Identities = 55/199 (27%), Positives = 96/199 (47%), Gaps = 11/199 (5%)
Query: 11 INREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEKQRIIANARLE 70
I +EA K E I +A EE K ++ K + + Q EL+K+ +N +
Sbjct: 19 IEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQKKIQSSNMLNQ 78
Query: 71 VRRKRLAVQEEIIRNVLDEVRKRLQEMP--EEEYFESIKALLKEAVEELKEGKVRVYSNE 128
R K L V+E+ + +VLD+ RKRL E+ + EY + L+ + + ++ E KV + E
Sbjct: 79 ARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIMEPKVILRCRE 138
Query: 129 RTLALISSRI-EEIRDYLGSISIEIGSAI--------STMGGVIVETEDGRIRIDNTFEA 179
+ L+ + + + Y I+ + I T GGV + +GRI++ NT E+
Sbjct: 139 VDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVELLALNGRIKVPNTLES 198
Query: 180 RMERFEGEIRAKIAKVLFG 198
R++ ++ +I LFG
Sbjct: 199 RLDLISQQLVPEIRNALFG 217
>sp|Q60183|ATPE_METMA ATP SYNTHASE, SUBUNIT E >gi|11267061|pir||T45104 H+-transporting
ATP synthase (EC 3.6.1.34) chain E [imported] -
Methanosarcina mazei >gi|1199635|gb|AAC06372.1| (U47274)
A1AO H+ ATPase, subunit E [Methanosarcina mazei]
Length = 183
Score = 69.1 bits (166), Expect = 3e-11
Identities = 48/196 (24%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 3 GAELIIQEINREAERKIEYILNEAREEAEKIKEEAKRRAESKAEWILRRAKTQAELEKQR 62
G E+++++I A ++ I E +A +I EAK + L +A+ + Q+
Sbjct: 2 GHEIVVKDIQEGARAEVSRIKAEGDAKASEIINEAKEIQKKTLGDSLAKAEEDLQSLHQQ 61
Query: 63 IIANARLEVRRKRLAVQEEIIRNVLDEVRKRLQEMPEEEYFESIKALLKEAVEELKEGKV 122
+I++A LEV+R L ++E++ V ++ + ++ M + E LLK +++ +
Sbjct: 62 VISSANLEVKRITLNKRKELLDTVYNQTVENIKSMSASKKEE----LLKSILDKHEASGA 117
Query: 123 RVYSNERTLALISSRIEEIRDYLGSISIEIGSAISTMGGVIVETEDGRIRIDNTFEARME 182
R YS++ + EE+ L S+S I ++GG+++E ED +R+D T+++ ++
Sbjct: 118 RAYSSKES--------EELVKKLTSLS--YAGNIDSIGGIVLENEDRTVRLDFTYDSILK 167
Query: 183 RFEGEIRAKIAKVLFG 198
+I+ +L+G
Sbjct: 168 SVYERSLKQISDILYG 183
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.314 0.133 0.336
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59304720
Number of Sequences: 2977
Number of extensions: 2248562
Number of successful extensions: 27086
Number of sequences better than 1.0e-10: 14
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 27034
Number of HSP's gapped (non-prelim): 20
length of query: 199
length of database: 189,106,746
effective HSP length: 64
effective length of query: 135
effective length of database: 150,803,578
effective search space: 20358483030
effective search space used: 20358483030
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (22.0 bits)
S2: 162 (67.5 bits)