BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1186 (atpB) DE:H+-transporting ATP synthase, subunit B
(atpB)
(465 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75028 h+-transporting ATP synthase, chain B (atpb) PAB1186... 926 0.0
pir||F71213 probable H(+)-transporting ATP synthase subunit B - ... 919 0.0
pir||T44675 H+-transporting ATP synthase, chain B [imported] - D... 880 0.0
pir||T44310 H+-transporting ATP synthase (EC 3.6.1.34) beta chai... 873 0.0
pir||F69227 ATP synthase, subunit B - Methanobacterium thermoaut... 728 0.0
sp|Q57669|ATPB_METJA ATP SYNTHASE BETA CHAIN >gi|2118192|pir||A6... 726 0.0
gi|11498767 H+-transporting ATP synthase, subunit B (atpB) [Arch... 698 0.0
pir||D72733 probable membrane-associated ATPase beta chain APE04... 673 0.0
emb|CAC11154.1| (AL445063) probable ATP synthase (subunit B) [Th... 644 0.0
sp|Q48333|ATPB_HALVO ATP SYNTHASE BETA CHAIN >gi|629403|pir||S45... 640 0.0
sp|P22663|ATPB_METBA ATP SYNTHASE BETA CHAIN >gi|80985|pir||B342... 638 0.0
sp|Q08637|NTPB_ENTHR V-TYPE SODIUM ATP SYNTHASE SUBUNIT B (NA(+)... 626 e-178
gb|AAG20276.1| (AE005102) H+-transporting ATP synthase subunit B... 621 e-177
sp|P25164|ATPB_HALSA ATP SYNTHASE BETA CHAIN >gi|81071|pir||S147... 620 e-176
emb|CAB57735.1| (Y18930) atpase-beta chain (membrane-associated)... 618 e-176
gb|AAK40880.1| ATP synthase subunit B (atpB) [Sulfolobus solfata... 618 e-176
pir||B56812 H+-transporting ATP synthase (EC 3.6.1.34) beta chai... 617 e-175
sp|P13052|ATPB_SULAC MEMBRANE-ASSOCIATED ATPASE BETA CHAIN (SUL-... 614 e-175
sp|Q60187|ATPB_METMA ATP SYNTHASE BETA CHAIN (ATPASE SUBUNIT B) ... 614 e-175
sp|Q40079|VAT2_HORVU VACUOLAR ATP SYNTHASE SUBUNIT B ISOFORM 2 (... 585 e-166
gi|6319603 vacuolar ATPase V1 domain subunit B (60 kDa); Vma2p [... 585 e-166
gb|AAA30391.1| (M83131) H+-ATPase B subunit [Bos taurus] 584 e-166
gi|4502311 ATPase, H+ transporting, lysosomal (vacuolar proton p... 584 e-166
gb|AAA66890.1| (J04450) vacuolar H+-ATPase 52 kDa subunit [Sacch... 584 e-165
sp|P31408|VAB2_BOVIN VACUOLAR ATP SYNTHASE SUBUNIT B, BRAIN ISOF... 584 e-165
pir||JC4198 adenosinetriphosphatase (EC 3.6.1.3) B chain - chicken 582 e-165
gb|AAD55091.1|AF179250_1 (AF179250) vacuolar-type H+ transportin... 582 e-165
pir||T05679 H+-transporting ATP synthase (EC 3.6.1.34) 54K chain... 582 e-165
gb|AAF73735.1|U61724_1 (U61724) vacuolar H-ATPase B subunit oste... 582 e-165
emb|CAA73182.1| (Y12634) vacuolar adenosine triphosphatase subun... 582 e-165
gb|AAA58661.1| (L35249) vacuolar H+-ATPase 56,000 subunit [Homo ... 582 e-165
sp|Q43432|VAT1_GOSHI VACUOLAR ATP SYNTHASE SUBUNIT B ISOFORM 1 (... 582 e-165
sp|Q40078|VAT1_HORVU VACUOLAR ATP SYNTHASE SUBUNIT B ISOFORM 1 (... 581 e-165
gb|AAA30400.1| (M88690) vacuolar H+-ATPase [Bos taurus] 581 e-165
sp|Q19626|VATB_CAEEL PROBABLE VACUOLAR ATP SYNTHASE SUBUNIT B (V... 581 e-165
pir||T43789 H+-transporting ATP synthase (EC 3.6.1.34) chain B, ... 580 e-165
sp|P22550|VATB_CANTR VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE 5... 580 e-164
gb|AAD33861.1| (AF140022) V-type ATPase B subunit [Oncorhynchus ... 580 e-164
gb|AAC78641.1| (AF099743) vacuolar-type H+ transporting ATPase B... 580 e-164
sp|P11574|VATB_ARATH VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B... 579 e-164
dbj|BAA36692.1| (AB016484) vacuolar-type H+-ATPase subunit B [As... 578 e-164
sp|P48413|VATB_CYACA VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B... 576 e-163
sp|Q38681|VAB1_ACEAT VACUOLAR ATP SYNTHASE SUBUNIT B ISOFORM 1 (... 575 e-163
gb|AAF60418.1| (AC006708) contains similarity to Pfam families P... 575 e-163
sp|P31401|VATB_MANSE VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B... 574 e-163
sp|P11593|VATB_NEUCR VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE 5... 574 e-163
gb|AAC04806.1| (AF037468) B subunit V-ATPase [Culex pipiens quin... 574 e-163
gb|AAD27666.1|AF092934_1 (AF092934) vacuolar ATPase B subunit [A... 574 e-163
pir||S25335 H+-transporting ATPase (EC 3.6.1.35) chain B, vacuol... 573 e-162
sp|P31410|VATB_HELVI VACUOLAR ATP SYNTHASE SUBUNIT B >gi|102930|... 573 e-162
sp|P31411|VATB_SCHPO VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE 5... 572 e-162
pir||B75488 v-type ATP synthase, B subunit - Deinococcus radiodu... 571 e-162
sp|P31409|VATB_DROME VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE 5... 571 e-162
gb|AAF08281.1|AF189779_1 (AF189779) vacuolar ATP synthase subuni... 568 e-161
sp|Q38680|VAB2_ACEAT VACUOLAR ATP SYNTHASE SUBUNIT B ISOFORM 2 (... 567 e-161
gb|AAF26445.1| (AF220611) vacuolar H+-ATPase B subunit [Nicotian... 566 e-160
gi|6680754 ATPase, H+ transporting, lysosomal (vacuolar proton p... 564 e-160
sp|Q25691|VATB_PLAFA VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B... 562 e-159
gb|AAF26763.1|AC007396_12 (AC007396) T4O12.24 [Arabidopsis thali... 562 e-159
gi|11430919 ATPase, H+ transporting, lysosomal (vacuolar proton ... 559 e-158
sp|P15313|VAB1_HUMAN VACUOLAR ATP SYNTHASE SUBUNIT B, KIDNEY ISO... 556 e-157
gi|4502309 ATPase, H+ transporting, lysosomal (vacuolar proton p... 556 e-157
sp|P31407|VAB1_BOVIN VACUOLAR ATP SYNTHASE SUBUNIT B, KIDNEY ISO... 554 e-157
pir||B71313 probable V-type ATPase, subunit B (atpB-2) - syphili... 554 e-156
dbj|BAA97567.1| (AB023581) vacuolar ATPase B subunit [Blastocyst... 549 e-155
gb|AAF88162.1|AC026234_13 (AC026234) Nearly identical to vacuola... 534 e-151
sp|Q26976|VATB_TRYCO VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B... 534 e-151
pir||A39212 H+-transporting ATPase (EC 3.6.1.35), vacuolar - hum... 531 e-150
sp|P49712|VATB_CHICK VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B... 527 e-148
gb|AAD11943.1| (AF107478) H+-ATPase beta 1 subunit [Homo sapiens] 522 e-147
pir||B42254 H+-transporting ATPase (EC 3.6.1.35) chain B isoform... 509 e-143
sp|Q43433|VAT2_GOSHI VACUOLAR ATP SYNTHASE SUBUNIT B ISOFORM 2 (... 495 e-139
dbj|BAA89597.1| (AB036925) vacuolar H+-ATPase B subunit [Citrus ... 450 e-125
gb|AAF91293.1|AF236667_1 (AF236667) vacuolar ATP synthase subuni... 450 e-125
sp|P20022|ATPB_METTL ATP SYNTHASE BETA CHAIN >gi|80952|pir||S050... 405 e-112
gb|AAB04559.1| (U63317) vacuolar H+ ATPase B subunit [Dictyostel... 356 4e-97
pir||H71325 probable V-type ATPase, subunit B (atpB-1) - syphili... 291 9e-78
pir||A71531 probable ATP synthase chain B - Chlamydia trachomati... 289 4e-77
pir||D81687 ATP synthase, chain B TC0581 [imported] - Chlamydia ... 288 7e-77
pir||C72121 ATP synthase, chain B CP0685 [imported] - Chlamydoph... 282 4e-75
pir||E70111 V-type ATPase, subunit B (atpB) homolog - Lyme disea... 280 2e-74
gb|AAB36110.1| vacuolar H(+)-ATPase subunit B [Mesembryanthemum ... 224 2e-57
pir||D72404 flagellum-specific ATP synthase - Thermotoga maritim... 204 2e-51
emb|CAC15466.1| (AJ250811) V-ATPase B subunit [Salmo salar] 203 3e-51
gb|AAF08284.1|AF189782_1 (AF189782) vacuolar ATP synthase subuni... 195 8e-49
gb|AAF08285.1|AF189783_1 (AF189783) vacuolar ATP synthase subuni... 195 8e-49
gb|AAD13785.1| (AF118828) vacuolar H+-ATPase [Ilyanassa obsoleta] 190 3e-47
gb|AAF08282.1|AF189780_1 (AF189780) vacuolar ATP synthase subuni... 189 6e-47
gb|AAF08283.1|AF189781_1 (AF189781) vacuolar ATP synthase subuni... 187 2e-46
sp|O50341|ATPB_FERIS ATP SYNTHASE BETA CHAIN >gi|2687832|emb|CAA... 169 7e-41
sp|P80153|HRB6_XANCV PROBABLE ATP SYNTHASE HRPB6 >gi|398113|gb|A... 164 1e-39
sp|P49376|ATPB_KLULA ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PREC... 164 1e-39
sp|P35110|ATPB_CHLLI ATP SYNTHASE BETA CHAIN >gi|421345|pir||S30... 164 2e-39
pir||T10475 H+-transporting ATP synthase (EC 3.6.1.34) beta chai... 164 2e-39
sp|P42467|ATPB_PEPNI ATP SYNTHASE BETA CHAIN 164 2e-39
pir||B82114 flagellum-specific ATP synthase FliI VC2130 [importe... 163 4e-39
sp|P42465|ATPB_CHLVI ATP SYNTHASE BETA CHAIN >gi|560823|emb|CAA5... 162 7e-39
sp|P00830|ATPB_YEAST ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PREC... 162 1e-38
gi|6322581 F(1)F(0)-ATPase complex beta subunit, mitochondrial; ... 161 1e-38
emb|CAA69911.1| (Y08620) F0/F1-ATPase [Helicobacter pylori] 161 1e-38
sp|O50550|ATPB_THEMA ATP SYNTHASE BETA CHAIN >gi|7436083|pir||D7... 161 1e-38
gb|AAF61281.1| (AF026197) HrpB6 [Xanthomonas oryzae pv. oryzae] ... 161 1e-38
sp|O07025|FLII_HELPY FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436102... 161 2e-38
sp|Q9ZJJ3|FLII_HELPJ FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436101... 159 6e-38
sp|P42470|ATPB_WOLSU ATP SYNTHASE BETA CHAIN >gi|587588|emb|CAA5... 159 8e-38
gb|AAB93498.1| (U75584) ATPase [Helicobacter pylori] 159 8e-38
gb|AAD15915.1| (AF069392) polar flagellum-specific ATP synthase ... 158 1e-37
sp|P22068|ATPB_SCHPO ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PREC... 157 2e-37
pir||A83509 flagellum-specific ATP synthase FliI PA1104 [importe... 157 2e-37
pir||S61858 hrpE protein - Pseudomonas solanacearum >gi|6066711|... 156 4e-37
gi|10955560 ATPase YscN [Yersinia enterocolitica] >gi|732261|sp|... 155 7e-37
gi|10955631 Yops secretion ATPase YscN homolog [Yersinia pestis]... 155 7e-37
sp|P40291|YSCN_YERPS PROBABLE ATP SYNTHASE YSCN (YOPS SECRETION ... 153 4e-36
dbj|BAB06174.1| (AP001515) flagellar-specific ATP synthase [Baci... 153 4e-36
sp|P50002|ATPB_ACEWO ATP SYNTHASE BETA CHAIN, SODIUM ION SPECIFI... 153 5e-36
sp|P55717|Y4YI_RHISN PROBABLE ATP SYNTHASE Y4YI >gi|2182734|gb|A... 152 6e-36
sp|Q9ZK81|ATPB_HELPJ ATP SYNTHASE BETA CHAIN >gi|7436085|pir||D7... 152 6e-36
gb|AAB61298.1| (AF004014) F1F0-ATPase beta subunit [Helicobacter... 152 8e-36
pir||C81427 H+-transporting ATP synthase (EC 3.6.1.34) F1 sector... 152 8e-36
sp|P25075|ATPX_BACFI ATP SYNTHASE BETA CHAIN >gi|67850|pir||PWBS... 151 1e-35
sp|Q50331|ATPB_MYCPN ATP SYNTHASE BETA CHAIN >gi|2127619|pir||S6... 151 1e-35
emb|CAA75478.1| (Y15179) F1-ATP synthase, beta subunit [Sorghum ... 151 1e-35
gi|11467561 ATP synthase CF1 subunit beta [Odontella sinensis] >... 151 2e-35
gb|AAB52239.1| (U85783) nucleotide binding protein FliI [Legione... 151 2e-35
dbj|BAA23688.1| (AB006151) proton-translocating ATPase, beta sub... 151 2e-35
sp|P55988|ATPB_HELPY ATP SYNTHASE BETA CHAIN >gi|7436090|pir||D6... 150 3e-35
pir||C72046 type III secretion cytoplasmic ATPase SctN CP0039 [i... 149 5e-35
sp|O83417|FLII_TREPA FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436100... 148 9e-35
pir||A71486 probable yop N (flagellar-type ATPase) - Chlamydia t... 148 1e-34
pir||D81749 type III secretion cytoplasmic ATPase SctN TC0040 [i... 148 1e-34
gb|AAA22253.1| (M31107) ATP synthase beta subunit (atpD) (EC 3.6... 148 2e-34
sp|P52607|FLII_BORBU FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436104... 147 2e-34
sp|P00824|ATPB_ECOLI ATP SYNTHASE BETA CHAIN >gi|67830|pir||PWEC... 147 3e-34
gb|AAF19362.1|AF188265_8 (AF188265) ATP synthase subunit beta [S... 146 4e-34
gi|11466372 CF1 beta subunit of ATP synthase [Mesostigma viride]... 146 6e-34
gi|7524779 ATP synthase CF1 alpha chain [Chlorella vulgaris] >gi... 145 8e-34
sp|P00828|ATPB_HORVU ATP SYNTHASE BETA CHAIN >gi|67835|pir||PWBH... 145 1e-33
emb|CAB90022.1| (AJ235406) ATP synthase beta subunit [Barbacenia... 145 1e-33
emb|CAB65431.1| (AJ236214) ATP synthase beta subunit [Sollya het... 144 2e-33
emb|CAB89995.1| (AJ235610) ATP synthase beta subunit [Stackhousi... 144 2e-33
gb|AAF98993.1| (AF274683) ATP synthase beta subunit [Paeonia cal... 144 2e-33
emb|CAB44011.1| (AJ233094) H(+)-transporting ATP synthase [Dais ... 144 2e-33
gb|AAF01643.1| (AF093389) ATP synthase beta subunit [Paeonia suf... 144 2e-33
gb|AAD50892.1| (AF168950) ATP synthase beta subunit [Tradescanti... 143 3e-33
pir||JC5741 membrane-bound proton-translocating ATPase (EC 3.6.1... 143 3e-33
emb|CAB89961.2| (AJ235552) ATP synthase beta subunit [Parnassia ... 143 3e-33
emb|CAB89730.1| (AJ235646) ATP synthase beta subunit [Xanthophyl... 143 4e-33
emb|CAA67541.1| (X99079) subunit beta of ATPase [Ochrosphaera ne... 143 5e-33
gi|11467680 ATP synthase CF1 subunit a [Guillardia theta] >gi|59... 143 5e-33
sp|Q01396|ATPB_AEGCO ATP SYNTHASE BETA CHAIN >gi|343981|dbj|BAA0... 142 7e-33
gb|AAB17681.1| (L12251) putative ATPase [Sinorhizobium fredii] 142 7e-33
gb|AAD50838.1| (AF168896) ATP synthase beta subunit [Colocasia e... 142 7e-33
emb|CAB89742.1| (AJ235631) ATP synthase beta subunit [Trigonobal... 142 7e-33
sp|P20858|ATPB_WHEAT ATP SYNTHASE BETA CHAIN >gi|67834|pir||PWWT... 142 9e-33
gi|7524659 H+-ATPase beta subunit [Pinus thunbergii] >gi|1168580... 142 9e-33
gb|AAD50893.1| (AF168951) ATP synthase beta subunit [Typha latif... 142 9e-33
sp|O50288|ATPA_RICPR ATP SYNTHASE ALPHA CHAIN >gi|7436072|pir||E... 141 1e-32
prf||1711264A CF1 ATPase:SUBUNIT=beta [Sorghum sp.] 141 2e-32
sp|P42469|ATPB_STIAU ATP SYNTHASE BETA CHAIN >gi|587526|emb|CAA5... 141 2e-32
gi|11466794 atpB; ATPase beta subunit [Oryza sativa] >gi|114559|... 140 3e-32
sp|Q08807|ATPB_CYACA ATP SYNTHASE BETA CHAIN >gi|480090|pir||S36... 140 3e-32
gi|11467199 ATPase beta subunit [Zea mays] >gi|114551|sp|P00827|... 140 4e-32
gi|7524904 ATP synthase CF1 beta chain [Chlorella vulgaris] >gi|... 140 4e-32
gb|AAB88551.1| (AF036246) putative F1-ATP synthase alpha subunit... 140 4e-32
gb|AAD00918.1| (AF001955) proton-translocating ATPase beta subun... 139 5e-32
sp|P23445|FLII_BACSU FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|67851|p... 139 6e-32
gb|AAA84588.1| (M31464) atpB gene product [Oryza sativa] 139 6e-32
gi|11466784 ATPase alpha subunit [Oryza sativa] >gi|114521|sp|P1... 139 8e-32
gi|11466709 atpB [Marchantia polymorpha] >gi|114552|sp|P06284|AT... 138 1e-31
pir||B81438 H+-transporting ATP synthase (EC 3.6.1.34) flagellum... 138 1e-31
gi|11467760 CF1 beta subunit of ATP synthase [Nephroselmis oliva... 138 1e-31
sp|O47037|ATPB_PICAB ATP SYNTHASE BETA CHAIN >gi|7436111|pir||T1... 138 2e-31
sp|P55987|ATPA_HELPY ATP SYNTHASE ALPHA CHAIN >gi|7436075|pir||F... 137 3e-31
sp|P08215|ATPA_PEA ATP SYNTHASE ALPHA CHAIN >gi|67826|pir||PWPMA... 136 4e-31
sp|Q31794|ATPB_ANTFO ATP SYNTHASE BETA CHAIN >gi|2760294|dbj|BAA... 136 4e-31
sp|P45825|ATPA_MYCLE ATP SYNTHASE ALPHA CHAIN >gi|7436108|pir||T... 136 5e-31
dbj|BAA28167.1| (AB012085) Cl--pumping ATPase a subunit [Acetabu... 136 7e-31
dbj|BAA90397.1| (AB037543) ATP synthase beta subunit [Oryza sativa] 136 7e-31
gb|AAC38383.1| (AF022236) EscN [Escherichia coli] 135 9e-31
pir||A81427 H+-transporting ATP synthase (EC 3.6.1.34) F1 sector... 135 9e-31
gi|11467189 ATPase alpha subunit [Zea mays] >gi|114518|sp|P05022... 135 1e-30
sp|Q02848|ATPA_ANTSP ATP SYNTHASE ALPHA CHAIN >gi|485445|pir||S2... 135 1e-30
sp|P13357|ATPB_CYTLY ATP SYNTHASE BETA CHAIN >gi|477688|pir||B46... 135 1e-30
gb|AAC31513.1| (AF071034) L0034 [Escherichia coli] 135 1e-30
gi|11467516 ATP synthase CF1 subunit alpha [Odontella sinensis] ... 133 3e-30
gb|AAF01629.1| (AF093375) ATP synthase beta subunit [Glaucidium ... 133 3e-30
gb|AAG33879.1| (AF232004) HrcN [Pseudomonas syringae pv. tomato] 133 3e-30
emb|CAB67128.1| (AJ271079) ATP synthase beta subunit [Oenothera ... 133 5e-30
sp|Q07405|ATPA_MYXXA ATP SYNTHASE ALPHA CHAIN (59 KD MEMBRANE-AS... 132 6e-30
gb|AAA81942.1| (U07346) HrpJ4 [Pseudomonas syringae] 131 1e-29
pir||S23359 H+-transporting ATP synthase (EC 3.6.1.34) alpha cha... 131 2e-29
pir||D71480 probable flagellum-specific ATP synthase - Chlamydia... 131 2e-29
sp|P52612|FLII_ECOLI FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436098... 130 3e-29
gb|AAB51464.1| (U64318) ATP synthase subunit alpha [Moorella the... 130 3e-29
sp|P41167|ATPA_THIFE ATP SYNTHASE ALPHA CHAIN >gi|154672|gb|AAA5... 130 4e-29
pir||A82716 ATP synthase, alpha chain XF1145 [imported] - Xylell... 129 9e-29
sp|P05036|ATPA_RHORU ATP SYNTHASE ALPHA CHAIN >gi|67815|pir||PWQ... 128 2e-28
sp|P17674|ATPA_BACME ATP SYNTHASE ALPHA CHAIN >gi|98135|pir||F31... 127 3e-28
sp|O66907|ATPA_AQUAE ATP SYNTHASE ALPHA CHAIN >gi|7436078|pir||G... 127 3e-28
gb|AAA82637.1| (L49147) ATPase [Escherichia coli] 126 4e-28
dbj|BAB07475.1| (AP001519) ATP synthase alpha subunit [Bacillus ... 126 4e-28
pir||S62702 H+-transporting ATP synthase (EC 3.6.1.34) alpha cha... 126 6e-28
sp|Q10592|ATPA_MYCTU ATP SYNTHASE ALPHA CHAIN >gi|7436079|pir||H... 126 6e-28
sp|P26526|ATPA_CHLRE ATP SYNTHASE ALPHA CHAIN 125 1e-27
gi|11466531 ATP synthase F1 subunit alpha [Reclinomonas american... 124 2e-27
pir||E82952 ATP synthase alpha chain PA5556 [imported] - Pseudom... 124 2e-27
sp|P13356|ATPB_BACFR ATP SYNTHASE BETA CHAIN >gi|476889|pir||A46... 123 5e-27
pir||S39254 H+-transporting ATP synthase (EC 3.6.1.34) alpha cha... 123 5e-27
sp|P37808|ATPA_BACSU ATP SYNTHASE ALPHA CHAIN (VEGETATIVE PROTEI... 123 5e-27
pir||F72231 ATP synthase F1, subunit alpha - Thermotoga maritima... 123 5e-27
pir||D81743 virulence ATPase, probable TC0090 [imported] - Chlam... 122 9e-27
sp|P50001|ATPA_STRLI ATP SYNTHASE ALPHA CHAIN >gi|480957|pir||S3... 122 1e-26
emb|CAB94542.1| (AL359152) ATP synthase alpha chain [Streptomyce... 121 1e-26
sp|P12985|ATPA_VIBAL ATP SYNTHASE ALPHA CHAIN >gi|79234|pir||S06... 121 2e-26
emb|CAA41372.1| (X58461) F1 subunit [Propionigenium modestum] 120 3e-26
sp|P29706|ATPA_PROMO ATP SYNTHASE ALPHA CHAIN, SODIUM ION SPECIF... 120 3e-26
sp|P42005|ATPA_BACST ATP SYNTHASE ALPHA CHAIN >gi|534852|dbj|BAA... 120 3e-26
pir||S66663 Na+-transporting ATP synthase (EC 3.6.1.-) alpha cha... 120 3e-26
sp|P27179|ATPA_SYNY3 ATP SYNTHASE ALPHA CHAIN >gi|67817|pir||PWY... 119 6e-26
sp|P43714|ATPA_HAEIN ATP SYNTHASE ALPHA CHAIN >gi|1073878|pir||F... 119 8e-26
sp|P26679|ATPA_ENTHR ATP SYNTHASE ALPHA CHAIN >gi|153571|gb|AAA2... 117 2e-25
pir||H82036 ATP synthase F1, alpha chain VC2766 [imported] - Vib... 116 4e-25
emb|CAA69203.1| (Y07895) mitochondrial ATP synthase alpha subuni... 116 7e-25
pir||S71146 H+-transporting ATP synthase (EC 3.6.1.34) beta chai... 115 1e-24
gi|7524980 ATPase subunit 1 [Dictyostelium discoideum] >gi|11266... 114 3e-24
sp|P57122|ATPA_BUCAI ATP SYNTHASE ALPHA CHAIN >gi|10038699|dbj|B... 113 3e-24
dbj|BAA83611.1| (AB022018) F1F0-ATPase alpha subunit [Desulfovib... 112 1e-23
sp|P33252|ATPA_MYCGA ATP SYNTHASE ALPHA CHAIN >gi|282593|pir||S2... 111 1e-23
sp|Q50329|ATPA_MYCPN ATP SYNTHASE ALPHA CHAIN >gi|2127623|pir||S... 110 4e-23
sp|P47641|ATPA_MYCGE ATP SYNTHASE ALPHA CHAIN >gi|1361449|pir||D... 104 2e-21
pir||C82929 ATP synthase alpha chain UU132 [imported] - Ureaplas... 100 3e-20
gb|AAG23339.1| (AY007705) ATPase alpha subunit [Trypanosoma bruc... 100 6e-20
pir||E72733 probable membrane-associated ATPase alpha chain APE0... 95 2e-18
pir||B82941 ATP synthase alpha chain UU053 [imported] - Ureaplas... 87 5e-16
gb|AAF91182.1|AF207903_3 (AF207903) vacuolar ATP synthase subuni... 73 9e-12
>pir||C75028 h+-transporting ATP synthase, chain B (atpb) PAB1186 - Pyrococcus
abyssi (strain Orsay) >gi|5459179|emb|CAB50665.1|
(AJ248288) H+-transporting ATP synthase, subunit B
(atpB) [Pyrococcus abyssi]
Length = 465
Score = 926 bits (2367), Expect = 0.0
Identities = 465/465 (100%), Positives = 465/465 (100%)
Query: 1 MMEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVF 60
MMEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVF
Sbjct: 1 MMEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVF 60
Query: 61 EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120
EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN
Sbjct: 61 EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120
Query: 121 PVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF 180
PVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF
Sbjct: 121 PVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF 180
Query: 181 AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF
Sbjct: 181 AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
Query: 241 DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGS 300
DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGS
Sbjct: 241 DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGS 300
Query: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG 360
ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG
Sbjct: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG 360
Query: 361 KGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
KGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGY
Sbjct: 361 KGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
Query: 421 YEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRKRSS 465
YEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRKRSS
Sbjct: 421 YEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRKRSS 465
>pir||F71213 probable H(+)-transporting ATP synthase subunit B - Pyrococcus
horikoshii >gi|3258418|dbj|BAA31101.1| (AP000007) 465aa
long hypothetical H(+)-transporting ATP synthase subunit
B [Pyrococcus horikoshii]
Length = 465
Score = 919 bits (2349), Expect = 0.0
Identities = 459/465 (98%), Positives = 464/465 (99%)
Query: 1 MMEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVF 60
MM+MSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAREN+AIVQVF
Sbjct: 1 MMKMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENMAIVQVF 60
Query: 61 EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120
EGTRDLD+KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN
Sbjct: 61 EGTRDLDIKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120
Query: 121 PVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF 180
PVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF
Sbjct: 121 PVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF 180
Query: 181 AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF
Sbjct: 181 AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
Query: 241 DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGS 300
DYDM VLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRG+KGS
Sbjct: 241 DYDMHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGS 300
Query: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG 360
ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG
Sbjct: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG 360
Query: 361 KGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
KG+TREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGY
Sbjct: 361 KGKTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
Query: 421 YEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRKRSS 465
YEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRKRSS
Sbjct: 421 YEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRKRSS 465
>pir||T44675 H+-transporting ATP synthase, chain B [imported] - Desulfurococcus
sp. (strain SY) >gi|2104727|gb|AAB64417.1| (U96487)
V-ATPase B subunit [Desulfurococcus sp. SY]
Length = 465
Score = 880 bits (2248), Expect = 0.0
Identities = 440/463 (95%), Positives = 450/463 (97%)
Query: 1 MMEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVF 60
M+ EYST+SKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVL+ARENLAIVQVF
Sbjct: 1 MLMPGMEYSTVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLEARENLAIVQVF 60
Query: 61 EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120
EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN
Sbjct: 61 EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120
Query: 121 PVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF 180
PVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHN LAAQIARQAKVLGEEE F
Sbjct: 121 PVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQF 180
Query: 181 AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF
Sbjct: 181 AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
Query: 241 DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGS 300
DYDMQVLVILTDMTNY EALREISAAREEVPGRRGYPGYMYTDLATIYER GR+RGKKGS
Sbjct: 241 DYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERGGRVRGKKGS 300
Query: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG 360
ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG
Sbjct: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG 360
Query: 361 KGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
KGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETD+KYL+FADRFEREF+AQ Y
Sbjct: 361 KGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDRKYLKFADRFEREFIAQRY 420
Query: 421 YEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRKR 463
EDRSI ETLDLGWELL+ LPESELKRV+KE I+KYHPKYRKR
Sbjct: 421 DEDRSIFETLDLGWELLAELPESELKRVRKEYILKYHPKYRKR 463
>pir||T44310 H+-transporting ATP synthase (EC 3.6.1.34) beta chain [imported] -
Thermococcus sp. (strain KI) >gi|2605628|dbj|BAA23343.1|
(D88772) ATPase beta subunit [Thermococcus sp.]
Length = 463
Score = 873 bits (2232), Expect = 0.0
Identities = 435/457 (95%), Positives = 448/457 (97%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDL 66
EYST+SKIYGPLMIV+GVKGVAYGEVVEIETESGEKRKGQVL+ARE++AIVQVFEGTRDL
Sbjct: 5 EYSTVSKIYGPLMIVQGVKGVAYGEVVEIETESGEKRKGQVLEAREDMAIVQVFEGTRDL 64
Query: 67 DVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
D+KTT VRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY
Sbjct: 65 DIKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 124
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAA 186
PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHN LAAQIARQAKVLGEEE FAVVFAA
Sbjct: 125 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQFAVVFAA 184
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV
Sbjct: 185 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 244
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPI 306
LVILTDMTNY EALREISAAREEVPGRRGYPGYMYTDLATIYERAGR+RGKKGSITQMPI
Sbjct: 245 LVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQMPI 304
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 366
LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE
Sbjct: 305 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 364
Query: 367 DHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSI 426
DHPQL+QQLYAAYAEGRSLRDLVAVVGEEALSETD+KYL+FADRFEREFVAQ Y EDRSI
Sbjct: 365 DHPQLSQQLYAAYAEGRSLRDLVAVVGEEALSETDRKYLKFADRFEREFVAQRYDEDRSI 424
Query: 427 EETLDLGWELLSILPESELKRVKKEMIMKYHPKYRKR 463
ETLDLGWELL+ LPESELKRV+KE I+KYHPKYRKR
Sbjct: 425 FETLDLGWELLAELPESELKRVRKEYILKYHPKYRKR 461
>pir||F69227 ATP synthase, subunit B - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622051|gb|AAB85450.1| (AE000869)
ATP synthase, subunit B [Methanobacterium
thermoautotrophicum]
Length = 465
Score = 728 bits (1858), Expect = 0.0
Identities = 348/454 (76%), Positives = 406/454 (88%)
Query: 5 SKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTR 64
++EY+T++++ GPLMIVEGV+GVAY E+VEIET +GEKR+GQVL+ RE+LA+VQVFEGT
Sbjct: 9 TREYTTVTEVSGPLMIVEGVEGVAYSEIVEIETPTGEKRRGQVLEVREDLAVVQVFEGTS 68
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
DL+ +TT +RFTGET K+ VS+DM+GRIF+G GKPIDGGPEIIPE D++G+P+NP AR
Sbjct: 69 DLNTETTKIRFTGETAKIGVSLDMMGRIFDGTGKPIDGGPEIIPEKELDINGSPMNPAAR 128
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVF 184
+P +FIQTGIS IDGMNTLVRGQKLPIFSGSGLPHN+LAAQIARQAKVL EE FAV+F
Sbjct: 129 EFPAEFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLAEESEFAVIF 188
Query: 185 AAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDM 244
AAMGIT+EEAN+F + FE TGA+ER +F+NLADDPAIERIITPRMALT AEY AF++DM
Sbjct: 189 AAMGITHEEANYFMRDFERTGALERVTVFMNLADDPAIERIITPRMALTTAEYFAFEHDM 248
Query: 245 QVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQM 304
VLVILTD+TNYCEALREISAAREEVPGRRGYPGYMYTDLA++YERAGRI GK+GSITQM
Sbjct: 249 HVLVILTDLTNYCEALREISAAREEVPGRRGYPGYMYTDLASLYERAGRIVGKEGSITQM 308
Query: 305 PILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRT 364
PIL MP DDITHPIPDLTGYITEGQIVLSR+LHRKGIYPP+DVLPSLSRLM GIG+GRT
Sbjct: 309 PILVMPQDDITHPIPDLTGYITEGQIVLSRDLHRKGIYPPVDVLPSLSRLMSGGIGEGRT 368
Query: 365 REDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDR 424
REDH ++ QLY+AYAEGR LRDL+AVVGEEAL+E D+K+L+FAD FE+ F+ Q EDR
Sbjct: 369 REDHSGVSDQLYSAYAEGRDLRDLMAVVGEEALTERDRKFLKFADEFEKRFITQARDEDR 428
Query: 425 SIEETLDLGWELLSILPESELKRVKKEMIMKYHP 458
SIEETL+LGWELLS+LP SELKRV++E I KY P
Sbjct: 429 SIEETLNLGWELLSLLPRSELKRVREEHIPKYLP 462
>sp|Q57669|ATPB_METJA ATP SYNTHASE BETA CHAIN >gi|2118192|pir||A64327 H+-transporting ATP
synthase (EC 3.6.1.34) B chain - Methanococcus
jannaschii >gi|1590954|gb|AAB98199.1| (U67477)
H+-transporting ATP synthase, subunit B (atpB)
[Methanococcus jannaschii]
Length = 465
Score = 726 bits (1854), Expect = 0.0
Identities = 357/457 (78%), Positives = 399/457 (87%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDL 66
EYS++ I GPL+IVEGV+G AYGE+VE+ GEKR GQVL+ARE LA+VQVFEGT L
Sbjct: 9 EYSSVKSIAGPLLIVEGVEGAAYGEIVEVICPDGEKRMGQVLEAREGLAVVQVFEGTTGL 68
Query: 67 DVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
K T VRFTG T K+ VSM+MLGRIFNG GKPIDGGPEI+PE D++G PLNPV+R
Sbjct: 69 STKDTRVRFTGRTAKIGVSMEMLGRIFNGAGKPIDGGPEIVPEKELDINGYPLNPVSRKV 128
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAA 186
P DFIQTGIS IDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKV GE E FAVVFAA
Sbjct: 129 PSDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVRGEGEKFAVVFAA 188
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
MGIT EEANFF + F +TGA+ERAV+F+NLADDPAIERI+TPR+ALTVAEYLA++ DM V
Sbjct: 189 MGITSEEANFFMEEFRKTGALERAVVFINLADDPAIERILTPRIALTVAEYLAYEKDMHV 248
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPI 306
LVILTDMTNYCEALREISAAR EVPGRRGYPGYMYTDLATIYERAGR++G+ G+ITQ+PI
Sbjct: 249 LVILTDMTNYCEALREISAARNEVPGRRGYPGYMYTDLATIYERAGRVKGRTGTITQIPI 308
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 366
LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPP+DVLPSLSRL +G G G+TRE
Sbjct: 309 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPVDVLPSLSRLAGNGQGPGKTRE 368
Query: 367 DHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSI 426
DH ++ Q YAAYAEGRSLRDLVAVVGEEAL++ D+ YL+FAD FE +FV QG EDRSI
Sbjct: 369 DHKKVVNQAYAAYAEGRSLRDLVAVVGEEALTDRDRAYLKFADEFEDKFVRQGKDEDRSI 428
Query: 427 EETLDLGWELLSILPESELKRVKKEMIMKYHPKYRKR 463
EETLDL WELL+ILPE ELKRV +E+I KYHPKYRK+
Sbjct: 429 EETLDLLWELLAILPEEELKRVDRELIEKYHPKYRKK 465
>gi|11498767 H+-transporting ATP synthase, subunit B (atpB) [Archaeoglobus
fulgidus] >gi|7436117|pir||F69395 H+-transporting ATP
synthase, subunit B (atpB) homolog - Archaeoglobus
fulgidus >gi|2649415|gb|AAB90073.1| (AE001023)
H+-transporting ATP synthase, subunit B (atpB)
[Archaeoglobus fulgidus]
Length = 472
Score = 698 bits (1782), Expect = 0.0
Identities = 341/460 (74%), Positives = 395/460 (85%), Gaps = 1/460 (0%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRD 65
KEY TI+++ GPL+ VE + VAYGE+V I G R+GQVLD +++ +VQVFEGTR
Sbjct: 4 KEYKTITQVAGPLVFVEKTEPVAYGELVTITLPDGSTRRGQVLDTSKDVVVVQVFEGTRG 63
Query: 66 LDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARA 125
+D +T VRFTG+ +K+ S DMLGRI +G G+PIDGGP+I+PE+RR + GA +NP AR
Sbjct: 64 VDTSST-VRFTGDIVKLNCSQDMLGRILSGSGEPIDGGPKIVPEERRPIVGAAINPYARQ 122
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFA 185
YPR+FIQTGISAIDGMNTLVRGQKLPIFSGSGLPHN +A QIARQAKV GE E FAV+FA
Sbjct: 123 YPREFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNDIALQIARQAKVRGEGEEFAVIFA 182
Query: 186 AMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQ 245
AMGITYEEA F K FE TGA+ERAV+FLNLA+DPAIER++TPRMALT AE+LA++YD+
Sbjct: 183 AMGITYEEAYQFMKEFERTGALERAVVFLNLANDPAIERLLTPRMALTAAEFLAYEYDLH 242
Query: 246 VLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMP 305
+LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRG+KG+ITQMP
Sbjct: 243 ILVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGTITQMP 302
Query: 306 ILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTR 365
ILTMP DDITHPIPDLTGYITEGQIVLSRELH KGIYPPI+VLPSLSRLMK+GIG+G TR
Sbjct: 303 ILTMPGDDITHPIPDLTGYITEGQIVLSRELHAKGIYPPINVLPSLSRLMKEGIGEGYTR 362
Query: 366 EDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRS 425
EDHPQ Q+YAAYAEG LR LVA+VGEEALSE D+ +L+FAD FER FV QG YEDR
Sbjct: 363 EDHPQWNDQMYAAYAEGVDLRGLVAIVGEEALSERDRLFLKFADEFERRFVQQGRYEDRD 422
Query: 426 IEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRKRSS 465
IE TLDLGWELL++LPE EL +V+++ I KYHPKYRK+ +
Sbjct: 423 IEYTLDLGWELLAMLPERELTKVERKFIEKYHPKYRKKEA 462
>pir||D72733 probable membrane-associated ATPase beta chain APE0404 - Aeropyrum
pernix (strain K1) >gi|5104044|dbj|BAA79360.1|
(AP000059) 466aa long hypothetical membrane-associated
ATPase beta chain [Aeropyrum pernix]
Length = 466
Score = 673 bits (1718), Expect = 0.0
Identities = 324/456 (71%), Positives = 390/456 (85%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRD 65
+EY IS+I GPL++VEGV VAY E+VE+ET +GEKR+G+VL+ A+VQVFEGT
Sbjct: 9 REYRNISEIKGPLLVVEGVSRVAYDEIVEVETAAGEKRRGRVLEVGMGYAVVQVFEGTTG 68
Query: 66 LDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARA 125
+ T VRF G L++PV+ DMLGRI NG+G+PIDGGP+I ++RRDV+GAPLNP RA
Sbjct: 69 ISPTGTVVRFMGRPLEIPVTEDMLGRIMNGLGEPIDGGPKIDADERRDVNGAPLNPAERA 128
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFA 185
YP DFIQTG+SAIDGMNTLVRGQKLPIFSG+GLPHN+LAAQIARQA V GEEE FAVVF+
Sbjct: 129 YPEDFIQTGVSAIDGMNTLVRGQKLPIFSGAGLPHNRLAAQIARQATVRGEEEEFAVVFS 188
Query: 186 AMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQ 245
A+GI Y++ FFKK FEETGA+ R +F+NLAD+PA+ R+ITPR ALT+AEYLA++ DM
Sbjct: 189 AIGIKYDDFLFFKKFFEETGALGRVAMFVNLADEPAMIRLITPRAALTLAEYLAYERDMH 248
Query: 246 VLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMP 305
VLVI+TDMTNY EALREISAAREEVPGR+GYPGY+Y+DLA+IYERAGR++GKKGSITQMP
Sbjct: 249 VLVIITDMTNYAEALREISAAREEVPGRQGYPGYLYSDLASIYERAGRVKGKKGSITQMP 308
Query: 306 ILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTR 365
ILTMP+DDITHPIPDLTGYITEGQIVLSRELH +GIYPPI+VL SLSRLMK+GIG G+TR
Sbjct: 309 ILTMPNDDITHPIPDLTGYITEGQIVLSRELHNRGIYPPINVLMSLSRLMKEGIGPGKTR 368
Query: 366 EDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRS 425
EDH +++ QLYA+Y+ G LR L AVVGEE+LSE D++YL+FAD FE+ F+ QG E+RS
Sbjct: 369 EDHAEVSNQLYASYSRGVELRSLTAVVGEESLSERDRRYLKFADLFEQRFLKQGERENRS 428
Query: 426 IEETLDLGWELLSILPESELKRVKKEMIMKYHPKYR 461
IEETLD+ WE+LS+LPE EL +K+E I KYHPKYR
Sbjct: 429 IEETLDIAWEILSVLPEEELVNIKEETIKKYHPKYR 464
>emb|CAC11154.1| (AL445063) probable ATP synthase (subunit B) [Thermoplasma
acidophilum]
Length = 476
Score = 644 bits (1642), Expect = 0.0
Identities = 311/449 (69%), Positives = 372/449 (82%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y ++S+I GPL+ VE V AY E+V+IE E+GE R+GQVLD R+ LAIVQ+F T +
Sbjct: 22 YKSVSQISGPLLFVENVPNAAYNEMVDIELENGETRQGQVLDTRKGLAIVQIFGATTGIG 81
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
+ T+V+F GET ++P+S DMLGR+FNGIG+PIDGGPEII ++R ++ +NP +R P
Sbjct: 82 TQGTTVKFRGETARLPISEDMLGRVFNGIGEPIDGGPEIIAKERMEITSNAINPYSREEP 141
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAM 187
+FI+TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL E+FAVVF AM
Sbjct: 142 SEFIETGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLDSSENFAVVFGAM 201
Query: 188 GITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVL 247
GIT EEAN+F F ETGA+ R+V+FLNL+ DP++ERII PR+ALT AEYLAF M +L
Sbjct: 202 GITSEEANYFTNQFRETGALSRSVMFLNLSSDPSMERIILPRIALTTAEYLAFQKGMHIL 261
Query: 248 VILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPIL 307
VILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDL+TIYERAG+++G GSITQ+PIL
Sbjct: 262 VILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLSTIYERAGKLKGNNGSITQIPIL 321
Query: 308 TMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRED 367
TMP DDITHP+PDLTGYITEGQIV+SR+L+RK +YP IDVL SLSRLM GIGKGRTRED
Sbjct: 322 TMPGDDITHPVPDLTGYITEGQIVISRDLNRKDMYPGIDVLLSLSRLMNQGIGKGRTRED 381
Query: 368 HPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIE 427
H LA QLYAAYA G+ LR L A+VGEEALS+ D+KYL FAD FE ++ QG++EDRSIE
Sbjct: 382 HRGLADQLYAAYASGKDLRSLTAIVGEEALSQNDRKYLHFADTFESRYIKQGFFEDRSIE 441
Query: 428 ETLDLGWELLSILPESELKRVKKEMIMKY 456
+TL LGW+LL+ LP ++KRVK + I KY
Sbjct: 442 DTLGLGWDLLADLPVQDMKRVKPDHIQKY 470
>sp|Q48333|ATPB_HALVO ATP SYNTHASE BETA CHAIN >gi|629403|pir||S45145 H+-transporting ATP
synthase (EC 3.6.1.34) chain B [validated] - Haloferax
volcanii >gi|496905|emb|CAA56052.1| (X79516) membrane
ATPase [Haloferax volcanii] >gi|1098058|prf||2115218E
ATPase:SUBUNIT=beta [Haloferax volcanii]
Length = 468
Score = 640 bits (1632), Expect = 0.0
Identities = 313/457 (68%), Positives = 373/457 (81%), Gaps = 6/457 (1%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRD 65
KEY TI++I GPL+ E + + Y E+VEIET GE ++GQVL++ E L +QVFEGT
Sbjct: 2 KEYQTITEISGPLVFAEVDEPIGYDEIVEIETPQGETKRGQVLESSEGLVAIQVFEGTSG 61
Query: 66 LDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARA 125
+D + SVRF GETLK+PV+ D+LGR+ +G G+PIDGGPEI+P++RRD+ GA +NP +R
Sbjct: 62 ID-RNASVRFLGETLKMPVTEDLLGRVLDGSGQPIDGGPEIVPDERRDIVGAAINPYSRE 120
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKV-----LGEEESF 180
YP +FIQTG+SAIDGMNTLVRGQKLPIFS SGLPHN LA QIARQA V GEE F
Sbjct: 121 YPEEFIQTGVSAIDGMNTLVRGQKLPIFSASGLPHNDLALQIARQATVPEDEESGEESEF 180
Query: 181 AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
AVVF AMGIT EEAN F + FE TGA+ER+V+F NLADDPA+ER +TPR+ALT AEYLAF
Sbjct: 181 AVVFGAMGITQEEANEFMEDFERTGALERSVVFTNLADDPAVERTVTPRLALTTAEYLAF 240
Query: 241 DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGS 300
D D VLVILTDMTNYCEALREI AAREEVPGRRGYPGYMYTDLA +YERAGRI+G+ GS
Sbjct: 241 DKDYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIQGRDGS 300
Query: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG 360
+TQ+PILTMP DD THPIPDLTGYITEGQI + R+L+ +GI PPI+ LPSLSRLM DGIG
Sbjct: 301 VTQIPILTMPGDDDTHPIPDLTGYITEGQIYIDRDLNSQGIRPPINPLPSLSRLMDDGIG 360
Query: 361 KGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
+G TREDH ++ Q+YAAYAEG LRDLV +VG EALSE D KYL+FA+RFE EFV QG+
Sbjct: 361 EGLTREDHADVSDQMYAAYAEGEDLRDLVNIVGREALSERDNKYLDFAERFEAEFVNQGF 420
Query: 421 YEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYH 457
DRSIE+TLD+GW+LLS LP+SEL R+ +E+I Y+
Sbjct: 421 DTDRSIEDTLDIGWDLLSTLPKSELNRIDEELIEDYY 457
>sp|P22663|ATPB_METBA ATP SYNTHASE BETA CHAIN >gi|80985|pir||B34283 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Methanosarcina
barkeri >gi|149821|gb|AAA72216.1| (J04836) ATPase beta
subunit [Methanosarcina barkeri]
Length = 460
Score = 638 bits (1628), Expect = 0.0
Identities = 306/459 (66%), Positives = 377/459 (81%), Gaps = 1/459 (0%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGT 63
M KEY TI++I GPL+ VE + V Y E+V I G R+G+VLD+ ++ ++Q+FEGT
Sbjct: 1 MVKEYKTITQIAGPLVFVEKTEPVGYKEIVTINLPDGTTRRGEVLDSSSDIVVIQIFEGT 60
Query: 64 RDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVA 123
LD K V FTGETLK+P S+D+LGRI +G G+P+DGGP I+P+ D++GA +NP A
Sbjct: 61 TGLD-KECGVVFTGETLKLPASIDLLGRILSGSGEPLDGGPRIVPDQLLDINGAAMNPYA 119
Query: 124 RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVV 183
R P+DFIQTGIS IDG NTLVRGQKLPIFS SGLPHN++A QIARQA V G E +FAVV
Sbjct: 120 RLPPKDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNEIALQIARQAAVPGSESAFAVV 179
Query: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243
FAAMGIT EEA +F FE+TGA+ERAV+FLNLADDPA+ERI+TPRMALT AEYLA+++
Sbjct: 180 FAAMGITNEEAQYFMSDFEKTGALERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHG 239
Query: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQ 303
M VLVILTD+TNY EALR++ AAR E+PGRRGYPGYMYTDLAT+YERAG ++G KGS+TQ
Sbjct: 240 MHVLVILTDITNYAEALRQMGAARNEIPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQ 299
Query: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+PIL+MP DDITHPIPDL+GYITEGQIV+SRELHRKGIYPPI+VLPSLSRLM GIG G+
Sbjct: 300 IPILSMPGDDITHPIPDLSGYITEGQIVVSRELHRKGIYPPINVLPSLSRLMNSGIGAGK 359
Query: 364 TREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYED 423
TREDH ++ Q+YA YAEGR LR LVA+VG+EALSE D K+LEFAD FE++FV QG E+
Sbjct: 360 TREDHKAVSDQMYAGYAEGRDLRGLVAIVGKEALSERDVKFLEFADLFEQQFVTQGRNEN 419
Query: 424 RSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRK 462
R+I +TLD+GW++L+ LPE++L R+ + I KYHP +RK
Sbjct: 420 RTIADTLDIGWKILAHLPENQLGRIDNKYIQKYHPAHRK 458
>sp|Q08637|NTPB_ENTHR V-TYPE SODIUM ATP SYNTHASE SUBUNIT B (NA(+)-TRANSLOCATING ATPASE
SUBUNIT B) >gi|421414|pir||B46733 Na+-transporting
ATPase (EC 3.6.1.-) chain B - Enterococcus hirae
>gi|391682|dbj|BAA02970.1| (D13816) Na+ -ATPase beta
subunit [Enterococcus hirae] >gi|487279|dbj|BAA04276.1|
(D17462) Na+ -ATPase subunit B [Enterococcus hirae]
Length = 458
Score = 626 bits (1598), Expect = e-178
Identities = 298/456 (65%), Positives = 377/456 (82%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGT 63
M KEY TI ++ GPLM VE V GV Y E++E+ ++GE R+GQVL+ +E+ A+VQ+FEGT
Sbjct: 1 MIKEYRTIKEVVGPLMAVEKVSGVKYEELIEVRMQNGEIRRGQVLEVQEDKAMVQIFEGT 60
Query: 64 RDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVA 123
+++K +SVRF G L++ VS DM+GR+F+G+G+P D GPEI+PE D++G +NP+A
Sbjct: 61 SGINLKNSSVRFLGHPLQLGVSEDMIGRVFDGLGRPKDNGPEILPEKYLDINGEVINPIA 120
Query: 124 RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVV 183
R YP +FIQTGISAID +NTLVRGQKLP+FSGSGLPH +LAAQIARQA VL + FAVV
Sbjct: 121 RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKELAAQIARQATVLDSSDDFAVV 180
Query: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243
FAA+GIT+EEA FF + F +TGAI+R+V+F+NLA+DPAIERI TPRMALT AEYLA++
Sbjct: 181 FAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLANDPAIERIATPRMALTAAEYLAYEKG 240
Query: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQ 303
M VLVI+TDMTNY EALREISAAR EVPGRRGYPGY+YT+LAT++ERAGRIRG KGS+TQ
Sbjct: 241 MHVLVIMTDMTNYAEALREISAARREVPGRRGYPGYLYTNLATLFERAGRIRGLKGSVTQ 300
Query: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+PILTMP+DD THPIPDLTGYITEGQI+L+REL++ GI PPIDVLPSLSRL G G G+
Sbjct: 301 IPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKSGIQPPIDVLPSLSRLKDKGTGAGK 360
Query: 364 TREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYED 423
TREDH QL+AAYA+G+ ++L V+GE ALS+ DK Y +FA+RFE E+V QG+Y +
Sbjct: 361 TREDHAATMNQLFAAYAQGKQAKELAVVLGESALSDIDKIYAKFAERFENEYVNQGFYTN 420
Query: 424 RSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
R+I ETLDLGWELL++LP +ELKR+K +++ KY P+
Sbjct: 421 RTITETLDLGWELLAMLPRTELKRIKDDLLDKYLPE 456
>gb|AAG20276.1| (AE005102) H+-transporting ATP synthase subunit B; AtpB
[Halobacterium sp. NRC-1]
Length = 471
Score = 621 bits (1584), Expect = e-177
Identities = 303/460 (65%), Positives = 370/460 (79%), Gaps = 9/460 (1%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRD 65
KEY TI+++ GPL+ VE + + Y E+VEIET +G+ ++GQVL++ + +QVFEGT
Sbjct: 2 KEYQTITEVSGPLVYVETDEPIGYDEIVEIETPNGDVKRGQVLESSDGFVAIQVFEGTEG 61
Query: 66 LDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARA 125
+ K SVRF GETLK+PV+ D+LGR+ +G G PIDGGP+I+P+DR D+ G +NP AR
Sbjct: 62 VG-KDASVRFLGETLKMPVTEDLLGRVLDGSGNPIDGGPDIVPDDRVDIVGEAINPHARE 120
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEE-------- 177
YP +FIQTG+S IDGMNTLVRGQKLPIFSGSGLPH+ LA QIARQA V EE
Sbjct: 121 YPEEFIQTGVSGIDGMNTLVRGQKLPIFSGSGLPHSDLALQIARQASVPEEEAETDDDEG 180
Query: 178 ESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEY 237
FAVVF AMGIT EEAN F FE TGA+ER+V+F+NLADDPA+ER +TPRMALT AEY
Sbjct: 181 SEFAVVFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTVTPRMALTTAEY 240
Query: 238 LAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK 297
LAF+ D VLVILTDMTNYCEALR+I AAREEVPGRRGYPGYMYTDLA +YERAGRI GK
Sbjct: 241 LAFEKDYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGK 300
Query: 298 KGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKD 357
+GS+TQ+PILTMP DD THPIPDLTGYITEGQI+++R+L+ +G+ PP++VLPSLSRLM D
Sbjct: 301 EGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIMMNRDLNSQGVTPPVNVLPSLSRLMDD 360
Query: 358 GIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVA 417
GIG+G TR DH ++ QLYAAYAEG LRDLV +VG EALSE D +YL+FADRFE EF+
Sbjct: 361 GIGEGLTRADHGDVSDQLYAAYAEGEELRDLVNIVGREALSERDNRYLDFADRFEAEFID 420
Query: 418 QGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYH 457
QG+ +R IEETLDLGWELLS+ P++EL RV +++I ++
Sbjct: 421 QGFKTNRDIEETLDLGWELLSMFPKTELNRVDEDLIEDHY 460
>sp|P25164|ATPB_HALSA ATP SYNTHASE BETA CHAIN >gi|81071|pir||S14733 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain [validated] -
Halobacterium salinarum >gi|43641|emb|CAA49776.1|
(X70294) ATP synthase subunit [Halobacterium salinarum]
Length = 471
Score = 620 bits (1581), Expect = e-176
Identities = 302/460 (65%), Positives = 370/460 (79%), Gaps = 9/460 (1%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRD 65
KEY TI+++ GPL+ VE + + Y E+V+IET +G+ ++GQVL++ + +QVFEGT
Sbjct: 2 KEYQTITEVSGPLVYVETDEPIGYDEIVQIETPNGDVKRGQVLESSDGFVAIQVFEGTEG 61
Query: 66 LDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARA 125
+ K SVRF GETLK+PV+ D+LGR+ +G G PIDGGP+I+P+DR D+ G +NP AR
Sbjct: 62 VG-KDASVRFLGETLKMPVTEDLLGRVLDGSGNPIDGGPDIVPDDRVDIVGEAINPHARE 120
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEE-------- 177
YP +FIQTG+S IDGMNTLVRGQKLPIFSGSGLPH+ LA QIARQA V EE
Sbjct: 121 YPEEFIQTGVSGIDGMNTLVRGQKLPIFSGSGLPHSDLALQIARQASVPEEEAETDDDEG 180
Query: 178 ESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEY 237
FAVVF AMGIT EEAN F FE TGA+ER+V+F+NLADDPA+ER +TPRMALT AEY
Sbjct: 181 SEFAVVFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTVTPRMALTTAEY 240
Query: 238 LAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK 297
LAF+ D VLVILTDMTNYCEALR+I AAREEVPGRRGYPGYMYTDLA +YERAGRI GK
Sbjct: 241 LAFEKDYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGK 300
Query: 298 KGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKD 357
+GS+TQ+PILTMP DD THPIPDLTGYITEGQI+++R+L+ +G+ PP++VLPSLSRLM D
Sbjct: 301 EGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIMMNRDLNSQGVTPPVNVLPSLSRLMDD 360
Query: 358 GIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVA 417
GIG+G TR DH ++ QLYAAYAEG LRDLV +VG EALSE D +YL+FADRFE EF+
Sbjct: 361 GIGEGLTRADHGDVSDQLYAAYAEGEELRDLVNIVGREALSERDNRYLDFADRFEAEFID 420
Query: 418 QGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYH 457
QG+ +R IEETLDLGWELLS+ P++EL RV +++I ++
Sbjct: 421 QGFKTNRDIEETLDLGWELLSMFPKTELNRVDEDLIEDHY 460
>emb|CAB57735.1| (Y18930) atpase-beta chain (membrane-associated) [Sulfolobus
solfataricus]
Length = 463
Score = 618 bits (1576), Expect = e-176
Identities = 296/456 (64%), Positives = 369/456 (80%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRD 65
+E+S IS I GPL+ V+GV +Y E+VEIE +GE+R+G V+D++ +AIVQVFEGT
Sbjct: 5 REFSNISMIKGPLVYVQGVTDASYNELVEIEMPNGERRRGLVIDSQMGIAIVQVFEGTTG 64
Query: 66 LDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARA 125
+ T +R G L+V +S +MLGRIFN +G +D GP +I ++RD++G+PLNP AR
Sbjct: 65 VSPTGTKIRMLGRGLEVKISEEMLGRIFNPLGDSLDNGPPVIKGEKRDINGSPLNPAARE 124
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFA 185
YP +FIQTGISAIDG+N L+RGQKLPIFSGSGLP N LAAQIA+QA V GEE +FAVVFA
Sbjct: 125 YPEEFIQTGISAIDGLNALLRGQKLPIFSGSGLPANMLAAQIAKQATVRGEESNFAVVFA 184
Query: 186 AMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQ 245
A+G Y++A FF+K FEETGAI R + ++LA++P + + +TP+ ALT+AEYLAF+ DM
Sbjct: 185 AIGARYDDALFFRKFFEETGAINRVAMIVSLANEPPVMKTLTPKTALTLAEYLAFEQDMH 244
Query: 246 VLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMP 305
VL IL DMTNYCEALREISAAREEVPGR GYPGYMYTDLATIYERAG++ GKKGSITQMP
Sbjct: 245 VLAILIDMTNYCEALREISAAREEVPGRGGYPGYMYTDLATIYERAGKVIGKKGSITQMP 304
Query: 306 ILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTR 365
ILTMP+DDITHPIPDLTGYITEGQIVL R L+ KGIYPPI+VL SLSRL KDGIG+G+TR
Sbjct: 305 ILTMPNDDITHPIPDLTGYITEGQIVLDRALYNKGIYPPINVLMSLSRLAKDGIGEGKTR 364
Query: 366 EDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRS 425
+DH ++ QL+A+YA R L A++GE++LSE D+KYL F + FER+FV+QG+ E+RS
Sbjct: 365 DDHKDVSNQLFASYARAVDTRGLAAIIGEDSLSEVDRKYLLFGELFERKFVSQGFNENRS 424
Query: 426 IEETLDLGWELLSILPESELKRVKKEMIMKYHPKYR 461
IE TLD+GWE+LS+LPESEL +K + I KYHP YR
Sbjct: 425 IETTLDIGWEILSVLPESELTNIKTQYIQKYHPNYR 460
>gb|AAK40880.1| ATP synthase subunit B (atpB) [Sulfolobus solfataricus]
Length = 463
Score = 618 bits (1576), Expect = e-176
Identities = 296/456 (64%), Positives = 369/456 (80%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRD 65
+E+S IS I GPL+ V+GV +Y E+VEIE +GE+R+G V+D++ +AIVQVFEGT
Sbjct: 5 REFSNISMIKGPLVYVQGVTDASYNELVEIEMPNGERRRGLVIDSQMGIAIVQVFEGTTG 64
Query: 66 LDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARA 125
+ T +R G L+V +S +MLGRIFN +G +D GP +I ++RD++G+PLNP AR
Sbjct: 65 VSPTGTKIRMLGRGLEVKISEEMLGRIFNPLGDSLDNGPPVIKGEKRDINGSPLNPAARE 124
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFA 185
YP +FIQTGISAIDG+N L+RGQKLPIFSGSGLP N LAAQIA+QA V GEE +FAVVFA
Sbjct: 125 YPEEFIQTGISAIDGLNALLRGQKLPIFSGSGLPANMLAAQIAKQATVRGEESNFAVVFA 184
Query: 186 AMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQ 245
A+G Y++A FF+K FEETGAI R + ++LA++P + + +TP+ ALT+AEYLAF+ DM
Sbjct: 185 AIGARYDDALFFRKFFEETGAINRVAMIVSLANEPPVMKTLTPKTALTLAEYLAFEQDMH 244
Query: 246 VLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMP 305
VL IL DMTNYCEALREISAAREEVPGR GYPGYMYTDLATIYERAG++ GKKGSITQMP
Sbjct: 245 VLAILIDMTNYCEALREISAAREEVPGRGGYPGYMYTDLATIYERAGKVIGKKGSITQMP 304
Query: 306 ILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTR 365
ILTMP+DDITHPIPDLTGYITEGQIVL R L+ KGIYPPI+VL SLSRL KDGIG+G+TR
Sbjct: 305 ILTMPNDDITHPIPDLTGYITEGQIVLDRALYNKGIYPPINVLMSLSRLAKDGIGEGKTR 364
Query: 366 EDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRS 425
+DH ++ QL+A+YA R L A++GE++LSE D+KYL F + FER+FV+QG+ E+RS
Sbjct: 365 DDHKDVSNQLFASYARAVDTRGLAAIIGEDSLSEVDRKYLLFGELFERKFVSQGFNENRS 424
Query: 426 IEETLDLGWELLSILPESELKRVKKEMIMKYHPKYR 461
IE TLD+GWE+LS+LPESEL +K + I KYHP YR
Sbjct: 425 IETTLDIGWEILSVLPESELTNIKTQYIQKYHPNYR 460
>pir||B56812 H+-transporting ATP synthase (EC 3.6.1.34) beta chain [validated] -
Thermus aquaticus >gi|49049|emb|CAA45341.1| (X63855)
ATPase beta-subunit [Thermus thermophilus]
>gi|1510119|dbj|BAA09874.1| (D63799) vacuolar type ATP
synthase subunit [Thermus thermophilus]
Length = 478
Score = 617 bits (1573), Expect = e-175
Identities = 308/461 (66%), Positives = 368/461 (79%), Gaps = 8/461 (1%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGT 63
+ KEY+ I+ I GPL+ VE K +AYG +V+I+ +G R GQV++ E A++QVFE T
Sbjct: 4 LKKEYTGITYISGPLLFVENAKDLAYGAIVDIKDGTGRVRGGQVIEVSEEYAVIQVFEET 63
Query: 64 RDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVA 123
LD+ TTSV + + ++ VS +MLGR FNGIGKPIDG P I PE R + G PLNPVA
Sbjct: 64 TGLDLATTSVSWVEDVARLGVSKEMLGRRFNGIGKPIDGLPPITPEKRLPITGLPLNPVA 123
Query: 124 RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE------- 176
R P FIQTGIS ID MNTLVRGQKLPIFSGSGLP N++AAQIARQA V +
Sbjct: 124 RRKPEQFIQTGISTIDVMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEK 183
Query: 177 EESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAE 236
EE FAVVFAAMGIT E ++F + FE TGA+ R+VLFLN ADDP IERI+TPRMALTVAE
Sbjct: 184 EEPFAVVFAAMGITQRELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAE 243
Query: 237 YLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRG 296
YLAF++D VLVILTDMTNYCEALREI AAREE+PGRRGYPGYMYTDLATIYERAG + G
Sbjct: 244 YLAFEHDYHVLVILTDMTNYCEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVEG 303
Query: 297 KKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMK 356
KKGS+TQ+PIL+MPDDD THPIPDLTGYITEGQI LSRELHRKGIYPPID LPSLSRLM
Sbjct: 304 KKGSVTQIPILSMPDDDRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMN 363
Query: 357 DGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFV 416
+G+GKG+TREDH Q++ QLY+AYA G +R LVA++GE+AL+E D++YL+FAD FER F+
Sbjct: 364 NGVGKGKTREDHKQVSDQLYSAYANGVDIRKLVAIIGEDALTENDRRYLQFADAFERFFI 423
Query: 417 AQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYH 457
QG ++RSIEE+L + W LLS+LP+ ELKR+ K+ I KY+
Sbjct: 424 NQG-QQNRSIEESLQIAWALLSMLPQGELKRISKDHIGKYY 463
>sp|P13052|ATPB_SULAC MEMBRANE-ASSOCIATED ATPASE BETA CHAIN (SUL-ATPASE BETA) (ATPASE
SUBUNIT B) >gi|99255|pir||A32118 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Sulfolobus
acidocaldarius >gi|152924|gb|AAA72702.1| (J04740) ATP
synthase beta subunit [Sulfolobus acidocaldarius]
Length = 465
Score = 614 bits (1567), Expect = e-175
Identities = 297/456 (65%), Positives = 365/456 (79%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRD 65
+EYS IS I GPL+ V+GV AY E+VEIE G KR+G V+D++ + VQVFEGT
Sbjct: 7 REYSNISMIKGPLIAVQGVSDAAYNELVEIEMPDGSKRRGLVVDSQMGVTFVQVFEGTTG 66
Query: 66 LDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARA 125
+ + VRF G L+V +S +MLGRIFN +G+P+D GP +I ++R+++G P+NP R
Sbjct: 67 ISPTGSKVRFLGRGLEVKISEEMLGRIFNPLGEPLDNGPPVIGGEKRNINGDPINPATRE 126
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFA 185
YP +FIQTGISAIDG+N+L+RG K+ SGSGLP N LAAQIA+QA V GEE +FAVVFA
Sbjct: 127 YPEEFIQTGISAIDGLNSLLRGSKITDLSGSGLPANTLAAQIAKQATVRGEESNFAVVFA 186
Query: 186 AMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQ 245
A+G+ Y+EA FF+K FEETGAI R +F+ LA+DP +I+TP+ ALT+AEYLAF+ DM
Sbjct: 187 AIGVRYDEALFFRKFFEETGAINRVAMFVTLANDPPSLKILTPKTALTLAEYLAFEKDMH 246
Query: 246 VLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMP 305
VL IL DMTNYCEALRE+SA+REEVPGR GYPGYMYTDLATIYERAG++ GKKGSITQMP
Sbjct: 247 VLAILIDMTNYCEALRELSASREEVPGRGGYPGYMYTDLATIYERAGKVIGKKGSITQMP 306
Query: 306 ILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTR 365
ILTMP+DD+THPIPDLTGYITEGQIVL R L KGIYPPI+VL SLSRLMKDGIG+G+TR
Sbjct: 307 ILTMPNDDMTHPIPDLTGYITEGQIVLDRSLFNKGIYPPINVLMSLSRLMKDGIGEGKTR 366
Query: 366 EDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRS 425
+DH L+ QL+AAYA + +R L A++GE++LSE D+KYL FA+ FER FVAQG E+RS
Sbjct: 367 DDHKDLSNQLFAAYARAQDIRGLAAIIGEDSLSEVDRKYLLFAEAFERRFVAQGVNENRS 426
Query: 426 IEETLDLGWELLSILPESELKRVKKEMIMKYHPKYR 461
IE TLD+GWE+LSILPESEL ++ E I KYHP YR
Sbjct: 427 IETTLDIGWEVLSILPESELSLIRSEYIKKYHPNYR 462
>sp|Q60187|ATPB_METMA ATP SYNTHASE BETA CHAIN (ATPASE SUBUNIT B) >gi|11266661|pir||T45108
H+-transporting ATP synthase (EC 3.6.1.34) chain B
[imported] - Methanosarcina mazei
>gi|1199639|gb|AAC06376.1| (U47274) A1AO H+ ATPase,
subunit B [Methanosarcina mazei]
Length = 460
Score = 614 bits (1566), Expect = e-175
Identities = 301/459 (65%), Positives = 370/459 (80%), Gaps = 1/459 (0%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGT 63
M KEY TI++I GPL+ VE + V Y E+V I+ G R+GQVLD+ L + + +
Sbjct: 1 MVKEYKTITQIAGPLIFVEKTEPVGYNEIVNIKMGDGTVRRGQVLDSSLTLWLSRFSKVL 60
Query: 64 RDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVA 123
L +T V FTGETLK+P S+D+LGRI G G+P DGGP I+P+ D++GA +NP A
Sbjct: 61 VGL-TRTAVVIFTGETLKLPASVDLLGRILFGSGEPRDGGPRIVPDQLLDINGAAMNPYA 119
Query: 124 RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVV 183
R P+DFIQTGIS IDG NTLVRGQKLPIFS SGLPHN++A QIARQA V G E +FAVV
Sbjct: 120 RLPPKDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNEIALQIARQASVPGSESAFAVV 179
Query: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243
FAAMGIT EEA +F FE+TGA+ERAV+FLNLAD+PA+ERI+TPRMALT AEYLA+++
Sbjct: 180 FAAMGITNEEAQYFMSDFEKTGALERAVVFLNLADEPAVERIVTPRMALTAAEYLAYEHG 239
Query: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQ 303
M VLVILTD+TNY EALR++ AAR EVPGRRGYPGYMYTDLAT+YERAG ++G KGS+TQ
Sbjct: 240 MHVLVILTDITNYAEALRQMGAARNEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQ 299
Query: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+PIL+MP DDITHPIPDL+GYITEGQIV++RELHRKGIYPPI+VLPSLSRLM GIG G+
Sbjct: 300 IPILSMPGDDITHPIPDLSGYITEGQIVVARELHRKGIYPPINVLPSLSRLMNSGIGAGK 359
Query: 364 TREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYED 423
TREDH ++ Q+YA YAEGR LR LVA+VG+EALSE D K+LEFAD FE +FV QG E+
Sbjct: 360 TREDHKAVSDQMYAGYAEGRDLRGLVAIVGKEALSERDTKFLEFADLFEDKFVRQGRNEN 419
Query: 424 RSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRK 462
R+IE+TL++GW++L+ LPE++L R+ + I KYHP +RK
Sbjct: 420 RTIEDTLEIGWQILTHLPENQLGRIDNKYIQKYHPAHRK 458
>sp|Q40079|VAT2_HORVU VACUOLAR ATP SYNTHASE SUBUNIT B ISOFORM 2 (V-ATPASE B SUBUNIT)
>gi|167110|gb|AAA81331.1| (L11873) vacuolar ATPase B
subunit [Hordeum vulgare]
Length = 483
Score = 585 bits (1493), Expect = e-166
Identities = 287/470 (61%), Positives = 358/470 (76%), Gaps = 12/470 (2%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFE 61
+E+ EY T+S + GPL+I++ VKG Y E+V I G R+GQVL+ A+VQVFE
Sbjct: 10 LEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFE 69
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
GT +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP
Sbjct: 70 GTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINP 129
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------- 174
R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++
Sbjct: 130 SERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEQSK 189
Query: 175 -----GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPR 229
GEE++FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR
Sbjct: 190 HAAEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPR 249
Query: 230 MALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYE 289
+ALT AEYLA++ VLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLATIYE
Sbjct: 250 IALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYE 309
Query: 290 RAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLP 349
RAGRI G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+LH + IYPPI+VLP
Sbjct: 310 RAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLP 369
Query: 350 SLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFAD 409
SLSRLMK IG+G TR DH ++ QLYA YA G+ ++ + AVVGEEALS D YLEF D
Sbjct: 370 SLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLD 429
Query: 410 RFEREFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
+FER+FVAQG Y+ R+I ++LDL W LL I P L R+ + + +++ +
Sbjct: 430 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSR 479
>gi|6319603 vacuolar ATPase V1 domain subunit B (60 kDa); Vma2p [Saccharomyces
cerevisiae] >gi|586211|sp|P16140|VATB_YEAST VACUOLAR ATP
SYNTHASE SUBUNIT B (V-ATPASE 57 KD SUBUNIT)
>gi|626170|pir||S45996 H+-transporting ATPase (EC
3.6.1.35) chain B, vacuolar - yeast (Saccharomyces
cerevisiae) >gi|496858|emb|CAA53486.1| (X75891) ATPsv
[Saccharomyces cerevisiae] >gi|536413|emb|CAA85084.1|
(Z35996) ORF YBR127c [Saccharomyces cerevisiae]
>gi|1582514|prf||2118402B ATPsv gene [Saccharomyces
cerevisiae]
Length = 517
Score = 585 bits (1491), Expect = e-166
Identities = 282/462 (61%), Positives = 359/462 (77%), Gaps = 8/462 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y+T+S + GPL+I+E VK Y E+V + G R+GQVL+ R + AIVQVFEGT +D
Sbjct: 28 YNTVSGVNGPLVILEKVKFPRYNEIVNLTLPDGTVRQGQVLEIRGDRAIVQVFEGTSGID 87
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
VK T+V FTGE+L++PVS DMLGRIF+G G+PID GP++ ED D++G+P+NP AR YP
Sbjct: 88 VKKTTVEFTGESLRIPVSEDMLGRIFDGSGRPIDNGPKVFAEDYLDINGSPINPYARIYP 147
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL--------GEEES 179
+ I TG+SAID MN++ RGQK+PIFS SGLPHN++AAQI RQA ++ G EE+
Sbjct: 148 EEMISTGVSAIDTMNSIARGQKIPIFSASGLPHNEIAAQICRQAGLVRPTKDVHDGHEEN 207
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
F++VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR+ALT AEYLA
Sbjct: 208 FSIVFAAMGVNLETARFFKQDFEENGSLERTSLFLNLANDPTIERIITPRLALTTAEYLA 267
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VL ILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDL+TIYERAGR+ G+ G
Sbjct: 268 YQTERHVLTILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVEGRNG 327
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH KGIYPPI+VLPSLSRLMK I
Sbjct: 328 SITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQLHNKGIYPPINVLPSLSRLMKSAI 387
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ + AVVGEEALS DK LEF ++FE+ F+ QG
Sbjct: 388 GEGMTRKDHGDVSNQLYAKYAIGKDAAAMKAVVGEEALSIEDKLSLEFLEKFEKTFITQG 447
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYR 461
YEDR++ E+LD W LL I P+ L R+ +++ +++ + R
Sbjct: 448 AYEDRTVFESLDQAWSLLRIYPKEMLNRISPKILDEFYDRAR 489
>gb|AAA30391.1| (M83131) H+-ATPase B subunit [Bos taurus]
Length = 511
Score = 584 bits (1490), Expect = e-166
Identities = 280/460 (60%), Positives = 355/460 (76%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK Y E+V + G KR GQVL+ + A+VQVFEGT +D
Sbjct: 47 YKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRTGQVLEVSGSKAVVQVFEGTSGID 106
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K TS FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R YP
Sbjct: 107 AKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYP 166
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + EE+
Sbjct: 167 EEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEEN 226
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FEE G+++ LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 227 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLA 286
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 287 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNG 346
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 347 SITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 406
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FER F+AQG
Sbjct: 407 GEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQG 466
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
YE+R++ ETLD+GW+LL I P+ LKR+ + + +++P+
Sbjct: 467 PYENRTVYETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPR 506
>gi|4502311 ATPase, H+ transporting, lysosomal (vacuolar proton pump), beta
polypeptide, 56/58kD, isoform 2 [Homo sapiens]
>gi|401320|sp|P21281|VAT2_HUMAN VACUOLAR ATP SYNTHASE
SUBUNIT B, BRAIN ISOFORM (ENDOMEMBRANE PROTON PUMP 58 KD
SUBUNIT) (V-ATPASE B SUBUNIT) (HO57)
>gi|543056|pir||B44138 H+-transporting ATPase (EC
3.6.1.35) 56K chain, vacuolar, brain isoform - human
>gi|37794|emb|CAA44721.1| (X62949) vacuolar isoform 2 of
H+ATPase Mr 56,000 subunit [Homo sapiens]
Length = 511
Score = 584 bits (1490), Expect = e-166
Identities = 280/460 (60%), Positives = 355/460 (76%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK Y E+V + G KR GQVL+ + A+VQVFEGT +D
Sbjct: 47 YKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGID 106
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K TS FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R YP
Sbjct: 107 AKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYP 166
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + EE+
Sbjct: 167 EEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEEN 226
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FEE G+++ LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 227 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLA 286
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 287 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNG 346
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 347 SITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 406
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FER F+AQG
Sbjct: 407 GEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQG 466
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
YE+R++ ETLD+GW+LL I P+ LKR+ + + +++P+
Sbjct: 467 PYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPR 506
>gb|AAA66890.1| (J04450) vacuolar H+-ATPase 52 kDa subunit [Saccharomyces
cerevisiae]
Length = 515
Score = 584 bits (1488), Expect = e-165
Identities = 281/462 (60%), Positives = 359/462 (76%), Gaps = 8/462 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y+T+S + GPL+I+E VK Y E+V + G R+GQVL+ R + AIVQ+FEGT +D
Sbjct: 28 YNTVSGVNGPLVILEKVKFPRYNEIVNLTLPDGTVRQGQVLEIRGDRAIVQLFEGTSGID 87
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
VK T+V FTGE+L++PVS DMLGRIF+G G+PID GP++ ED D++G+P+NP AR YP
Sbjct: 88 VKKTTVEFTGESLRIPVSEDMLGRIFDGSGRPIDNGPKVFAEDYLDINGSPINPYARIYP 147
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL--------GEEES 179
+ I TG+SAID MN++ RGQK+PIFS SGLPHN++AAQI RQA ++ G EE+
Sbjct: 148 EEMISTGVSAIDTMNSIARGQKIPIFSASGLPHNEIAAQICRQAGLVRPTKDVHDGHEEN 207
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
F++VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR+ALT AEYLA
Sbjct: 208 FSIVFAAMGVNLETARFFKQDFEENGSLERTSLFLNLANDPTIERIITPRLALTTAEYLA 267
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VL ILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDL+TIYERAGR+ G+ G
Sbjct: 268 YQTERHVLTILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVEGRNG 327
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH KGIYPPI+VLPSLSRLMK I
Sbjct: 328 SITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQLHNKGIYPPINVLPSLSRLMKSAI 387
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ + AVVGEEALS DK LEF ++FE+ F+ QG
Sbjct: 388 GEGMTRKDHGDVSNQLYAKYAIGKDAAAMKAVVGEEALSIEDKLSLEFLEKFEKTFITQG 447
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYR 461
YEDR++ E+LD W LL I P+ L R+ +++ +++ + R
Sbjct: 448 AYEDRTVFESLDQAWSLLRIYPKEMLNRISPKILDEFYDRAR 489
>sp|P31408|VAB2_BOVIN VACUOLAR ATP SYNTHASE SUBUNIT B, BRAIN ISOFORM (ENDOMEMBRANE PROTON
PUMP 58 KDA SUBUNIT) (V-ATPASE B SUBUNIT)
>gi|479214|pir||S32614 H+-transporting ATPase (EC
3.6.1.35) chain B - bovine >gi|297129|emb|CAA41275.1|
(X58385) H+-ATPase non-catalytic subunit B [Bos taurus]
Length = 511
Score = 584 bits (1488), Expect = e-165
Identities = 279/460 (60%), Positives = 355/460 (76%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK Y E+V + G KR GQVL+ + A+VQVFEGT +D
Sbjct: 47 YKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGID 106
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K TS FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R YP
Sbjct: 107 AKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYP 166
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + EE+
Sbjct: 167 EEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEEN 226
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FE+ G+++ LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 227 FAIVFAAMGVNMETARFFKSDFEQNGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLA 286
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 287 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNG 346
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 347 SITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 406
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FER F+AQG
Sbjct: 407 GEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQG 466
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
YE+R++ ETLD+GW+LL I P+ LKR+ + + +++P+
Sbjct: 467 PYENRTVYETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPR 506
>pir||JC4198 adenosinetriphosphatase (EC 3.6.1.3) B chain - chicken
Length = 503
Score = 582 bits (1485), Expect = e-165
Identities = 278/460 (60%), Positives = 355/460 (76%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK Y E+V + G +R GQVL+ + A+VQVFEGT +D
Sbjct: 38 YKTVSGVNGPLVILDQVKFPRYAEIVHLTLPDGTRRSGQVLEVSGSKAVVQVFEGTSGID 97
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K TS FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R YP
Sbjct: 98 AKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPAVLAEDFLDIMGQPINPQCRIYP 157
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + EE+
Sbjct: 158 EEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVMDYSEEN 217
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FEE G+++ LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 218 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLA 277
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 278 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNG 337
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 338 SITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 397
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+AQG
Sbjct: 398 GEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFIAQG 457
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
YE+R++ ETLD+GW+LL I P+ LKR+ + + +++P+
Sbjct: 458 PYENRTVYETLDIGWQLLRIFPKEMLKRIPQTTLAEFYPR 497
>gb|AAD55091.1|AF179250_1 (AF179250) vacuolar-type H+ transporting ATPase B1 subunit
[Anguilla anguilla]
Length = 503
Score = 582 bits (1485), Expect = e-165
Identities = 277/460 (60%), Positives = 355/460 (76%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
YST+S + GPL+I++ VK Y E+V + G KR GQVL+ + A+VQVFEGT +D
Sbjct: 38 YSTVSGVNGPLVILDNVKFPRYAEIVHLTLPDGTKRSGQVLEVIGSKAVVQVFEGTSGID 97
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K T+ FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R YP
Sbjct: 98 AKKTACEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPMVLAEDYLDIMGQPINPQCRIYP 157
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEE--------ES 179
+ IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + E+
Sbjct: 158 EEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVQKSKDVMDYSSEN 217
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FEE G+++ LFLNLA+DP IERIITPR+ALT AEYLA
Sbjct: 218 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEYLA 277
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 278 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNG 337
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQ+ + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 338 SITQIPILTMPNDDITHPIPDLTGYITEGQVYVDRQLHNRQIYPPINVLPSLSRLMKSAI 397
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+AQG
Sbjct: 398 GEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFIAQG 457
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
Y++R++ ETLD+GW+LL I P+ LKR+ + + +++P+
Sbjct: 458 PYDNRTVYETLDIGWQLLRIFPKEMLKRIPQSTLAEFYPR 497
>pir||T05679 H+-transporting ATP synthase (EC 3.6.1.34) 54K chain - Arabidopsis
thaliana >gi|4467138|emb|CAB37507.1| (AL035540) probable
H+-transporting ATPase [Arabidopsis thaliana]
>gi|7270834|emb|CAB80515.1| (AL161593) probable
H+-transporting ATPase [Arabidopsis thaliana]
Length = 487
Score = 582 bits (1485), Expect = e-165
Identities = 286/470 (60%), Positives = 357/470 (75%), Gaps = 12/470 (2%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFE 61
+E+ EY T+S + GPL+I+E VKG Y E+V I G R+GQVL+ A+VQVFE
Sbjct: 14 LEIGMEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFE 73
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
GT +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP
Sbjct: 74 GTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINP 133
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLG------ 175
R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++
Sbjct: 134 SERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSD 193
Query: 176 ------EEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPR 229
E+++FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR
Sbjct: 194 NLLEHQEDDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPR 253
Query: 230 MALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYE 289
+ALT AEYLA++ VLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLATIYE
Sbjct: 254 IALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYE 313
Query: 290 RAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLP 349
RAGRI G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+LH + IYPPI+VLP
Sbjct: 314 RAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLP 373
Query: 350 SLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFAD 409
SLSRLMK IG+G TR DH ++ QLYA YA G+ ++ + AVVGEEALS D YLEF D
Sbjct: 374 SLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLD 433
Query: 410 RFEREFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
+FER+FVAQG Y+ R+I ++LDL W LL I P L R+ + + +++ +
Sbjct: 434 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSR 483
>gb|AAF73735.1|U61724_1 (U61724) vacuolar H-ATPase B subunit osteoclast isozyme [Gallus
gallus]
Length = 496
Score = 582 bits (1485), Expect = e-165
Identities = 278/460 (60%), Positives = 355/460 (76%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK Y E+V + G +R GQVL+ + A+VQVFEGT +D
Sbjct: 31 YKTVSGVNGPLVILDQVKFPRYAEIVHLTLPDGTRRSGQVLEVSGSKAVVQVFEGTSGID 90
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K TS FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R YP
Sbjct: 91 AKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPAVLAEDFLDIMGQPINPQCRIYP 150
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + EE+
Sbjct: 151 EEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVMDYSEEN 210
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FEE G+++ LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 211 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLA 270
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 271 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNG 330
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 331 SITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 390
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+AQG
Sbjct: 391 GEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFIAQG 450
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
YE+R++ ETLD+GW+LL I P+ LKR+ + + +++P+
Sbjct: 451 PYENRTVYETLDIGWQLLRIFPKEMLKRIPQTTLAEFYPR 490
>emb|CAA73182.1| (Y12634) vacuolar adenosine triphosphatase subunit B [Mus musculus]
>gi|2058354|emb|CAA73183.1| (Y12635) vacuolar adenosine
triphosphatase subunit B [Rattus norvegicus]
Length = 511
Score = 582 bits (1484), Expect = e-165
Identities = 278/460 (60%), Positives = 354/460 (76%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK Y E+V + G KR GQVL+ + A+VQVFEGT +D
Sbjct: 47 YKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGID 106
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K TS FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R YP
Sbjct: 107 AKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYP 166
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + EE+
Sbjct: 167 EEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEEN 226
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FEE G+++ LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 227 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLA 286
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 287 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNG 346
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 347 SITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 406
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+ QG
Sbjct: 407 GEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFITQG 466
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
YE+R++ ETLD+GW+LL I P+ LKR+ + + +++P+
Sbjct: 467 PYENRTVYETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPR 506
>gb|AAA58661.1| (L35249) vacuolar H+-ATPase 56,000 subunit [Homo sapiens]
Length = 511
Score = 582 bits (1483), Expect = e-165
Identities = 279/460 (60%), Positives = 354/460 (76%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK Y E+V + G KR GQVL+ + A+VQVFEGT +D
Sbjct: 47 YKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGID 106
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K TS FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R YP
Sbjct: 107 AKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYP 166
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + EE+
Sbjct: 167 EEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEEN 226
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FEE G+++ LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 227 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLA 286
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 287 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNG 346
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEG I + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 347 SITQIPILTMPNDDITHPIPDLTGYITEGLIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 406
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FER F+AQG
Sbjct: 407 GEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQG 466
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
YE+R++ ETLD+GW+LL I P+ LKR+ + + +++P+
Sbjct: 467 PYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPR 506
>sp|Q43432|VAT1_GOSHI VACUOLAR ATP SYNTHASE SUBUNIT B ISOFORM 1 (V-ATPASE B SUBUNIT)
>gi|459198|gb|AAA57549.1| (U07052) vacuolar H+-ATPase
subunit B [Gossypium hirsutum]
Length = 488
Score = 582 bits (1483), Expect = e-165
Identities = 289/476 (60%), Positives = 356/476 (74%), Gaps = 16/476 (3%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFE 61
+E+ EY T+S + GPL+I++ VKG Y E+V I G R+GQVL+ A+VQVFE
Sbjct: 15 LEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFE 74
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
GT +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP
Sbjct: 75 GTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINP 134
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------- 174
R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++
Sbjct: 135 SERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTG 194
Query: 175 -----GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPR 229
GEE++FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR
Sbjct: 195 DLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPR 254
Query: 230 MALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYE 289
+ALT AEYLA++ VLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLATIYE
Sbjct: 255 IALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYE 314
Query: 290 RAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLP 349
RAGRI G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+LH + IYPPI+VLP
Sbjct: 315 RAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLP 374
Query: 350 SLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFAD 409
SLSRLMK IG+G TR DH ++ QLYA YA G+ ++ + AVVGEEALS D YLEF D
Sbjct: 375 SLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLD 434
Query: 410 RFEREFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRKRSS 465
+FER+ V QG Y+ R+I ++LDL W LL I P L R+ K H +Y R +
Sbjct: 435 KFERKVVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIP----AKTHDQYYSRDA 486
>sp|Q40078|VAT1_HORVU VACUOLAR ATP SYNTHASE SUBUNIT B ISOFORM 1 (V-ATPASE B SUBUNIT)
>gi|167108|gb|AAA81330.1| (L11862) vacuolar ATPase B
subunit [Hordeum vulgare]
Length = 488
Score = 581 bits (1482), Expect = e-165
Identities = 285/470 (60%), Positives = 356/470 (75%), Gaps = 12/470 (2%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFE 61
+E+ EY T+S + GPL+I++ VKG Y E+V I G R+GQVL+ A+VQVFE
Sbjct: 15 LEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFE 74
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
GT +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP
Sbjct: 75 GTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINP 134
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------- 174
R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++
Sbjct: 135 SERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKGK 194
Query: 175 -----GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPR 229
GE+++FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR
Sbjct: 195 HAEGGGEDDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPR 254
Query: 230 MALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYE 289
+ALT AEYLA++ VLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLATIYE
Sbjct: 255 IALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYE 314
Query: 290 RAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLP 349
RAGRI G+ GSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+LH + IYPPI+VLP
Sbjct: 315 RAGRIEGRTGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLP 374
Query: 350 SLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFAD 409
SLSRLMK IG+G TR DH ++ QLYA YA G+ ++ + AVVGEEALS D YLEF D
Sbjct: 375 SLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLD 434
Query: 410 RFEREFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
+FER+FVAQG Y+ R+I ++LDL W LL I P L R+ + + ++ +
Sbjct: 435 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 484
>gb|AAA30400.1| (M88690) vacuolar H+-ATPase [Bos taurus]
Length = 510
Score = 581 bits (1481), Expect = e-165
Identities = 278/460 (60%), Positives = 354/460 (76%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK Y E+V + G KR GQVL+ + A+VQVFEGT +D
Sbjct: 46 YKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGID 105
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K TS FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R YP
Sbjct: 106 AKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPHFRIYP 165
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + EE+
Sbjct: 166 EEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEEN 225
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FEE G+++ LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 226 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLA 285
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 286 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNG 345
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 346 SITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 405
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+ QG
Sbjct: 406 GEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFITQG 465
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
YE+R++ ETLD+GW+LL I P+ LKR+ + + +++P+
Sbjct: 466 PYENRTVYETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPR 505
>sp|Q19626|VATB_CAEEL PROBABLE VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B SUBUNIT)
>gi|7499472|pir||T34226 hypothetical protein F20B6.2 -
Caenorhabditis elegans >gi|1086645|gb|AAA82311.1|
(U41015) Similar to vacuolar ATP synthase (strong).
[Caenorhabditis elegans]
Length = 491
Score = 581 bits (1481), Expect = e-165
Identities = 280/458 (61%), Positives = 352/458 (76%), Gaps = 6/458 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+ + GPL+I+ VK + E+V+I G KR GQVL+ +N A+VQVFEGT +D
Sbjct: 29 YQTVCGVNGPLVILNDVKFPQFSEIVKITLPDGSKRSGQVLEISKNKAVVQVFEGTSGID 88
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K T FTG+ L+ PVS DMLGRIFNG GKPID GP ++ ED D++G P+NP +R YP
Sbjct: 89 AKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAEDFLDINGQPINPWSRIYP 148
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLG------EEESFA 181
+ IQTGISAID MN++ RGQK+PIFS SGLPHN++AAQI RQ ++ E+ +FA
Sbjct: 149 EEMIQTGISAIDVMNSIARGQKIPIFSASGLPHNEIAAQIVRQGGLVQLPDRPHEQTNFA 208
Query: 182 VVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFD 241
+VFAAMG+ E A FFK+ FEE G++E LFLNLA+DP IERIITPR+ALT AE+LA+
Sbjct: 209 IVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRIALTSAEFLAYQ 268
Query: 242 YDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSI 301
VLV+LTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ GSI
Sbjct: 269 CKKHVLVVLTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRDGSI 328
Query: 302 TQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGK 361
TQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK IG+
Sbjct: 329 TQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSLSRLMKSAIGE 388
Query: 362 GRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
G TREDH ++ QLYA YA G+ ++ + AVVGEEALS D YLEF +FE+ F+ QG+Y
Sbjct: 389 GMTREDHSDVSNQLYACYAIGKDVQAMKAVVGEEALSSDDLLYLEFLTKFEKNFITQGHY 448
Query: 422 EDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
E+RS+ E+LD+GW+LL I P LKR+ + + KY+P+
Sbjct: 449 ENRSVFESLDIGWQLLRIFPREMLKRIPESTLEKYYPR 486
>pir||T43789 H+-transporting ATP synthase (EC 3.6.1.34) chain B, vacuolar
[imported] - Citrus unshiu >gi|4519264|dbj|BAA75517.1|
(AB024277) vacuolar H+-ATPase B subunit [Citrus unshiu]
Length = 488
Score = 580 bits (1480), Expect = e-165
Identities = 285/470 (60%), Positives = 357/470 (75%), Gaps = 12/470 (2%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFE 61
+E++ EY T++ + GPL+I++ VKG Y E+V I G R+GQVL+ A+VQVFE
Sbjct: 15 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFE 74
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
GT +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP
Sbjct: 75 GTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINP 134
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------- 174
R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++
Sbjct: 135 SERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTD 194
Query: 175 -----GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPR 229
GEE++FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR
Sbjct: 195 NLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPR 254
Query: 230 MALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYE 289
+ALT AEYLA++ VLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLA IYE
Sbjct: 255 IALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYE 314
Query: 290 RAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLP 349
RAGRI G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+L + IYPPI+VLP
Sbjct: 315 RAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLP 374
Query: 350 SLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFAD 409
SLSRLMK IG+G TR DH ++ QLYA YA G+ ++ + AVVGEEALS D YLEF D
Sbjct: 375 SLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLD 434
Query: 410 RFEREFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
+FER+FVAQG Y+ R+I ++LDL W LL I P L R+ + + +Y+ +
Sbjct: 435 KFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSR 484
>sp|P22550|VATB_CANTR VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE 57 KD SUBUNIT)
>gi|102004|pir||S13080 H+-transporting ATPase (EC
3.6.1.35) chain B, vacuolar - yeast (Candida tropicalis)
>gi|2654|emb|CAA38656.1| (X54875) vacuolar ATPase
subunit b [Candida tropicalis]
Length = 511
Score = 580 bits (1479), Expect = e-164
Identities = 279/464 (60%), Positives = 358/464 (77%), Gaps = 8/464 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y+ + + GPL+I++ VK Y E+V + G R+GQVL+ R AIVQVFEGT +D
Sbjct: 28 YTPVGGVNGPLVILDNVKFPRYNEIVNLTLPDGTVRQGQVLEVRGTKAIVQVFEGTSGID 87
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
VK T V FTGE LK+PVS DMLGRIF+G G+PID GP+I ED D++G+P+NP AR YP
Sbjct: 88 VKKTRVEFTGENLKIPVSEDMLGRIFDGSGRPIDKGPKIFAEDYLDINGSPINPYARIYP 147
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL--------GEEES 179
+ I TG+SAID MN++ RGQK+PIFS SGLPHN++AAQI RQA ++ G EE+
Sbjct: 148 EEMISTGVSAIDTMNSIARGQKIPIFSASGLPHNEIAAQICRQAGLVRPTKDVHDGHEEN 207
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
F++VFAAMG+ E + FFK+ FEE G++ER LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 208 FSIVFAAMGVNLETSRFFKQDFEENGSLERTTLFLNLANDPTIERIITPRLALTTAEFLA 267
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VL ILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDL+TIYERAGR+ G+ G
Sbjct: 268 YQTERHVLTILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVEGRNG 327
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH +GIYPPI+VLPSLSRLMK I
Sbjct: 328 SITQVPILTMPNDDITHPIPDLTGYITEGQIFIDRQLHNRGIYPPINVLPSLSRLMKSAI 387
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ + AVVGEEALS DK LEF ++FE+ F++QG
Sbjct: 388 GEGMTRKDHGDVSNQLYAKYAIGKDAAAMKAVVGEEALSTEDKLSLEFLEKFEKNFISQG 447
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRKR 463
YE+R+I E+LDL W LL I P+ L R+ +++ +++ + R++
Sbjct: 448 AYENRTIFESLDLAWSLLRIYPKEMLNRISPKILEEFYGRDREQ 491
>gb|AAD33861.1| (AF140022) V-type ATPase B subunit [Oncorhynchus mykiss]
Length = 502
Score = 580 bits (1479), Expect = e-164
Identities = 275/460 (59%), Positives = 355/460 (76%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
YST+S + GPL+I++ VK Y E+V + G +R GQVL+ A+VQVFEGT +D
Sbjct: 37 YSTVSGVNGPLVILDNVKFPRYAEIVHLTLPDGTRRSGQVLEVIGTKAVVQVFEGTSGID 96
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K T+ FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R YP
Sbjct: 97 AKKTACEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPTVLAEDYLDIMGQPINPQCRIYP 156
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + +++
Sbjct: 157 EEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVMDYSDDN 216
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FEE G+++ LFLNLA+DP IERIITPR+ALT AEYLA
Sbjct: 217 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTSAEYLA 276
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 277 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNG 336
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQ+ + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 337 SITQIPILTMPNDDITHPIPDLTGYITEGQVYVDRQLHNRQIYPPINVLPSLSRLMKSAI 396
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+AQG
Sbjct: 397 GEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFIAQG 456
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
Y++R++ ETLD+GW+LL I P+ LKR+ + + +++P+
Sbjct: 457 PYDNRTVYETLDIGWQLLRIFPKEMLKRIPQSTLAEFYPR 496
>gb|AAC78641.1| (AF099743) vacuolar-type H+ transporting ATPase B2 subunit
[Anguilla anguilla]
Length = 511
Score = 580 bits (1478), Expect = e-164
Identities = 277/463 (59%), Positives = 355/463 (75%), Gaps = 8/463 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK Y E+V + G KR GQVL+ + A+VQVFEGT +D
Sbjct: 48 YKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGID 107
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
+ TS FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R YP
Sbjct: 108 AQKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPMVLAEDYLDIMGQPINPQCRIYP 167
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEE--------ES 179
+ IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + ++
Sbjct: 168 EEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVMDYSADN 227
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FEE G+++ LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 228 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLA 287
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 288 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNG 347
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 348 SITQIPILTMPNDDITHPIPDLTGYITEGQIYVERQLHNRQIYPPINVLPSLSRLMKSAI 407
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+AQG
Sbjct: 408 GEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFIAQG 467
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRK 462
YE+R++ ETLD+GW+LL I P+ LKR+ + + +++P+ K
Sbjct: 468 AYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLAEFYPRDSK 510
>sp|P11574|VATB_ARATH VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B SUBUNIT) (V-ATPASE 57
KD SUBUNIT) >gi|81637|pir||A31886 H+-transporting ATPase
(EC 3.6.1.35) 57K chain - Arabidopsis thaliana
>gi|166627|gb|AAC36485.1| (J04185) nucleotide-binding
subunit of vacuolar ATPase [Arabidopsis thaliana]
Length = 492
Score = 579 bits (1477), Expect = e-164
Identities = 284/470 (60%), Positives = 356/470 (75%), Gaps = 12/470 (2%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFE 61
+E+ EY T+S + GPL+I++ VKG Y E+V I G R+GQVL+ A+VQVFE
Sbjct: 19 LEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFE 78
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
GT +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP
Sbjct: 79 GTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINP 138
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE----- 176
R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++
Sbjct: 139 SERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTV 198
Query: 177 -------EESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPR 229
E++FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR
Sbjct: 199 DLLEDHGEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPR 258
Query: 230 MALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYE 289
+ALT AEYLA++ VLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLATIYE
Sbjct: 259 IALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYE 318
Query: 290 RAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLP 349
RAGRI G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+LH + IYPPI+VLP
Sbjct: 319 RAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLP 378
Query: 350 SLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFAD 409
SLSRLMK IG+G TR+DH ++ QLYA YA G+ ++ + AVVGEEALS D YLEF D
Sbjct: 379 SLSRLMKSAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLD 438
Query: 410 RFEREFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
+FER+FV QG Y+ R+I ++LDL W LL I P L R+ + + +++ +
Sbjct: 439 KFERKFVMQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSR 488
>dbj|BAA36692.1| (AB016484) vacuolar-type H+-ATPase subunit B [Ascidia sydneiensis
samea]
Length = 509
Score = 578 bits (1473), Expect = e-164
Identities = 276/467 (59%), Positives = 358/467 (76%), Gaps = 9/467 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I+E VK + E+V + G +R GQVL+ + A+VQVFEGT +D
Sbjct: 32 YQTVSGVNGPLVILEKVKFAKFAEIVTLNLADGTQRSGQVLEVSGDKAVVQVFEGTSGID 91
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K T+ FTG+ L++P S DMLGRIFNG GKPID GP ++PED D+ G P+NP +R YP
Sbjct: 92 AKHTTCEFTGDILRIPTSEDMLGRIFNGSGKPIDKGPSVLPEDYLDIQGQPINPKSRIYP 151
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL---------GEEE 178
+ IQTGISAID MN++ RGQK+PIFS +GLPHN++AAQI RQ ++ E+
Sbjct: 152 EEMIQTGISAIDTMNSIARGQKIPIFSANGLPHNEIAAQICRQGGLVKLPDKDVMDSHED 211
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
+FA+VFAAMG+ E A FFK FE+ G+++ LFLNLA+DP IERIITPR+ALT AE+L
Sbjct: 212 NFAIVFAAMGVNMEAARFFKSDFEQHGSMDNVCLFLNLANDPTIERIITPRIALTTAEFL 271
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK 298
A+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+
Sbjct: 272 AYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVNGRN 331
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK
Sbjct: 332 GSITQIPILTMPNDDITHPIPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSA 391
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
IG+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+AQ
Sbjct: 392 IGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALTADDMLYLEFLGKFEKTFIAQ 451
Query: 419 GYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRKRSS 465
G YE+RS+ ++L++GWELL I P+ LKR+ + +I +Y+P+ + S+
Sbjct: 452 GPYENRSVFDSLNIGWELLRIFPKEMLKRIPRNVINEYYPRKKVPSA 498
>sp|P48413|VATB_CYACA VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B SUBUNIT)
>gi|7436110|pir||T14363 probable H+-transporting ATPase
(EC 3.6.1.35) chain B, vacuolar - red alga (Cyanidium
caldarium) >gi|576661|gb|AAA85821.1| (U17101) V-ATPase B
subunit [Cyanidium caldarium]
Length = 500
Score = 576 bits (1469), Expect = e-163
Identities = 278/461 (60%), Positives = 351/461 (75%), Gaps = 10/461 (2%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDL 66
EY T+S + GPL+I++ VK + E+V + G R+GQVL+ ++ A+VQ+FEGT +
Sbjct: 22 EYRTVSAVNGPLIILQNVKSPRFAEIVNVTLGDGSVRRGQVLEINQDKAVVQIFEGTTGI 81
Query: 67 DVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
D K T +FTGE LK PVS+DMLGR+FNG GKPIDGGP I+PE D+ G P+NP +R Y
Sbjct: 82 DNKKTVCQFTGEILKTPVSLDMLGRVFNGSGKPIDGGPPILPEAYLDIQGQPINPQSRTY 141
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLG----------E 176
P + +TGIS+ID MN++ RGQK+P+FSG+GLPHN++AAQI RQ ++ +
Sbjct: 142 PEEMFETGISSIDVMNSIARGQKIPLFSGAGLPHNEVAAQICRQVCLVSTCTLVKRSGKD 201
Query: 177 EESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAE 236
EE FA+VFAAMG+ E A FF++ FEE GA+ER LFLNLA+DP IERIITPR+ALT AE
Sbjct: 202 EEDFAIVFAAMGVNMETARFFRQDFEENGAMERVTLFLNLANDPTIERIITPRLALTFAE 261
Query: 237 YLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRG 296
YLA++ VLVILTDM+ Y +ALRE+SAAREEVPGRRGYPGYMYTDLATIYERAGR+ G
Sbjct: 262 YLAYEKGKHVLVILTDMSAYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRVEG 321
Query: 297 KKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMK 356
+ GSITQ+PILTMP+DDITHPIPDLTGYITE QI L R+LH + IYPPI+VLPSLSRLMK
Sbjct: 322 RPGSITQLPILTMPNDDITHPIPDLTGYITEEQIYLDRQLHNRQIYPPINVLPSLSRLMK 381
Query: 357 DGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFV 416
IG+G TR+DH ++ QLYAAYA G+ + AVVG EALS+ D YLEF D+FER FV
Sbjct: 382 SAIGEGMTRKDHSDVSNQLYAAYAMGKDALAMRAVVGVEALSQEDLLYLEFHDKFERRFV 441
Query: 417 AQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYH 457
QG YE R I +LD+ W+LL I P L+R+ ++++ +Y+
Sbjct: 442 NQGAYERRDIYTSLDMAWDLLRIFPVQMLRRIPEKILQEYY 482
>sp|Q38681|VAB1_ACEAT VACUOLAR ATP SYNTHASE SUBUNIT B ISOFORM 1 (V-ATPASE B SUBUNIT)
>gi|1303677|dbj|BAA09099.1| (D50530) adenosine
triphosphatase B subunit [Acetabularia acetabulum]
Length = 492
Score = 575 bits (1466), Expect = e-163
Identities = 279/465 (60%), Positives = 355/465 (76%), Gaps = 12/465 (2%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDL 66
EY T+ + GPL++VE VK + E+V I +G R+GQVL+ N A+VQVFEGT +
Sbjct: 25 EYRTVGGVSGPLVVVELVKRPKFAEIVNIRLGNGTSRRGQVLEVDGNRAVVQVFEGTSGI 84
Query: 67 DVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
D + T+++FTGE L PVS DMLGR+FNG GKPIDGGP ++ E D+ G+ +NP R Y
Sbjct: 85 DNRNTTLQFTGEVLSTPVSKDMLGRVFNGSGKPIDGGPPVLAEAYLDIQGSSINPSERTY 144
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLG----------- 175
P + IQTG+S ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++
Sbjct: 145 PEEMIQTGVSTIDVMNSIARGQKIPLFSAAGLPHNDIAAQICRQAGLVKRGNQDSMIDAG 204
Query: 176 -EEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTV 234
EEE FA+VFAAMG+ E A++FK+ FEE G++E+ VLFLNLA+DP IERIITPR+ALT
Sbjct: 205 HEEEEFAIVFAAMGVNMETAHYFKQDFEENGSMEKTVLFLNLANDPTIERIITPRIALTT 264
Query: 235 AEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRI 294
AEYLA++ VLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLATIYERAGRI
Sbjct: 265 AEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRI 324
Query: 295 RGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354
G+KGSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRL
Sbjct: 325 EGRKGSITQLPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRL 384
Query: 355 MKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFERE 414
MK IG+G TR+DH +++ QLYA YA G+ + + AVVGEEALS D YLEF D+FER+
Sbjct: 385 MKSAIGEGMTRKDHSEVSNQLYANYAIGKDVAAMKAVVGEEALSSEDLLYLEFLDKFERK 444
Query: 415 FVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
FV QG+YE R+I ++LDL W LL + P+ L+R+ + + K + +
Sbjct: 445 FVNQGHYEARTIFDSLDLAWTLLRLFPKELLRRITAKTLEKMYER 489
>gb|AAF60418.1| (AC006708) contains similarity to Pfam families PF00006 (synthase
alpha and beta subunits, score=461.2, E=8.4e-135, N=1)
and PF01038 (synthase beta chain, carboxyl terminus,
score=224.9, E=1.1e-63, N=1) [Caenorhabditis elegans]
Length = 501
Score = 575 bits (1465), Expect = e-163
Identities = 276/461 (59%), Positives = 357/461 (76%), Gaps = 6/461 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+ + GPL+IV VK + E+V+I +G+ R GQVL++ +N A+VQVFEGT +D
Sbjct: 41 YQTVFGVNGPLVIVHNVKFPMFNEIVKITLPNGQIRMGQVLESSKNKAVVQVFEGTTGVD 100
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K T+ FTG+ + PVS+DMLGRIFNG GKPID GP ++PED D++G P+NP R YP
Sbjct: 101 AKFTTCEFTGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYP 160
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------GEEESFA 181
+ IQTGISAID MN++ RGQK+PIFS +GLPHN++AAQI RQ ++ E +FA
Sbjct: 161 EEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQIVRQGGLVQLPGRNNETVNFA 220
Query: 182 VVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFD 241
+VFAAMG+ E A FFK+ FEE G+++ LFLNLA+DP IERIITPR+ALT AE+ A+
Sbjct: 221 IVFAAMGVNMETARFFKQDFEECGSMDNVCLFLNLANDPTIERIITPRIALTAAEFFAYH 280
Query: 242 YDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSI 301
VLV+LTDM++Y EALREISAAREEVPGRRG+PGYMYTDLATIYERAGR++G++GSI
Sbjct: 281 CGKHVLVVLTDMSSYAEALREISAAREEVPGRRGFPGYMYTDLATIYERAGRVKGREGSI 340
Query: 302 TQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGK 361
TQ+PILTMP++DITHPIPDLTGYITEGQI + ++LH++ IYPPIDVLPSLSRLMK +G+
Sbjct: 341 TQIPILTMPNNDITHPIPDLTGYITEGQIYIDKQLHKRLIYPPIDVLPSLSRLMKSAVGE 400
Query: 362 GRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
G TREDH L+ QLYA YA G+ ++ + AVVG EALS D YLEF +FE+ F+AQG Y
Sbjct: 401 GMTREDHSDLSNQLYACYAMGKDVQAMKAVVGVEALSPDDLLYLEFLAKFEKNFIAQGRY 460
Query: 422 EDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYRK 462
E+R+I E+L++GWELL I P LKR+ + ++ KY+ + ++
Sbjct: 461 ENRTIVESLNIGWELLRIFPREMLKRIPETLLEKYYKRKKQ 501
>sp|P31401|VATB_MANSE VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B SUBUNIT)
>gi|345455|pir||S24387 H+-transporting ATPase (EC
3.6.1.35) chain B, vacuolar - tobacco hornworm
>gi|9714|emb|CAA45706.1| (X64354) H(+)-transporting
ATPase [Manduca sexta]
Length = 494
Score = 574 bits (1463), Expect = e-163
Identities = 275/461 (59%), Positives = 356/461 (76%), Gaps = 9/461 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK + E+V+++ G R GQVL+ + A+VQVFEGT +D
Sbjct: 30 YKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTHRSGQVLEVSGSKAVVQVFEGTSGID 89
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K T FTG+ L+ PVS DMLGR+FNG GKPID GP I+ ED D+ G P+NP +R YP
Sbjct: 90 AKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPINPWSRIYP 149
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQA---KVLGE------EE 178
+ IQTGISAID MN++ RGQK+PIFS +GLPHN++AAQI RQA K+ G+ E+
Sbjct: 150 EEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKIPGKSVLDDHED 209
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
+FA+VFAAMG+ E A FFK+ FEE G++E LFLNLA+DP IERIITPR+ALT AE+L
Sbjct: 210 NFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFL 269
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK 298
A+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+
Sbjct: 270 AYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRN 329
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPP++VLPSLSRLMK
Sbjct: 330 GSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 389
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
IG+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+ Q
Sbjct: 390 IGEGMTRKDHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFITQ 449
Query: 419 GYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
G YE+R++ E+LD+GW+LL I P+ LKR+ ++ +++P+
Sbjct: 450 GNYENRTVFESLDIGWQLLRIFPKEMLKRIPASILAEFYPR 490
>sp|P11593|VATB_NEUCR VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE 57 KD SUBUNIT)
>gi|83766|pir||A30800 H+-transporting ATPase (EC
3.6.1.35) 57K chain, vacuolar - Neurospora crassa
>gi|168928|gb|AAA33622.1| (J03956) vacuolar ATPase vma-2
[Neurospora crassa]
Length = 513
Score = 574 bits (1463), Expect = e-163
Identities = 279/464 (60%), Positives = 355/464 (76%), Gaps = 12/464 (2%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y+T+ + GPL+I++ VK Y E+V + G +R GQVL+AR N A+VQVFEGT +D
Sbjct: 18 YNTVGGVNGPLVILDNVKFPRYNEIVTLTLPDGTQRSGQVLEARGNRAVVQVFEGTSGID 77
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
VK T V FTGE+LK+ VS DMLGRIF+G G+ ID GP+++ E+ D++G+P+NP AR YP
Sbjct: 78 VKKTKVEFTGESLKLGVSEDMLGRIFDGSGRAIDKGPKVLAEEYLDINGSPINPYAREYP 137
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------------G 175
++ I TGISAID MN++ RGQK+PIFS +GLPHN++AAQI RQA ++ G
Sbjct: 138 QEMISTGISAIDTMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVQRQGITNKGVHDG 197
Query: 176 EEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVA 235
EE+F++VF AMG+ E A FF + FEE G++ R LFLNLA+DP IERIITPR+ALT A
Sbjct: 198 HEENFSIVFGAMGVNLETARFFTRDFEENGSLGRTTLFLNLANDPTIERIITPRLALTTA 257
Query: 236 EYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIR 295
EY A+ + VLVILTD+++YC+ALRE+SAAREEVPGRRG+PGYMYTDL+TIYERAGR+
Sbjct: 258 EYYAYQLEKHVLVILTDLSSYCDALREVSAAREEVPGRRGFPGYMYTDLSTIYERAGRVA 317
Query: 296 GKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLM 355
G+ GSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R LH +GIYPPI+VLPSLSRLM
Sbjct: 318 GRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRGLHNRGIYPPINVLPSLSRLM 377
Query: 356 KDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREF 415
K IG+G TR+DH ++ QLYA YA GR + AVVGEEALS DK LEF D+FER F
Sbjct: 378 KSAIGEGMTRKDHGDVSNQLYAKYAIGRDAAAMKAVVGEEALSNEDKLSLEFLDKFERSF 437
Query: 416 VAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
+AQG YE R+I E+LDL W LL I + L R+ K++I +++ +
Sbjct: 438 IAQGPYESRTIFESLDLAWSLLRIYRKDMLNRIPKKIIDEFYSR 481
>gb|AAC04806.1| (AF037468) B subunit V-ATPase [Culex pipiens quinquefasciatus]
Length = 492
Score = 574 bits (1463), Expect = e-163
Identities = 274/461 (59%), Positives = 354/461 (76%), Gaps = 9/461 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK + E+V++ G R GQVL+ + A+VQVFEGT +D
Sbjct: 28 YKTVSGVNGPLVILDEVKFPKFAEIVQLRLADGTIRSGQVLEVSGSKAVVQVFEGTSGID 87
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K T FTG+ L+ PVS DMLGR+FNG GKPID GP I+ ED D+ G P+NP +R YP
Sbjct: 88 AKNTVCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPINPWSRIYP 147
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL---------GEEE 178
+ IQTGISAID MN++ RGQK+PIFS +GLPHN++AAQI RQA ++ EE
Sbjct: 148 EEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKHTGKSVLDDHEE 207
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
+FA+VFAAMG+ E A FFK+ FEE G++E LFLNLA+DP IERIITPR+ALT AE+L
Sbjct: 208 NFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFL 267
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK 298
A+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+
Sbjct: 268 AYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRN 327
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPP++VLPSLSRLMK
Sbjct: 328 GSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 387
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
IG+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F++Q
Sbjct: 388 IGEGMTRKDHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLSKFEKNFISQ 447
Query: 419 GYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
G YE+R++ E+LD+GW+LL I P+ LKR+ ++ +++P+
Sbjct: 448 GNYENRTVFESLDIGWQLLRIFPKEMLKRIPASILAEFYPR 488
>gb|AAD27666.1|AF092934_1 (AF092934) vacuolar ATPase B subunit [Aedes aegypti]
Length = 496
Score = 574 bits (1463), Expect = e-163
Identities = 276/461 (59%), Positives = 355/461 (76%), Gaps = 9/461 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK + E+V++ G R GQVL+ + A+VQVFEGT +D
Sbjct: 32 YKTVSGVNGPLVILDEVKFPKFAEIVQLRLNDGTVRSGQVLEVSGSKAVVQVFEGTSGID 91
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K T FTG+ L+ PVS DMLGR+FNG GKPID GP I+ ED D+ G P+NP +R YP
Sbjct: 92 AKNTVCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPINPWSRIYP 151
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQA--------KVLGE-EE 178
+ IQTGISAID MN++ RGQK+PIFS +GLPHN++AAQI RQA VL E E+
Sbjct: 152 EEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKHTGKSVLDEHED 211
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
+FA+VFAAMG+ E A FFK+ FEE G++E LFLNLA+DP IERIITPR+ALT AE+L
Sbjct: 212 NFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFL 271
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK 298
A+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+
Sbjct: 272 AYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRN 331
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPP++VLPSLSRLMK
Sbjct: 332 GSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 391
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
IG+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F++Q
Sbjct: 392 IGEGMTRKDHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFISQ 451
Query: 419 GYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
G YE+R++ E+LD+GW+LL I P+ LKR+ ++ +++P+
Sbjct: 452 GNYENRTVFESLDIGWQLLRIFPKEMLKRIPASILAEFYPR 492
>pir||S25335 H+-transporting ATPase (EC 3.6.1.35) chain B, vacuolar - fission
yeast (Schizosaccharomyces pombe)
Length = 503
Score = 573 bits (1462), Expect = e-162
Identities = 271/461 (58%), Positives = 354/461 (76%), Gaps = 9/461 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y+T++ I GPL+I+E ++ Y E+V + G R GQVL+ + AIVQVFEGT +D
Sbjct: 24 YNTVNSITGPLVILENIRRPQYNEIVNLNLPDGSVRSGQVLEVAGHKAIVQVFEGTSGVD 83
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
V+ T++ FTG ++++PVS DMLGR+FNG G PID GP ++ ED D++G+P+NP AR YP
Sbjct: 84 VRKTTIDFTGHSMRIPVSEDMLGRVFNGSGLPIDKGPNLLAEDYLDINGSPINPYARIYP 143
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL---------GEEE 178
+ IQTGIS+IDG+N++ RGQK+PIFS +GLPHN++AAQI RQA ++ G E+
Sbjct: 144 EEMIQTGISSIDGLNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKRPTKDVHDGHED 203
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
+F++VFAAMG+ E A FF++ FEE G+ ER LFLNLA+DP IERIITPR+AL+ +E+L
Sbjct: 204 NFSIVFAAMGVNLETARFFQRDFEENGSFERVTLFLNLANDPTIERIITPRLALSASEFL 263
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK 298
A+ + VL ILTDMT+Y +ALRE+SAAREEVPGRRGYPGYMYTDL+TIYERAGR+ G+
Sbjct: 264 AYQTEKHVLTILTDMTSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVEGRN 323
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH IYPPI+VLPSLSRLMK
Sbjct: 324 GSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQLHNNAIYPPINVLPSLSRLMKSA 383
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
IG+G TR DH ++ QLYA YA GR + +VVGEEALS+ D+ LEF +FE+ F++Q
Sbjct: 384 IGEGMTRNDHGDVSNQLYAMYAIGRDAASMKSVVGEEALSQEDRLALEFLGKFEKTFISQ 443
Query: 419 GYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
G YE+R+I ETLDL W LL I P L R+ K+++ +Y+ +
Sbjct: 444 GAYENRTIFETLDLAWSLLRIFPREMLTRIPKKILDQYYSR 484
>sp|P31410|VATB_HELVI VACUOLAR ATP SYNTHASE SUBUNIT B >gi|102930|pir||S18395
H+-transporting ATPase (EC 3.6.1.35) chain B, vacuolar -
tobacco budworm >gi|237459|gb|AAB20098.1| (S61797)
vacuolar (V-type) H(+)-ATPase B subunit [Helicoverpa
virescens, midgut and Malpighian tubules, fifth instar
larvae, Peptide, 494 aa] [Heliothis virescens]
Length = 494
Score = 573 bits (1462), Expect = e-162
Identities = 275/461 (59%), Positives = 355/461 (76%), Gaps = 9/461 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK + E+V++ G R GQVL+ A+VQVFEGT +D
Sbjct: 30 YKTVSGVNGPLVILDDVKFPKFSEIVQLRLADGTLRSGQVLEVSGTKAVVQVFEGTSGID 89
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K T FTG+ L+ PVS DMLGR+FNG GKPID GP I+ ED D+ G P+NP +R YP
Sbjct: 90 AKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPINPWSRIYP 149
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQA---KVLGE------EE 178
+ IQTGISAID MN++ RGQK+PIFS +GLPHN++AAQI RQA K+ G+ E+
Sbjct: 150 EEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKIPGKSVLDDHED 209
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
+FA+VFAAMG+ E A FFK+ FEE G++E LFLNLA+DP IERIITPR+ALT AE+L
Sbjct: 210 NFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFL 269
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK 298
A+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+
Sbjct: 270 AYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRN 329
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPP++VLPSLSRLMK
Sbjct: 330 GSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 389
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
IG+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F++Q
Sbjct: 390 IGEGMTRKDHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFISQ 449
Query: 419 GYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
G YE+R++ E+LD+GW+LL I P+ LKR+ ++ +++P+
Sbjct: 450 GNYENRTVFESLDIGWQLLRIFPKEMLKRIPASILAEFYPR 490
>sp|P31411|VATB_SCHPO VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE 57 KDA SUBUNIT)
>gi|7493601|pir||T38997 vacuolar atp synthase subunit b
- fission yeast (Schizosaccharomyces pombe)
>gi|5140|emb|CAA49339.1| (X69638) vacuolar H+-ATPase
subunit B [Schizosaccharomyces pombe]
>gi|4056549|emb|CAA22584.1| (AL034583) vacuolar atp
synthase subunit b [Schizosaccharomyces pombe]
Length = 503
Score = 572 bits (1459), Expect = e-162
Identities = 270/461 (58%), Positives = 354/461 (76%), Gaps = 9/461 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y+T++ I GPL+I++ ++ Y E+V + G R GQVL+ + AIVQVFEGT +D
Sbjct: 24 YNTVNSITGPLVILDNIRRPQYNEIVNLNLPDGSVRSGQVLEVAGHKAIVQVFEGTSGVD 83
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
V+ T++ FTG ++++PVS DMLGR+FNG G PID GP ++ ED D++G+P+NP AR YP
Sbjct: 84 VRKTTIDFTGHSMRIPVSEDMLGRVFNGSGLPIDKGPNLLAEDYLDINGSPINPYARIYP 143
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL---------GEEE 178
+ IQTGIS+IDG+N++ RGQK+PIFS +GLPHN++AAQI RQA ++ G E+
Sbjct: 144 EEMIQTGISSIDGLNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKRPTKDVHDGHED 203
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
+F++VFAAMG+ E A FF++ FEE G+ ER LFLNLA+DP IERIITPR+AL+ +E+L
Sbjct: 204 NFSIVFAAMGVNLETARFFQRDFEENGSFERVTLFLNLANDPTIERIITPRLALSASEFL 263
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK 298
A+ + VL ILTDMT+Y +ALRE+SAAREEVPGRRGYPGYMYTDL+TIYERAGR+ G+
Sbjct: 264 AYQTEKHVLTILTDMTSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVEGRN 323
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH IYPPI+VLPSLSRLMK
Sbjct: 324 GSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQLHNNAIYPPINVLPSLSRLMKSA 383
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
IG+G TR DH ++ QLYA YA GR + +VVGEEALS+ D+ LEF +FE+ F++Q
Sbjct: 384 IGEGMTRNDHGDVSNQLYAMYAIGRDAASMKSVVGEEALSQEDRLALEFLGKFEKTFISQ 443
Query: 419 GYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
G YE+R+I ETLDL W LL I P L R+ K+++ +Y+ +
Sbjct: 444 GAYENRTIFETLDLAWSLLRIFPREMLTRIPKKILDQYYSR 484
>pir||B75488 v-type ATP synthase, B subunit - Deinococcus radiodurans (strain
R1) >gi|6458406|gb|AAF10279.1|AE001926_11 (AE001926)
v-type ATP synthase, B subunit [Deinococcus radiodurans]
Length = 471
Score = 571 bits (1456), Expect = e-162
Identities = 277/457 (60%), Positives = 353/457 (76%), Gaps = 1/457 (0%)
Query: 1 MMEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVF 60
M + KEY+ ++ I GPL+ V + G +V I+ +G+ R G+V+ + A++QVF
Sbjct: 1 MTLLQKEYNDVAYISGPLLFVNAASDLPNGAIVNIKDGNGKLRGGRVISVSDQNAVIQVF 60
Query: 61 EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120
E TR LD+ T SV + ++ VS +M+GR F+G+G+PIDG P ++ E R V G P+N
Sbjct: 61 EETRGLDLATASVSLVEDVARLGVSKEMIGRRFDGLGRPIDGLPAVVAEQRLSVDGQPMN 120
Query: 121 PVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF 180
P ARA P +FIQTGIS ID +L+RGQKLPIFSGSGLPHN+LAAQIARQAKV G E F
Sbjct: 121 PAARAKPEEFIQTGISTIDVQTSLIRGQKLPIFSGSGLPHNELAAQIARQAKVPGHEGDF 180
Query: 181 AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
AVVFAAMG+T E +FF + FE TGA+ R+VLFLN ADDPA+ER++TPRMALT AEYLAF
Sbjct: 181 AVVFAAMGLTQREVSFFTQEFERTGALARSVLFLNKADDPAVERLLTPRMALTTAEYLAF 240
Query: 241 DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGS 300
++ VLVILTD+TNYCEALREI AREE+PGRRG+PGYMYTDLA++YERAG + GK GS
Sbjct: 241 EHGYHVLVILTDLTNYCEALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVVEGKPGS 300
Query: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG 360
+TQ+PIL+MPDDDITHPIPDLTGYITEGQIV+ R L+ KG++PPI+ LPSLSRL +GIG
Sbjct: 301 VTQVPILSMPDDDITHPIPDLTGYITEGQIVVDRTLNSKGVFPPINPLPSLSRLQGNGIG 360
Query: 361 KGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
KG+TR DH +A QL+AAYA G LR LVA+ GE+AL+ETDK YL+F+D FE F+ QG
Sbjct: 361 KGKTRADHKNVADQLFAAYANGLDLRKLVAITGEDALTETDKLYLKFSDDFENYFIGQG- 419
Query: 421 YEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYH 457
+DRSI+++L + W +LS LP+S+L R+ K+ I KY+
Sbjct: 420 DQDRSIDDSLTVAWGILSKLPQSQLTRLSKDSIDKYY 456
>sp|P31409|VATB_DROME VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE 57 KDA SUBUNIT)
>gi|103448|pir||S25167 H+-transporting ATPase (EC
3.6.1.35) chain B, vacuolar - fruit fly (Drosophila
melanogaster) >gi|8810|emb|CAA48034.1| (X67839) vacuolar
ATPase B subunit [Drosophila melanogaster]
>gi|7299652|gb|AAF54836.1| (AE003696) Vha55 gene product
[alt 2] [Drosophila melanogaster]
>gi|7299653|gb|AAF54837.1| (AE003696) Vha55 gene product
[alt 1] [Drosophila melanogaster]
Length = 490
Score = 571 bits (1455), Expect = e-162
Identities = 274/461 (59%), Positives = 355/461 (76%), Gaps = 9/461 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK + E+V++ G R GQVL+ + A+VQVFEGT +D
Sbjct: 26 YKTVSGVNGPLVILDEVKFPKFAEIVQLRLADGTVRSGQVLEVSGSKAVVQVFEGTSGID 85
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K T FTG+ L+ PVS DMLGR+FNG GKPID GP I+ ED D+ G P+NP +R YP
Sbjct: 86 AKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPINPWSRIYP 145
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQA---KVLGEE------E 178
+ IQTGISAID MN++ RGQK+PIFS +GLPHN++AAQI RQA K+ G+ +
Sbjct: 146 EEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVLDDHTD 205
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
+FA+VFAAMG+ E A FFK+ FEE G++E LFLNLA+DP IERIITPR+ALT AE+L
Sbjct: 206 NFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFL 265
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK 298
A+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+
Sbjct: 266 AYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRN 325
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPP++VLPSLSRLMK
Sbjct: 326 GSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 385
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
IG+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F++Q
Sbjct: 386 IGEGMTRKDHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFISQ 445
Query: 419 GYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
G YE+R++ E+LD+GW+LL I P+ LKR+ ++ +++P+
Sbjct: 446 GNYENRTVFESLDIGWQLLRIFPKEMLKRIPASILAEFYPR 486
>gb|AAF08281.1|AF189779_1 (AF189779) vacuolar ATP synthase subunit B K form; v-ATPase subunit
B; v-type H+-ATPase subunit B [Carcinus maenas]
>gi|7677489|gb|AAF67183.1|AF247971_1 (AF247971) vacuolar
ATP synthase subunit B L form [Carcinus maenas]
Length = 489
Score = 568 bits (1447), Expect = e-161
Identities = 272/463 (58%), Positives = 352/463 (75%), Gaps = 9/463 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T++ + GPL+I++ VK + E+V + G +RKGQVL+ + A+VQVFEGT +D
Sbjct: 25 YKTVTGVNGPLVILDDVKFPKFAEIVNLHLADGTERKGQVLEVSGSKAVVQVFEGTSGVD 84
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K T FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP +R YP
Sbjct: 85 AKYTVCEFTGDILRTPVSEDMLGRVFNGSGKPIDQGPSVLAEDFLDIQGQPINPWSRTYP 144
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL---------GEEE 178
+ IQTGIS+ID MN++ RGQK+PIFS +GLPHN++AAQI RQA ++ ++
Sbjct: 145 EEMIQTGISSIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPSKGVHDDHKD 204
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
+FA+VFAAMG+ E A FFK+ FEE G++E LFLNLA+DP IERIITPR+ALT AEYL
Sbjct: 205 NFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTTAEYL 264
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK 298
A+ + VL+ILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G++
Sbjct: 265 AYQCEKHVLIILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRQ 324
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK
Sbjct: 325 GSITQIPILTMPNDDITHPIPDLTGYITEGQIYVERQLHNRQIYPPINVLPSLSRLMKSA 384
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
IG+G TR+DH + QLYA YA + L+ + AVVGEEAL+ D YLEF +FE+ F++Q
Sbjct: 385 IGEGMTRKDHSDVCNQLYACYAIAKDLQAMKAVVGEEALTADDLLYLEFLAKFEKSFISQ 444
Query: 419 GYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKYR 461
G Y R+I E+LD+GW+LL I P+ LKR+ + +++P+ R
Sbjct: 445 GSYMKRTIFESLDIGWQLLRIFPKEMLKRIPASTLAEFYPRDR 487
>sp|Q38680|VAB2_ACEAT VACUOLAR ATP SYNTHASE SUBUNIT B ISOFORM 2 (V-ATPASE B SUBUNIT)
>gi|1303675|dbj|BAA09100.1| (D50531) adenosine
triphosphatase B subunit [Acetabularia acetabulum]
Length = 492
Score = 567 bits (1446), Expect = e-161
Identities = 276/465 (59%), Positives = 352/465 (75%), Gaps = 12/465 (2%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDL 66
EY T+ + GPL++VE VK + E+V I +G R+GQVL+ N A+VQVFEGT +
Sbjct: 25 EYRTVGGVSGPLVVVELVKRPKFAEIVNIRLGNGTSRRGQVLEVDGNRAVVQVFEGTSGI 84
Query: 67 DVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
D + T+++FTGE L PVS DMLGR+FNG GKPIDGGP ++ E D+ G+ +NP R Y
Sbjct: 85 DNRNTTLQFTGEVLSTPVSKDMLGRVFNGSGKPIDGGPTVLAEAYLDIQGSSINPSERTY 144
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLG----------- 175
P + QTG+S ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++
Sbjct: 145 PEEMSQTGVSTIDVMNSIARGQKIPLFSAAGLPHNDIAAQICRQAGLVRQKAQDSMIDAG 204
Query: 176 -EEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTV 234
EEE FA+VFAAMG+ E A++FK+ FEE G++E+ VLFLNLA+DP IERIITPR+ALT
Sbjct: 205 REEEEFAIVFAAMGVNMETAHYFKQDFEENGSMEKTVLFLNLANDPTIERIITPRIALTT 264
Query: 235 AEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRI 294
AEYLA++ VLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLATIYERAGRI
Sbjct: 265 AEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRI 324
Query: 295 RGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354
G+KGSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH IYPPI+VLP+LSRL
Sbjct: 325 EGRKGSITQLPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNIQIYPPINVLPTLSRL 384
Query: 355 MKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFERE 414
MK IG+G TR+DH +++ QLY YA G+ + + AVVGEEALS D YLEF D+FER+
Sbjct: 385 MKSAIGEGMTRKDHSEVSNQLYDNYAIGKDVAAMKAVVGEEALSSEDLLYLEFLDKFERK 444
Query: 415 FVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
FV QG+YE R+I ++LDL W LL + P+ L+R+ + + K + +
Sbjct: 445 FVNQGHYEARTIFDSLDLAWTLLRLFPKELLRRITAKTLEKMYER 489
>gb|AAF26445.1| (AF220611) vacuolar H+-ATPase B subunit [Nicotiana tabacum]
Length = 486
Score = 566 bits (1444), Expect = e-160
Identities = 281/470 (59%), Positives = 352/470 (74%), Gaps = 14/470 (2%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFE 61
+E+ EY T+S + GPL+I++ VKG Y E+V I G R+GQVL+ A+VQVFE
Sbjct: 15 LEVGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFE 74
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
GT +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE RD+ G+ +NP
Sbjct: 75 GTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYRDISGSSINP 134
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------- 174
R YP + IQTGIS +D MN++ RGQK+P+FS +GLPHN++AAQI RQA ++
Sbjct: 135 SERTYPEEMIQTGISTVDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSD 194
Query: 175 -----GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPR 229
GE ++FA+VFAAMG+ E A FFK+ FEE ++ER LFLNLA+DP IERIITPR
Sbjct: 195 NLLEGGEGDNFAIVFAAMGVNMETAQFFKRDFEENRSMERVTLFLNLANDPTIERIITPR 254
Query: 230 MALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYE 289
+ALT AEYLA++ VLVILTDM++Y +ALRE+SAAREEVPG GYPGYMYTDLATIYE
Sbjct: 255 IALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGSGGYPGYMYTDLATIYE 314
Query: 290 RAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLP 349
RAGRI G+ GSITQ+PILTMP+DDITHP PDLTGYIT QI + R+LH + IYPPI+VLP
Sbjct: 315 RAGRIEGRTGSITQIPILTMPNDDITHPTPDLTGYITGRQIYIDRQLHNRQIYPPINVLP 374
Query: 350 SLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFAD 409
SLSRLMK IG+G TR DH ++ QLYA YA G+ ++ + AVVGEEALS D YLEF D
Sbjct: 375 SLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLD 434
Query: 410 RFEREFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
+FER+FVAQG Y+ R+I ++LDL W LL I P L R+ + + +Y+ +
Sbjct: 435 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFP--RLHRIPAKTLDQYYSR 482
>gi|6680754 ATPase, H+ transporting, lysosomal (vacuolar proton pump), beta
56/58 kDa, isoform 2 [Mus musculus]
>gi|1718083|sp|P50517|VAB2_MOUSE VACUOLAR ATP SYNTHASE
SUBUNIT B, BRAIN ISOFORM (ENDOMEMBRANE PROTON PUMP 58
KDA SUBUNIT) (V-ATPASE B2 SUBUNIT)
>gi|1184661|gb|AAC52411.1| (U13838) vacuolar adenosine
triphosphatase subunit B [Mus musculus]
Length = 511
Score = 564 bits (1439), Expect = e-160
Identities = 272/460 (59%), Positives = 348/460 (75%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+S + GPL+I++ VK Y E+V + G KR G L+ + A+VQVFEGT +D
Sbjct: 47 YKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGASLEVSGSKAVVQVFEGTSGID 106
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
K TS FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R YP
Sbjct: 107 AKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYP 166
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + EE+
Sbjct: 167 EEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEEN 226
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FEE G+++ LFL L +DP IERIITP +ALT AE+LA
Sbjct: 227 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLILPNDPTIERIITPCLALTTAEFLA 286
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTD ++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 287 YQCEKHVLVILTDTSSYPEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNG 346
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 347 SITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSPI 406
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+ QG
Sbjct: 407 GEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFITQG 466
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
YE+R++ ETLD+GW+LL I P+ LKR+ + + +++P+
Sbjct: 467 PYENRTVYETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPR 506
>sp|Q25691|VATB_PLAFA VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B SUBUNIT)
>gi|516490|gb|AAA20218.1| (U03915) vacuolar ATPase
subunit B [Plasmodium falciparum]
>gi|1093361|prf||2103300A vacuolar ATPase:SUBUNIT=B
[Plasmodium falciparum]
Length = 494
Score = 562 bits (1434), Expect = e-159
Identities = 267/461 (57%), Positives = 349/461 (74%), Gaps = 7/461 (1%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDL 66
EY TIS + GPL+I+E VK Y E+V I R+GQ+L+ A++QVFEGT +
Sbjct: 31 EYKTISGVQGPLVIIEDVKFPKYSEIVTIHLSDNTTRQGQILEVCGKKAVIQVFEGTSGI 90
Query: 67 DVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
D K + V +G+ LK+P+S +MLGR+FNG GKPID GP I+ +D D++G P+NP R Y
Sbjct: 91 DNKNSYVEVSGDILKMPMSDEMLGRVFNGSGKPIDKGPNILADDYLDINGNPINPQCRVY 150
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLG-------EEES 179
P++ IQTGIS ID MN++VRGQK+P+FS +GLPHN++ AQI RQA ++ +++
Sbjct: 151 PKEMIQTGISTIDVMNSIVRGQKIPLFSAAGLPHNEIGAQICRQASLVQGKDVLDHSDDN 210
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FAVVF AMG+ E A +F++ FEE G +ER LFLNLA+DP IERI+TPR+ALT AEYLA
Sbjct: 211 FAVVFGAMGVNMETARYFRQDFEENGKMERVCLFLNLANDPTIERILTPRIALTTAEYLA 270
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
F+ +M V VILTDM++Y +ALRE+S+AREEVPGRRGYPGYMY+DL+TIYERAGR+ G+ G
Sbjct: 271 FEKEMHVFVILTDMSSYADALREVSSAREEVPGRRGYPGYMYSDLSTIYERAGRVEGRNG 330
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ PILTMP+DDITHPIPDLTGYITEGQI + R L+ + IYPPI+VLPSLSRLMK GI
Sbjct: 331 SITQFPILTMPNDDITHPIPDLTGYITEGQIFVDRNLYNRQIYPPINVLPSLSRLMKSGI 390
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G TR DHP ++ QLY+ YA + ++ + AV+GEEALS D YLEF D+FE+ F+ Q
Sbjct: 391 GHNMTRIDHPYVSDQLYSNYAIAQDVKAMKAVIGEEALSNDDILYLEFLDKFEKRFITQN 450
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPKY 460
YE R I ++LD+ WELL I PE LK++K +++ KY+P++
Sbjct: 451 TYECRDIYQSLDIAWELLRIFPEDMLKKIKTDILSKYYPRH 491
>gb|AAF26763.1|AC007396_12 (AC007396) T4O12.24 [Arabidopsis thaliana]
Length = 520
Score = 562 bits (1432), Expect = e-159
Identities = 284/504 (56%), Positives = 356/504 (70%), Gaps = 46/504 (9%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFE 61
+E+ EY T+S + GPL+I++ VKG Y E+V I G R+GQVL+ A+VQVFE
Sbjct: 13 LEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFE 72
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
GT +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP
Sbjct: 73 GTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINP 132
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE----- 176
R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++
Sbjct: 133 SERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTV 192
Query: 177 -------EESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNL------------- 216
E++FA+VFAAMG+ E A FFK+ FEE G++ER LFLNL
Sbjct: 193 DLLEDHGEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLVNLTSIADCHIME 252
Query: 217 ---------------------ADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTN 255
A+DP IERIITPR+ALT AEYLA++ VLVILTDM++
Sbjct: 253 FFQVFRCFLALNRFNLPLFQQANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSS 312
Query: 256 YCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDIT 315
Y +ALRE+SAAREEVPGRRGYPGYMYTDLATIYERAGRI G+KGSITQ+PILTMP+DDIT
Sbjct: 313 YADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDIT 372
Query: 316 HPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQL 375
HP PDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK IG+G TR+DH ++ QL
Sbjct: 373 HPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHSDVSNQL 432
Query: 376 YAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEETLDLGWE 435
YA YA G+ ++ + AVVGEEALS D YLEF D+FER+FV QG Y+ R+I ++LDL W
Sbjct: 433 YANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVMQGAYDTRNIFQSLDLAWT 492
Query: 436 LLSILPESELKRVKKEMIMKYHPK 459
LL I P L R+ + + +++ +
Sbjct: 493 LLRIFPRELLHRIPAKTLDQFYSR 516
>gi|11430919 ATPase, H+ transporting, lysosomal (vacuolar proton pump), beta
polypeptide, 56/58kD, isoform 1 [Homo sapiens]
Length = 513
Score = 559 bits (1426), Expect = e-158
Identities = 269/460 (58%), Positives = 349/460 (75%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+ + GPL++++ VK Y E+V G +R GQVL+ AIVQVFEGT +D
Sbjct: 41 YRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGID 100
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
+ T+ FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D++G P+NP +R YP
Sbjct: 101 ARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYP 160
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGIS ID MN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + +++
Sbjct: 161 EEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDN 220
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FE+ G + LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 221 FAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLA 280
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 281 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGG 340
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTG+ITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 341 SITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 400
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+ QG
Sbjct: 401 GEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQG 460
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
YE+RS+ E+LDLGW+LL I P+ LKR+ + +I +++ +
Sbjct: 461 PYENRSVFESLDLGWKLLRIFPKEMLKRIPQAVIDEFYSR 500
>sp|P15313|VAB1_HUMAN VACUOLAR ATP SYNTHASE SUBUNIT B, KIDNEY ISOFORM (ENDOMEMBRANE
PROTON PUMP 58 KDA SUBUNIT) (V-ATPASE B1 SUBUNIT)
>gi|106205|pir||A33281 H+-transporting ATP synthase (EC
3.6.1.34) 58K chain - human
Length = 513
Score = 556 bits (1418), Expect = e-157
Identities = 268/460 (58%), Positives = 348/460 (75%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+ + GPL++++ VK Y E+V G +R GQVL+ AIVQVFEGT +D
Sbjct: 41 YRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGID 100
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
+ T+ FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D++G P+NP +R YP
Sbjct: 101 ARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYP 160
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGIS ID MN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + +++
Sbjct: 161 EEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDN 220
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FE+ G + LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 221 FAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLA 280
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 281 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGG 340
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTG+ITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 341 SITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 400
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+ QG
Sbjct: 401 GEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQG 460
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
YE+RS+ E+LDL W+LL I P+ LKR+ + +I +++ +
Sbjct: 461 PYENRSMFESLDLSWKLLRIFPKEMLKRIPQAVIDEFYSR 500
>gi|4502309 ATPase, H+ transporting, lysosomal (vacuolar proton pump), beta
polypeptide, 56/58kD, isoform 1; V-ATPASE; ATPase, H+
transporting, lysosomal, beta polypeptide, 58kD
(vacuolar proton pump, subunit 3) [Homo sapiens]
>gi|190460|gb|AAA36498.1| (M25809) proton pump 58 kDa
subunit [Homo sapiens]
Length = 511
Score = 556 bits (1418), Expect = e-157
Identities = 268/460 (58%), Positives = 348/460 (75%), Gaps = 8/460 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+ + GPL++++ VK Y E+V G +R GQVL+ AIVQVFEGT +D
Sbjct: 39 YRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGID 98
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
+ T+ FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D++G P+NP +R YP
Sbjct: 99 ARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYP 158
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGIS ID MN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + +++
Sbjct: 159 EEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDN 218
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FE+ G + LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 219 FAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLA 278
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 279 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGG 338
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTG+ITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 339 SITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 398
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+ QG
Sbjct: 399 GEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQG 458
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
YE+RS+ E+LDL W+LL I P+ LKR+ + +I +++ +
Sbjct: 459 PYENRSMFESLDLSWKLLRIFPKEMLKRIPQAVIDEFYSR 498
>sp|P31407|VAB1_BOVIN VACUOLAR ATP SYNTHASE SUBUNIT B, KIDNEY ISOFORM (ENDOMEMBRANE
PROTON PUMP 58 KDA SUBUNIT) (V-ATPASE B1 SUBUNIT)
>gi|543147|pir||C44138 vacuolar H+-transporting ATPase
(EC 3.6.1.-) 56k chain, renal - bovine
>gi|162709|gb|AAA30394.1| (M88691) vacuolar H+-ATPase
[Bos taurus]
Length = 513
Score = 554 bits (1412), Expect = e-157
Identities = 267/457 (58%), Positives = 346/457 (75%), Gaps = 8/457 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+ + GPL++++ VK Y E+V +G +R GQVL+ AIVQVFEGT +D
Sbjct: 41 YRTVCSVNGPLVVLDQVKFAQYAEIVNFTLPNGTQRSGQVLEVSGTKAIVQVFEGTSGID 100
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
+ T+ FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D++G P+NP R YP
Sbjct: 101 AQKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHDRIYP 160
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ I+TGIS ID MN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + +++
Sbjct: 161 EEMIETGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDN 220
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FE+ G + LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 221 FAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLA 280
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 281 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGG 340
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTG+ITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 341 SITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 400
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE++F+ QG
Sbjct: 401 GEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKKFINQG 460
Query: 420 YYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKY 456
YE RS+ E+LDLGW+LL P+ LKR+ + +I ++
Sbjct: 461 PYEKRSVFESLDLGWKLLRTFPKEMLKRIPQNIIDEF 497
>pir||B71313 probable V-type ATPase, subunit B (atpB-2) - syphilis spirochete
>gi|3322820|gb|AAC65515.1| (AE001228) V-type ATPase,
subunit B (atpB-2) [Treponema pallidum]
Length = 480
Score = 554 bits (1411), Expect = e-156
Identities = 262/449 (58%), Positives = 342/449 (75%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y +S I GP+++ + +G YGE+ I G R G+++D + ++QVF T L
Sbjct: 6 YRGLSSIDGPIVVAKRREGAFYGEITAIRDRFGALRTGRIIDLSQECCLIQVFGSTLGLS 65
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
+ + F +++ V ++GR+F+G+G+PIDG PE++ R+V+G P+NP AR YP
Sbjct: 66 LDGACLEFLDVPMQLRVCEGLMGRVFDGLGRPIDGFPEVLSSQLRNVNGYPINPYARVYP 125
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAM 187
RDFIQTGISAIDGMNTL+RGQKLPIFSG+GL HN+LAAQI RQAK+LG +E+F +VFA M
Sbjct: 126 RDFIQTGISAIDGMNTLIRGQKLPIFSGNGLAHNRLAAQIIRQAKILGTDEAFVMVFAGM 185
Query: 188 GITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVL 247
GI ++ A FF SFEETG + + V+FL+LAD P+IERIITPR ALT AEYLAF+ + VL
Sbjct: 186 GIKHDVARFFVSSFEETGVLSKVVMFLSLADAPSIERIITPRCALTAAEYLAFEKNKHVL 245
Query: 248 VILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPIL 307
VI TDMTNYCEALRE+S R EVPGR+GYPGY+Y+DLA +YERAGR++G GS+TQ+PIL
Sbjct: 246 VIFTDMTNYCEALREVSTTRGEVPGRKGYPGYLYSDLAELYERAGRVKGSSGSVTQIPIL 305
Query: 308 TMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRED 367
TMP+DDI+HPIPDLTGYITEGQIVL R+L ++G+YPPI LPSLSRLMKDGIG+G TR D
Sbjct: 306 TMPNDDISHPIPDLTGYITEGQIVLQRDLSQRGLYPPIGCLPSLSRLMKDGIGEGMTRAD 365
Query: 368 HPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIE 427
H ++ QL+A+YA +S+R L ++VGEE L DK YL F D FE+ F+ Q +EDRSI
Sbjct: 366 HHAVSSQLFASYARVQSVRSLASIVGEEELPALDKCYLRFGDLFEQYFLTQDEHEDRSIS 425
Query: 428 ETLDLGWELLSILPESELKRVKKEMIMKY 456
+TLD+GW LLS+LP +EL R+ ++I +Y
Sbjct: 426 QTLDIGWSLLSLLPRTELYRIDPKLIDQY 454
>dbj|BAA97567.1| (AB023581) vacuolar ATPase B subunit [Blastocystis hominis]
Length = 484
Score = 549 bits (1399), Expect = e-155
Identities = 265/465 (56%), Positives = 344/465 (72%), Gaps = 7/465 (1%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFE 61
+E +Y TIS + GPL+++E VKG + E+V ++ +GE RKGQVL+ N AIVQVFE
Sbjct: 6 VEPRLDYRTISGVNGPLVVLENVKGPRFSEIVNLKLGNGEMRKGQVLEIFGNKAIVQVFE 65
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
GT +D T FTG+ +++ +S +MLGR FNG G ID P ++ E+ D G P+NP
Sbjct: 66 GTSGIDNTRTHCEFTGDIMRMAISEEMLGRTFNGSGVAIDNAPPVLAEEYLDTDGQPINP 125
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLG------ 175
AR YP++ IQTGISAID MN++ RGQK+P+FS SGLPHN+L AQI RQA ++
Sbjct: 126 YARTYPKEMIQTGISAIDVMNSIARGQKIPLFSASGLPHNELGAQICRQAGLVAGKDIHD 185
Query: 176 -EEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTV 234
E++FA+VF AMG+ E A FF+ F E G ++R LFLNLA+DP +ERIITPR+ALT
Sbjct: 186 DHEDNFAMVFGAMGVNMETARFFRNDFTENGTMQRTALFLNLANDPTMERIITPRIALTT 245
Query: 235 AEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRI 294
AEYLA++ D+ VLVILTDM++Y +ALRE+SAAREEVP RRGYPGYMYTDL+T+YERAGR+
Sbjct: 246 AEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPSRRGYPGYMYTDLSTLYERAGRV 305
Query: 295 RGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354
G+ GSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R LH++GIYPPI+VLPSLSRL
Sbjct: 306 TGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYIDRSLHKRGIYPPINVLPSLSRL 365
Query: 355 MKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFERE 414
MK IGKG TR DH ++ QLY YA G+ + + AVVGEEAL+ D YL+F + FE
Sbjct: 366 MKSAIGKGMTRHDHGAVSNQLYTNYATGKDVMAMKAVVGEEALTAEDHFYLKFTEDFENT 425
Query: 415 FVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
FV QG YE RSI ++LD W +L P+ LK++ ++I +++ +
Sbjct: 426 FVNQGPYESRSIFDSLDKAWNMLRTFPKEMLKKIPADIIEEFYAR 470
>gb|AAF88162.1|AC026234_13 (AC026234) Nearly identical to vacuolar ATP synthase subunit B
(V-atpase B subunit)(V-atpase 57 KD subunit) from
Arabidopsis thaliana gi|137465 and is a member of ATP
synthase alpha/beta PF|00006 family and contains an ATP
synthase beta chain PF|01038 >
Length = 485
Score = 534 bits (1362), Expect = e-151
Identities = 268/471 (56%), Positives = 341/471 (71%), Gaps = 15/471 (3%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFE 61
+E+ EY T+S + GPL+I++ VKG Y E+V I G R+GQVL+ A+VQVFE
Sbjct: 13 LEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFE 72
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
GT +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP
Sbjct: 73 GTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINP 132
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE----- 176
R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++
Sbjct: 133 SERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTE 192
Query: 177 --------EESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITP 228
E++FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITP
Sbjct: 193 NLIQEDHGEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITP 252
Query: 229 RMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIY 288
R+ALT AEYLA++ VLVILTDM++Y +ALR + R + G YTDLATIY
Sbjct: 253 RIALTTAEYLAYECGKHVLVILTDMSSYADALRFCCSRRSS--WKTWISGVYYTDLATIY 310
Query: 289 ERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVL 348
ERAGRI G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+LH + IYPPI+VL
Sbjct: 311 ERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVL 370
Query: 349 PSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFA 408
PSLSRLMK IG+G TR+DH ++ QLYA YA G+ ++ + AVVGEEALS D YLEF
Sbjct: 371 PSLSRLMKSAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFL 430
Query: 409 DRFEREFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
D+FER+FV QG Y+ R+I ++LDL W LL I P L R+ + + +++ +
Sbjct: 431 DKFERKFVMQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSR 481
>sp|Q26976|VATB_TRYCO VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B SUBUNIT)
>gi|480569|pir||S37050 H+-transporting ATPase (EC
3.6.1.35) chain B, vacuolar - Trypanosoma congolense
>gi|397638|emb|CAA81063.1| (Z25815) vacuolar ATPase
(regulatory (B) subunit) [Trypanosoma congolense]
Length = 485
Score = 534 bits (1361), Expect = e-151
Identities = 257/445 (57%), Positives = 339/445 (75%), Gaps = 4/445 (0%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDL 66
EY+TI + GPL+I+ V+ + E+V IE G R+GQVL+ + A+VQVFEGT +
Sbjct: 26 EYTTIRAVNGPLVILGDVRLPTFAEIVNIELSDGTMRRGQVLEVDGDKAVVQVFEGTSGI 85
Query: 67 DVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
DV + FTG+ +++ VS DMLGR+FNG G PID GP ++ E RD+ G P+NP AR Y
Sbjct: 86 DVMRSKCEFTGKVMELGVSEDMLGRVFNGSGIPIDDGPPVLAEQYRDIQGIPINPRARVY 145
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL---GEEESFAVV 183
P + IQTGIS+ID M ++ RGQK+P+FSG+GLPHN++AAQI RQA ++ G++E F +V
Sbjct: 146 PEEMIQTGISSIDVMTSISRGQKIPLFSGAGLPHNEIAAQIVRQAGLVRKEGKQEDFCIV 205
Query: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243
FAAMG+ E A FF+ FEE G++E+ VLF+NLA+DP IERI+TPR+ALT AEYLA+D
Sbjct: 206 FAAMGVNQETARFFRTEFEENGSMEKTVLFMNLANDPTIERIVTPRLALTTAEYLAYDCG 265
Query: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQ 303
VLVILTDM++Y +ALRE+SAAREEVPGRRG+PGYMYTDLA IYERAGR+ G+ GSITQ
Sbjct: 266 KHVLVILTDMSSYADALREVSAAREEVPGRRGFPGYMYTDLACIYERAGRVLGRAGSITQ 325
Query: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + +YPPI++LPSLSRLMK+ IG+G
Sbjct: 326 IPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQLYPPINILPSLSRLMKNAIGEGM 385
Query: 364 TREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYED 423
TR DH ++ Q+YA L + AVVGEE LS D +LEF ++FE++F+ QG++E
Sbjct: 386 TRRDHSGVSNQMYARMRLDDILA-MKAVVGEETLSSEDLLHLEFLEKFEKKFICQGFHES 444
Query: 424 RSIEETLDLGWELLSILPESELKRV 448
R + ++LDL W+LL I P+ L ++
Sbjct: 445 RDVFQSLDLCWQLLRIFPKVLLNKI 469
>pir||A39212 H+-transporting ATPase (EC 3.6.1.35), vacuolar - human (fragment)
>gi|179563|gb|AAA35610.1| (M60346) H+-ATPase B subunit
[Homo sapiens]
Length = 406
Score = 531 bits (1352), Expect = e-150
Identities = 253/401 (63%), Positives = 317/401 (78%), Gaps = 8/401 (1%)
Query: 67 DVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
D K TS FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R Y
Sbjct: 1 DAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIY 60
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EE 178
P + IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + EE
Sbjct: 61 PEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEE 120
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
+FA+VFAAMG+ E A FFK FEE G+++ LFLNLA+DP IERIITPR+ALT AE+L
Sbjct: 121 NFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFL 180
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK 298
A+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+
Sbjct: 181 AYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRN 240
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK
Sbjct: 241 GSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSA 300
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
IG+G TR+DH ++ QLY AYA G+ ++ + AVVGEEAL+ D YLEF +FER F+AQ
Sbjct: 301 IGEGMTRKDHADVSNQLYRAYAIGKDVQAVKAVVGEEALTSDDLLYLEFLQKFERNFIAQ 360
Query: 419 GYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
G YE+R++ ETLD+GW+LL I P+ LKR+ + + +++P+
Sbjct: 361 GPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPR 401
>sp|P49712|VATB_CHICK VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B SUBUNIT)
>gi|675489|gb|AAA82983.1| (U20766) vacuolar H+-ATPase B
subunit [Gallus gallus]
Length = 453
Score = 527 bits (1342), Expect = e-148
Identities = 250/397 (62%), Positives = 315/397 (78%), Gaps = 8/397 (2%)
Query: 71 TSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDF 130
TS FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D+ G P+NP R YP +
Sbjct: 51 TSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPAVLAEDFLDIMGQPINPQCRIYPEEM 110
Query: 131 IQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EESFAV 182
IQTGISAIDGMN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + EE+FA+
Sbjct: 111 IQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVMDYSEENFAI 170
Query: 183 VFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDY 242
VFAAMG+ E A FFK FEE G+++ LFLNLA+DP IERIITPR+ALT AE+LA+
Sbjct: 171 VFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQC 230
Query: 243 DMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSIT 302
+ VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ GSIT
Sbjct: 231 EKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSIT 290
Query: 303 QMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKG 362
Q+PILTMP+DDITHPIPDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK IG+G
Sbjct: 291 QIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEG 350
Query: 363 RTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYE 422
TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+AQG YE
Sbjct: 351 MTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFIAQGPYE 410
Query: 423 DRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
+R++ ETLD+GW+LL I P+ LKR+ + + +++P+
Sbjct: 411 NRTVYETLDIGWQLLRIFPKEMLKRIPQTTLAEFYPR 447
>gb|AAD11943.1| (AF107478) H+-ATPase beta 1 subunit [Homo sapiens]
Length = 426
Score = 522 bits (1331), Expect = e-147
Identities = 252/422 (59%), Positives = 320/422 (75%), Gaps = 8/422 (1%)
Query: 8 YSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD 67
Y T+ + GPL++++ VK Y E+V G +R GQVL+ AIVQVFEGT +D
Sbjct: 5 YRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGID 64
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
+ T+ FTG+ L+ PVS DMLGR+FNG GKPID GP ++ ED D++G P+NP +R YP
Sbjct: 65 ARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYP 124
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE--------EES 179
+ IQTGIS ID MN++ RGQK+PIFS +GLPHN++AAQI RQA ++ + +++
Sbjct: 125 EEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDN 184
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
FA+VFAAMG+ E A FFK FE+ G + LFLNLA+DP IERIITPR+ALT AE+LA
Sbjct: 185 FAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLA 244
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VLVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ G
Sbjct: 245 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGG 304
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SITQ+PILTMP+DDITHPIPDLTG+ITEGQI + R+LH + IYPPI+VLPSLSRLMK I
Sbjct: 305 SITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 364
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G+G TR+DH ++ QLYA YA G+ ++ + AVVGEEAL+ D YLEF +FE+ F+ QG
Sbjct: 365 GEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQG 424
Query: 420 YY 421
Y
Sbjct: 425 PY 426
>pir||B42254 H+-transporting ATPase (EC 3.6.1.35) chain B isoform 2 - bovine
(fragment) >gi|162699|gb|AAA30389.1| (M83130) H+-ATPase
B subunit [Bos taurus]
Length = 415
Score = 509 bits (1296), Expect = e-143
Identities = 243/387 (62%), Positives = 305/387 (78%), Gaps = 8/387 (2%)
Query: 83 PVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMN 142
PVS DMLGRIF+G G+PID GP++ ED D++G+P+NP AR YP + I TG+SAID MN
Sbjct: 1 PVSEDMLGRIFDGSGRPIDNGPKVFAEDYLDINGSPINPYARIYPEEMISTGVSAIDTMN 60
Query: 143 TLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL--------GEEESFAVVFAAMGITYEEA 194
++ RGQK+PIFS SGLPHN++AAQI RQA ++ G EE+F++VFAAMG+ E A
Sbjct: 61 SIARGQKIPIFSASGLPHNEIAAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETA 120
Query: 195 NFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMT 254
FFK+ FEE G++ER LFLNLA+DP IERIITPR+ALT AEYLA+ + VL ILTDM+
Sbjct: 121 RFFKRDFEENGSLERTSLFLNLANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMS 180
Query: 255 NYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDI 314
+Y +ALRE+SAAREEVPGRRGYPGYMYTDL+TIYERAGR+ G+ GSITQ+PILTMP+DDI
Sbjct: 181 SYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDI 240
Query: 315 THPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQ 374
THPIPDLTGYITEGQI + R+LH KGIYPPI+VLPSLSRLMK IG+G TR+DH ++ Q
Sbjct: 241 THPIPDLTGYITEGQIFVDRQLHNKGIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQ 300
Query: 375 LYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEETLDLGW 434
LYA YA G+ + AVVGEEALS DK LEF ++FE+ F+ QG YEDR++ E+LD W
Sbjct: 301 LYAKYAIGKDAAAMKAVVGEEALSIEDKLSLEFLEKFEKTFITQGAYEDRTVFESLDQAW 360
Query: 435 ELLSILPESELKRVKKEMIMKYHPKYR 461
LL I P+ L R+ +++ +++ + R
Sbjct: 361 SLLRIYPKEMLNRISPKILDEFYDRAR 387
>sp|Q43433|VAT2_GOSHI VACUOLAR ATP SYNTHASE SUBUNIT B ISOFORM 2 (V-ATPASE B SUBUNIT)
>gi|459200|gb|AAA57550.1| (U07053) vacuolar H+-ATPase
subunit B [Gossypium hirsutum]
Length = 386
Score = 495 bits (1261), Expect = e-139
Identities = 241/382 (63%), Positives = 295/382 (77%), Gaps = 12/382 (3%)
Query: 90 GRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQK 149
GRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK
Sbjct: 1 GRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQK 60
Query: 150 LPIFSGSGLPHNQLAAQIARQAKVL------------GEEESFAVVFAAMGITYEEANFF 197
+P FS +GLPHN++AAQI RQA ++ GEE++FA+VFAAMG+ E A FF
Sbjct: 61 IPFFSAAGLPHNEIAAQICRQAGLVKRLEKAGDLLEDGEEDNFAIVFAAMGVNMETAQFF 120
Query: 198 KKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYC 257
K+ FEE G++ER LFLNLA+DP IERIITPR+ALT AEYLA++ VLVILTDM++Y
Sbjct: 121 KRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYA 180
Query: 258 EALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHP 317
+ALRE+SAAREEVPGRRGYPGYMYTDLATIYERAGRI G+KGSITQ+PILTMP+DDITHP
Sbjct: 181 DALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHP 240
Query: 318 IPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYA 377
PDLTGYITEGQI + R+LH + IYPPI+VLPSLSRLMK IG+G TR DH ++ QLYA
Sbjct: 241 TPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYA 300
Query: 378 AYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEETLDLGWELL 437
YA G+ ++ + AVVGEEALS D YLEF D+FER+FV QG Y+ R+I ++LDL W LL
Sbjct: 301 NYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLL 360
Query: 438 SILPESELKRVKKEMIMKYHPK 459
I P L R+ + + +Y+ +
Sbjct: 361 RIFPRELLHRIPAKTLDQYYSR 382
>dbj|BAA89597.1| (AB036925) vacuolar H+-ATPase B subunit [Citrus unshiu]
Length = 365
Score = 450 bits (1145), Expect = e-125
Identities = 219/350 (62%), Positives = 271/350 (76%), Gaps = 12/350 (3%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFE 61
+E++ EY T++ + GPL+I++ VKG Y E+V I G R+GQVL+ A+VQVFE
Sbjct: 15 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFE 74
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
GT +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP
Sbjct: 75 GTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINP 134
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------- 174
R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++
Sbjct: 135 SERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTD 194
Query: 175 -----GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPR 229
GEE++FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR
Sbjct: 195 NLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPR 254
Query: 230 MALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYE 289
+ALT AEYLA++ VLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLA IYE
Sbjct: 255 IALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYE 314
Query: 290 RAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRK 339
RAGRI G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+L +
Sbjct: 315 RAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNR 364
>gb|AAF91293.1|AF236667_1 (AF236667) vacuolar ATP synthase subunit B [Aspergillus nidulans]
Length = 386
Score = 450 bits (1144), Expect = e-125
Identities = 220/350 (62%), Positives = 272/350 (76%), Gaps = 10/350 (2%)
Query: 119 LNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL---- 174
L PV R YP + I TGISAID MN++ R QK+PIFS SGLPHN++AAQI RQA ++
Sbjct: 9 LLPVLRVYPEEMISTGISAIDTMNSIAR-QKIPIFSASGLPHNEIAAQICRQAGLVKRPT 67
Query: 175 -----GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPR 229
G E++F++VFAAMG+ E + FF + FEE G++ER LFLNLA+DP IERIITPR
Sbjct: 68 KDVHDGHEDNFSIVFAAMGVNMETSRFFTRDFEENGSMERVTLFLNLANDPTIERIITPR 127
Query: 230 MALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYE 289
+ALT AEY A+ + VLVI+TD++ YC+ALRE+SAAREEVPGRRGYPGYMYTDL+TIYE
Sbjct: 128 LALTTAEYYAYQLEKHVLVIMTDLSAYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYE 187
Query: 290 RAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLP 349
RAGR++G+ GSITQ+PILTMP+DDITHPIPDLTGYITEGQI + R+L+ KGIYPPI+VLP
Sbjct: 188 RAGRVQGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFIDRQLYNKGIYPPINVLP 247
Query: 350 SLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFAD 409
SLSRLMK IGKGRTR+DH ++ QLYA YA GR + AVVGEEALS DK LEF +
Sbjct: 248 SLSRLMKSAIGKGRTRDDHSDVSNQLYAKYAIGRDAAAMKAVVGEEALSSEDKLSLEFLE 307
Query: 410 RFEREFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
+FER F+ Q YE RSI E+LD+ W LL I P L R+ K ++ +++ +
Sbjct: 308 KFERTFINQSAYESRSIFESLDIAWNLLRIYPPHLLNRIPKRVLDEFYAR 357
>sp|P20022|ATPB_METTL ATP SYNTHASE BETA CHAIN >gi|80952|pir||S05029 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Methanococcus
thermolithotrophicus (fragment) >gi|226413|prf||1511093A
H ATPase regulatory subunit [Methanococcus
thermolithotrophicus]
Length = 253
Score = 405 bits (1030), Expect = e-112
Identities = 194/249 (77%), Positives = 222/249 (88%)
Query: 71 TSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDF 130
T VRFTGET K+ VS++MLGRIFNG GKPIDGGPEIIPE + D++G PLNPV+R P F
Sbjct: 5 TKVRFTGETAKIGVSLEMLGRIFNGAGKPIDGGPEIIPEKKLDINGYPLNPVSRNPPNAF 64
Query: 131 IQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGIT 190
+QTGIS IDG NTLVRGQKLPIFSGSGLPHN LAAQIARQAKV GE E FAVVFAAMGIT
Sbjct: 65 VQTGISTIDGTNTLVRGQKLPIFSGSGLPHNTLAAQIARQAKVRGEGEQFAVVFAAMGIT 124
Query: 191 YEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVIL 250
EEAN+F + F++ GA+E AV+F+NLA+DPAIERIITPR+ALT AEYLA++ DM VLV+L
Sbjct: 125 NEEANYFMEEFKKPGALENAVVFINLANDPAIERIITPRLALTTAEYLAYEKDMHVLVVL 184
Query: 251 TDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMP 310
TDMTNYCEALREI+AAR EVPGRRGYPGYMYTDLAT+YERAGR++G+KG++TQ+PILTMP
Sbjct: 185 TDMTNYCEALREIAAARNEVPGRRGYPGYMYTDLATLYERAGRVKGRKGTVTQIPILTMP 244
Query: 311 DDDITHPIP 319
DDITHPIP
Sbjct: 245 HDDITHPIP 253
>gb|AAB04559.1| (U63317) vacuolar H+ ATPase B subunit [Dictyostelium discoideum]
Length = 276
Score = 356 bits (903), Expect = 4e-97
Identities = 171/274 (62%), Positives = 216/274 (78%)
Query: 189 ITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLV 248
+ E A+FFK+ FEE+G+++R L LNLAD P IERIITPR+ALT AEYLA+ + VLV
Sbjct: 1 VNMETASFFKRDFEESGSMDRTALSLNLADHPTIERIITPRLALTTAEYLAYQCEKHVLV 60
Query: 249 ILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILT 308
+LTDM++Y +ALRE+SAAREEVPGRR YPGYMYTDL+TI ERAGRI+G+KGSITQ+PI T
Sbjct: 61 LLTDMSSYADALREVSAAREEVPGRRRYPGYMYTDLSTINERAGRIQGRKGSITQIPIWT 120
Query: 309 MPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDH 368
MP+DDITHPIPDLTGYITEGQI + R+L+ + IYPPI+VLPS SRLMK IG+ TR DH
Sbjct: 121 MPNDDITHPIPDLTGYITEGQIFIDRQLNNRQIYPPINVLPSFSRLMKSAIGEDMTRGDH 180
Query: 369 PQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEE 428
+++ Q+YA YA G+ ++ + AVVGEEALS DK YLEF +RFE FV Q +YE+R I
Sbjct: 181 SEVSNQMYANYAIGKDVQAMKAVVGEEALSSEDKLYLEFLERFESSFVGQNHYENRDIFN 240
Query: 429 TLDLGWELLSILPESELKRVKKEMIMKYHPKYRK 462
+LDLGW LL P + LKR+ ++ I +Y+ + K
Sbjct: 241 SLDLGWSLLKTFPSNLLKRITEKTIKQYYSRSSK 274
>pir||H71325 probable V-type ATPase, subunit B (atpB-1) - syphilis spirochete
>gi|3322710|gb|AAC65413.1| (AE001220) V-type ATPase,
subunit B (atpB-1) [Treponema pallidum]
Length = 430
Score = 291 bits (738), Expect = 9e-78
Identities = 185/458 (40%), Positives = 257/458 (55%), Gaps = 32/458 (6%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGT 63
M K Y I I G ++ V KGV YGE+ ++T G+ +V ++ +QVF G
Sbjct: 1 MYKVYEKIESINGSVITVRA-KGVHYGELARVKTAFGDSL-AEVNKLEGDVVSLQVFAGG 58
Query: 64 RDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVA 123
R + + VRF G + V S +LGRIFNG G P DGGP + E R ++ G +NP
Sbjct: 59 RGISTGS-EVRFLGRGMLVSFSDYLLGRIFNGSGVPRDGGPAL-KEGRVEIGGPSVNPAK 116
Query: 124 RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVV 183
R R I+TGI ID NTLV QKLPIFS SG P+N+L A+IA QA+V +V
Sbjct: 117 RVIARRMIRTGIPMIDVFNTLVVSQKLPIFSSSGEPYNELLARIAMQAEV------DVIV 170
Query: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243
MG+ +++ +FK + EE GA+ RAVLF++ A DP +E ++ P M L VAE A
Sbjct: 171 LGGMGLKHDDYLYFKSALEEAGALSRAVLFVHTASDPTVECLMVPDMCLAVAEQFALK-G 229
Query: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQ 303
VLV+LTDMTN+ +A++EI+ +E+VP RGYPG +Y+ LA+ YE+A GS+T
Sbjct: 230 RDVLVLLTDMTNFADAMKEIAIIQEQVPSNRGYPGDLYSQLASRYEKAVDF-DDAGSVTI 288
Query: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+ + TMP DD+THP+PD TGYITEGQ L I+ SLSRL ++ GR
Sbjct: 289 LAVTTMPGDDVTHPVPDNTGYITEGQFYLKN--------GRIEPFGSLSRLKQN--VNGR 338
Query: 364 TREDHPQLAQ---QLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
TR DH L +LYAAY + R + A+SE D+K L + FE + +
Sbjct: 339 TRADHRALMDNMIKLYAAYRDALEKRSM-----GFAMSEWDEKLLTYGGLFEAQLMDLSV 393
Query: 421 YEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHP 458
+ +EE D GW++L E ++ ++I Y P
Sbjct: 394 --NIPLEEAFDTGWKILGRCFTPEETGIRSDLINTYWP 429
>pir||A71531 probable ATP synthase chain B - Chlamydia trachomatis (serotype D,
strain UW3/Cx) >gi|3328723|gb|AAC67900.1| (AE001303) ATP
Synthase Subunit B [Chlamydia trachomatis]
Length = 438
Score = 289 bits (732), Expect = 4e-77
Identities = 182/456 (39%), Positives = 254/456 (54%), Gaps = 23/456 (5%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGT 63
M Y+ I+ I G L+ VE +G + GE+V+IE G VL +QVF GT
Sbjct: 1 MQTIYTKITDIKGNLITVEA-EGASLGELVQIERADGRSSYASVLRFDARKVTLQVFGGT 59
Query: 64 RDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVA 123
L V F G ++V +LGR FNG GKPID E E + NPV
Sbjct: 60 SGLSTGD-KVIFLGRPMEVIYGDSLLGRRFNGTGKPIDREDECFGEPI-PITTPSFNPVC 117
Query: 124 RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVV 183
R PR+ ++T I ID N LV+ QK+PIFS SG HN L +IA Q ++ V+
Sbjct: 118 RIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNALLMRIAAQT------DADIVI 171
Query: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243
MG+T+ + NFF K + G ++ V+F++ A D +E ++ P MAL AE A +
Sbjct: 172 IGGMGLTFVDYNFFVKESQRLGFADKCVMFIHKAVDAPVECVLIPDMALACAERFALEQK 231
Query: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQ 303
VLV+LTDMT + +AL+E++ +++P RGYPG +Y+DLA YE+A I + GSIT
Sbjct: 232 KNVLVLLTDMTAFADALKEMAITMDQIPANRGYPGSLYSDLAVRYEKAVDI-AQGGSITL 290
Query: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+ + TMP DDITHP+PD TG+ITEGQ L ID SLSRL + IGK +
Sbjct: 291 ISVTTMPGDDITHPVPDNTGFITEGQFYLKDN--------RIDPFGSLSRLKQLVIGK-K 341
Query: 364 TREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYED 423
TREDH LA L YA+ R + +++ + LS DKK L F++ FE ++ +
Sbjct: 342 TREDHGDLANALIRLYADSRKSAERMSMGFK--LSNWDKKLLAFSELFEARLMS--LEVN 397
Query: 424 RSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
+EE LD+GW++LS SE +K+++I KY PK
Sbjct: 398 IPLEEALDIGWKILSQSFHSEEVGIKEQLIQKYWPK 433
>pir||D81687 ATP synthase, chain B TC0581 [imported] - Chlamydia muridarum
(strain Nigg) >gi|7190619|gb|AAF39415.1| (AE002326) ATP
synthase, subunit B [Chlamydia muridarum]
Length = 438
Score = 288 bits (730), Expect = 7e-77
Identities = 182/456 (39%), Positives = 255/456 (55%), Gaps = 23/456 (5%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGT 63
M Y+ I+ I G L+ VE +G + GE+V+IE G VL +QVF GT
Sbjct: 1 MQTIYTRITDIKGNLITVEA-EGASLGELVQIERADGRSSYASVLRFDAKKVTLQVFGGT 59
Query: 64 RDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVA 123
L V F G ++V +LGR FNG GKPID EI + + NPV
Sbjct: 60 SGLSTGDKVV-FLGRPMEVVYGDSLLGRRFNGTGKPIDN-EEICFGEPIPITTPSFNPVC 117
Query: 124 RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVV 183
R PR+ ++T I ID N LV+ QK+PIFS SG HN L +IA Q ++ V+
Sbjct: 118 RIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNALLMRIAAQT------DADIVI 171
Query: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243
MG+T+ + +FF + + G ++ V+F++ A D +E ++ P MAL AE A +
Sbjct: 172 IGGMGLTFVDYSFFVEESQRLGFADKCVMFIHKAVDAPVECVLIPDMALACAERFALEQK 231
Query: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQ 303
VLV+LTDMT + +AL+EI+ +++P RGYPG +Y+DLA YE+A I + GSIT
Sbjct: 232 KNVLVLLTDMTAFADALKEIAITMDQIPANRGYPGSLYSDLAVRYEKAVDI-AQGGSITL 290
Query: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+ + TMP DDITHP+PD TG+ITEGQ L ID SLSRL + IGK R
Sbjct: 291 ISVTTMPGDDITHPVPDNTGFITEGQFYLKDN--------RIDPFGSLSRLKQLVIGK-R 341
Query: 364 TREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYED 423
TREDH LA L YA+ R + +++ + LS DKK L FA+ FE ++ +
Sbjct: 342 TREDHGDLANALIRLYADSRKSAERMSMGFK--LSNWDKKLLAFAELFETRLMS--LEVN 397
Query: 424 RSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
+EE LD+GW++L+ SE +K+++I KY PK
Sbjct: 398 IPLEEALDIGWKILAQSFHSEEVGIKEQLIQKYWPK 433
>pir||C72121 ATP synthase, chain B CP0685 [imported] - Chlamydophila pneumoniae
(strains CWL029 and AR39) >gi|4376348|gb|AAD18242.1|
(AE001594) ATP Synthase Subunit B [Chlamydophila
pneumoniae CWL029] >gi|7189599|gb|AAF38494.1| (AE002227)
ATP synthase, subunit B [Chlamydophila pneumoniae AR39]
>gi|8978462|dbj|BAA98299.1| (AP002545) ATP synthase
subunit B [Chlamydophila pneumoniae J138]
Length = 438
Score = 282 bits (715), Expect = 4e-75
Identities = 182/456 (39%), Positives = 248/456 (53%), Gaps = 23/456 (5%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGT 63
M Y+ I+ I G L+ VE +G GE+ I G VL +QVF GT
Sbjct: 1 MQTIYTKITDIKGNLITVEA-EGARLGELATITRSDGRSSYASVLRFDLKKVTLQVFGGT 59
Query: 64 RDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVA 123
L V F G ++V +LGR NGIGKPID E E ++ NPV
Sbjct: 60 SGLSTGD-HVTFLGRPMEVTFGSSLLGRRLNGIGKPIDNEGECFGEPI-EIATPTFNPVC 117
Query: 124 RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVV 183
R PR ++T I ID N LV+ QK+PIFS SG HN L +IA Q ++ VV
Sbjct: 118 RIVPRSMVRTNIPMIDVFNCLVKSQKIPIFSSSGEHHNALLMRIAAQT------DADIVV 171
Query: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243
MG+T+ + +FF + ++ G ++ V+F++ A D +E ++ P MAL AE A +
Sbjct: 172 IGGMGLTFVDYSFFVEESKKLGFADKCVMFIHKAVDAPVECVLVPDMALACAEKFAVEEK 231
Query: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQ 303
VLV+LTDMT + +AL+EIS +++P RGYPG +Y+DLA YE+A I GSIT
Sbjct: 232 KNVLVLLTDMTAFADALKEISITMDQIPANRGYPGSLYSDLALRYEKAVEI-ADGGSITL 290
Query: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+ + TMP DDITHP+PD TGYITEGQ L ID SLSRL + IGK
Sbjct: 291 ITVTTMPSDDITHPVPDNTGYITEGQFYLRNN--------RIDPFGSLSRLKQLVIGK-V 341
Query: 364 TREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYED 423
TREDH LA L YA+ R + +A+ + LS DKK L F++ FE ++ +
Sbjct: 342 TREDHGDLANALIRLYADSRKATERMAMGFK--LSNWDKKLLAFSELFETRLMS--LEVN 397
Query: 424 RSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
+EE LD+GW++L+ SE +K ++I KY PK
Sbjct: 398 IPLEEALDIGWKILAQSFTSEEVGIKAQLINKYWPK 433
>pir||E70111 V-type ATPase, subunit B (atpB) homolog - Lyme disease spirochete
>gi|2687980|gb|AAC66484.1| (AE001122) V-type ATPase,
subunit B (atpB) [Borrelia burgdorferi]
Length = 434
Score = 280 bits (709), Expect = 2e-74
Identities = 172/456 (37%), Positives = 266/456 (57%), Gaps = 26/456 (5%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGT 63
M + YS I I G ++ V +G+ YGE+ ++ + + RE +++ QV+ GT
Sbjct: 1 MKRVYSKIESIAGNVITVTA-QGIKYGELAIVKAKDTSSLAEVIKLDREKVSL-QVYGGT 58
Query: 64 RDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVA 123
R + + ++F G +++V S ++LGRIF+G G P DGGP + ++ ++ G NP
Sbjct: 59 RGVST-SDEIKFLGHSMQVSFSDNLLGRIFDGSGNPRDGGPSL-DDNLIEIGGPSANPTK 116
Query: 124 RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVV 183
R PR+ I+TG+ ID NTLV QKLPIFS SG P+N+L +IA QA+V ++
Sbjct: 117 RIVPRNMIRTGLPMIDVFNTLVESQKLPIFSVSGEPYNELLIRIALQAEV------DLII 170
Query: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243
MG+ +++ FK S E+ GA+ RA+ F++ A+D +E + P ++L+VAE A
Sbjct: 171 LGGMGLKHDDYLTFKDSLEKGGALSRAIFFVHTANDSVVESLTVPDISLSVAEKFALK-G 229
Query: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQ 303
+VLV+LTDMTN+ +A++EIS E+VP RGYPG +Y+ LA YE+A G GSIT
Sbjct: 230 KKVLVLLTDMTNFADAMKEISITMEQVPSNRGYPGDLYSQLAYRYEKAIDFEG-AGSITI 288
Query: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+ + TMP DD+THP+PD TGYITEGQ L KG I+ SLSRL + + R
Sbjct: 289 LAVTTMPGDDVTHPVPDNTGYITEGQYYL------KG--GRIEPFGSLSRLKQ--MVNSR 338
Query: 364 TREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYED 423
TR+DH + + YA + + A+ +++ D+K L++++ FE + + +
Sbjct: 339 TRDDHRTIMDSMIKLYASSKESVEKKAMGFN--MTKWDEKLLKYSNMFESKMMDLSV--N 394
Query: 424 RSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
+EE LDLGW +L+ + +K ++I KY PK
Sbjct: 395 IPLEEALDLGWSILASCFSPKETGIKTDLIEKYWPK 430
>gb|AAB36110.1| vacuolar H(+)-ATPase subunit B [Mesembryanthemum crystallinum,
leaf, Peptide Partial, 170 aa]
Length = 170
Score = 224 bits (565), Expect = 2e-57
Identities = 109/170 (64%), Positives = 134/170 (78%), Gaps = 12/170 (7%)
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL----------- 174
YP + IQT IS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++
Sbjct: 1 YPEEMIQTRISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTENLME 60
Query: 175 -GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALT 233
GEE++FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR+ALT
Sbjct: 61 GGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALT 120
Query: 234 VAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTD 283
AEYLA++ VLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTD
Sbjct: 121 TAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTD 170
>pir||D72404 flagellum-specific ATP synthase - Thermotoga maritima (strain
MSB8) >gi|4980716|gb|AAD35310.1|AE001706_9 (AE001706)
flagellum-specific ATP synthase [Thermotoga maritima]
Length = 438
Score = 204 bits (513), Expect = 2e-51
Identities = 136/403 (33%), Positives = 214/403 (52%), Gaps = 20/403 (4%)
Query: 30 GEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDML 89
GE+ +I ++G+ +V+ RE I+ +E L + +R T + L+V VS M+
Sbjct: 42 GEMCKISLQNGKNALAEVVGFREESVILMPYEDVSGLKMGCEVIR-TNKVLEVGVSRKMI 100
Query: 90 GRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQK 149
GR+F+G+G+PIDG P +PEDR + P NP+ R +D + GI +IDG T+ +GQ+
Sbjct: 101 GRVFDGLGRPIDGKP-FVPEDRYPLINNPPNPLKRRRIKDPLPVGIRSIDGFITIGKGQR 159
Query: 150 LPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEAN-FFKKSFEETGAIE 208
+ IF+GSG+ + L IAR + V A +G E F ++ E G ++
Sbjct: 160 IGIFAGSGVGKSTLLGMIARNTT------ADINVLALIGERGREVREFIERDLGEEG-LK 212
Query: 209 RAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAARE 268
R++L ++ +D PA+ R+ + A ++AE+ D VL+++ +T + A RE+ A
Sbjct: 213 RSILVVSTSDQPALARVKSLLTATSIAEFFR-DLGYDVLLMVDSLTRWAMAQREVGLAVG 271
Query: 269 EVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEG 328
E P RGYP ++ L I ERAG KGSIT + + + DD PI D I +G
Sbjct: 272 EPPTTRGYPPSVFAGLPKILERAGN--SDKGSITAIYTVLVEADDFNEPISDTVRSIVDG 329
Query: 329 QIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDL 388
I+LSR L YP +DVL S+SRLM D + E+H + A +L + + S +DL
Sbjct: 330 HIILSRRLAESNHYPAVDVLASVSRLMNDIV-----TEEHREAANRLRSLMSAYESAKDL 384
Query: 389 VAV-VGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEETL 430
+ + + + K +E D + F+ QG +E S EETL
Sbjct: 385 IEIGAYKSGTNPLVDKAVEMKDEID-SFLKQGVFEKASFEETL 426
>emb|CAC15466.1| (AJ250811) V-ATPase B subunit [Salmo salar]
Length = 153
Score = 203 bits (512), Expect = 3e-51
Identities = 101/153 (66%), Positives = 123/153 (80%), Gaps = 8/153 (5%)
Query: 164 AAQIARQAKVLGE--------EESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLN 215
AAQI RQA ++ + +++FA+VFAAMG+ E A FFK FEE G+++ LFLN
Sbjct: 1 AAQICRQAGLVKKSKDVMDYSDDNFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLN 60
Query: 216 LADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRG 275
LA+DP IERIITPR+ALT AEYLA+ + VLVILTDM++Y EALRE+SAAREEVPGRRG
Sbjct: 61 LANDPTIERIITPRLALTSAEYLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRG 120
Query: 276 YPGYMYTDLATIYERAGRIRGKKGSITQMPILT 308
+PGYMYTDLATIYERAGR+ G+ GSITQ+PILT
Sbjct: 121 FPGYMYTDLATIYERAGRVEGRNGSITQIPILT 153
>gb|AAF08284.1|AF189782_1 (AF189782) vacuolar ATP synthase subunit B; v-ATPase subunit B;
v-type H+-ATPase subunit B [Eriocheir sinensis]
Length = 127
Score = 195 bits (491), Expect = 8e-49
Identities = 92/124 (74%), Positives = 108/124 (86%)
Query: 192 EEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILT 251
E A FFK+ FEE G++E LFLNLA+DP IERIITPR+ALT AEYLA+ + VL+ILT
Sbjct: 3 ETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTTAEYLAYQCEKHVLIILT 62
Query: 252 DMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPD 311
DM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ GSITQ+PILTMP+
Sbjct: 63 DMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRSGSITQIPILTMPN 122
Query: 312 DDIT 315
DDIT
Sbjct: 123 DDIT 126
>gb|AAF08285.1|AF189783_1 (AF189783) vacuolar ATP synthase subunit B; v-ATPase subunit B;
v-type H+-ATPase subunit B [Chasmagnathus granulata]
Length = 126
Score = 195 bits (491), Expect = 8e-49
Identities = 92/124 (74%), Positives = 108/124 (86%)
Query: 192 EEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILT 251
E A FFK+ FEE G++E LFLNLA+DP IERIITPR+ALT AEYLA+ + VL+ILT
Sbjct: 3 ETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTTAEYLAYQCEKHVLIILT 62
Query: 252 DMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPD 311
DM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ GSITQ+PILTMP+
Sbjct: 63 DMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRSGSITQIPILTMPN 122
Query: 312 DDIT 315
DDIT
Sbjct: 123 DDIT 126
>gb|AAD13785.1| (AF118828) vacuolar H+-ATPase [Ilyanassa obsoleta]
Length = 124
Score = 190 bits (477), Expect = 3e-47
Identities = 90/124 (72%), Positives = 106/124 (84%)
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
MG+ E A FFK+ FEE G++E LFLNLA+DP IERIITPR+ALT AEY+A+ + V
Sbjct: 1 MGVNMEIARFFKQDFEENGSMENVSLFLNLANDPTIERIITPRIALTTAEYMAYQCEKHV 60
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPI 306
LVILTDM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G+ GSITQ+PI
Sbjct: 61 LVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPI 120
Query: 307 LTMP 310
LTMP
Sbjct: 121 LTMP 124
>gb|AAF08282.1|AF189780_1 (AF189780) vacuolar ATP synthase subunit B; v-ATPase subunit B;
v-type H+-ATPase subunit B [Callinectes sapidus]
Length = 118
Score = 189 bits (475), Expect = 6e-47
Identities = 88/118 (74%), Positives = 105/118 (88%)
Query: 196 FFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTN 255
FFK+ FEE G++E LFLNLA+DP IERIITPR+ALT AEYLA+ + VL+ILTDM++
Sbjct: 1 FFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTTAEYLAYQCEKHVLIILTDMSS 60
Query: 256 YCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDD 313
Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G++GSITQ+PILTMP+DD
Sbjct: 61 YAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRQGSITQIPILTMPNDD 118
>gb|AAF08283.1|AF189781_1 (AF189781) vacuolar ATP synthase subunit B; v-ATPase subunit B;
v-type H+-ATPase subunit B [Cancer irroratus]
Length = 120
Score = 187 bits (470), Expect = 2e-46
Identities = 88/119 (73%), Positives = 104/119 (86%)
Query: 192 EEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILT 251
E A FFK+ FEE G++E LFLNLA+DP IERIITPR+ALT AEYLA+ + VL+ILT
Sbjct: 2 ETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTTAEYLAYQCEKHVLIILT 61
Query: 252 DMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMP 310
DM++Y EALRE+SAAREEVPGRRG+PGYMYTDLATIYERAGR+ G++GSITQ+PILTMP
Sbjct: 62 DMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRQGSITQIPILTMP 120
>sp|O50341|ATPB_FERIS ATP SYNTHASE BETA CHAIN >gi|2687832|emb|CAA75783.1| (Y15789)
F1F0-ATPase beta subunit [Fervidobacterium islandicum]
Length = 472
Score = 169 bits (423), Expect = 7e-41
Identities = 121/411 (29%), Positives = 198/411 (47%), Gaps = 12/411 (2%)
Query: 6 KEYSTISKIYGPLMIV---EGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEG 62
K I +I GP++ V EG Y +V I ++G+K +V + + V
Sbjct: 4 KSVGKIVRIIGPVVDVKFQEGDLPDIYDALVVINPQTGKKLILEVEQLIGDNIVRTVAMD 63
Query: 63 TRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPV 122
+ D V+ V TGE +K PV +LGR+FN IG+PID E+ + +H +
Sbjct: 64 STDGLVRGLEVENTGEPIKAPVGRGVLGRMFNVIGEPIDEQGELKDIEYWPIHRPAPSMT 123
Query: 123 ARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAV 182
+ + ++TG+ ID + +G K+ F G+G+ L ++ R + E F+
Sbjct: 124 EQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMIRNIAI--EHHGFS- 180
Query: 183 VFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDY 242
+FA +G E N E G + VL ++P R ALT+AEY
Sbjct: 181 IFAGVGERTREGNDLYLEMTEAGVLNNTVLVFGQMNEPPGARFRVALTALTIAEYFRDVE 240
Query: 243 DMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSIT 302
VL+ + ++ + +A E+SA +P GY + TD+ + ER KKGSIT
Sbjct: 241 GRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTDMGELQERI--TSTKKGSIT 298
Query: 303 QMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKG 362
+ + +P DDIT P P T + IVLSR+L G+YP +D L S S+++ I
Sbjct: 299 SVQAIYVPADDITDPAPATTFTHLDATIVLSRQLAALGLYPAVDPLDSTSKILDPNI--- 355
Query: 363 RTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFER 413
++H ++A+ + + L+D++A++G E LSE DK ++ A + +R
Sbjct: 356 -VGKEHYEVARGVQEVLQRYKDLQDIIAILGMEELSEEDKLIVQRARKIQR 405
>sp|P80153|HRB6_XANCV PROBABLE ATP SYNTHASE HRPB6 >gi|398113|gb|AAA27605.1| (M99174) AA:
163-179 mononucleotide binding box A; 193-207 magnesium
binding domain; 244-256 mononucleotide binding box B
[Xanthomonas campestris] >gi|984883|gb|AAB08461.1|
(U33548) HrpB6 [Xanthomonas campestris pv. vesicatoria]
Length = 442
Score = 164 bits (412), Expect = 1e-39
Identities = 129/434 (29%), Positives = 210/434 (47%), Gaps = 21/434 (4%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEK-RKGQVLDARENLAIVQVF 60
+ + + Y + ++ G ++ V GV+ V+ GEV E+ G ++ +V+ +LA++ F
Sbjct: 19 LAVGRRYGKVVEVVGTMLKVAGVQ-VSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPF 77
Query: 61 EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120
L + T V G L VPV +LGR+ +G+G+P DG I + + +
Sbjct: 78 GELIGLS-RETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAIACDTWVPIQAQAPD 136
Query: 121 PVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF 180
P+ R + TG+ +DG+ TL GQ++ IF+ +G+ + L AR +
Sbjct: 137 PMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGT------QCD 190
Query: 181 AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
V +G E F + + R+V+ +D +IER + +AEY
Sbjct: 191 VNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFR- 249
Query: 241 DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGS 300
D ++VL+++ +T + A REI A E P RRG+P ++ +L + ERAG G+ GS
Sbjct: 250 DRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG--MGESGS 307
Query: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG 360
IT + DD + PI + I +G ++LSRE+ K YP IDVL SLSR+M +
Sbjct: 308 ITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIV- 366
Query: 361 KGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFE--REFVAQ 418
DH Q A +L A+ + LV V E +D E DR + R+F++Q
Sbjct: 367 ----PYDHSQAAGRLRRLLAKYNEVETLVQV--GEYRQGSDAVADEAIDRIDAIRDFLSQ 420
Query: 419 GYYEDRSIEETLDL 432
+ + E TL+L
Sbjct: 421 PTDQLSAYENTLEL 434
>sp|P49376|ATPB_KLULA ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECURSOR
>gi|1255776|gb|AAA96150.1| (U37764) F1 ATPase beta
subunit [Kluyveromyces lactis]
Length = 505
Score = 164 bits (412), Expect = 1e-39
Identities = 119/393 (30%), Positives = 188/393 (47%), Gaps = 16/393 (4%)
Query: 33 VEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRI 92
+EI+T G+ EN +GT L V+ +V TG + VPV + LGRI
Sbjct: 64 LEIDTPEGKLVLEVAQHLGENTVRTIAMDGTEGL-VRGENVSDTGAPISVPVGRETLGRI 122
Query: 93 FNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPI 152
N IG+PID I + R+ +H P V ++ + ++TGI +D + RG K+ +
Sbjct: 123 INVIGEPIDERGPINSKMRKPIHADPPLFVEQSTAAEVLETGIKVVDLLAPYARGGKIGL 182
Query: 153 FSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAI----- 207
F G+G+ ++ + + VF +G E N + +ETG I
Sbjct: 183 FGGAGVGKTVFIQELINN---IAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGD 239
Query: 208 ERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAR 267
+ L ++P R LT+AEY + VL+ + ++ + +A E+SA
Sbjct: 240 SKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALL 299
Query: 268 EEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITE 327
+P GY + TD+ + ER KKGS+T + + +P DD+T P P T +
Sbjct: 300 GRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLD 357
Query: 328 GQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRD 387
VLSR + GIYP +D L S SRL+ D G+ D QQ AY +SL+D
Sbjct: 358 ATTVLSRGISELGIYPAVDPLDSKSRLL-DAAVVGQEHYDVATQVQQTLQAY---KSLQD 413
Query: 388 LVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
++A++G + LSE DK +E A + +R F++Q +
Sbjct: 414 IIAILGMDELSEQDKLTVERARKIQR-FLSQPF 445
>sp|P35110|ATPB_CHLLI ATP SYNTHASE BETA CHAIN >gi|421345|pir||S30178 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Chlorobium limicola
>gi|299279|gb|AAB25774.1| (S56812) F-ATPase beta subunit
[Chlorobium limicola]
Length = 462
Score = 164 bits (411), Expect = 2e-39
Identities = 114/415 (27%), Positives = 205/415 (48%), Gaps = 16/415 (3%)
Query: 11 ISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQV----FEGTRDL 66
IS+I GP++ V+ +G +++ T + + VL+ +++L +V EGT L
Sbjct: 6 ISQIIGPVVDVDFAEG-QLPSILDALTVTRQDGSKLVLETQQHLGEERVRRIAMEGTDGL 64
Query: 67 DVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
V+ S + TG+ ++VPV ++LGR+ N +G PIDG ++ + +H +
Sbjct: 65 -VRGMSAKNTGKPIQVPVGEEVLGRMLNVVGDPIDGKGPVLSKKSYSIHRTAPKFDELST 123
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAA 186
+ +TGI ID + RG K +F G+G+ L ++ + +E+S VFA
Sbjct: 124 KAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINN---IAKEQSGFSVFAG 180
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
+G E N E+G I++ L ++P R L++AEY + V
Sbjct: 181 VGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEEGRDV 240
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPI 306
L+ + ++ + +A E+SA +P GY + T++ + +R KKGS+T +
Sbjct: 241 LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGELQDRITST--KKGSVTSVQA 298
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 366
+ +P DD+T P P + VLSR++ GIYP +D L S SR++ + +
Sbjct: 299 IYVPADDLTDPAPATAFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNV----IGD 354
Query: 367 DHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
DH AQ + + L+D++A++G + LS+ DK + A + +R F++Q ++
Sbjct: 355 DHYDTAQAVKQILQRYKDLQDIIAILGMDELSDDDKLVVARARKVQR-FLSQPFF 408
>pir||T10475 H+-transporting ATP synthase (EC 3.6.1.34) beta chain - Peptococcus
niger (fragment) >gi|587507|emb|CAA54205.1| (X76878)
ATPase beta-subunit [Peptococcus niger]
Length = 427
Score = 164 bits (410), Expect = 2e-39
Identities = 118/423 (27%), Positives = 202/423 (46%), Gaps = 21/423 (4%)
Query: 10 TISKIYGPLMIVEGVKGVA--YGEVVEIETESGEKRKGQVLDARENLAIVQVFEGT--RD 65
TI K+ GP++ VE G+ + I ++ + K D + L + + G R
Sbjct: 5 TIIKVVGPVVDVEFPSGLLPNINNALHISSDEQPEDKKTGHDFKVVLEVAEHLGGNIVRA 64
Query: 66 LDVKTTSVRFTG-------ETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAP 118
+ + +T G + VPV LGR+ N +G PID E+ E R +H +
Sbjct: 65 IAMSSTDGLMRGMVVTDQESPITVPVGDATLGRLMNVVGDPIDEAGEVPSETRWPIHRSA 124
Query: 119 LNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEE 178
V + ++ ++TGI +D + V+G K+ +F G+G+ L ++ R + E
Sbjct: 125 PTYVQQNPSKEILETGIKVVDLLCPYVKGGKIGLFGGAGVGKTVLIQELIRN---IAYEH 181
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
VFA +G E E+G I++ L ++P R+ LTVAEY
Sbjct: 182 GGYSVFAGVGERTREGKDLLVEMRESGVIDKTSLVFGQMNEPPGARMRIALTGLTVAEYF 241
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK 298
+ + VL+ + ++ + +A E+SA +P GY + T++ T+ ER K
Sbjct: 242 RDEQNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGTMQERI--TSTDK 299
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GSIT + + +P DD+T P P T + VL R + KGIYP +D L S SR++
Sbjct: 300 GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLERSISEKGIYPAVDPLASTSRILDPR 359
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
I E+H ++A+ + E R L+D+++++G + LS+ +K + A R ER F++Q
Sbjct: 360 I----VGEEHYEIARDVQEVLQEYRELQDIISILGMDELSDEEKLTVARARRIER-FLSQ 414
Query: 419 GYY 421
++
Sbjct: 415 SFF 417
>sp|P42467|ATPB_PEPNI ATP SYNTHASE BETA CHAIN
Length = 427
Score = 164 bits (410), Expect = 2e-39
Identities = 118/423 (27%), Positives = 202/423 (46%), Gaps = 21/423 (4%)
Query: 10 TISKIYGPLMIVEGVKGVA--YGEVVEIETESGEKRKGQVLDARENLAIVQVFEGT--RD 65
TI K+ GP++ VE G+ + I ++ + K D + L + + G R
Sbjct: 5 TIIKVVGPVVDVEFPSGLLPNINNALHISSDEQPEDKKTGHDFKVVLEVAEHLGGNIVRA 64
Query: 66 LDVKTTSVRFTG-------ETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAP 118
+ + +T G + VPV LGR+ N +G PID E+ E R +H +
Sbjct: 65 IAMSSTDGLMRGMVVTDQESPITVPVGDATLGRLMNVVGDPIDEAGEVPSETRWPIHRSA 124
Query: 119 LNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEE 178
V + ++ ++TGI +D + V+G K+ +F G+G+ L ++ R + E
Sbjct: 125 PTYVQQNPSKEILETGIKVVDLLCPYVKGGKIGLFGGAGVGKTVLIQELIRN---IAYEH 181
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
VFA +G E E+G I++ L ++P R+ LTVAEY
Sbjct: 182 GGYSVFAGVGERTREGKDLLVEMRESGVIDKTSLVFGQMNEPPGARMRIALTGLTVAEYF 241
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK 298
+ + VL+ + ++ + +A E+SA +P GY + T++ T+ ER K
Sbjct: 242 RDEQNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGTMQERI--TSTDK 299
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GSIT + + +P DD+T P P T + VL R + KGIYP +D L S SR++
Sbjct: 300 GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLERSISEKGIYPAVDPLASTSRILDPR 359
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
I E+H ++A+ + E R L+D+++++G + LS+ +K + A R ER F++Q
Sbjct: 360 I----VGEEHYEIARDVQEVLQEYRELQDIISILGMDELSDEEKLTVARARRIER-FLSQ 414
Query: 419 GYY 421
++
Sbjct: 415 SFF 417
>pir||B82114 flagellum-specific ATP synthase FliI VC2130 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9656681|gb|AAF95275.1| (AE004286) flagellum-specific
ATP synthase FliI [Vibrio cholerae]
Length = 439
Score = 163 bits (408), Expect = 4e-39
Identities = 114/371 (30%), Positives = 189/371 (50%), Gaps = 32/371 (8%)
Query: 30 GEVVEIETESGEKRKGQVLDARENL------AIVQVFEGTRDLDVKTTSVRFTGETLKVP 83
G + ++ET +GE V + +NL I+ V G + + T S +P
Sbjct: 44 GSLCKVETMNGEMEAEVVGFSGDNLFLMPSEQIIGVLPGAKVTPITTES--------GLP 95
Query: 84 VSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNT 143
V M++LGR+ +G+G P+DG I + R ++ P+NP+AR + + GI AI+G+ T
Sbjct: 96 VGMELLGRVIDGVGNPLDGLGPIYTDQRASLNAIPINPLARKPINEPLDVGIKAINGLLT 155
Query: 144 LVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEE 203
+ +GQ++ +F+GSG+ + + R G VV G+ E K+ EE
Sbjct: 156 VGKGQRIGLFAGSGVGKSVTLGMMTR-----GTTAQVVVV----GLIGERGREVKEFIEE 206
Query: 204 TGAIE---RAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEAL 260
++ R+V+ AD + R+ + ALT+AEY D + VL+++ +T + +A
Sbjct: 207 ILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFR-DQGLDVLLLMDSLTRFAQAQ 265
Query: 261 REISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPD 320
REI+ + E P +GYP ++ L + ERAG +GSIT + DD+ PI D
Sbjct: 266 REIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIAD 325
Query: 321 LTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYA 380
+ I +G IVLSRE+ G YP IDV S+SR+M T ++H +++ + +
Sbjct: 326 ASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQ-----ITTDEHLLMSKAVRQILS 380
Query: 381 EGRSLRDLVAV 391
R +DLV++
Sbjct: 381 VCRKNQDLVSI 391
>sp|P42465|ATPB_CHLVI ATP SYNTHASE BETA CHAIN >gi|560823|emb|CAA54200.1| (X76873) ATPase
beta-subunit [Chlorobium vibrioforme]
Length = 462
Score = 162 bits (406), Expect = 7e-39
Identities = 116/415 (27%), Positives = 206/415 (48%), Gaps = 16/415 (3%)
Query: 11 ISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQV----FEGTRDL 66
IS+I GP++ V+ +G +++ T + + VL+ +++L +V EGT L
Sbjct: 6 ISQIIGPVVDVDFPEG-QLPSILDALTVTRQDGSKLVLETQQHLGEERVRTISMEGTDGL 64
Query: 67 DVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
V+ SV TG ++ PV ++LGR+ N +G+PIDG + + +H + +
Sbjct: 65 -VRGMSVANTGRPIQAPVGAEVLGRMLNVVGEPIDGKGPVPSKKSYPIHRSAPKFDELST 123
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAA 186
+ +TGI ID + RG K +F G+G+ L ++ + +E+S VFA
Sbjct: 124 KAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINN---IAKEQSGYSVFAG 180
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
+G E N E+G I++ L ++P R L++AEY + V
Sbjct: 181 VGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEEGRDV 240
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPI 306
L+ + ++ + +A E+SA +P GY + T++ + +R + KKGS+T +
Sbjct: 241 LLFIDNIFRFTQAGAEVSALLGRMPSAVGYQPTLGTEMGELQDRI--VSTKKGSVTSVQA 298
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 366
+ +P DD+T P P + VLSR++ GIYP +D L S SR++ I G
Sbjct: 299 IYVPADDLTDPAPATAFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNI-IGNDHY 357
Query: 367 DHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
D Q +Q+ Y + L+D++A++G + LS+ DK + A + +R F++Q ++
Sbjct: 358 DTAQAVKQILQRY---KDLQDIIAILGMDELSDEDKLVVARARKVQR-FLSQPFF 408
>sp|P00830|ATPB_YEAST ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECURSOR
>gi|171110|gb|AAA34444.1| (M12082) F1-ATPase
beta-subunit precursor [Saccharomyces cerevisiae]
Length = 511
Score = 162 bits (405), Expect = 1e-38
Identities = 113/393 (28%), Positives = 188/393 (47%), Gaps = 16/393 (4%)
Query: 33 VEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRI 92
+EI+T G+ EN +GT L V+ V TG + VPV + LGRI
Sbjct: 70 LEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGL-VRGEKVLDTGGPISVPVGRETLGRI 128
Query: 93 FNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPI 152
N IG+PID I + R+ +H P + ++ + ++TGI +D + RG K+ +
Sbjct: 129 INVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGL 188
Query: 153 FSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAI----- 207
F G+G+ ++ + + VFA +G E N + +ETG I
Sbjct: 189 FGGAGVGKTVFIQELINN---IAKAHGGFSVFAGVGERTREGNDLYREMKETGVINLEGE 245
Query: 208 ERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAR 267
+ L ++P R LT+AEY + VL+ + ++ + +A E+SA
Sbjct: 246 SKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALL 305
Query: 268 EEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITE 327
+P GY + TD+ + ER KKGS+T + + +P DD+T P P + +
Sbjct: 306 GRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPSPSTSFAHLD 363
Query: 328 GQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRD 387
VLSR + GIYP +D L S SRL+ + ++H +A ++ +SL+D
Sbjct: 364 ASSVLSRGISELGIYPAVDPLDSKSRLLDAAV----VGQEHYDVASKVQETLQTYKSLQD 419
Query: 388 LVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
++A++G + LSE DK +E A + +R F++Q +
Sbjct: 420 IIAILGMDELSEQDKLTVERARKIQR-FLSQPF 451
>gi|6322581 F(1)F(0)-ATPase complex beta subunit, mitochondrial; Atp2p
[Saccharomyces cerevisiae] >gi|2144519|pir||PWBYB
H+-transporting ATP synthase (EC 3.6.1.34) beta chain
precursor - yeast (Saccharomyces cerevisiae)
>gi|1015845|emb|CAA89652.1| (Z49621) ORF YJR121w
[Saccharomyces cerevisiae] >gi|1483632|gb|AAC49475.1|
(U46215) F1-ATPase beta-subunit [Saccharomyces
cerevisiae]
Length = 511
Score = 161 bits (404), Expect = 1e-38
Identities = 113/393 (28%), Positives = 187/393 (46%), Gaps = 16/393 (4%)
Query: 33 VEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRI 92
+EI+T G+ EN +GT L V+ V TG + VPV + LGRI
Sbjct: 70 LEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGL-VRGEKVLDTGGPISVPVGRETLGRI 128
Query: 93 FNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPI 152
N IG+PID I + R+ +H P + ++ + ++TGI +D + RG K+ +
Sbjct: 129 INVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGL 188
Query: 153 FSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAI----- 207
F G+G+ ++ + + VF +G E N + +ETG I
Sbjct: 189 FGGAGVGKTVFIQELINN---IAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGE 245
Query: 208 ERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAR 267
+ L ++P R LT+AEY + VL+ + ++ + +A E+SA
Sbjct: 246 SKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALL 305
Query: 268 EEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITE 327
+P GY + TD+ + ER KKGS+T + + +P DD+T P P T +
Sbjct: 306 GRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLD 363
Query: 328 GQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRD 387
VLSR + GIYP +D L S SRL+ + ++H +A ++ +SL+D
Sbjct: 364 ATTVLSRGISELGIYPAVDPLDSKSRLLDAAV----VGQEHYDVASKVQETLQTYKSLQD 419
Query: 388 LVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
++A++G + LSE DK +E A + +R F++Q +
Sbjct: 420 IIAILGMDELSEQDKLTVERARKIQR-FLSQPF 451
>emb|CAA69911.1| (Y08620) F0/F1-ATPase [Helicobacter pylori]
Length = 434
Score = 161 bits (404), Expect = 1e-38
Identities = 126/386 (32%), Positives = 187/386 (47%), Gaps = 19/386 (4%)
Query: 3 EMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAREN---LAIVQV 59
E+S Y ++ KI ++ +G + G+VV+IE G + G V+ A +
Sbjct: 15 ELSPRYGSVKKIMPNIVYADGFNP-SVGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNF 73
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
EG R D V F E L PV ++LGR+ N +G+ ID + E V P+
Sbjct: 74 IEGARAGD----KVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGVLDYERLAPVITTPI 129
Query: 120 NPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEES 179
P+ R + G+ +IDG+ T +GQKL IF+GSG+ + L I R G
Sbjct: 130 APLKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITR-----GCLAP 184
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
V+ E F +K+ + G + VL + +DD + R A++VAEY
Sbjct: 185 IKVIALIGERGREIPEFIEKNLK--GDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFK 242
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VL I+ +T + A REI A E P +GYP + L + ERAG+ KG
Sbjct: 243 -NQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKG 300
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SIT + + DD++ PI D I +G IVLSREL GIYPPI++L S SR+ KD I
Sbjct: 301 SITAFFSVLVEGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDII 360
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSL 385
+ + + + ++LYA E L
Sbjct: 361 SESQNL--YARKFRRLYALLKENEML 384
>sp|O50550|ATPB_THEMA ATP SYNTHASE BETA CHAIN >gi|7436083|pir||D72231 ATP synthase F1,
subunit beta - Thermotoga maritima (strain MSB8)
>gi|2687836|emb|CAA75784.1| (Y15792) F1F0-ATPase beta
subunit [Thermotoga maritima]
>gi|4982182|gb|AAD36677.1|AE001805_2 (AE001805) ATP
synthase F1, subunit beta [Thermotoga maritima]
Length = 468
Score = 161 bits (404), Expect = 1e-38
Identities = 112/393 (28%), Positives = 191/393 (48%), Gaps = 10/393 (2%)
Query: 29 YGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDM 88
Y + + ++G+K +V + + V + D K V TG + PV ++
Sbjct: 30 YNALEVVNPQTGQKVVLEVEQLIGDGVVRTVAMDSTDGLTKGLEVVDTGAPITAPVGKEV 89
Query: 89 LGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQ 148
LGRI N IG+P+D EI ++R +H V ++ + ++TGI ID + +G
Sbjct: 90 LGRILNVIGEPVDEAGEIKAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKGG 149
Query: 149 KLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE 208
K+ F G+G+ L ++ R + E + F+ VFA +G E N +E+G +
Sbjct: 150 KIGFFGGAGVGKTVLVMELIRNIAI--EHKGFS-VFAGVGERTREGNELWLEMQESGVLG 206
Query: 209 RAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAARE 268
VL ++P R ALT+AEY VL+ + ++ + +A E+SA
Sbjct: 207 NTVLVFGQMNEPPGARFRVALTALTIAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLG 266
Query: 269 EVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEG 328
+P GY + TD+ + ER R +GSIT + + +P DDIT P P T +
Sbjct: 267 RMPSAVGYQPTLATDMGELQERITSTR--RGSITSVQAIYVPADDITDPAPATTFAHLDA 324
Query: 329 QIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDL 388
+VLSR + G+YP +D L S S+++ I +H ++A+ + + L+D+
Sbjct: 325 TVVLSRRIAELGLYPAVDPLDSSSKILDPAI----VGREHYEVARGVQEVLQRYKDLQDI 380
Query: 389 VAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
+A++G E LS DK + A R +R F++Q ++
Sbjct: 381 IAILGVEELSPEDKLVVHRARRIQR-FLSQPFH 412
>gb|AAF61281.1| (AF026197) HrpB6 [Xanthomonas oryzae pv. oryzae]
>gi|9711583|dbj|BAB07852.1| (AB045311) HrpB6
[Xanthomonas oryzae pv. oryzae]
Length = 442
Score = 161 bits (404), Expect = 1e-38
Identities = 127/440 (28%), Positives = 207/440 (46%), Gaps = 35/440 (7%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEK-RKGQVLDARENLAIVQVF 60
+ + Y + ++ G ++ V GV+ V+ GEV E+ G ++ +V+ +LA++ F
Sbjct: 19 LAFGRRYGKVVEVVGTMLKVAGVQ-VSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPF 77
Query: 61 EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120
L + T V G L VPV +LGR+ +G+G+P DG I + + +
Sbjct: 78 GELIGLS-RETRVIGLGRPLAVPVGAALLGRVLDGLGEPSDGQGAIACDTWVPIQAQAPD 136
Query: 121 PVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF 180
P+ R + TG+ +DG+ TL GQ++ IF+ +G+ + L AR +
Sbjct: 137 PMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGT------QCD 190
Query: 181 AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
V +G E F + + R+V+ +D +IER + +AEY
Sbjct: 191 VNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFR- 249
Query: 241 DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGS 300
D ++VL+++ +T + A REI A E P RRG+P ++ +L + ERAG G+ GS
Sbjct: 250 DRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG--MGESGS 307
Query: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG 360
IT + DD + PI + I +G ++LSRE+ K YP IDVL SLSR+M +
Sbjct: 308 ITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIV- 366
Query: 361 KGRTREDHPQLAQQLYAAYAEGRSLRDLVAV---------VGEEALSETDKKYLEFADRF 411
DH Q A +L A+ + LV V V +EA++ D
Sbjct: 367 ----PSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAINRIDA--------- 413
Query: 412 EREFVAQGYYEDRSIEETLD 431
R+F++Q + E TL+
Sbjct: 414 IRDFLSQPTDQLSDYESTLE 433
>sp|O07025|FLII_HELPY FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436102|pir||D64697 flagellar
export protein ATP synthase - Helicobacter pylori
(strain 26695) >gi|2314594|gb|AAD08462.1| (AE000642)
flagellar export protein ATP synthase (fliI)
[Helicobacter pylori 26695]
Length = 434
Score = 161 bits (403), Expect = 2e-38
Identities = 121/364 (33%), Positives = 179/364 (48%), Gaps = 17/364 (4%)
Query: 3 EMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAREN---LAIVQV 59
++S Y ++ KI ++ +G + G+VV+IE G + G V+ A +
Sbjct: 15 DLSPRYGSVKKIMPNIVYADGFNP-SVGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNF 73
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
EG R D V F E L PV ++LGR+ N +G+ ID + E V P+
Sbjct: 74 IEGARAGD----KVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLAPVITTPI 129
Query: 120 NPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEES 179
P+ R + G+ +IDG+ T +GQKL IF+GSG+ + L I R G
Sbjct: 130 APLKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITR-----GCLAP 184
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
V+ E F +K+ + G + VL + +DD + R A++VAEY
Sbjct: 185 IKVIALIGERGREIPEFIEKNLK--GDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFK 242
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VL I+ +T + A REI A E P +GYP + L + ERAG+ KG
Sbjct: 243 -NQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKG 300
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SIT + + DD++ PI D T I +G IVLSREL GIYPPI++L S SR+ KD I
Sbjct: 301 SITAFFSVLVEGDDLSDPIADQTRSILDGHIVLSRELTDYGIYPPINILNSASRVAKDII 360
Query: 360 GKGR 363
+ +
Sbjct: 361 SESQ 364
>sp|Q9ZJJ3|FLII_HELPJ FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436101|pir||D71823
flagellum-specific ATP synthase - Helicobacter pylori
(strain J99) >gi|4155920|gb|AAD06888.1| (AE001554)
FLAGELLUM-SPECIFIC ATP SYNTHASE [Helicobacter pylori
J99]
Length = 434
Score = 159 bits (398), Expect = 6e-38
Identities = 121/364 (33%), Positives = 178/364 (48%), Gaps = 17/364 (4%)
Query: 3 EMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAREN---LAIVQV 59
E+S Y ++ KI ++ +G + G+VV+IE G + G V+ A +
Sbjct: 15 ELSPRYGSVKKIMPNIVYADGFNP-SVGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNF 73
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
EG R D V F E L PV ++LGR+ N +G+ ID + E V P+
Sbjct: 74 IEGARAGD----KVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGVLDYERLAPVITTPI 129
Query: 120 NPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEES 179
P+ R + G+ +IDG+ T +GQKL IF+GSG+ + L I R G
Sbjct: 130 APLKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITR-----GCLAP 184
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
V+ E F +K+ + G + VL + +DD + R A++VAEY
Sbjct: 185 IKVIALIGERGREIPEFIEKNLK--GDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFK 242
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VL I+ +T + A REI A E P +GYP + L + ERAG+ KG
Sbjct: 243 -NQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKG 300
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SIT + + DD++ PI D I +G IVLSREL GIYPPI++L S SR+ KD I
Sbjct: 301 SITAFFSVLVEGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDII 360
Query: 360 GKGR 363
+ +
Sbjct: 361 SESQ 364
>sp|P42470|ATPB_WOLSU ATP SYNTHASE BETA CHAIN >gi|587588|emb|CAA54207.1| (X76880) ATPase
beta-subunit [Wolinella succinogenes]
Length = 467
Score = 159 bits (397), Expect = 8e-38
Identities = 111/415 (26%), Positives = 205/415 (48%), Gaps = 14/415 (3%)
Query: 11 ISKIYGPLMIVEGVKGV-AYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD-- 67
I+++ GP++ V+ + A E +++ + K VL+ ++ +V D+
Sbjct: 5 ITQVMGPVVDVDFDSYLPAINEALDVNYDIEGHPKKLVLEVAAHIGDSRVRTIAMDMTEG 64
Query: 68 -VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
+ T V G++++VPV +LGRIFN +G IDGG E+ + +H ++
Sbjct: 65 LTRGTKVVARGKSIEVPVGEQVLGRIFNVVGDVIDGGDELKEPVKWSIHRTAPTFENQST 124
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAA 186
+ +TGI +D + +G K+ +F G+G+ + ++ + S VFA
Sbjct: 125 KTEMFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVVIMELIHNVAF---KHSGYSVFAG 181
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
+G E N +E+G +++ L ++P R LT+AEY + + V
Sbjct: 182 VGERTREGNDLYHEMKESGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 241
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPI 306
L+ + ++ Y ++ E+SA +P GY + +++ + ER KKGSIT +
Sbjct: 242 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLASEMGKLQERITST--KKGSITSVQA 299
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 366
+ +P DD+T P P + VL+R++ KGIYP +D L S SR++ + E
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILDPQV----VGE 355
Query: 367 DHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
DH + A + + + L+D++A++G + LSE DK+ +E A R E+ F++Q ++
Sbjct: 356 DHYKTATGVQQVLQKYKDLQDIIAILGMDELSEEDKRVVERARRIEK-FLSQPFF 409
>gb|AAB93498.1| (U75584) ATPase [Helicobacter pylori]
Length = 434
Score = 159 bits (397), Expect = 8e-38
Identities = 120/364 (32%), Positives = 178/364 (47%), Gaps = 17/364 (4%)
Query: 3 EMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAREN---LAIVQV 59
++S Y ++ KI ++ +G + G+VV+IE G + G V+ A +
Sbjct: 15 DLSPRYGSVKKIMPNIVYADGFNP-SVGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNF 73
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
EG R D V F E L PV ++LGR+ N +G+ ID + E V P+
Sbjct: 74 IEGARAGD----KVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLAPVITTPI 129
Query: 120 NPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEES 179
P+ R + G+ +IDG+ T +GQKL IF+GSG+ + L I R G
Sbjct: 130 APLKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITR-----GCLAP 184
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
V+ E F +K+ + G + VL + +DD + R A++VAEY
Sbjct: 185 IKVIALIGERGREIPEFIEKNLK--GDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFK 242
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
+ + VL I+ +T + A REI A E P +GYP + L + ERAG+ KG
Sbjct: 243 -NQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKG 300
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SIT + + DD++ PI D I +G IVLSREL GIYPPI++L S SR+ KD I
Sbjct: 301 SITAFFSVLVEGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDII 360
Query: 360 GKGR 363
+ +
Sbjct: 361 SESQ 364
>gb|AAD15915.1| (AF069392) polar flagellum-specific ATP synthase FliI [Vibrio
parahaemolyticus]
Length = 439
Score = 158 bits (395), Expect = 1e-37
Identities = 113/363 (31%), Positives = 184/363 (50%), Gaps = 16/363 (4%)
Query: 30 GEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD-VKTTSVRFTGETLKVPVSMDM 88
G + +ET SG V + +NL ++ + T L K T + T E +PV M++
Sbjct: 44 GSLCLVETMSGHMEAEVVGFSGDNLYLMPSEQITGILPGAKVTPL--TSEA-GLPVGMEL 100
Query: 89 LGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQ 148
LGR+ +G+G P+DG I E R + P+NP+AR + + G+ AI+G+ T+ +GQ
Sbjct: 101 LGRVIDGVGNPLDGLGPIYTEHRASFNAEPINPLARKPISEPLDVGLKAINGLLTVGKGQ 160
Query: 149 KLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE 208
++ +F+GSG+ + + R VV +G E F +
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQ------VVVVGLIGERGREVKEFIEEILGEDGRR 214
Query: 209 RAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAARE 268
R+V+ AD + R+ + ALT+AEY D + VL+++ +T + +A REI+ +
Sbjct: 215 RSVVVAAPADASPLMRLKGCQTALTIAEYFR-DQGLDVLLLMDSLTRFAQAQREIALSVG 273
Query: 269 EVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEG 328
E P +GYP ++ L + ERAG ++GSIT + DD+ PI D + I +G
Sbjct: 274 EPPATKGYPPSVFAKLPALVERAGNGSPEQGSITAFFTVLTEGDDLQDPIADASRAILDG 333
Query: 329 QIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDL 388
IVLSRE+ G YP IDV S+SR+M T E+H +++ + + R +DL
Sbjct: 334 HIVLSREMADAGHYPAIDVEKSVSRVMPQ-----ITTEEHVLMSKAVRQVLSICRKNQDL 388
Query: 389 VAV 391
V++
Sbjct: 389 VSI 391
>sp|P22068|ATPB_SCHPO ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECURSOR
>gi|101037|pir||S17211 H+-transporting ATP synthase (EC
3.6.1.34) beta chain precursor [similarity] - fission
yeast (Schizosaccharomyces pombe)
>gi|6433997|emb|CAB60704.1| (AL132798) ATP synthase beta
chain, mitochondrial precursor (EC 3.6.1.34)
[Schizosaccharomyces pombe]
Length = 525
Score = 157 bits (393), Expect = 2e-37
Identities = 113/374 (30%), Positives = 178/374 (47%), Gaps = 16/374 (4%)
Query: 52 ENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDR 111
EN +GT L V+ T+V TG + +PV LGRI N IG+P+D I
Sbjct: 102 ENTVRTIAMDGTEGL-VRGTAVIDTGSPISIPVGPGTLGRIMNVIGEPVDERGPIKAVKY 160
Query: 112 RDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQA 171
+H + ++ + ++TGI +D + RG K+ +F G+G+ ++
Sbjct: 161 SPIHADAPSFEEQSTTPEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINN- 219
Query: 172 KVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-----RAVLFLNLADDPAIERII 226
+ + VF +G E N + +ETG I+ +A L ++P R
Sbjct: 220 --IAKAHGGYSVFTGVGERTREGNDLYREMQETGVIKLEGESKAALVFGQMNEPPGARAR 277
Query: 227 TPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLAT 286
LTVAEY VL+ + ++ + +A E+SA +P GY + TD+
Sbjct: 278 VALTGLTVAEYFRDIEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGA 337
Query: 287 IYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPID 346
+ ER KKGSIT + + +P DD+T P P T + VLSR + GIYP +D
Sbjct: 338 MQERITTT--KKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSISELGIYPAVD 395
Query: 347 VLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLE 406
L S SR+M I E+H LA + E +SL+D++A++G + LSE DK +E
Sbjct: 396 PLDSKSRMMDPRI----LGEEHYNLAGSVQQMLQEYKSLQDIIAILGMDELSEADKLTVE 451
Query: 407 FADRFEREFVAQGY 420
A + +R F++Q +
Sbjct: 452 RARKVQR-FLSQPF 464
>pir||A83509 flagellum-specific ATP synthase FliI PA1104 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9947021|gb|AAG04493.1|AE004540_13 (AE004540)
flagellum-specific ATP synthase FliI [Pseudomonas
aeruginosa]
Length = 451
Score = 157 bits (393), Expect = 2e-37
Identities = 108/352 (30%), Positives = 174/352 (48%), Gaps = 12/352 (3%)
Query: 78 ETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISA 137
+T ++P+ M MLGR+ +G G+ +DG + ED + G +NP+ R + + GI +
Sbjct: 99 DTGRLPMGMSMLGRVLDGAGRALDGKGGMRAEDWVPMDGPTINPLKRHPISEPLDVGIRS 158
Query: 138 IDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFF 197
I+G+ T+ RGQ+L +F+G+G+ + L + R + + +V +G E F
Sbjct: 159 INGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTR------ADIIVVGLIGERGREVKEF 212
Query: 198 KKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYC 257
++R+V+ + ADD + R+ + +AEY D VL+++ +T Y
Sbjct: 213 IDEILGEEGLKRSVVVASPADDAPLMRLRAAQYCTRIAEYFR-DKGKNVLLLMDSLTRYA 271
Query: 258 EALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHP 317
+A REI+ A E P +GYP ++ L + ERAG GSIT + DD P
Sbjct: 272 QAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDP 331
Query: 318 IPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYA 377
I D + +G VLSR L +G YP ID+ S+SR+M + R+ Q +QL++
Sbjct: 332 IADAARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVVEAEHLRD--AQRFKQLWS 389
Query: 378 AYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEET 429
Y + R L + A V ETD F R+F+ QG E S+ E+
Sbjct: 390 RYQQSRDLISVGAYVA-GGDPETDLAIARFP--VMRQFLRQGLDESESLAES 438
>pir||S61858 hrpE protein - Pseudomonas solanacearum >gi|6066711|emb|CAB58257.1|
(AJ245811) HrpE protein [Ralstonia solanacearum]
>gi|1097290|prf||2113360R hrpE gene [Ralstonia
solanacearum]
Length = 439
Score = 156 bits (391), Expect = 4e-37
Identities = 116/380 (30%), Positives = 188/380 (48%), Gaps = 20/380 (5%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEI-ETESGEKRKGQVLDARENLAIVQVFEGTR 64
+ + + ++ G L+ V GV V GE+ + E + ++G+V+ E+ A+V F G
Sbjct: 21 RRFGKVVEVSGTLLRVGGVD-VRLGELCTLTEADGTVMQEGEVVGFSEHFALVAPFSGVT 79
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
L ++T V +G L V + +LGR+ +G G+P DGGP + + V +P+ R
Sbjct: 80 GLS-RSTRVVPSGRALSVGIGPGLLGRVLDGHGRPADGGPPLDVVEYVPVFANAPDPMTR 138
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVF 184
+ TG+ IDG+ TL GQ++ IF+ +G+ + L AR G E V+
Sbjct: 139 RLVEHPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLMGMFAR-----GTECDVNVIV 193
Query: 185 AAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDM 244
E F ++ E G + R+V+ +D A+ER + VAEY D +
Sbjct: 194 LIGERGREVREFIEQILGEEG-MRRSVVVCATSDRTAVERAKAAYVGTAVAEYFR-DQGL 251
Query: 245 QVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQM 304
+VL+++ +T + A REI A E P RRG+P ++ +L + ERAG GSIT
Sbjct: 252 RVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG--MSAAGSITAH 309
Query: 305 PILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRT 364
+ D+ P+ + I +G ++LSR++ + YP ID+L SLSR+M + +
Sbjct: 310 YTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILNSLSRVMTQVMPR--- 366
Query: 365 REDHPQLA---QQLYAAYAE 381
DH A +QL A Y E
Sbjct: 367 --DHCDAAGRMRQLLAKYNE 384
>gi|10955560 ATPase YscN [Yersinia enterocolitica]
>gi|732261|sp|P40290|YSCN_YEREN PROBABLE ATP SYNTHASE
YSCN (YOPS SECRETION ATPASE) >gi|1073735|pir||A55520
yscN protein - Yersinia enterocolitica
>gi|4324347|gb|AAD16824.1| (AF102990) ATPase YscN
[Yersinia enterocolitica]
Length = 439
Score = 155 bits (389), Expect = 7e-37
Identities = 119/364 (32%), Positives = 183/364 (49%), Gaps = 18/364 (4%)
Query: 71 TSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDF 130
T V TG +V V +LG++ +G+G+P DGG P V+ P++R
Sbjct: 86 TEVSPTGTMHQVGVGEHLLGQVLDGLGQPFDGGHLPEPAAWYPVYQDAPAPMSRKLITTP 145
Query: 131 IQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGIT 190
+ GI IDG+ T GQ++ IF+ +G + L A + R A+V V A +G
Sbjct: 146 LSLGIRVIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEV------DVTVLALIGER 199
Query: 191 YEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVIL 250
E F +S + +AVL + +D P++ER +A ++AEY D +VL+++
Sbjct: 200 GREVREFIESDLGEEGLRKAVLVVATSDRPSMERAKAGFVATSIAEYFR-DQGKRVLLLM 258
Query: 251 TDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMP 310
+T + A REI A E P RRGYP ++ L + ERAG+ KGSIT + + +
Sbjct: 259 DSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQ--SSKGSITALYTVLVE 316
Query: 311 DDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQ 370
DD+T P+ D T I +G I+LSR+L YP IDVL S SR+M + K +H
Sbjct: 317 GDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSK-----EHKT 371
Query: 371 LAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFE--REFVAQGYYEDRSIEE 428
A L A+ + +L+ +GE + DK+ + +R R ++ QG +E E
Sbjct: 372 WAGDLRRLLAKYEEV-ELLLQIGEYQKGQ-DKEADQAIERIGAIRGWLCQGTHELSHFNE 429
Query: 429 TLDL 432
TL+L
Sbjct: 430 TLNL 433
>gi|10955631 Yops secretion ATPase YscN homolog [Yersinia pestis]
>gi|10955791|ref|NP_047598.1| Yops secretion protein
[Yersinia pestis] >gi|11266663|pir||T43585 yopS
secretion protein - Yersinia pestis plasmid pCD1
>gi|2996241|gb|AAC62564.1| (AF053946) Yops secretion
ATPase YscN homolog [Yersinia pestis]
>gi|3822071|gb|AAC69791.1| (AF074612) Yops secretion
protein [Yersinia pestis] >gi|5832460|emb|CAB54917.1|
(AL117189) putative Yops secretion ATP synthase
[Yersinia pestis]
Length = 439
Score = 155 bits (389), Expect = 7e-37
Identities = 119/364 (32%), Positives = 183/364 (49%), Gaps = 18/364 (4%)
Query: 71 TSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDF 130
T V TG +V V +LG++ +G+G+P DGG P V+ P++R
Sbjct: 86 TEVSPTGTMHQVGVGEHLLGQVLDGLGQPFDGGHLPEPAAWYPVYQDAPAPMSRKLITTP 145
Query: 131 IQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGIT 190
+ GI IDG+ T GQ++ IF+ +G + L A + R A+V V A +G
Sbjct: 146 LSLGIRVIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEV------DVTVLALIGER 199
Query: 191 YEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVIL 250
E F +S + +AVL + +D P++ER +A ++AEY D +VL+++
Sbjct: 200 GREVREFIESDLGEEGLRKAVLVVATSDRPSMERAKAGFVATSIAEYFR-DQGKRVLLLM 258
Query: 251 TDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMP 310
+T + A REI A E P RRGYP ++ L + ERAG+ KGSIT + + +
Sbjct: 259 DSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQ--SSKGSITALYTVLVE 316
Query: 311 DDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQ 370
DD+T P+ D T I +G I+LSR+L YP IDVL S SR+M + K +H
Sbjct: 317 GDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSK-----EHKT 371
Query: 371 LAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFE--REFVAQGYYEDRSIEE 428
A L A+ + +L+ +GE + DK+ + +R R ++ QG +E E
Sbjct: 372 WAGDLRRLLAKYEEV-ELLLQIGEYQKGQ-DKEADQAIERMGAIRGWLCQGTHELSHFNE 429
Query: 429 TLDL 432
TL+L
Sbjct: 430 TLNL 433
>sp|P40291|YSCN_YERPS PROBABLE ATP SYNTHASE YSCN (YOPS SECRETION ATPASE)
>gi|388096|gb|AAA20119.1| (L23522) yscN [Yersinia
pseudotuberculosis] >gi|392946|gb|AAA73398.1| (U00998)
YscN [Yersinia pseudotuberculosis]
Length = 439
Score = 153 bits (383), Expect = 4e-36
Identities = 120/365 (32%), Positives = 184/365 (49%), Gaps = 20/365 (5%)
Query: 71 TSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDF 130
T V TG +V V +LG++ +G+G+P DGG P V+ P++R
Sbjct: 86 TEVSPTGTMHQVGVGEHLLGQVLDGLGQPFDGGHLPEPAAWYPVYQDAPAPMSRKLITTP 145
Query: 131 IQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGIT 190
+ GI IDG+ T GQ++ IF+ +G + L A + R A+V V A +G
Sbjct: 146 LSLGIRVIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEV------DVTVLALIGER 199
Query: 191 YEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVIL 250
E F +S + +A L + +D P++ER +A ++AEY D +VL+++
Sbjct: 200 GPEVREFIESDLGEEGLRKAFLVVATSDRPSMERAKAGFVATSIAEYFR-DQGKRVLLLM 258
Query: 251 TDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMP 310
+T + A REI A E P RRGYP ++ L + ERAG+ KGSIT + + +
Sbjct: 259 DSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQ--SSKGSITALYTVLVE 316
Query: 311 DDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGK-GRTREDHP 369
DD+T P+ D T I +G I+LSR+L YP IDVL S SR+M + K +T H
Sbjct: 317 GDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGH- 375
Query: 370 QLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFE--REFVAQGYYEDRSIE 427
++L A Y E +L+ +GE + DK+ + +R R ++ QG +E
Sbjct: 376 --LRRLLAKYEE----VELLLQIGEYQKGQ-DKEADQAIERMGAIRGWLCQGTHELSHFN 428
Query: 428 ETLDL 432
ETL+L
Sbjct: 429 ETLNL 433
>dbj|BAB06174.1| (AP001515) flagellar-specific ATP synthase [Bacillus halodurans]
Length = 437
Score = 153 bits (383), Expect = 4e-36
Identities = 113/388 (29%), Positives = 194/388 (49%), Gaps = 18/388 (4%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIET-ESGEKRKGQVLDARENLAIVQVFEGTR 64
K Y ++++ G + +G + + GE+ I + G K +V+ +E ++ GT
Sbjct: 17 KWYGKVTRVIGLTIEAKGPQA-SIGELCYILVGKQGTKVMAEVVGFKEERVLLMPLNGTA 75
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRD--VHGAPLNPV 122
++ + V TG L+V V ++G + +G G+P+ G E +P P NP+
Sbjct: 76 EI-APGSLVEGTGRPLQVKVGYSLIGHVIDGCGRPLTG--EALPNGLTPYPTDNPPPNPI 132
Query: 123 ARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAV 182
+R ++ + G+ AIDG+ T+ +GQ++ IF+GSG+ + L A +A+ A + +
Sbjct: 133 SRPRIKEAMHLGVRAIDGLLTVGKGQRVGIFAGSGVGKSTLLAMLAKNAAA---DLNIIA 189
Query: 183 VFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDY 242
+ G E +F ++ E G + R+++ + +D PA+ RI A +AEY D
Sbjct: 190 LIGERG--REVKDFIERDLGEDG-LRRSIIVVATSDQPALMRIKGAMTATALAEYFR-DQ 245
Query: 243 DMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSIT 302
+ V +++ +T + A REI A E P +GY ++ L + ERAG KGSIT
Sbjct: 246 GLHVNLMMDSVTRFAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERAGT--NGKGSIT 303
Query: 303 QMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKG 362
+ + DD+ PI D I +G VL REL KG YP I++L S+SR+M D +
Sbjct: 304 GFYTVLVDGDDLNEPISDTVRGILDGHFVLDRELANKGHYPAINILKSVSRVMNDIVTDE 363
Query: 363 RTREDHPQLAQQLYAAYAEGRSLRDLVA 390
+ R + + L + Y E L ++ A
Sbjct: 364 QKRA--AEHVRSLLSVYKESEDLINIGA 389
>sp|P50002|ATPB_ACEWO ATP SYNTHASE BETA CHAIN, SODIUM ION SPECIFIC (NA(+)-TRANSLOCATING
ATPASE BETA CHAIN) >gi|2118189|pir||I39748
Na+-transporting ATP synthase (EC 3.6.1.-) beta chain -
Acetobacterium woodii >gi|501149|gb|AAA79908.1| (U10505)
F1FO ATPase beta subunit [Acetobacterium woodii]
>gi|1096934|prf||2113197B Na ATPase:ISOTYPE=beta
[Acetobacterium woodii]
Length = 466
Score = 153 bits (382), Expect = 5e-36
Identities = 105/348 (30%), Positives = 169/348 (48%), Gaps = 24/348 (6%)
Query: 76 TGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR------- 128
TG ++VPV LGR+FN +G+PIDG P D +DV ++P+ R P
Sbjct: 74 TGSAIQVPVGKATLGRMFNVLGEPIDGKPF----DTKDV---VMHPIHRHPPSFEEQQTQ 126
Query: 129 -DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAM 187
+ +TGI +D + VRG K+ +F G+G+ L ++ + + VFA +
Sbjct: 127 PEMFETGIKVVDLICPYVRGGKIGLFGGAGVGKTVLIQELINN---IATQHGGLSVFAGV 183
Query: 188 GITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVL 247
G E N E+G I + L ++P R+ LT+AEY D VL
Sbjct: 184 GERTREGNDLYYEMMESGVINKTALCFGQMNEPPGARMRIALAGLTMAEYFRDDEGQDVL 243
Query: 248 VILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPIL 307
+ + ++ + +A E+SA +P GY + T++ + ER KGSIT + +
Sbjct: 244 LFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITST--SKGSITSVQAV 301
Query: 308 TMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRED 367
P DD+T P P T + VLSR + KGIYP +D L S SR++ I ++
Sbjct: 302 YDPADDLTDPAPATTFAHLDATTVLSRAITEKGIYPAVDPLDSTSRILDPKI----VGQE 357
Query: 368 HPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREF 415
H + A+++ + L+D++A++G + LS+ DK + A + ER F
Sbjct: 358 HYETAREVQEILQRYKELQDIIAILGMDELSDADKITVSRARKVERLF 405
>sp|P55717|Y4YI_RHISN PROBABLE ATP SYNTHASE Y4YI >gi|2182734|gb|AAB91948.1| (AE000107)
Y4yI; HrcN homolog [Rhizobium sp. NGR234]
Length = 451
Score = 152 bits (381), Expect = 6e-36
Identities = 118/399 (29%), Positives = 189/399 (46%), Gaps = 17/399 (4%)
Query: 36 ETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNG 95
+T +G + +V+ +N ++ G L + V TG +VP+ D+LGR+ +
Sbjct: 64 DTRTGLSLEAEVIGLLDNGVLLTPIGGLAGLSSRAEVVS-TGRMREVPIGPDLLGRVIDS 122
Query: 96 IGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSG 155
+P+DG E+ + R +HG NP+ R G+ A+DG+ T GQ++ I+
Sbjct: 123 RCRPLDGKGEVKTTEVRPLHGRAPNPMTRRMVERPFPLGVRALDGLLTCGEGQRIGIYGE 182
Query: 156 SGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLN 215
G + L +QI + A + V+ A +G E F + + RA++ +
Sbjct: 183 PGGGKSTLISQIVKGA------AADVVIVALIGERGREVREFVERHLGEEGLRRAIVVVE 236
Query: 216 LADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRG 275
+D A ER MA +AEY + ++V ++L +T +C A+REI A E P RRG
Sbjct: 237 TSDRSATERAQCAPMATALAEYFR-EQGLRVALLLDSLTRFCRAMREIGLAAGEPPTRRG 295
Query: 276 YPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRE 335
+P ++ L + ERAG G++GSIT + + D PI + + I +G IVLSR
Sbjct: 296 FPPSVFAALPGLLERAG--LGERGSITAFYTVLVEGDGTGDPIAEESRGILDGHIVLSRA 353
Query: 336 LHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEE 395
L + +P IDVL S SR+M + + T + L A YAE L + V +
Sbjct: 354 LAARSHFPAIDVLQSRSRVMDAVVSE--THRKAASFFRDLLARYAECEFLIN-VGEYKQG 410
Query: 396 ALSETDKKYLEFADRFEREFVAQGYYEDRSIEETLDLGW 434
TD+ + +EF+ Q E EET +GW
Sbjct: 411 GDPLTDRAVASIGEL--KEFLRQSEDEVSDFEET--VGW 445
>sp|Q9ZK81|ATPB_HELPJ ATP SYNTHASE BETA CHAIN >gi|7436085|pir||D71855 ATP synthase F1,
chain beta - Helicobacter pylori (strain J99)
>gi|4155651|gb|AAD06639.1| (AE001533) ATP synthase F1,
subunit beta [Helicobacter pylori J99]
Length = 469
Score = 152 bits (381), Expect = 6e-36
Identities = 111/415 (26%), Positives = 204/415 (48%), Gaps = 14/415 (3%)
Query: 11 ISKIYGPLMIVEGVKGV-AYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD-- 67
I ++ GP++ VE + A E ++I E +K VL+ +L +V D+
Sbjct: 8 IIQVLGPVVDVEFESYLPAIFEALDINFEVNGTQKALVLEVAAHLGGNRVRAIAMDMTEG 67
Query: 68 -VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
V+ +V+ G+ ++VPV ++LGRIFN +G+ ID + P +H + ++
Sbjct: 68 LVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAPSFEQQST 127
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAA 186
+ +TGI ID + +G K+ +F G+G+ + ++ + + + VFA
Sbjct: 128 KTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHN---VAYKHNGYSVFAG 184
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
+G E N +E G +++ L ++P R LT+AEY + + V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPI 306
L+ + ++ Y ++ E+SA +P GY + ++ + ER K GSIT +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIAST--KNGSITSVQA 302
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 366
+ +P DD+T P P + VL+R++ KGIYP +D L S SR++ + E
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQM----IGE 358
Query: 367 DHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
H ++A + + + L+D++A++G + LSE DKK +E A + E+ F++Q ++
Sbjct: 359 KHYEIATGIQQVLQKYKDLQDIIAILGLDELSEEDKKTVERARKIEK-FLSQPFF 412
>gb|AAB61298.1| (AF004014) F1F0-ATPase beta subunit [Helicobacter pylori]
Length = 469
Score = 152 bits (380), Expect = 8e-36
Identities = 111/415 (26%), Positives = 204/415 (48%), Gaps = 14/415 (3%)
Query: 11 ISKIYGPLMIVEGVKGV-AYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD-- 67
I ++ GP++ VE + A E ++I E +K VL+ +L +V D+
Sbjct: 8 IIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMTEG 67
Query: 68 -VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
V+ +V+ G+ ++VPV ++LGRIFN +G+ ID + P +H + ++
Sbjct: 68 LVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAPSFEQQST 127
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAA 186
+ +TGI ID + +G K+ +F G+G+ + ++ + + + VFA
Sbjct: 128 KTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHN---VAYKHNGYSVFAG 184
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
+G E N +E G +++ L ++P R LT+AEY + + V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPI 306
L+ + ++ Y ++ E+SA +P GY + ++ + ER K GSIT +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIAST--KNGSITSVQA 302
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 366
+ +P DD+T P P + VL+R++ KGIYP +D L S SR++ + E
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQM----IGE 358
Query: 367 DHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
H ++A + + + L+D++A++G + LSE DKK +E A + E+ F++Q ++
Sbjct: 359 KHYEIATGIQQVLQKYKDLQDIIAILGLDELSEEDKKTVERARKIEK-FLSQPFF 412
>pir||C81427 H+-transporting ATP synthase (EC 3.6.1.34) F1 sector beta chain
Cj0107 [imported] - Campylobacter jejuni (strain NCTC
11168) >gi|6967601|emb|CAB72591.1| (AL139074) ATP
synthase F1 sector beta subunit [Campylobacter jejuni]
Length = 465
Score = 152 bits (380), Expect = 8e-36
Identities = 111/415 (26%), Positives = 200/415 (47%), Gaps = 14/415 (3%)
Query: 11 ISKIYGPLMIVEGVKGVAY-GEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD-- 67
IS++ GP++ V+ + E + + ES K+ VL+ +L +V D+
Sbjct: 5 ISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLEVAAHLGDNRVRTIAMDMTDG 64
Query: 68 -VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
V+ G + VPV +LGRIFN G ID G EI + + +H P ++
Sbjct: 65 LVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGEEISFDKKWAIHRDPPAFEDQST 124
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAA 186
+ +TGI +D + +G K+ +F G+G+ + ++ + S VFA
Sbjct: 125 KSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAF---KHSGYSVFAG 181
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
+G E N +E+ +++ L ++P R LT+AEY + + V
Sbjct: 182 VGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 241
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPI 306
L+ + ++ + ++ E+SA +P GY + +++ ER KKGSIT +
Sbjct: 242 LMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERITST--KKGSITSVQA 299
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 366
+ +P DD+T P P + VL+R + KGIYP +D L S SR++ I E
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPNI----IGE 355
Query: 367 DHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
+H ++A+ + + + + L+D++A++G + LSE DK +E A + E+ F++Q ++
Sbjct: 356 EHYKVARGVQSVLQKYKDLQDIIAILGMDELSEEDKLVVERARKIEK-FLSQPFF 409
>sp|P25075|ATPX_BACFI ATP SYNTHASE BETA CHAIN >gi|67850|pir||PWBSBF H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Bacillus firmus
(strain RAB)
Length = 467
Score = 151 bits (378), Expect = 1e-35
Identities = 111/429 (25%), Positives = 202/429 (46%), Gaps = 32/429 (7%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDL 66
EY + + GP++ V+ G + +++ S ++ + +AI + R +
Sbjct: 2 EYRSHISVMGPVVDVKFKSGQYPESINALKSTSRVRQNAVDVTVTLEVAIALGDDSVRTV 61
Query: 67 DVKTTSVRF------TGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120
+ +T + TG + VPV LGR+FN +G+ ID G + +D+RD
Sbjct: 62 AMGSTDGLYVYRGTDTGAPISVPVGEATLGRVFNVLGEAIDLGEPVAADDKRD------- 114
Query: 121 PVARAYPR--------DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAK 172
P+ R P+ + ++TGI +D + + G K+ +F G+G+ L ++
Sbjct: 115 PIHREAPKFEELSTTTEILETGIKVVDLLAPYIIGGKIGLFGGAGVGKTVLIQELINN-- 172
Query: 173 VLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMAL 232
+ +E VFA +G E N ++G I+++ + ++P R+ L
Sbjct: 173 -IAQEHGVISVFAGVGERTREGNDLYHEMTDSGVIKKSAMVFGQMNEPPGARMAVALSGL 231
Query: 233 TVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAG 292
T+AE+ D D Q +++ D ++ +A E+SA +P GY + T++ + ER
Sbjct: 232 TMAEHFR-DRDGQDVLLFVDNISFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERIT 290
Query: 293 RIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLS 352
K GS+T + + +P DD T P P T + L R+L GIYP +D L S S
Sbjct: 291 ST--KVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLASTS 348
Query: 353 RLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFE 412
R + I E+H +A+Q+ + + L+D++A++G + LSE DK + A R +
Sbjct: 349 RALSPEI----VGEEHYSVARQVQQTLQKYKELQDIIAILGMDELSEEDKLVVHRARRIQ 404
Query: 413 REFVAQGYY 421
F++Q ++
Sbjct: 405 -FFLSQNFH 412
>sp|Q50331|ATPB_MYCPN ATP SYNTHASE BETA CHAIN >gi|2127619|pir||S62849 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Mycoplasma
pneumoniae >gi|2146069|pir||S73570 ATP synthase beta
chain - Mycoplasma pneumoniae (SGC3) (ATCC 29342)
>gi|1209766|gb|AAC43659.1| (U43738) ATP synthase beta
chain [Mycoplasma pneumoniae] >gi|1673912|gb|AAB95892.1|
(AE000024) ATP synthase beta chain [Mycoplasma
pneumoniae]
Length = 475
Score = 151 bits (378), Expect = 1e-35
Identities = 103/345 (29%), Positives = 176/345 (50%), Gaps = 16/345 (4%)
Query: 80 LKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAID 139
++VPV ++LGR+FN +GKPIDG E+ + + +H P + ++ + +TGI ID
Sbjct: 82 IEVPVGKNVLGRMFNVLGKPIDGKEELPKKPQLPIHRKPPSFDDQSNTLEIFETGIKVID 141
Query: 140 GMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKK 199
+ RG K+ +F G+G+ L ++ + +E S VFA +G E N
Sbjct: 142 LLTPYARGGKIGLFGGAGVGKTVLVQELIHN---IAKEHSGLSVFAGVGERTREGNDLYY 198
Query: 200 SFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEA 259
+ G I++ L ++P R+ ALT+AEY + VL+ + ++ + +A
Sbjct: 199 EMIQGGVIDKTALVFGQMNEPPGARMRVALTALTMAEYFRDHDNQDVLLFIDNIFRFTQA 258
Query: 260 LREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIP 319
E+SA +P GY + T++ + ER K GSIT + + +P DD+T P P
Sbjct: 259 GSEVSALLGRMPSAVGYQPTLATEMGQLQERIAST--KTGSITSVQAIYVPADDLTDPAP 316
Query: 320 DLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLA---QQLY 376
T + + VL R + GI+P I+ L S SRL+ I +H ++A Q +
Sbjct: 317 ATTFTHLDAKTVLDRNIAALGIFPAINPLESTSRLLDPNI----VGINHYKVALGVQNIL 372
Query: 377 AAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
+AE L+D++A++G + L++ DK +E A R R F++Q ++
Sbjct: 373 QRFAE---LQDIIAILGIDELADEDKIIVERARRI-RNFLSQPFF 413
>emb|CAA75478.1| (Y15179) F1-ATP synthase, beta subunit [Sorghum bicolor]
Length = 454
Score = 151 bits (378), Expect = 1e-35
Identities = 115/379 (30%), Positives = 182/379 (47%), Gaps = 21/379 (5%)
Query: 52 ENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDR 111
EN+ +GT L V+ V TG + VPV LGRI N IG+PID +I
Sbjct: 46 ENMVRTIAMDGTEGL-VRGQRVLNTGSPITVPVGRATLGRIINVIGEPIDERGDITTNHF 104
Query: 112 RDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQ- 170
+H V +A + + TGI +D + RG K+ +F G+G+ L ++
Sbjct: 105 LPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNV 164
Query: 171 AKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE--------RAVLFLNLADDPAI 222
AK G F+V FA +G E N + E+G I+ + L ++P
Sbjct: 165 AKAHG---GFSV-FAGVGERTREGNDLYREMIESGVIKLGDKQSESKCALVYGQMNEPPG 220
Query: 223 ERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYT 282
R LTVAE+ VL+ + ++ + +A E+SA +P GY + T
Sbjct: 221 ARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLAT 280
Query: 283 DLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIY 342
DL + ER KKGSIT + + +P DD+T P P T + VLSR++ +GIY
Sbjct: 281 DLGGLQERITTT--KKGSITSVQAIYVPADDLTDPAPATTYAHLDATTVLSRQISERGIY 338
Query: 343 PPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDK 402
P +D L S SR++ + EDH A+ + + ++L+D++A++G + LSE DK
Sbjct: 339 PAVDPLDSTSRMLSPHV----LGEDHYNTARGVQKVLQKYKNLQDIIAILGMDELSEDDK 394
Query: 403 KYLEFADRFEREFVAQGYY 421
+ A + +R F++Q ++
Sbjct: 395 LTVARARKIQR-FLSQPFH 412
>gi|11467561 ATP synthase CF1 subunit beta [Odontella sinensis]
>gi|1352032|sp|P49647|ATPB_ODOSI ATP SYNTHASE BETA CHAIN
>gi|421741|pir||S33353 H+-transporting ATP synthase (EC
3.6.1.34) beta chain - Odontella sinensis
>gi|7436087|pir||S78366 H+-transporting ATP synthase (EC
3.6.1.34) beta chain - Odontella sinensis chloroplast
>gi|297868|emb|CAA51161.1| (X72497) ATPase [Odontella
sinensis] >gi|1185256|emb|CAA91739.1| (Z67753) ATP
synthase CF1 subunit beta [Odontella sinensis]
Length = 475
Score = 151 bits (377), Expect = 2e-35
Identities = 116/421 (27%), Positives = 199/421 (46%), Gaps = 21/421 (4%)
Query: 11 ISKIYGPLMIVEGVKGVA--YGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDV 68
+++I GP++ +E G ++IETE G +V + + V + D
Sbjct: 11 VNQIIGPVLDIEFPSGTLPPIYSALKIETEDGIGTVVEVQQLLGDNKVRAVSMRSTDGLK 70
Query: 69 KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHG-APLNPVARAYP 127
+ R G + VPV + LGRIFN IG+P+D ++ ++ +H AP P
Sbjct: 71 RGVEARDLGGPISVPVGISTLGRIFNVIGEPVDEQGDVSYDETLPIHREAPAFTELETKP 130
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAM 187
F +TGI +D + RG K+ +F G+G+ L ++ + + VF +
Sbjct: 131 SIF-ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---IAKAHGGVSVFGGV 186
Query: 188 GITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
G E N + +E+G I + L ++P R+ ALT+AEY
Sbjct: 187 GERTREGNDLYEEMKESGVINENNFKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRD 246
Query: 241 DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGS 300
VL+ + ++ + +A E+SA +P GY + T++ + ER +GS
Sbjct: 247 VNKQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTT--QGS 304
Query: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG 360
IT + + +P DD+T P P T + VLSR L KGIYP +D L S S +++ GI
Sbjct: 305 ITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIV 364
Query: 361 KGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
G +H ++A+ + + L+D++A++G + LSE D+ + A + ER F++Q +
Sbjct: 365 SG----EHYEIAETVKETLQRYKELQDIIAILGIDELSEEDRLTVARARKVER-FLSQPF 419
Query: 421 Y 421
+
Sbjct: 420 F 420
>gb|AAB52239.1| (U85783) nucleotide binding protein FliI [Legionella pneumophila]
Length = 449
Score = 151 bits (377), Expect = 2e-35
Identities = 115/366 (31%), Positives = 183/366 (49%), Gaps = 14/366 (3%)
Query: 76 TGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGI 135
TG +V V +LGRI NG G ID GP + + G +NP+ RA + GI
Sbjct: 92 TGRIAQVSVGHQLLGRILNGSGMFIDDGPPGEMVETYPLIGQVINPLKRAPIEVPLDVGI 151
Query: 136 SAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEAN 195
AI+G+ T+ RGQ++ +F+GSG+ + L + R E+ VV +G E
Sbjct: 152 RAINGLLTVGRGQRIGLFAGSGVGKSVLLGMMTRFT------EADVVVVGLIGERGREVK 205
Query: 196 FFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTN 255
F + + RAV+ AD+ + R+ ++A ++AEY D VL+++ +T
Sbjct: 206 EFIECNLGLEGLRRAVVVAAPADESPLMRLHGAKVATSIAEYFR-DQGKHVLLLIDSLTR 264
Query: 256 YCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDIT 315
+ +A REI+ + E P +GYP ++ L + ERAG GSIT + DD+
Sbjct: 265 FAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAGNGTSGGGSITAFYTVLTEGDDLQ 324
Query: 316 HPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQL 375
PI D I +G +VLSR L +G YP ID+ S+SR+M+ + + ++ L ++
Sbjct: 325 DPIADAARAILDGHVVLSRALAEQGQYPAIDLEASISRVMQGVVSEQHMKD--MLLFKKY 382
Query: 376 YAAYAEGRSLRDLVAVV-GEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEETLDLGW 434
+ Y + + L L A G + L DK L A ++++AQG E S +E+L
Sbjct: 383 LSVYEKNKDLILLGAYAKGSDPL--VDKAIL--AVNKLKDYLAQGMDEQVSYDESLSSLT 438
Query: 435 ELLSIL 440
+L+S L
Sbjct: 439 KLISTL 444
>dbj|BAA23688.1| (AB006151) proton-translocating ATPase, beta subunit [Ruminococcus
albus]
Length = 479
Score = 151 bits (377), Expect = 2e-35
Identities = 97/346 (28%), Positives = 171/346 (49%), Gaps = 10/346 (2%)
Query: 76 TGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGI 135
TG + VPV + L R+FN +G P+D P +R ++H P + + + ++TGI
Sbjct: 75 TGRAISVPVGRETLSRMFNLLGDPVDNLPAPETAERWEIHREPPSYEEQTAANEILETGI 134
Query: 136 SAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEAN 195
ID + ++G K+ +F G+G+ L ++ + + VF +G E N
Sbjct: 135 KVIDLIAPYLKGGKIGLFGGAGVGKTVLIQELINN---VANQHGGISVFTGVGERTREGN 191
Query: 196 FFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTN 255
+E+G I++ VL ++P R+ LT+AEY VL+ + ++
Sbjct: 192 DLYWEMKESGVIDKTVLVYGQMNEPPGARMRVGLSGLTMAEYFRDVEGQDVLLFIDNIFR 251
Query: 256 YCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDIT 315
+ +A E+SA +P GY + T++ + ER KGSIT + + +P DD+T
Sbjct: 252 FTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTNKGSITSVQAVYVPADDLT 309
Query: 316 HPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQL 375
P P T + VLSR + GI+P +D L S SR++ I +H Q+A+Q+
Sbjct: 310 DPAPATTFAHLDATTVLSRSIASLGIFPAVDPLESTSRILTPEI----VGNEHYQVARQV 365
Query: 376 YAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
+ L+D++A++G + LS+ DK + A + +R F++Q ++
Sbjct: 366 QSILQRYVELQDIIAIMGMDELSDEDKLTVSRARKIQR-FLSQPFF 410
>sp|P55988|ATPB_HELPY ATP SYNTHASE BETA CHAIN >gi|7436090|pir||D64661 ATP synthase F1,
subunit beta - Helicobacter pylori (strain 26695)
>gi|2314283|gb|AAD08174.1| (AE000619) ATP synthase F1,
subunit beta (atpD) [Helicobacter pylori 26695]
Length = 469
Score = 150 bits (375), Expect = 3e-35
Identities = 110/415 (26%), Positives = 203/415 (48%), Gaps = 14/415 (3%)
Query: 11 ISKIYGPLMIVEGVKGV-AYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLD-- 67
I ++ GP++ VE + A E ++I E +K VL+ +L +V D+
Sbjct: 8 IIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMTEG 67
Query: 68 -VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
V+ ++ G+ ++VPV ++LGRIFN +G+ ID + P +H + ++
Sbjct: 68 LVRNQVIKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAPSFEQQST 127
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAA 186
+ +TGI ID + +G K+ +F G+G+ + ++ + + + VFA
Sbjct: 128 KTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHN---VAYKHNGYSVFAG 184
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
+G E N +E G +++ L ++P R LT+AEY + + V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPI 306
L+ + ++ Y ++ E+SA +P GY + ++ + ER K GSIT +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIAST--KNGSITSVQA 302
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 366
+ +P DD+T P P + VL+R++ KGIYP +D L S SR++ + E
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQM----IGE 358
Query: 367 DHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
H ++A + + + L+D++A++G + LSE DKK +E A + E+ F++Q ++
Sbjct: 359 KHYEVATGIQQVLQKYKDLQDIIAILGLDELSEEDKKTVERARKIEK-FLSQPFF 412
>pir||C72046 type III secretion cytoplasmic ATPase SctN CP0039 [imported] -
Chlamydophila pneumoniae (strains CWL029 and AR39)
>gi|4377010|gb|AAD18846.1| (AE001652) Yops secretion
ATPase [Chlamydophila pneumoniae CWL029]
>gi|6672040|dbj|BAA88657.1| (AB035949) Yop N
(flagellar-type ATPase) [Chlamydophila pneumoniae]
>gi|7188979|gb|AAF37934.1| (AE002167) type III secretion
cytoplasmic ATPase SctN [Chlamydophila pneumoniae AR39]
>gi|8979079|dbj|BAA98914.1| (AP002547) YopN
[Chlamydophila pneumoniae J138]
Length = 442
Score = 149 bits (373), Expect = 5e-35
Identities = 107/348 (30%), Positives = 175/348 (49%), Gaps = 13/348 (3%)
Query: 11 ISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKT 70
I+++ G ++I V V GEV ++ E +V+ ++ A + + +
Sbjct: 27 ITEVVG-MLIKAVVPNVRVGEVCLVKRNGMEPLVTEVVGFTQSFAFLSPLGELSGVS-PS 84
Query: 71 TSVRFTGETLKVPVSMDMLGRIFNGIGKPID---GGPEIIPEDRRDVHGAPLNPVARAYP 127
+ V TG L + +LGR+ NG+G+PID GP + + AP +P+ RA
Sbjct: 85 SEVIPTGLPLHIRAGNGLLGRVLNGLGEPIDVETKGPLQNVDQTFPIFRAPPDPLHRAKL 144
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAM 187
R + TG+ IDGM T+ RGQ++ IF+G+G+ + L IAR A EE+ V A +
Sbjct: 145 RQILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSSLLGMIARNA-----EEADVNVIALI 199
Query: 188 GITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVL 247
G E F + ++R+V+ ++ +D + R+ + +AEY D V+
Sbjct: 200 GERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAIAEYFR-DQGKTVV 258
Query: 248 VILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPIL 307
+++ +T + ALRE+ A E P R GY +++ L + ER+G KG+IT +
Sbjct: 259 LMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLLERSG--ASDKGTITAFYTV 316
Query: 308 TMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLM 355
+ DD+ P+ D I +G IVLS L + YP IDVL S+SRL+
Sbjct: 317 LVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLL 364
>sp|O83417|FLII_TREPA FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436100|pir||A71329 probable
flagellum-specific ATP synthase (fliI) - syphilis
spirochete >gi|3322685|gb|AAC65390.1| (AE001218)
flagellum-specific ATP synthase (fliI) [Treponema
pallidum]
Length = 447
Score = 148 bits (371), Expect = 9e-35
Identities = 114/355 (32%), Positives = 172/355 (48%), Gaps = 16/355 (4%)
Query: 77 GETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGIS 136
G L VPV +LGR+ N GK IDG EI R +V A NP+ R + TG+
Sbjct: 90 GAALSVPVGDALLGRVLNAFGKAIDGKGEIYAPLRSEVLRASSNPMERLPITRQMVTGVR 149
Query: 137 AIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANF 196
+D + + GQ+L IFSGSG+ + L IAR ++ V A +G E
Sbjct: 150 VLDSLLAVGCGQRLGIFSGSGVGKSTLMGMIARNT------DADVSVIALIGERGREVMD 203
Query: 197 FKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNY 256
F ++R+V+ +D+ + R+ A +AEY D QVL++ +T +
Sbjct: 204 FVAHDLGPEGLKRSVIVSATSDESPLARVRGAYTATAIAEYFR-DQGKQVLLLFDSLTRF 262
Query: 257 CEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITH 316
+A REI A E+P RGY ++ L + ERAG GS+T + + DD+
Sbjct: 263 AKAQREIGLASGELPATRGYTPGVFETLPKLLERAGSF--SMGSVTAFYTVLVDGDDLDE 320
Query: 317 PIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLY 376
PI D I +G IVLSR L ++ YP IDVL S+SRL + G ++ ++ ++
Sbjct: 321 PISDAVRGIVDGHIVLSRALAQRNHYPAIDVLQSVSRLAHRVL--GADMKEAVRIVRRAL 378
Query: 377 AAYAEGRSLRDLVAVVGEEALSETD-KKYLEFADRFEREFVAQGYYEDRSIEETL 430
A YAE + DLV V + S+ + + + ER F+ QG E ++T+
Sbjct: 379 AVYAE---VEDLVRVGAYQQGSDAELDRAIAMRAELER-FLTQGAQERVRFQDTV 429
>pir||A71486 probable yop N (flagellar-type ATPase) - Chlamydia trachomatis
(serotype D, strain UW3/Cx) >gi|3329120|gb|AAC68264.1|
(AE001337) Yops secretion ATPase [Chlamydia trachomatis]
Length = 442
Score = 148 bits (370), Expect = 1e-34
Identities = 105/341 (30%), Positives = 169/341 (48%), Gaps = 12/341 (3%)
Query: 18 LMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTG 77
++I V V GEV ++ E +V+ +N + + ++ V TG
Sbjct: 33 MLIKAVVPDVRVGEVCLVKRHGMEPLVTEVVGFTQNFVFLSPLGELTGVS-PSSEVMATG 91
Query: 78 ETLKVPVSMDMLGRIFNGIGKPIDG---GPEIIPEDRRDVHGAPLNPVARAYPRDFIQTG 134
L + +LGR+ NG+G PID GP + + AP +P+ RA R + TG
Sbjct: 92 LPLHIRAGEGLLGRVLNGLGNPIDTETKGPLENVDAIYPIFKAPPDPLHRAKLRTILSTG 151
Query: 135 ISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEA 194
+ IDGM T+ +GQ++ IF+G+G+ + L IAR A EE+ V A +G E
Sbjct: 152 VRCIDGMLTVAKGQRIGIFAGAGVGKSSLLGMIARNA-----EEADINVIALIGERGREV 206
Query: 195 NFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMT 254
F ++ ++R+V+ ++ +D + R+ + +AEY D V++++ +T
Sbjct: 207 REFIENDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAIAEYFR-DQGKTVVLMMDSVT 265
Query: 255 NYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDI 314
+ ALRE+ A E P R GY +++ L + ERAG KG+IT + + DD+
Sbjct: 266 RFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERAG--ASDKGTITAFYTVLVAGDDM 323
Query: 315 THPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLM 355
P+ D I +G IVLS L + YP IDVL S+SRL+
Sbjct: 324 NEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLL 364
>pir||D81749 type III secretion cytoplasmic ATPase SctN TC0040 [imported] -
Chlamydia muridarum (strain Nigg)
>gi|7190080|gb|AAF38931.1| (AE002271) type III secretion
cytoplasmic ATPase SctN [Chlamydia muridarum]
Length = 442
Score = 148 bits (370), Expect = 1e-34
Identities = 110/373 (29%), Positives = 182/373 (48%), Gaps = 27/373 (7%)
Query: 1 MMEMSKEYSTI---------SKIYGPLMIVEG------VKGVAYGEVVEIETESGEKRKG 45
M E++ E+ T+ + + G ++ V G V V GEV ++ E
Sbjct: 1 MKELTTEFDTLMTELPEVQLTAVVGRIIEVVGMLIKAVVPDVRVGEVCLVKRHGMEPLVT 60
Query: 46 QVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPID---G 102
+V+ +N + + ++ V TG L + +LGR+ NG+G+PID
Sbjct: 61 EVVGFTQNFVFLSPLGELSGVS-PSSEVIATGLPLHIRAGAGLLGRVLNGLGEPIDIETK 119
Query: 103 GPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQ 162
GP + + AP +P+ R R + TG+ IDGM T+ +GQ++ IF+G+G+ +
Sbjct: 120 GPLENVDSIYPIFKAPPDPLHREKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKSS 179
Query: 163 LAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAI 222
L IAR A EE+ V A +G E F ++ ++R+V+ ++ +D +
Sbjct: 180 LLGMIARNA-----EEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQ 234
Query: 223 ERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYT 282
R+ + +AEY D V++++ +T + ALRE+ A E P R GY +++
Sbjct: 235 LRLNAAYVGTAIAEYFR-DQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFS 293
Query: 283 DLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIY 342
L + ERAG +KG+IT + + DD+ P+ D I +G IVLS L + Y
Sbjct: 294 TLPKLLERAG--ASEKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHY 351
Query: 343 PPIDVLPSLSRLM 355
P IDVL S+SRL+
Sbjct: 352 PAIDVLASISRLL 364
>gb|AAA22253.1| (M31107) ATP synthase beta subunit (atpD) (EC 3.6.1.3) [Bacillus
firmus]
Length = 467
Score = 148 bits (369), Expect = 2e-34
Identities = 110/429 (25%), Positives = 201/429 (46%), Gaps = 32/429 (7%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDL 66
EY + + GP++ V+ G + +++ S ++ + +AI + R +
Sbjct: 2 EYRSHISVMGPVVDVKFKSGQYPESINALKSTSRVRQNAVDVTVTLEVAIALGDDSVRTV 61
Query: 67 DVKTTSVRF------TGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120
+ +T + TG + VPV LGR+FN +G+ ID G + +D+RD
Sbjct: 62 AMGSTDGLYVYRGTDTGAPISVPVGEATLGRVFNVLGEAIDLGEPVAADDKRD------- 114
Query: 121 PVARAYPR--------DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAK 172
P+ R P+ + ++TGI +D + + G K+ +F G+G+ L ++
Sbjct: 115 PIHREAPKFEELSTTTEILETGIKVVDLLAPYIIGGKIGLFGGAGVGKTVLIQELINN-- 172
Query: 173 VLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMAL 232
+ +E VFA +G E N ++G I+++ + ++P R+ L
Sbjct: 173 -IAQEHGVISVFAGVGERTREGNDLYHEMTDSGVIKKSAMVFGQMNEPPGARMAVALSGL 231
Query: 233 TVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAG 292
T+AE+ D D Q +++ ++ +A E+SA +P GY + T++ + ER
Sbjct: 232 TMAEHFR-DRDGQDVLLFVVNISFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERIT 290
Query: 293 RIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLS 352
K GS+T + + +P DD T P P T + L R+L GIYP +D L S S
Sbjct: 291 ST--KVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLASTS 348
Query: 353 RLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFE 412
R + I E+H +A+Q+ + + L+D++A++G + LSE DK + A R +
Sbjct: 349 RALSPEI----VGEEHYSVARQVQQTLQKYKELQDIIAILGMDELSEEDKLVVHRARRIQ 404
Query: 413 REFVAQGYY 421
F++Q ++
Sbjct: 405 -FFLSQNFH 412
>sp|P52607|FLII_BORBU FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436104|pir||H70135
flagellum-specific ATP synthase (fliI) homolog - Lyme
disease spirochete >gi|1165272|gb|AAA85611.1| (U43739)
FliI [Borrelia burgdorferi] >gi|2688178|gb|AAC66660.1|
(AE001137) flagellum-specific ATP synthase (fliI)
[Borrelia burgdorferi]
Length = 436
Score = 147 bits (368), Expect = 2e-34
Identities = 98/343 (28%), Positives = 175/343 (50%), Gaps = 10/343 (2%)
Query: 11 ISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKT 70
+ KI G L+ G + A G++ I+ +G+K +VL + +EG ++V
Sbjct: 24 VQKIKGLLVESLGPQ-CAIGDLCLIDQRNGKKVCAEVLGFNGPYVSLMAYEGFSGIEVGN 82
Query: 71 TSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDF 130
V + L++ +S ++LGR+ + +G+PID + +++ +NP+ R+ D
Sbjct: 83 -KVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINPINRSIFEDQ 141
Query: 131 IQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGIT 190
I TG+ +DG + +GQ++ IFSGSG+ + L IA+ + + V A +G
Sbjct: 142 ILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLLGMIAKNS------NADVNVIAFIGER 195
Query: 191 YEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVIL 250
E N F + ++++VL ++ +D+ I R +A +AEY + V ++
Sbjct: 196 GRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFR-EQGKDVALLF 254
Query: 251 TDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMP 310
+T + A RE+S + E P +GYP ++ ++ + ER+G G GS+T + +
Sbjct: 255 DSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSG-FNGNGGSVTGFYTVLVE 313
Query: 311 DDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSR 353
DD T P+ D + +G I+L R+L +GIYP I+VL S SR
Sbjct: 314 GDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSR 356
>sp|P00824|ATPB_ECOLI ATP SYNTHASE BETA CHAIN >gi|67830|pir||PWECB H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Escherichia coli
>gi|41038|emb|CAA23527.1| (V00267) reading frame beta
[Escherichia coli] >gi|42277|emb|CAA23594.1| (V00311)
reading frame papB [Escherichia coli]
>gi|146325|gb|AAA83875.1| (M25464) H+ ATPase F1 beta
subunit [Escherichia coli] >gi|148139|gb|AAA24737.1|
(J01594) ATP synthase beta subunit (atp-8) [Escherichia
coli] >gi|290581|gb|AAA62084.1| (L10328) ATP synthase F1
beta subunit [Escherichia coli]
>gi|899257|emb|CAA25782.1| (X01631) uncD protein
[Escherichia coli] >gi|1790170|gb|AAC76755.1| (AE000450)
membrane-bound ATP synthase, F1 sector, beta-subunit
[Escherichia coli K12]
Length = 460
Score = 147 bits (367), Expect = 3e-34
Identities = 116/414 (28%), Positives = 200/414 (48%), Gaps = 16/414 (3%)
Query: 11 ISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLA---IVQVFEGTRDLD 67
I ++ G ++ VE + +E ++G +R VL+ ++ L + + G+ D
Sbjct: 6 IVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERL--VLEVQQQLGGGIVRTIAMGSSDGL 63
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
+ V+ ++VPV LGRI N +G+P+D EI E+R +H A + +
Sbjct: 64 RRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNS 123
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAM 187
++ ++TGI ID M +G K+ +F G+G+ ++ R + E S VFA +
Sbjct: 124 QELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI---EHSGYSVFAGV 180
Query: 188 GITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVL 247
G E N F ++ I++ L ++P R+ LT+AE D VL
Sbjct: 181 GERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFR-DEGRDVL 239
Query: 248 VILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPIL 307
+ + ++ Y A E+SA +P GY + ++ + ER K GSIT + +
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297
Query: 308 TMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRED 367
+P DD+T P P T + +VLSR++ GIYP +D L S SR + D + G+ D
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQL-DPLVVGQEHYD 356
Query: 368 HPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
+ Q + Y E L+D++A++G + LSE DK + A + +R F++Q ++
Sbjct: 357 TARGVQSILQRYQE---LKDIIAILGMDELSEEDKLVVARARKIQR-FLSQPFF 406
>gb|AAF19362.1|AF188265_8 (AF188265) ATP synthase subunit beta [Salmonella typhimurium]
Length = 460
Score = 146 bits (366), Expect = 4e-34
Identities = 116/414 (28%), Positives = 200/414 (48%), Gaps = 16/414 (3%)
Query: 11 ISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLA---IVQVFEGTRDLD 67
I ++ G ++ VE + +E ++G +R VL+ ++ L + + G+ D
Sbjct: 6 IVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERL--VLEVQQQLGGGIVRTIAMGSSDGL 63
Query: 68 VKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYP 127
+ V+ ++VPV LGRI N +G+P+D EI E+R +H A + +
Sbjct: 64 RRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNS 123
Query: 128 RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAM 187
++ ++TGI ID M +G K+ +F G+G+ ++ R + E S VFA +
Sbjct: 124 QELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI---EHSGYSVFAGV 180
Query: 188 GITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVL 247
G E N F ++ I++ L ++P R+ LT+AE D VL
Sbjct: 181 GERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFR-DEGRDVL 239
Query: 248 VILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPIL 307
+ + ++ Y A E+SA +P GY + ++ + ER K GSIT + +
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297
Query: 308 TMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRED 367
+P DD+T P P T + +VLSR++ GIYP +D L S SR + D + G+ D
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQL-DPLVVGQEHYD 356
Query: 368 HPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
+ Q + Y E L+D++A++G + LSE DK + A + +R F++Q ++
Sbjct: 357 TARGVQSILQRYQE---LKDVIAILGMDELSEEDKLVVARARKIQR-FLSQPFF 406
>gi|11466372 CF1 beta subunit of ATP synthase [Mesostigma viride]
>gi|7259515|gb|AAF43816.1|AF166114_28 (AF166114) CF1
beta subunit of ATP synthase [Mesostigma viride]
Length = 481
Score = 146 bits (364), Expect = 6e-34
Identities = 113/430 (26%), Positives = 200/430 (46%), Gaps = 23/430 (5%)
Query: 5 SKEYSTISKIYGPLMIVEGVKG----VAYGEVVEIETESGEKRKG--QVLDARENLAIVQ 58
+K +I++I GP++ + G + +V+ + E+GE +V + +
Sbjct: 6 TKRIGSITQIIGPVLDAKFPPGQMPNIYNALIVKAKNEAGEDLSVTCEVQQLLGDNQVRA 65
Query: 59 VFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAP 118
V D ++ + TG L VPV LGRIFN +G+P+DG +++ + + +H
Sbjct: 66 VAMSATDGLMRGLEILDTGAPLSVPVGEITLGRIFNVLGEPVDGLGDVVAKTKSPIHRNS 125
Query: 119 LNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEE 178
+ +TGI +D + RG K+ +F G+G+ L ++ + +
Sbjct: 126 PTFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---IAKAH 182
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIITPRMA 231
VF +G E N +E+ I + L ++P R+ A
Sbjct: 183 GGVSVFGGVGERTREGNDLYMEMKESKVINEENLSSSKVALVYGQMNEPPGARMRVGLTA 242
Query: 232 LTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERA 291
LT+AEY + VL+ + ++ + +A E+SA +P GY + ++ T+ ER
Sbjct: 243 LTMAEYFRDVNNQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSREMGTLQERI 302
Query: 292 GRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSL 351
K+GSIT + + +P DD+T P P T + VLSR L KGIYP +D L S
Sbjct: 303 TST--KQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDST 360
Query: 352 SRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRF 411
S +++ I E+H AQ++ + L+D++A++G + LSE D+ + A +
Sbjct: 361 STMLQPWI----VGEEHYGTAQRVKQTLQRYKELQDIIAILGLDELSEEDRLVVARARKI 416
Query: 412 EREFVAQGYY 421
ER F++Q ++
Sbjct: 417 ER-FLSQPFF 425
>gi|7524779 ATP synthase CF1 alpha chain [Chlorella vulgaris]
>gi|3023328|sp|P56294|ATPA_CHLVU ATP SYNTHASE ALPHA
CHAIN >gi|7436066|pir||T07209 H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - Chlorella vulgaris
chloroplast >gi|2224372|dbj|BAA57856.1| (AB001684) ATP
synthase CF1 alpha chain [Chlorella vulgaris]
Length = 506
Score = 145 bits (363), Expect = 8e-34
Identities = 122/414 (29%), Positives = 192/414 (45%), Gaps = 31/414 (7%)
Query: 10 TISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVK 69
T+ ++ + + G+ V GE+VE E G L+A+ N+ V + EGTR +
Sbjct: 31 TVFQVGDGIARIYGLDKVMAGELVEFE--DGTVGIALNLEAK-NVGAVLMGEGTRVQE-- 85
Query: 70 TTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRD 129
+SVR TG+ ++PV LGR+ N + +PIDG EI ++ R + ++R +
Sbjct: 86 GSSVRATGKIAQIPVGDGYLGRVVNSLARPIDGKGEIATKENRLIESPAPGIISRRSVHE 145
Query: 130 FIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGI 189
+QTGI AID M + RGQ+ I +A K + V+ A+G
Sbjct: 146 PLQTGIVAIDAMIPIGRGQRELIIGDRQTGKTAIAVDTILNQK----GKDVVCVYVAIGQ 201
Query: 190 TYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVI 249
+ +E GA++ ++ AD PA + ++P +AEY + LVI
Sbjct: 202 KASSIAQVVNTLQERGAMDYTIIVAATADSPATLQYLSPYTGAALAEYFMYT-GRHTLVI 260
Query: 250 LTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMPIL 307
D+T +A RE+S PGR YPG ++ + + ERA ++ K GS+T +P++
Sbjct: 261 YDDLTKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDKLGSGSMTALPVV 320
Query: 308 TMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL--------MKDGI 359
+ D++ IP IT+GQI LS ++ GI P I+V S+SR+ MK
Sbjct: 321 ETQEGDVSAYIPTNVISITDGQIFLSADIFNAGIRPAINVGISVSRVGSAAQPKAMKQVA 380
Query: 360 GKGRTR-------EDHPQLAQQLYAA----YAEGRSLRDLVAVVGEEALSETDK 402
GK + E Q A L A A G+ LR+L+ LS D+
Sbjct: 381 GKLKLELAQFAELEAFSQFASDLDQATQNQLARGQRLRELLKQSQSSPLSLEDQ 434
>sp|P00828|ATPB_HORVU ATP SYNTHASE BETA CHAIN >gi|67835|pir||PWBHB H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - barley chloroplast
>gi|11583|emb|CAA25114.1| (X00408) atpB (beta subunit of
ATPase) [Hordeum vulgare]
Length = 498
Score = 145 bits (362), Expect = 1e-33
Identities = 123/441 (27%), Positives = 202/441 (44%), Gaps = 43/441 (9%)
Query: 5 SKEYST--ISKIYGPLMIVEGVKG---VAYGEVVEIETESGEKRKGQVLDARE---NLAI 56
S+E ST I +I GP++ V G Y +V ++ +K+ + ++ N +
Sbjct: 15 SEEKSTGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRV 74
Query: 57 VQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDG-GPEIIPEDRRDVH 115
V D ++ V TG L VPV LGRIFN +G+P+D GP V
Sbjct: 75 RAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGP---------VD 125
Query: 116 GAPLNPVARAYPR--------DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQI 167
+ P+ R+ P +TGI +D + RG K+ +F G+G+ L ++
Sbjct: 126 SSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMEL 185
Query: 168 ARQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDP 220
+ + VF +G E N +E+G I + L ++P
Sbjct: 186 INN---IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEP 242
Query: 221 AIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYM 280
R+ ALT+AEY VL+ + D+ + +A E+SA +P GY +
Sbjct: 243 PGARMRVGLTALTMAEYFRDVNKQDVLLFIDDIFRFVQAGSEVSALLGRMPSAVGYQPTL 302
Query: 281 YTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKG 340
T++ ++ ER KKGSIT + + +P DD+T P P T + VLSR L KG
Sbjct: 303 STEMGSLQERIAST--KKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKG 360
Query: 341 IYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSET 400
IYP +D L S S +++ I +H + AQ++ + L+D++A++G + LSE
Sbjct: 361 IYPAVDPLDSTSTMLQPRI----VGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 416
Query: 401 DKKYLEFADRFEREFVAQGYY 421
D+ + A + ER F++Q ++
Sbjct: 417 DRLTVARARKIER-FLSQPFF 436
>emb|CAB90022.1| (AJ235406) ATP synthase beta subunit [Barbacenia elegans]
Length = 485
Score = 145 bits (361), Expect = 1e-33
Identities = 120/435 (27%), Positives = 199/435 (45%), Gaps = 35/435 (8%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAR-------ENLAIVQ 58
K Y I++I GP++ V G + G GQ ++ N +
Sbjct: 8 KNYGRIAQIIGPVLDVAFPPG-KMPNIYNALVVKGRDTAGQPINVTCEVQQLLGNNRVRA 66
Query: 59 VFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAP 118
V D + V TG L VPV LGRIFN +G+P+D + P D R +P
Sbjct: 67 VAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN---LGPVDTRTT--SP 121
Query: 119 LNPVARAYPR-----DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKV 173
++ A A+ + +TGI +D + RG K+ +F G+G+ L ++
Sbjct: 122 IHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN--- 178
Query: 174 LGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERII 226
+ + VF +G E N +E+G I + L ++P R+
Sbjct: 179 IAKAHGGVSVFGGVGERTREGNDLNMEMKESGVINEKNIAESKVALVYGQMNEPPGARMR 238
Query: 227 TPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLAT 286
ALT+AEY + VL+ + ++ + +A E+SA +P GY + T++ +
Sbjct: 239 VGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGS 298
Query: 287 IYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPID 346
+ ER K+GSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 299 LQERITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVD 356
Query: 347 VLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLE 406
L S S +++ I E+H + AQ++ + L+D++A++G + LSE D+ +
Sbjct: 357 PLDSTSTMLQPRI----VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVA 412
Query: 407 FADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 413 RARKIER-FLSQPFF 426
>emb|CAB65431.1| (AJ236214) ATP synthase beta subunit [Sollya heterophylla]
Length = 498
Score = 144 bits (360), Expect = 2e-33
Identities = 118/435 (27%), Positives = 196/435 (44%), Gaps = 35/435 (8%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDA-----------RENL 54
K +I++I GP++ V G + G+ GQ ++ R
Sbjct: 18 KNLGSIAQIIGPVLDVAFPPG-KMPNIYNALVVKGQDTVGQQINVTCEVQQLLGNNRVRA 76
Query: 55 AIVQVFEG-TRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRD 113
+ EG TR ++V T G L VPV LGRIFN +G+P+D I
Sbjct: 77 VAMSATEGLTRGMEVVDT-----GAPLSVPVGGTTLGRIFNVLGEPVDNLGPIDTRTTSP 131
Query: 114 VHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKV 173
+H + + +TGI +D + RG K+ +F G+G+ L ++
Sbjct: 132 IHRSAPAFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN--- 188
Query: 174 LGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERII 226
+ + VF +G E N +E+G I + L ++P R+
Sbjct: 189 IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIEESKVALVYGQMNEPPGARMR 248
Query: 227 TPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLAT 286
ALT+AEY + VL+ + ++ + +A E+SA +P GY + T++ T
Sbjct: 249 VGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGT 308
Query: 287 IYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPID 346
+ ER K+GSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 309 LQERITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVD 366
Query: 347 VLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLE 406
L S S +++ I E+H + AQ++ + L+D++A++G + LSE D+ +
Sbjct: 367 PLDSTSTMLQPRI----VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVA 422
Query: 407 FADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 423 RARKIER-FLSQPFF 436
>emb|CAB89995.1| (AJ235610) ATP synthase beta subunit [Stackhousia minima]
Length = 486
Score = 144 bits (360), Expect = 2e-33
Identities = 121/434 (27%), Positives = 201/434 (45%), Gaps = 33/434 (7%)
Query: 6 KEYSTISKIYGPLMIVEGVKG----VAYGEVVEIETESGEKRK--GQVLDARENLAIVQV 59
K ++I GP++ V G + +V+ SG+ G+V N + V
Sbjct: 9 KNPXRFAQIIGPVLDVAFYPGKMPNIYNALIVKGRDTSGQTINVIGEVQQLLGNNQVRAV 68
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
D ++ V TG L VPV LGRIFN +G+P+D + P D R +P+
Sbjct: 69 AMSATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDN---LGPVDTRTT--SPI 123
Query: 120 NPVARAYPR-----DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL 174
+ A A+ +TGI +D + RG K+ +F G+G+ L ++ +
Sbjct: 124 HKSAPAFIELETKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---I 180
Query: 175 GEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIIT 227
+ VF +G E N +E+G I + L ++P R+
Sbjct: 181 AKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRV 240
Query: 228 PRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATI 287
ALT+AEY + VL+ + ++ + +A E+SA +P GY + T++ ++
Sbjct: 241 GLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSL 300
Query: 288 YERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDV 347
ER KKGSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 301 QERITST--KKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 358
Query: 348 LPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEF 407
L S S +++ I E+H + AQ++ + L+D++A++G + LSE D+ +
Sbjct: 359 LDSTSTMLQPRI----VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVAR 414
Query: 408 ADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 415 ARKIER-FLSQPFF 427
>gb|AAF98993.1| (AF274683) ATP synthase beta subunit [Paeonia californica]
Length = 491
Score = 144 bits (360), Expect = 2e-33
Identities = 121/435 (27%), Positives = 200/435 (45%), Gaps = 35/435 (8%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAR-------ENLAIVQ 58
K IS+I GP++ V G + G+ GQ ++ N +
Sbjct: 14 KNQGRISQIIGPVLDVAFPPG-KMPNIXNALVVKGQDNIGQPINVTCEVQQLLGNNRVRT 72
Query: 59 VFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAP 118
V D ++ V TG L VPV LGRIFN +G+P+D + P D R +P
Sbjct: 73 VAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN---LGPVDTRTT--SP 127
Query: 119 LNPVARAYPR-----DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKV 173
++ A A+ + +TGI +D + RG K+ +F G+G+ L ++
Sbjct: 128 IHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN--- 184
Query: 174 LGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERII 226
+ + VF +G E N +E+G I + L ++P R+
Sbjct: 185 IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMR 244
Query: 227 TPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLAT 286
ALT+AEY + VL+ + ++ + +A E+SA +P GY + T++ T
Sbjct: 245 VGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGT 304
Query: 287 IYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPID 346
+ ER K+GSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 305 LQERITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVD 362
Query: 347 VLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLE 406
L S S +++ I E+H + AQ++ + L+D++A++G + LSE D+ +
Sbjct: 363 PLDSTSTMLQPRI----VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVA 418
Query: 407 FADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 419 RARKIER-FLSQPFF 432
>emb|CAB44011.1| (AJ233094) H(+)-transporting ATP synthase [Dais cotinifolia]
Length = 484
Score = 144 bits (359), Expect = 2e-33
Identities = 120/434 (27%), Positives = 203/434 (46%), Gaps = 33/434 (7%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVA---YGEVVEIETESGEKRKGQVLDARE---NLAIVQV 59
K IS+I GP++ V G Y +V ++ ++ + ++ N + V
Sbjct: 8 KNLGRISQIIGPVLDVAFPPGKMPNIYNALVVKGRDTAGQQINVTCEVQQLLGNNRVRAV 67
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
D ++ V TG L VPV LGRIFN +G+PID + P D R +P+
Sbjct: 68 AMSATDGLMRGMEVIDTGTPLSVPVGGSTLGRIFNVLGEPIDN---LGPVDTRTT--SPI 122
Query: 120 NPVARAYPR-----DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL 174
+ A A+ + +TGI +D + RG K+ +F G+G+ L ++ +
Sbjct: 123 HKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---I 179
Query: 175 GEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIIT 227
+ VF +G E N +E+G I + L ++P R+
Sbjct: 180 AKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKDLAESKVALVYGQMNEPPGARMRV 239
Query: 228 PRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATI 287
ALT+AEY + VL+ + ++ + +A E+SA +P GY + T++ ++
Sbjct: 240 GLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSL 299
Query: 288 YERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDV 347
ER K+GSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 300 QERITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 357
Query: 348 LPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEF 407
L S S +++ I E+H + AQ++ + L+D++A++G + LSE D+ +
Sbjct: 358 LDSTSTMLQPRI----VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVAR 413
Query: 408 ADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 414 ARKIER-FLSQPFF 426
>gb|AAF01643.1| (AF093389) ATP synthase beta subunit [Paeonia suffruticosa]
Length = 489
Score = 144 bits (359), Expect = 2e-33
Identities = 121/435 (27%), Positives = 200/435 (45%), Gaps = 35/435 (8%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAR-------ENLAIVQ 58
K IS+I GP++ V G + G+ GQ ++ N +
Sbjct: 9 KNQGRISQIIGPVLDVAFPPG-KMPNIYNALVVKGQDSIGQPINVTCEVQQLLGNNRVRA 67
Query: 59 VFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAP 118
V D ++ V TG L VPV LGRIFN +G+P+D + P D R +P
Sbjct: 68 VAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN---LGPVDTRTT--SP 122
Query: 119 LNPVARAYPR-----DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKV 173
++ A A+ + +TGI +D + RG K+ +F G+G+ L ++
Sbjct: 123 IHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN--- 179
Query: 174 LGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERII 226
+ + VF +G E N +E+G I + L ++P R+
Sbjct: 180 IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMR 239
Query: 227 TPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLAT 286
ALT+AEY + VL+ + ++ + +A E+SA +P GY + T++ T
Sbjct: 240 VGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGT 299
Query: 287 IYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPID 346
+ ER K+GSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 300 LQERITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVD 357
Query: 347 VLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLE 406
L S S +++ I E+H + AQ++ + L+D++A++G + LSE D+ +
Sbjct: 358 PLDSTSTMLQPRI----VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVA 413
Query: 407 FADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 414 RARKIER-FLSQPFF 427
>gb|AAD50892.1| (AF168950) ATP synthase beta subunit [Tradescantia ohiensis]
Length = 496
Score = 143 bits (358), Expect = 3e-33
Identities = 117/434 (26%), Positives = 206/434 (46%), Gaps = 33/434 (7%)
Query: 6 KEYSTISKIYGPLMIV---EGVKGVAYGEVVEIETESGEKRKGQVLDARE---NLAIVQV 59
K I++I GP++ V G Y +V ++ +++ + ++ N + +
Sbjct: 18 KNLGRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTADQQINVTCEVQQLLGNNRVRAI 77
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
D ++ V TG L VPV LGRIFN +G+P+D ++ P D R +P+
Sbjct: 78 AMSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVD---DLGPVDTRIT--SPI 132
Query: 120 NPVARAYPR-----DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL 174
+ A A+ + +TGI +D + RG K+ +F G+G+ L ++ +
Sbjct: 133 HRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---I 189
Query: 175 GEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIIT 227
+ VF +G E N +E+G I + L ++P R+
Sbjct: 190 AKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRV 249
Query: 228 PRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATI 287
ALT+AEY + VL+ + ++ + +A E+SA +P GY + T++ ++
Sbjct: 250 GLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSL 309
Query: 288 YERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDV 347
ER K+GSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 310 QERITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 367
Query: 348 LPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEF 407
L S S +++ I E+H ++AQ++ + L+D++A++G + LSE D+ +
Sbjct: 368 LDSTSTMLQPRI----VGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEEDRLTVAR 423
Query: 408 ADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 424 ARKIER-FLSQPFF 436
>pir||JC5741 membrane-bound proton-translocating ATPase (EC 3.6.1.-) beta chain
- Streptococcus mutans
Length = 469
Score = 143 bits (358), Expect = 3e-33
Identities = 116/453 (25%), Positives = 208/453 (45%), Gaps = 20/453 (4%)
Query: 11 ISKIYGPLMIVEGVKGVAYGEVVE--IETESGEKRKGQVLDAR----ENLAIVQVFEGTR 64
I+++ GP++ V E+ + + G+K + VL+ + L E T
Sbjct: 6 IAQVVGPVVDVAFATDDKLPEINNALVVYKDGDKSQRIVLEVALELGDGLVRTIAMESTD 65
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPID-GGPEIIPEDRRDVHGAPLNPVA 123
L + V TG + VPV + LGR+FN +G ID P +R+ +H +
Sbjct: 66 GL-TRGLEVFDTGRAISVPVGKETLGRVFNVLGDTIDLDKPFAEDAERQPIHKKAPSFDD 124
Query: 124 RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVV 183
+ + ++TGI ID + ++G K+ +F G+G+ L ++ + +E V
Sbjct: 125 LSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHN---IAQEHGGISV 181
Query: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243
F +G E N +E+G IE+ + ++P R+ LT+AEY
Sbjct: 182 FTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEG 241
Query: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQ 303
VL+ + ++ + +A E+SA +P GY + T++ + ER KKGS+T
Sbjct: 242 QDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTS 299
Query: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+ + +P DD T P P + L R L + GIYP +D L S SR + I
Sbjct: 300 IQAIYVPADDYTDPAPATAFAHLDSTTNLERRLTQMGIYPAVDPLASSSRALSPEI---- 355
Query: 364 TREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYED 423
++H +A ++ R L+D++A++G + LS+ +K + A RF F ++
Sbjct: 356 VGQEHYDVATEVQHVLQRYRELQDIIAILGMDELSDEEKTLVGRARRFSSSFHKISMLQN 415
Query: 424 RSIEETLDLGWELLSILPESELKRVKKEMIMKY 456
+++++ L + LL + +LK+ KE +M +
Sbjct: 416 -NLQDSRVLMFLLLKL--SVDLKKFSKENMMNF 445
>emb|CAB89961.2| (AJ235552) ATP synthase beta subunit [Parnassia palustris]
Length = 490
Score = 143 bits (358), Expect = 3e-33
Identities = 120/434 (27%), Positives = 203/434 (46%), Gaps = 33/434 (7%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVA---YGEVVEIETESGEKRKGQVLDARE---NLAIVQV 59
K I++I GP++ V G Y +V ++ ++ V + ++ N + V
Sbjct: 18 KNLGRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGQQINVVCEVQQLLGNNQVRAV 77
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
D + V TG L VPV LGRIFN +G+P+D + P D R +P+
Sbjct: 78 AMSATDGLTRGMEVIDTGVPLNVPVGGATLGRIFNVLGEPVDN---LGPVDTRTT--SPI 132
Query: 120 NPVARAYPR-----DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL 174
+ A A+ + +TGI +D + RG K+ +F G+G+ L ++ +
Sbjct: 133 HRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---I 189
Query: 175 GEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIIT 227
+ VF +G E N +E+G I + L ++P R+
Sbjct: 190 AKAHGGVSVFXGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRV 249
Query: 228 PRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATI 287
ALT+AEY + VL+ + ++ + +A E+SA +P GY + T++ ++
Sbjct: 250 GLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSL 309
Query: 288 YERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDV 347
ER KKGSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 310 QERITST--KKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 367
Query: 348 LPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEF 407
L S S +++ I E+H + AQ++ + L+D++A++G + LSE D+ +
Sbjct: 368 LDSTSTMLQPRI----VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVAR 423
Query: 408 ADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 424 ARKIER-FLSQPFF 436
>emb|CAB89730.1| (AJ235646) ATP synthase beta subunit [Xanthophyllum sp. 'Coode 7760
K']
Length = 486
Score = 143 bits (357), Expect = 4e-33
Identities = 119/434 (27%), Positives = 204/434 (46%), Gaps = 33/434 (7%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVA---YGEVVEIETESGEKRKGQVLDARE---NLAIVQV 59
K I++I GP++ V G Y +V ++ +++ + ++ N + V
Sbjct: 10 KNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVEGRDTADQQINVTCEVQQLLGNNRVRAV 69
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
D ++ V TG L VPV LGRIFN +G+PID + P D R +P+
Sbjct: 70 AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDN---LGPVDTRTT--SPI 124
Query: 120 NPVARAYPR-----DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL 174
+ A A+ + +TGI +D + RG K+ +F G+G+ L ++ +
Sbjct: 125 HRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---I 181
Query: 175 GEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIIT 227
+ VF +G E N +E+G I + L ++P R+
Sbjct: 182 AKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRV 241
Query: 228 PRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATI 287
ALT+AEY + VL+ + ++ + +A E+SA +P GY + T++ ++
Sbjct: 242 GLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSL 301
Query: 288 YERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDV 347
ER K+GSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 302 QERITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 359
Query: 348 LPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEF 407
L S S +++ I E+H + AQ++ + L+D++A++G + LSE D+ +
Sbjct: 360 LDSTSTMLQPRI----VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVAR 415
Query: 408 ADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 416 ARKIER-FLSQPFF 428
>emb|CAA67541.1| (X99079) subunit beta of ATPase [Ochrosphaera neapolitana]
Length = 475
Score = 143 bits (356), Expect = 5e-33
Identities = 119/430 (27%), Positives = 199/430 (45%), Gaps = 20/430 (4%)
Query: 1 MMEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKG-QVLDARENLAIVQV 59
M++++ + IS+I GP++ VE G I ++G+K+ +V N + V
Sbjct: 1 MVDVASKTGIISQIIGPVVDVEFSSGDLPKVYNAIVIDAGDKKVTCEVQQLLGNNKVRAV 60
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHG-AP 118
+ D + SV TG + VPV + LGRIFN +G+P+D E +H AP
Sbjct: 61 SMTSTDGLKRGASVLDTGSPITVPVGVPTLGRIFNVLGEPVDELGPCNAESGLPIHRPAP 120
Query: 119 LNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEE 178
P F +TGI +D + RG K+ +F G+G+ L ++ + +
Sbjct: 121 SFTELETKPSVF-ETGIKVVDLLAPYKRGGKIGLFGGAGVGKTVLIMELINN---IAKAH 176
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIITPRMA 231
VF +G E N +E+ I+ + L ++P R+ A
Sbjct: 177 GGVSVFGGVGERTREGNDLYAEMKESKVIDEDKLENSKVALVYGQMNEPPGARMRVGLTA 236
Query: 232 LTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERA 291
LT+AEY VL+ + + + +A E+SA +P GY + T++ + ER
Sbjct: 237 LTMAEYFRDVNKQDVLLFIDHIFRFVQAGSEVSALLGSMPSAVGYQPTLATEMGVLQERI 296
Query: 292 GRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSL 351
+GSIT + + +P DD+T P P T + VLSR L KGIYP +D L S
Sbjct: 297 TSTN--EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDST 354
Query: 352 SRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRF 411
S +++ I +H AQ++ + L+D++A++G + LSE D+ + A +
Sbjct: 355 STMLQPEI----VGTEHYATAQRIKETLQRYKELQDIIAILGLDELSEDDRLTVSRARKV 410
Query: 412 EREFVAQGYY 421
ER F++Q ++
Sbjct: 411 ER-FLSQPFF 419
>gi|11467680 ATP synthase CF1 subunit a [Guillardia theta]
>gi|5915723|sp|O78475|ATPA_GUITH ATP SYNTHASE ALPHA
CHAIN >gi|3603005|gb|AAC35666.1| (AF041468) ATP synthase
CF1 subunit a [Guillardia theta]
Length = 502
Score = 143 bits (356), Expect = 5e-33
Identities = 124/422 (29%), Positives = 194/422 (45%), Gaps = 22/422 (5%)
Query: 10 TISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAR-ENLAIVQVFEGTRDLDV 68
T+ +I + V G+ V GE++E E +K G L+ +N+ +V + EG L+
Sbjct: 31 TVLQIGDGIARVYGLDQVMAGELLEFE----DKTIGIALNLESDNVGVVLMGEGRGILE- 85
Query: 69 KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 128
+SV+ TG+ +VPV LGR+ N +G PIDG +I + R + ++R
Sbjct: 86 -GSSVKATGKIAQVPVGKSYLGRVVNALGTPIDGKGDINCSETRLIESIAPGIISRKSVC 144
Query: 129 DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMG 188
+ IQTGI+AID M + RGQ+ I + +A K E V+ A+G
Sbjct: 145 EPIQTGITAIDSMIPIGRGQRELIIGDRQTGKSSVAIDTIINQK----GEDVVCVYVAVG 200
Query: 189 ITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLV 248
+ EE GA++ + ADDPA + I P +AEY ++ LV
Sbjct: 201 QKAATVASIVTTLEEKGALDYTCIVAANADDPATLQYIAPYTGAAIAEYFMYN-GQATLV 259
Query: 249 ILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMPI 306
I D++ A RE+S PGR +PG ++ + + ERA ++ K GS+T +P+
Sbjct: 260 IYDDLSKQASAYREMSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSDKLGGGSMTALPV 319
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 366
+ D++ IP IT+GQI LS +L GI P I+V S+SR +G +
Sbjct: 320 IETQAGDVSAYIPTNVISITDGQIFLSGDLFNAGIRPAINVGISVSR-----VGSAAQIK 374
Query: 367 DHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSI 426
Q+A +L A+ L + L + + L R RE + Q S+
Sbjct: 375 AMKQVAGKLKLELAQFAELEAFSQFASD--LDQATRNQLARGQRL-REILKQPQNSPISV 431
Query: 427 EE 428
EE
Sbjct: 432 EE 433
>sp|Q01396|ATPB_AEGCO ATP SYNTHASE BETA CHAIN >gi|343981|dbj|BAA01870.1| (D11098) 'ATP
synthase beta subunit' [Aegilops columnaris]
>gi|343984|dbj|BAA01872.1| (D11099) 'ATP synthase beta
subunit' [Aegilops crassa]
Length = 498
Score = 142 bits (355), Expect = 7e-33
Identities = 119/438 (27%), Positives = 198/438 (45%), Gaps = 41/438 (9%)
Query: 6 KEYSTISKIYGPLMIVEGVKG---VAYGEVVEIETESGEKRKGQVLDARE---NLAIVQV 59
K I +I GP++ V G Y +V ++ +K+ + ++ N + V
Sbjct: 18 KSTGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAV 77
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDG-GPEIIPEDRRDVHGAP 118
D ++ V TG L VPV LGRIFN +G+P+D GP V +
Sbjct: 78 AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGP---------VDSSA 128
Query: 119 LNPVARAYPR--------DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQ 170
P+ R+ P +TGI +D + RG K+ +F G+G+ L ++
Sbjct: 129 TFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN 188
Query: 171 AKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIE 223
+ + VF +G E N +E+G I + L ++P
Sbjct: 189 ---IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGA 245
Query: 224 RIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTD 283
R+ ALT+AEY VL+ + ++ + +A E+SA +P GY + T+
Sbjct: 246 RMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTE 305
Query: 284 LATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYP 343
+ ++ ER KKGSIT + + +P DD+T P P T + VLSR L KGIYP
Sbjct: 306 MGSLQERIAST--KKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYP 363
Query: 344 PIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKK 403
+D L S S +++ I +H + AQ++ + L+D++A++G + LSE D+
Sbjct: 364 AVDPLDSTSTMLQPRI----VGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEEDRL 419
Query: 404 YLEFADRFEREFVAQGYY 421
+ A + ER F++Q ++
Sbjct: 420 TVARARKIER-FLSQPFF 436
>gb|AAB17681.1| (L12251) putative ATPase [Sinorhizobium fredii]
Length = 450
Score = 142 bits (355), Expect = 7e-33
Identities = 108/354 (30%), Positives = 170/354 (47%), Gaps = 16/354 (4%)
Query: 81 KVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDG 140
+VP+ D+LGR+ + +P+DG E+ + R +HG NP+ R G+ A+DG
Sbjct: 107 EVPIGPDLLGRVIDSRCRPLDGKCEVKTTEVRPLHGRVPNPMTRRMVERPFPLGVRALDG 166
Query: 141 MNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKS 200
+ T GQ++ I+ G + L +QI + A + +FA + E F +
Sbjct: 167 LLTCGEGQRIGIYGEPGGGKSTLISQIVKGA------AADVFIFALICQRGREVREFVER 220
Query: 201 FEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEAL 260
+ RA++ + +D A ER MA +AEY + ++V ++L +T +C A+
Sbjct: 221 HLGEEGLRRAIVVVETSDRSATERAQCAPMATALAEYFR-EQGLRVALLLDSLTRFCRAM 279
Query: 261 REISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPD 320
REI A E P RRG+P ++ L + ERAG G++GSIT + + D PI +
Sbjct: 280 REIGLAAGEPPTRRGFPPSVFAALPGLLERAG--MGERGSITAFYTVLVEGDGTGDPIAE 337
Query: 321 LTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYA 380
+ I +G IVLSR L + +P IDVL S SR+M + + T + L A YA
Sbjct: 338 ESRGIVDGHIVLSRALAARSHFPAIDVLQSRSRVMDAVVSE--THRKAASFFRDLLARYA 395
Query: 381 EGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEETLDLGW 434
E L + V + TD+ + +EF+ Q E EET +GW
Sbjct: 396 ECEFLIN-VGEYKQGGDPLTDRAVASIGEL--KEFLRQSEDEVSDFEET--VGW 444
>gb|AAD50838.1| (AF168896) ATP synthase beta subunit [Colocasia esculenta]
Length = 496
Score = 142 bits (355), Expect = 7e-33
Identities = 120/434 (27%), Positives = 204/434 (46%), Gaps = 33/434 (7%)
Query: 6 KEYSTISKIYGPLMIVEGVKG----VAYGEVVEIETESGEKRKG--QVLDARENLAIVQV 59
K I++I GP++ V G + VV+ +G++ K +V N + V
Sbjct: 18 KNLGRIAQIIGPVLDVAFTPGKMPNIYNALVVKGRDTAGQQIKVTCEVQQLLGNNRVRAV 77
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
D ++ V TG L VPV LGRIFN +G+P+D + P D R +P+
Sbjct: 78 AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN---LGPVDTRTT--SPI 132
Query: 120 NPVARAYPR-----DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL 174
+ A A+ + +TGI +D + RG K+ +F G+G+ L ++ +
Sbjct: 133 HRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---I 189
Query: 175 GEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIIT 227
+ VF +G E N +E+G I + L ++P R+
Sbjct: 190 AKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRV 249
Query: 228 PRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATI 287
ALT+AE+ + VL+ + ++ + +A E+SA +P GY + T++ ++
Sbjct: 250 GLTALTMAEFFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSL 309
Query: 288 YERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDV 347
ER K+GSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 310 QERITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 367
Query: 348 LPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEF 407
L S S +++ I E+H + AQ++ + L+D++A++G + LSE D+ +
Sbjct: 368 LDSTSTMLQPRI----VGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEEDRLTVAR 423
Query: 408 ADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 424 ARKIER-FLSQPFF 436
>emb|CAB89742.1| (AJ235631) ATP synthase beta subunit [Trigonobalanus verticillata]
Length = 490
Score = 142 bits (355), Expect = 7e-33
Identities = 120/434 (27%), Positives = 203/434 (46%), Gaps = 33/434 (7%)
Query: 6 KEYSTISKIYGPLMIVEGVKG----VAYGEVVEIETESGEKRKG--QVLDARENLAIVQV 59
K I++I GP++ V G + VV+ +G++ +V N + V
Sbjct: 16 KNMGRIAQIIGPVLDVTFPPGKMPNIYNALVVKXRDTAGQQINVTCEVQQLLGNNRVRAV 75
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
D ++ V TG L VPV LGRIFN +G+P+D + P D R +P+
Sbjct: 76 AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN---LGPVDTRTT--SPI 130
Query: 120 NPVARAYPR-----DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL 174
+ A A+ + +TGI +D + RG K+ +F G+G+ L ++ +
Sbjct: 131 HRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---I 187
Query: 175 GEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIIT 227
+ VF +G E N +E+G I + L ++P R+
Sbjct: 188 AKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRV 247
Query: 228 PRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATI 287
ALT+AEY + VL+ + ++ + +A E+SA +P GY + T++ ++
Sbjct: 248 GLTALTMAEYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSL 307
Query: 288 YERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDV 347
ER K+GSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 308 QERITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 365
Query: 348 LPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEF 407
L S S +++ I E+H + AQ++ + L+D++A++G + LSE D+ +
Sbjct: 366 LDSTSTMLQPRI----VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVAR 421
Query: 408 ADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 422 ARKIER-FLSQPFF 434
>sp|P20858|ATPB_WHEAT ATP SYNTHASE BETA CHAIN >gi|67834|pir||PWWTB H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - wheat chloroplast
>gi|473690|gb|AAA84726.1| (M16843) ATP synthase beta
subunit [Triticum aestivum]
Length = 498
Score = 142 bits (354), Expect = 9e-33
Identities = 119/438 (27%), Positives = 198/438 (45%), Gaps = 41/438 (9%)
Query: 6 KEYSTISKIYGPLMIVEGVKG---VAYGEVVEIETESGEKRKGQVLDARE---NLAIVQV 59
K I +I GP++ V G Y +V ++ +K+ + ++ N + V
Sbjct: 18 KSTGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTDDKQINVTCEVQQLLGNNRVRAV 77
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDG-GPEIIPEDRRDVHGAP 118
D ++ V TG L VPV LGRIFN +G+P+D GP V +
Sbjct: 78 AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGP---------VDSSA 128
Query: 119 LNPVARAYPR--------DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQ 170
P+ R+ P +TGI +D + RG K+ +F G+G+ L ++
Sbjct: 129 TFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN 188
Query: 171 AKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIE 223
+ + VF +G E N +E+G I + L ++P
Sbjct: 189 ---IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGA 245
Query: 224 RIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTD 283
R+ ALT+AEY VL+ + ++ + +A E+SA +P GY + T+
Sbjct: 246 RMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTE 305
Query: 284 LATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYP 343
+ ++ ER KKGSIT + + +P DD+T P P T + VLSR L KGIYP
Sbjct: 306 MGSLQERIAST--KKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYP 363
Query: 344 PIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKK 403
+D L S S +++ I +H + AQ++ + L+D++A++G + LSE D+
Sbjct: 364 AVDPLDSTSTMLQPRI----VGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEEDRL 419
Query: 404 YLEFADRFEREFVAQGYY 421
+ A + ER F++Q ++
Sbjct: 420 TVARARKIER-FLSQPFF 436
>gi|7524659 H+-ATPase beta subunit [Pinus thunbergii]
>gi|1168580|sp|P41622|ATPB_PINTH ATP SYNTHASE BETA CHAIN
>gi|7436082|pir||T07492 H+-transporting ATP synthase (EC
3.6.1.34) beta chain - Japanese black pine chloroplast
>gi|1262653|dbj|BAA04370.1| (D17510) H+-ATPase beta
subunit [Pinus thunbergii]
Length = 492
Score = 142 bits (354), Expect = 9e-33
Identities = 120/439 (27%), Positives = 199/439 (44%), Gaps = 50/439 (11%)
Query: 1 MMEMSKEYSTISKIYGPLMIV-EGVKGVAYGEVVEIETESGE-KRKGQVLDARENLAIVQ 58
++++S + IY L++ +G G E++ G K + + A + L
Sbjct: 28 VLDVSFPPGNMPNIYNSLIVKGQGTAGQEIQVTCEVQQLLGNHKVRAVAMSATDGLT--- 84
Query: 59 VFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDG-GPEIIPEDRRDVHGA 117
G R +D TG L VPV LGRIFN +G+P+D GP V
Sbjct: 85 --RGMRVID--------TGAPLSVPVGGATLGRIFNVLGEPVDNLGP---------VDAG 125
Query: 118 PLNPVARAYPR--------DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIAR 169
+P+ R P +TGI +D + RG K+ +F G+G+ L ++
Sbjct: 126 ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 185
Query: 170 QAKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAI 222
+ + VF +G E N +E+G I+ + L ++P
Sbjct: 186 N---IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVALVYGQMNEPPG 242
Query: 223 ERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYT 282
R+ ALT+AEY + VL+ + ++ + +A E+SA +P GY + T
Sbjct: 243 ARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLST 302
Query: 283 DLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIY 342
++ ++ ER KKGSIT + + +P DD+T P P T ++ VLSR L KGIY
Sbjct: 303 EMGSLQERITST--KKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVLSRGLAAKGIY 360
Query: 343 PPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDK 402
P +D L S S +++ I E+H + AQ + + L+D++A+ G + LSE D+
Sbjct: 361 PAVDPLDSTSTMLQPWI----VGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEEDR 416
Query: 403 KYLEFADRFEREFVAQGYY 421
+ A + ER F++Q ++
Sbjct: 417 LIVARARKIER-FLSQPFF 434
>gb|AAD50893.1| (AF168951) ATP synthase beta subunit [Typha latifolia]
Length = 496
Score = 142 bits (354), Expect = 9e-33
Identities = 118/434 (27%), Positives = 202/434 (46%), Gaps = 33/434 (7%)
Query: 6 KEYSTISKIYGPLMIV---EGVKGVAYGEVVEIETESGEKRKGQVLDARE---NLAIVQV 59
K I++I GP++ V G Y +V ++ ++ + ++ N + V
Sbjct: 18 KNLGRITQIIGPVLDVVFPPGKMPNIYNALVVKSRDTAGQQMNLTCEVQQLLGNNRVRAV 77
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
D + V TG L VPV LGRIFN +G+P+D + P D R +P+
Sbjct: 78 AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN---LGPVDTRTT--SPI 132
Query: 120 NPVARAYPR-----DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL 174
+ A A+ + +TGI +D + RG K+ +F G+G+ L ++ +
Sbjct: 133 HRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---I 189
Query: 175 GEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIIT 227
+ VF +G E N +E+G I + L ++P R+
Sbjct: 190 AKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRV 249
Query: 228 PRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATI 287
ALT+AEY + VL+ + ++ + +A E+SA +P GY + T++ ++
Sbjct: 250 GLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSL 309
Query: 288 YERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDV 347
ER K+GSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 310 QERITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 367
Query: 348 LPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEF 407
L S S +++ I E+H + AQ++ + L+D++A++G + LSE D+ +
Sbjct: 368 LDSTSTMLQPWI----VGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEEDRLTVAR 423
Query: 408 ADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 424 ARKIER-FLSQPFF 436
>sp|O50288|ATPA_RICPR ATP SYNTHASE ALPHA CHAIN >gi|7436072|pir||E71641 ATP synthase alpha
chain (atpA) RP803 - Rickettsia prowazekii
>gi|3861330|emb|CAA15229.1| (AJ235273) ATP SYNTHASE
ALPHA CHAIN (atpA) [Rickettsia prowazekii]
Length = 512
Score = 141 bits (353), Expect = 1e-32
Identities = 121/426 (28%), Positives = 196/426 (45%), Gaps = 27/426 (6%)
Query: 11 ISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKT 70
I+KIYG + V GEVVE ++ KG +L+ EN ++ V G +
Sbjct: 38 IAKIYG-------LANVKSGEVVEFKSGV----KGLILNL-ENDSVGAVIMGDYSKVKQG 85
Query: 71 TSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDF 130
+V+ T + LKV V +LGR + +G PIDG +I+ ++ R + + R +
Sbjct: 86 DNVKRTKDVLKVLVGKALLGRTVDALGNPIDGKGDIVSKEYRHIEMKAPGIIERMSVSEP 145
Query: 131 IQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAK----VLGEEESFAVVFAA 186
+QTGI AID + + RGQ+ I +A K + E + ++ A
Sbjct: 146 VQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAVDTIINQKQAHSLTNESDKIYCIYVA 205
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
+G K E+ GA++ ++ L A + A + I P A ++ EY D M
Sbjct: 206 IGQKRSSVAQIVKKLEDAGAMDYTIVVLATASEAASLQFIAPYSACSMGEYFR-DNGMHA 264
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK--GSITQM 304
L+I D++ + A R+IS PGR YPG ++ + + ERA ++ +K GS+T +
Sbjct: 265 LIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKMSKEKGGGSLTAL 324
Query: 305 PILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRT 364
PI+ D++ IP IT+GQI L +L KGI P ++V S+SR +G
Sbjct: 325 PIIETQAGDVSAYIPTNVISITDGQIFLESDLFYKGIRPAVNVGISVSR-----VGSAAQ 379
Query: 365 REDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDR 424
+ Q+A + A+ R R+ + G + L K +E R E + Q Y
Sbjct: 380 IKAMKQVAGSVKLELAQFRE-RESFSQFGSD-LDPATKAQIEHGKRLV-EILKQDQYHPC 436
Query: 425 SIEETL 430
+EE +
Sbjct: 437 PVEEQI 442
>prf||1711264A CF1 ATPase:SUBUNIT=beta [Sorghum sp.]
Length = 498
Score = 141 bits (352), Expect = 2e-32
Identities = 113/429 (26%), Positives = 194/429 (44%), Gaps = 23/429 (5%)
Query: 6 KEYSTISKIYGPLMIVEGVKG---VAYGEVVEIETESGEKRKGQVLDARE---NLAIVQV 59
K I +I GP++ + G Y ++ ++ +K+ + ++ N + V
Sbjct: 18 KSVGRIDQIIGPVLDITFPPGKLPYIYNALIVKSRDTADKQINVTCEVQQLLGNNRVRAV 77
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
D ++ V TG L VPV LGRIFN +G+PID + +H +
Sbjct: 78 AMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSATFPIHRSAP 137
Query: 120 NPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEES 179
+ +TGI +D + RG K+ +F G+G+ L ++ + +
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---IAKAHG 194
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIITPRMAL 232
VF +G E N +E+G I + L ++P R+ AL
Sbjct: 195 GVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTAL 254
Query: 233 TVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAG 292
T+AEY VL+ + ++ + +A E+SA +P GY + T++ ++ ER
Sbjct: 255 TMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIT 314
Query: 293 RIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLS 352
KKGSIT + + +P DD+T P P T + VLSR L KGIYP +D L S S
Sbjct: 315 ST--KKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTS 372
Query: 353 RLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFE 412
+++ I +H + AQ++ + L+D++A++G + LSE D+ + A + E
Sbjct: 373 TMLQPRI----VGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEEDRLTVARARKIE 428
Query: 413 REFVAQGYY 421
R F++Q ++
Sbjct: 429 R-FLSQPFF 436
>sp|P42469|ATPB_STIAU ATP SYNTHASE BETA CHAIN >gi|587526|emb|CAA54206.1| (X76879) ATPase
beta-subunit [Stigmatella aurantiaca]
Length = 481
Score = 141 bits (352), Expect = 2e-32
Identities = 117/435 (26%), Positives = 198/435 (44%), Gaps = 28/435 (6%)
Query: 4 MSKEYSTISKI---YGPLMIVEGVKG---VAYGEVVEIETESGEKRKGQVLDARENLAIV 57
MS + +T+ KI GP++ VE G Y + T + ++ ++L
Sbjct: 1 MSAQVATVGKITQVLGPVIDVEFPPGGLPEVYTALKVTNTSISAEADNLTIEVAQHLGEN 60
Query: 58 QV----FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRD 113
V + T L + +V+ TG ++VPV LGRI N IG+P+D I
Sbjct: 61 MVRCISMDSTEGL-ARGQAVKNTGAPIQVPVGQGTLGRILNVIGEPVDERGPITSSQTWP 119
Query: 114 VHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKV 173
+H V + +TGI ID + RG K+ +F G+G+ L ++ V
Sbjct: 120 IHRPAPTFVDQDVRVQAFETGIKVIDLLGPYTRGGKIGLFGGAGVGKTVLLMELI--VNV 177
Query: 174 LGEEESFAVVFAAMGITYEEANFFKKSFEE-------TGAIERAVLFLNLADDPAIERII 226
E F+V FA +G E N +E T + VL ++P R
Sbjct: 178 AKERGGFSV-FAGVGERTREGNDLYHEMQEGNVSTPRTWMESQCVLVYGQMNEPPGARAR 236
Query: 227 TPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLAT 286
ALT+AEY VL+ + ++ + +A E+SA +P GY + T++
Sbjct: 237 VALSALTIAEYFRDMEGHDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMGA 296
Query: 287 IYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPID 346
+ ER KGS+T + + +P DD+T P P T + VL+R + GIYP +D
Sbjct: 297 LQERITSTT--KGSVTSVQAIYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVD 354
Query: 347 VLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLE 406
L S SR++ + +H +A+++ + + L+D++A++G + LSETDK +
Sbjct: 355 PLDSTSRILDPNV----VGPEHYAVARKVQGILQKYKELQDIIAILGMDELSETDKLTVA 410
Query: 407 FADRFEREFVAQGYY 421
A + ++ F++Q ++
Sbjct: 411 RARKIQK-FLSQPFH 424
>gi|11466794 atpB; ATPase beta subunit [Oryza sativa]
>gi|114559|sp|P12085|ATPB_ORYSA ATP SYNTHASE BETA CHAIN
>gi|67836|pir||PWRZB H+-transporting ATP synthase (EC
3.6.1.34) beta chain - rice chloroplast
>gi|11991|emb|CAA34003.1| (X15901) atpB; ATPase beta
subunit [Oryza sativa] >gi|344014|dbj|BAA00334.1|
(D00432) ATP synthetase beta subunit [Oryza sativa]
>gi|226612|prf||1603356AJ ATPase beta [Oryza sativa]
Length = 498
Score = 140 bits (350), Expect = 3e-32
Identities = 114/429 (26%), Positives = 194/429 (44%), Gaps = 23/429 (5%)
Query: 6 KEYSTISKIYGPLMIVEGVKG---VAYGEVVEIETESGEKRKGQVLDARE---NLAIVQV 59
K I +I GP++ V +G Y +V ++ K+ + ++ N + V
Sbjct: 18 KSTGRIDQIIGPVLDVTFPRGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAV 77
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
D ++ V TG L VPV LGRIFN +G+P+D + +H +
Sbjct: 78 AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSATFPIHRSAP 137
Query: 120 NPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEES 179
+ +TGI +D + RG K+ +F G+G+ L ++ + +
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---IAKAHG 194
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIITPRMAL 232
VF +G E N +E+G I + L ++P R+ AL
Sbjct: 195 GVSVFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTAL 254
Query: 233 TVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAG 292
T+AEY VL+ + ++ + +A E+SA +P GY + T++ ++ ER
Sbjct: 255 TMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIT 314
Query: 293 RIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLS 352
KKGSIT + + +P DD+T P P T + VLSR L KGIYP +D L S S
Sbjct: 315 ST--KKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTS 372
Query: 353 RLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFE 412
+++ I +H + AQ++ + L+D++A++G + LSE D+ + A + E
Sbjct: 373 TMLQPRI----VGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIE 428
Query: 413 REFVAQGYY 421
R F++Q ++
Sbjct: 429 R-FLSQPFF 436
>sp|Q08807|ATPB_CYACA ATP SYNTHASE BETA CHAIN >gi|480090|pir||S36412 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - red alga (Cyanidium
caldarium) >gi|396525|emb|CAA47241.1| (X66698)
H(+)-transporting ATP synthase [Cyanidium caldarium]
Length = 476
Score = 140 bits (350), Expect = 3e-32
Identities = 118/435 (27%), Positives = 198/435 (45%), Gaps = 30/435 (6%)
Query: 1 MMEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAR------ENL 54
M +++ IS+I GP++ +E G + +I K K + + +N
Sbjct: 1 MSTIAQNKGYISQIIGPVIDIEFPNGT----LPKIYNAISIKHKNKTITCEVQQLLGDNR 56
Query: 55 AIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDV 114
T L ++ TG + VPV LGRIFN +G+P+D I + + +
Sbjct: 57 VRTVAMNSTEGLQRGIEAID-TGSAITVPVGKCTLGRIFNVLGEPVDELGAISTDRKLPI 115
Query: 115 HGA-PLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKV 173
H A PL P F +TGI ID + RG K+ +F G+G+ L ++
Sbjct: 116 HRASPLFTQLETKPSIF-ETGIKVIDLLAPYKRGGKIGLFGGAGVGKTVLIMELINN--- 171
Query: 174 LGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERII 226
+ + VF +G E N +E+ I + L ++P R+
Sbjct: 172 IAKSHGGVSVFGGVGERTREGNDLYVEMKESKVINEKNLEESKVALVYGQMNEPPGARMR 231
Query: 227 TPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLAT 286
ALT+AEY + VL+ + ++ + +A E+SA +P GY + T++
Sbjct: 232 VGLTALTMAEYFRDNNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGA 291
Query: 287 IYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPID 346
+ ER K+GSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 292 LQERITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVD 349
Query: 347 VLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLE 406
L S S +++ I ++H AQ++ + L+D++A++G + LSE D+ +
Sbjct: 350 PLDSTSTMLQPQI----VGDEHYVTAQRVKENLQRYKELQDIIAILGLDELSEEDRLTVA 405
Query: 407 FADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 406 RARKIER-FLSQPFF 419
>gi|11467199 ATPase beta subunit [Zea mays] >gi|114551|sp|P00827|ATPB_MAIZE ATP
SYNTHASE BETA CHAIN >gi|67833|pir||PWZMB H+-transporting
ATP synthase (EC 3.6.1.34) beta chain - maize
chloroplast >gi|552732|gb|AAA85356.1| (J01421) coupling
factor beta-subunit [Zea mays]
>gi|902229|emb|CAA60293.1| (X86563) ATPase beta subunit
[Zea mays]
Length = 498
Score = 140 bits (349), Expect = 4e-32
Identities = 114/430 (26%), Positives = 195/430 (44%), Gaps = 25/430 (5%)
Query: 6 KEYSTISKIYGPLMIVEGVKG---VAYGEVVEIETESGEKRKGQVLDARENLAIVQV--- 59
K I +I GP++ + G Y ++ ++ +K+ + ++ L +V
Sbjct: 18 KSVGRIDQIIGPVLDITFPPGKLPYIYNALIVKSRDTADKQINVTCEVQQLLGNNRVRAV 77
Query: 60 -FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAP 118
T L ++ V TG L VPV LGRIFN +G+PID + +H +
Sbjct: 78 AMSATEGL-MRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSATFPIHRSA 136
Query: 119 LNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEE 178
+ +TGI +D + RG K+ +F G+G+ L ++ + +
Sbjct: 137 PAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---IAKAH 193
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIITPRMA 231
VF +G E N +E+G I + L ++P R+ A
Sbjct: 194 GGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTA 253
Query: 232 LTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERA 291
LT+AEY VL+ + ++ + +A E+SA +P GY + T++ ++ ER
Sbjct: 254 LTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI 313
Query: 292 GRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSL 351
KKGSIT + + +P DD+T P P T + VLSR L KGIYP +D L S
Sbjct: 314 TST--KKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDST 371
Query: 352 SRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRF 411
S +++ I +H + AQ++ + L+D++A++G + LSE D+ + A +
Sbjct: 372 STMLQPRI----VGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEEDRLTVARARKI 427
Query: 412 EREFVAQGYY 421
ER F++Q ++
Sbjct: 428 ER-FLSQPFF 436
>gi|7524904 ATP synthase CF1 beta chain [Chlorella vulgaris]
>gi|416678|sp|P32978|ATPB_CHLVU ATP SYNTHASE BETA CHAIN
>gi|7436084|pir||T07334 H+-transporting ATP synthase (EC
3.6.1.34) beta chain - Chlorella vulgaris chloroplast
>gi|391651|dbj|BAA01769.1| (D10997) ATPase F1 beta
subunit [Chlorella ellipsoidea]
>gi|2224498|dbj|BAA57982.1| (AB001684) ATP synthase CF1
beta chain [Chlorella vulgaris]
Length = 481
Score = 140 bits (349), Expect = 4e-32
Identities = 113/431 (26%), Positives = 193/431 (44%), Gaps = 25/431 (5%)
Query: 5 SKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENL-------AIV 57
+K I++I GP++ V G + T G+ GQ + + +
Sbjct: 7 TKSSGRITQIIGPVLDVSFPAG-KMPNIYNALTVGGKNEAGQEISVTCEVQQLLGDHCVR 65
Query: 58 QVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGA 117
V D ++ V +G+ L VPV LGRIFN +G+P+D + +D+ +H +
Sbjct: 66 AVAMSATDGLMRGMEVLDSGKPLNVPVGAATLGRIFNVLGEPVDNLGPVNTKDQLPIHRS 125
Query: 118 PLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEE 177
V ++GI +D + RG K+ +F G+G+ L ++ + +
Sbjct: 126 APAFVDLDTKLSIFESGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---IAKA 182
Query: 178 ESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIITPRM 230
VF +G E N +E+G I + L ++P R+
Sbjct: 183 HGGVSVFGGVGERTREGNDLYMEMKESGVINESNISESKVALVYGQMNEPPGARMRVGLT 242
Query: 231 ALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYER 290
ALT+AE+ VL+ + ++ + +A E+SA +P GY + T++ + ER
Sbjct: 243 ALTMAEFFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 302
Query: 291 AGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPS 350
K GSIT + + +P DD+T P P T + VLSR L KGIYP +D L S
Sbjct: 303 ITST--KDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLASKGIYPAVDPLDS 360
Query: 351 LSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADR 410
S +++ I + H Q AQ + + L+D++A++G + LSE D+ + A +
Sbjct: 361 TSTMLQPWI----VGDQHYQCAQNVKQTLQRYKELQDIIAILGLDELSEEDRLIVARARK 416
Query: 411 FEREFVAQGYY 421
ER F++Q ++
Sbjct: 417 IER-FLSQPFF 426
>gb|AAB88551.1| (AF036246) putative F1-ATP synthase alpha subunit [Rickettsia
prowazekii]
Length = 512
Score = 140 bits (349), Expect = 4e-32
Identities = 120/426 (28%), Positives = 196/426 (45%), Gaps = 27/426 (6%)
Query: 11 ISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKT 70
I+KIYG + V GEVVE ++ KG +L+ EN ++ V G +
Sbjct: 38 IAKIYG-------LANVKSGEVVEFKSGV----KGLILNL-ENDSVGAVIMGDYSKVKQG 85
Query: 71 TSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDF 130
+V+ T + LKV V +LGR + +G PIDG +I+ ++ R + + R +
Sbjct: 86 DNVKRTKDVLKVLVGKALLGRTVDALGNPIDGKGDIVSKEYRHIEMKAPGIIERMSVSEP 145
Query: 131 IQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAK----VLGEEESFAVVFAA 186
+QTGI AID + + RGQ+ I +A K + E + ++ A
Sbjct: 146 VQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAVDTIINQKQAHSLTNESDKIYCIYVA 205
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
+G K E+ GA++ ++ L A + A + I P A ++ EY D M
Sbjct: 206 IGQKRSSVAQIVKKLEDAGAMDYTIVVLATASEAASLQFIAPYSACSMGEYFR-DNGMHA 264
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK--GSITQM 304
L+I D++ + A R+IS PGR YPG ++ + + ERA ++ +K GS+T +
Sbjct: 265 LIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKMSKEKGGGSLTAL 324
Query: 305 PILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRT 364
PI+ D++ IP IT+GQI L +L KGI P ++V S+SR +G
Sbjct: 325 PIIETQAGDVSAYIPTNVISITDGQIFLESDLFYKGIRPAVNVGISVSR-----VGSAAQ 379
Query: 365 REDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDR 424
+ Q+A + A+ R R+ + G + L + +E R E + Q Y
Sbjct: 380 IKAMKQVAGSVKLELAQFRE-RESFSQFGSD-LDPATQAQIEHGKRLV-EILKQDQYHPC 436
Query: 425 SIEETL 430
+EE +
Sbjct: 437 PVEEQI 442
>gb|AAD00918.1| (AF001955) proton-translocating ATPase beta subunit [Streptococcus
sanguinis]
Length = 468
Score = 139 bits (348), Expect = 5e-32
Identities = 116/456 (25%), Positives = 205/456 (44%), Gaps = 24/456 (5%)
Query: 11 ISKIYGPLMIVEGVKGVAYGEVVE--IETESGEKRKGQVLDARENLA--IVQVF--EGTR 64
I+++ GP++ V G E+ + ++ EK+ VL+ L +V+ E T
Sbjct: 6 IAQVIGPVVDVAFASGDKLPEINNALVVYKNDEKKSKIVLEVALELGDGVVRTIAMESTD 65
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPID-GGPEIIPEDRRDVHGAPLNPVA 123
L + V TG + VPV + LGR+FN +G ID P +R+ +H
Sbjct: 66 GL-TRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDAPFADDAERQPIHKKAPTFDE 124
Query: 124 RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVV 183
+ + ++TGI ID + ++G K+ +F G+G+ L ++ + +E V
Sbjct: 125 LSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHN---IAQEHGGISV 181
Query: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243
F +G E N +E+G IE+ + ++P R+ LT+AEY
Sbjct: 182 FTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEG 241
Query: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQ 303
VL+ + ++ + +A E+SA +P GY + T++ + ER KKGS+T
Sbjct: 242 QDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTS 299
Query: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+ + +P DD T P P + L R+L + GIYP +D L S SR + I
Sbjct: 300 IQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALSPEI---- 355
Query: 364 TREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYED 423
E+H +A ++ L+D++A++G + LS+ +K + A R + ++
Sbjct: 356 VGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDDEKTLVARARRIQ-------FFLS 408
Query: 424 RSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
++ + S +P +E R KE++ H K
Sbjct: 409 QNFNVAEQFTGQPGSYVPVAETVRGFKEILEGKHDK 444
>sp|P23445|FLII_BACSU FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|67851|pir||PWBSAS
H+-transporting ATP synthase (EC 3.6.1.34) alpha chain
fliI, flagellar-specific, - Bacillus subtilis
>gi|580859|emb|CAA39523.1| (X56049) ORF 4 [Bacillus
subtilis] >gi|2633996|emb|CAB13497.1| (Z99112)
flagellar-specific ATP synthase [Bacillus subtilis]
Length = 440
Score = 139 bits (347), Expect = 6e-32
Identities = 117/435 (26%), Positives = 210/435 (47%), Gaps = 25/435 (5%)
Query: 1 MMEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEI--ETESGEKRKGQVLDARENLAIVQ 58
M + K Y + ++ G LMI + G++ I + +SG+ K +V+ +E ++
Sbjct: 15 MTDSYKRYGKVKRVIG-LMIESKGPASSIGDLCLIYAKGQSGKVIKAEVVGFQEENILLM 73
Query: 59 VFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGG--PEIIPEDRRDVHG 116
+ + + V TGE+L+V V ++G++ + G+P+D ++ P
Sbjct: 74 PYLEAASI-APGSIVEATGESLRVKVGTGLIGQVIDAFGEPLDESFCRKVSPVSTEQ--- 129
Query: 117 APLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE 176
+P NP+ R R+ + G+ +ID + T+ +GQ++ IF+GSG+ + L IA+Q
Sbjct: 130 SPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMGMIAKQT----- 184
Query: 177 EESFAVVFAAMGITYEEAN-FFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVA 235
E+ V A +G E F +K + G ++R+++ + +D PA+ R+ A +A
Sbjct: 185 -EADLNVIALVGERGREVREFIEKDLGKEG-LKRSIVVVATSDQPALMRLKAAYTATAIA 242
Query: 236 EYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIR 295
EY D V+ ++ +T A REI A E P +GY ++ L + ER G
Sbjct: 243 EYFR-DKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTGA-- 299
Query: 296 GKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLM 355
+ G+IT + + DD+ PI D I +G IVL R L KG +P ++VL S+SR+M
Sbjct: 300 NEHGTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSISRVM 359
Query: 356 KDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREF 415
+ K D ++L + Y L ++ A + S + ++F + +F
Sbjct: 360 SNISTKQHL--DAANKFRELLSTYQNSEDLINIGAY--KRGSSREIDEAIQFYPQL-IQF 414
Query: 416 VAQGYYEDRSIEETL 430
+ QG E +EE++
Sbjct: 415 LKQGTDEPALLEESI 429
>gb|AAA84588.1| (M31464) atpB gene product [Oryza sativa]
Length = 498
Score = 139 bits (347), Expect = 6e-32
Identities = 114/429 (26%), Positives = 193/429 (44%), Gaps = 23/429 (5%)
Query: 6 KEYSTISKIYGPLMIVEGVKG---VAYGEVVEIETESGEKRKGQVLDARE---NLAIVQV 59
K I +I GP++ V G Y +V ++ K+ + ++ N + V
Sbjct: 18 KSTGRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTEGKQINVTCEVQQLLGNNRVRAV 77
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
D ++ V TG L VPV LGRIFN +G+P+D + +H +
Sbjct: 78 AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSATFPIHRSAP 137
Query: 120 NPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEES 179
+ +TGI +D + RG K+ +F G+G+ L ++ + +
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---IAKAHG 194
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIITPRMAL 232
VF +G E N +E+G I + L ++P R+ AL
Sbjct: 195 GVSVFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTAL 254
Query: 233 TVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAG 292
T+AEY VL+ + ++ + +A E+SA +P GY + T++ ++ ER
Sbjct: 255 TMAEYFRDVIKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIT 314
Query: 293 RIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLS 352
KKGSIT + + +P DD+T P P T + VLSR L KGIYP +D L S S
Sbjct: 315 ST--KKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTS 372
Query: 353 RLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFE 412
+++ I +H + AQ++ + L+D++A++G + LSE D+ + A + E
Sbjct: 373 TMLQPRI----VGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIE 428
Query: 413 REFVAQGYY 421
R F++Q ++
Sbjct: 429 R-FLSQPFF 436
>gi|11466784 ATPase alpha subunit [Oryza sativa] >gi|114521|sp|P12084|ATPA_ORYSA
ATP SYNTHASE ALPHA CHAIN >gi|67827|pir||PWRZA
H+-transporting ATP synthase (EC 3.6.1.34) alpha chain -
rice chloroplast >gi|11979|emb|CAA33993.1| (X15901)
ATPase alpha subunit [Oryza sativa]
>gi|226696|prf||1603356X ATPase alpha [Oryza sativa]
Length = 507
Score = 139 bits (346), Expect = 8e-32
Identities = 124/439 (28%), Positives = 202/439 (45%), Gaps = 40/439 (9%)
Query: 27 VAYGEVVEIE-TESGEKRKGQVLDAR-ENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPV 84
+ GE++ E E E +G L+ +N+ IV + +G + + + V+ TG ++PV
Sbjct: 43 IGLGEIMSGELVEFAEGTRGIALNLESKNVGIVLMGDGL--MIQEGSFVKATGRIAQIPV 100
Query: 85 SMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTL 144
S LGR+ N + KPIDG EI+ + R + ++R + +QTG+ AID M +
Sbjct: 101 SEAYLGRVINALAKPIDGRGEIVASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI 160
Query: 145 VRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEET 204
RGQ+ I +A K + V+ A+G +F E
Sbjct: 161 GRGQRELIIGDRQTGKTAVATDTILNQK----GQDVICVYVAIGQRASSVAQVVTTFHEE 216
Query: 205 GAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREIS 264
GA+E ++ +AD PA + + P +AEY + + L+I D++ +A R++S
Sbjct: 217 GAMEYTIVVAEMADSPATLQYLAPYTGAALAEYFMY-RERHTLIIYDDLSKQAQAYRQMS 275
Query: 265 AAREEVPGRRGYPGYMYTDLATIYERAGRIRG--KKGSITQMPILTMPDDDITHPIPDLT 322
PGR YPG ++ + + ERA ++ +GS+T +PI+ D++ IP
Sbjct: 276 LLLRRPPGREAYPGDVFYLHSRLLERAAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNV 335
Query: 323 GYITEGQIVLSRELHRKGIYPPIDVLPSLSRL--------MKDGIGKGRTREDHPQLAQQ 374
IT+GQI LS +L GI P I+V S+SR+ MK GK + +LAQ
Sbjct: 336 ISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKSKL-----ELAQ- 389
Query: 375 LYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEE---TLD 431
+AE ++ + AL +T + L R RE + Q +EE T+
Sbjct: 390 ----FAELQAFAQFAS-----ALDKTSQNQLARGRRL-RELLKQSQANPLPVEEQIATIY 439
Query: 432 LGWELLSILPESELKRVKK 450
+G L E+ +VKK
Sbjct: 440 IGTR--GYLDSLEIGQVKK 456
>gi|11466709 atpB [Marchantia polymorpha] >gi|114552|sp|P06284|ATPB_MARPO ATP
SYNTHASE BETA CHAIN >gi|67831|pir||PWLVB H+-transporting
ATP synthase (EC 3.6.1.34) beta chain - liverwort
(Marchantia polymorpha) chloroplast
>gi|11679|emb|CAA28091.1| (X04465) atpB [Marchantia
polymorpha]
Length = 492
Score = 138 bits (345), Expect = 1e-31
Identities = 120/440 (27%), Positives = 200/440 (45%), Gaps = 41/440 (9%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKG----VAYGEVVEIETESGEKRKG--QVLDARENLAIV 57
++K +I+++ GP++ V G + +V+ + +GE+ +V N +
Sbjct: 14 VAKNIGSITQVIGPVLDVAFSPGKMPNIYNSLIVKDQNSAGEEINVTCEVQQLLGNNKVR 73
Query: 58 QVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDG-GPEIIPEDRRDVHG 116
V D ++ V TG L VPV LGRIFN +G+P+D GP V
Sbjct: 74 AVAMSATDGMMRGMKVIDTGAPLTVPVGEATLGRIFNVLGEPVDNLGP---------VEV 124
Query: 117 APLNPVARAYPR--------DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIA 168
P+ RA P +TGI +D + RG K+ +F G+G+ L ++
Sbjct: 125 TTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 184
Query: 169 RQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPA 221
+ + VF +G E N +E+ I + L ++P
Sbjct: 185 NN---ILKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPP 241
Query: 222 IERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMY 281
R+ ALT+AEY VL+ + ++ + +A E+SA +P GY +
Sbjct: 242 GARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLS 301
Query: 282 TDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGI 341
T++ T+ ER K+GSIT + + +P DD+T P P T + VLSR L KGI
Sbjct: 302 TEMGTLQERITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGI 359
Query: 342 YPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETD 401
YP +D L S S +++ I E+H + AQ + + L+D++A++G + LSE D
Sbjct: 360 YPAVDPLDSTSTMLQPWI----VGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED 415
Query: 402 KKYLEFADRFEREFVAQGYY 421
+ + A + ER F++Q ++
Sbjct: 416 RLTVARARKIER-FLSQPFF 434
>pir||B81438 H+-transporting ATP synthase (EC 3.6.1.34) flagellum-specific
Cj0195 [imported] - Campylobacter jejuni (strain NCTC
11168) >gi|6967688|emb|CAB72678.1| (AL139074)
flagellum-specific ATP synthase [Campylobacter jejuni]
Length = 461
Score = 138 bits (345), Expect = 1e-31
Identities = 117/432 (27%), Positives = 202/432 (46%), Gaps = 20/432 (4%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRK--GQVLDARENLAIVQVFE 61
+S + I+KI + + G+K G++V++ + E V++ +E + + F
Sbjct: 15 LSAIFGEITKISATSIEIRGLK-TGVGDIVKLVSNENENLNTLAMVVEIKEQFSYLSPFS 73
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
+ + + +++ VS ++LGR+ + +P DG I + AP++
Sbjct: 74 FIEGFKIGDRAF-ISDAGMQIGVSDELLGRVVDPFMRPKDGKGAIEATKYMPIMRAPIDA 132
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFA 181
+ R + G+ ID + T GQKL IF+GSG+ + L I + +K +
Sbjct: 133 MKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLMGMIVKNSKAPIK----- 187
Query: 182 VVFAAMGITYEEA-NFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
V A +G E F +K+ G ++ V+ + +DD A+ R A++VAEY
Sbjct: 188 -VVALIGERGREIPEFIQKNLG--GKLDDTVIIVATSDDSALMRKYGAFCAMSVAEYFK- 243
Query: 241 DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGS 300
+ VL I+ +T + A REI A E P +GYP + + L + ER G+ GK G+
Sbjct: 244 EQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGKEEGK-GT 302
Query: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG 360
IT + + DD++ PI D + I +G IVLSREL GIYPPI++ S SR+M D I
Sbjct: 303 ITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVMSDIIS 362
Query: 361 KGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
+H A++ + + L+ + + S+ + F ++F+ Q
Sbjct: 363 -----PEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLGQNP 417
Query: 421 YEDRSIEETLDL 432
E +TL+L
Sbjct: 418 EESFEFNQTLEL 429
>gi|11467760 CF1 beta subunit of ATP synthase [Nephroselmis olivacea]
>gi|5880689|gb|AAD54782.1|AF137379_5 (AF137379) CF1 beta
subunit of ATP synthase [Nephroselmis olivacea]
Length = 491
Score = 138 bits (344), Expect = 1e-31
Identities = 117/428 (27%), Positives = 193/428 (44%), Gaps = 28/428 (6%)
Query: 1 MMEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVF 60
+M+++ + ++ IY L IV+G G G+ V + E + ++ A A +
Sbjct: 21 VMDVAFQPGSMPNIYNAL-IVKGRNGA--GQEVSVVCEVQQLLGDGLVRAVSMSATDGLM 77
Query: 61 EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120
G D TG L VPV LGRIFN +G+P+D + E +H
Sbjct: 78 RGMEVTD--------TGRALSVPVGPTTLGRIFNVLGEPVDNMGPVGNEKTLPIHREAPA 129
Query: 121 PVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF 180
V +TGI +D + RG K+ +F G+G+ L ++ + +
Sbjct: 130 FVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---IAKAHGG 186
Query: 181 AVVFAAMGITYEEANFFKKSFEETGAIERA-------VLFLNLADDPAIERIITPRMALT 233
VF +G E N E+ I +A L ++P R+ ALT
Sbjct: 187 VSVFGGVGERTREGNDLYMEMCESKVINKADVKSSKVALVYGQMNEPPGARMRVGLTALT 246
Query: 234 VAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGR 293
+AEY + VL+ + ++ + +A E+SA +P GY + T++ + ER
Sbjct: 247 MAEYFRDVNNQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERITS 306
Query: 294 IRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSR 353
K GSIT + + +P DD+T P P T + VLSR L KGIYP +D L S S
Sbjct: 307 T--KDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTST 364
Query: 354 LMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFER 413
+++ I +DH AQ++ + L+D++A++G + LSE D+ + A + ER
Sbjct: 365 MLQPWI----LGDDHYGTAQRVKQTLQRYKELQDIIAILGLDELSEEDRMIVARARKIER 420
Query: 414 EFVAQGYY 421
F++Q ++
Sbjct: 421 -FLSQPFF 427
>sp|O47037|ATPB_PICAB ATP SYNTHASE BETA CHAIN >gi|7436111|pir||T14829 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Norway spruce
chloroplast >gi|2764568|emb|CAA04458.1| (AJ001004)
H+-ATP synthase subunit B [Picea abies]
Length = 488
Score = 138 bits (343), Expect = 2e-31
Identities = 118/435 (27%), Positives = 199/435 (45%), Gaps = 42/435 (9%)
Query: 1 MMEMSKEYSTISKIYGPLMIV-EGVKGVAYGEVVEIETESGE-KRKGQVLDARENLAIVQ 58
++++S + IY L++ +G G E++ G K + + A + L
Sbjct: 28 VLDVSFPPGNMPNIYNSLIVKGQGTAGQEIQVTCEVQQLLGNHKVRAVAMSATDGLT--- 84
Query: 59 VFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAP 118
G R +D TG L VPV LGRIFN +G+P+D + P D R +P
Sbjct: 85 --RGMRVID--------TGAPLSVPVGGATLGRIFNVLGEPVDN---LGPVDARIT--SP 129
Query: 119 LNPVARAYPR-----DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKV 173
++ A A+ +TGI +D + RG K+ +F G+G+ L ++
Sbjct: 130 IHRSAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN--- 186
Query: 174 LGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERII 226
+ + VF +G E N +E+G I+ + L ++P R+
Sbjct: 187 IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQNISESKVALVYGQMNEPPGARMR 246
Query: 227 TPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLAT 286
ALT+AEY + VL + ++ + +A E+SA +P GY + T++ +
Sbjct: 247 VGLTALTMAEYFRDVNEQDVLSFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGS 306
Query: 287 IYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPID 346
+ ER K+GSIT + + +P DD+T P P T + V SR L KGIYP +D
Sbjct: 307 LQERITST--KRGSITSIQAVYVPADDLTDPAPATTFAHLDATTVPSRGLAAKGIYPAVD 364
Query: 347 VLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLE 406
L S S +++ I E+H + AQ + + L+D++A+ G + LSE D+ +
Sbjct: 365 PLDSTSTMLQPWI----VGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEEDRLIVA 420
Query: 407 FADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 421 RARKIER-FLSQPFF 434
>sp|P55987|ATPA_HELPY ATP SYNTHASE ALPHA CHAIN >gi|7436075|pir||F64661 ATP synthase F1,
subunit alpha - Helicobacter pylori (strain 26695)
>gi|2314285|gb|AAD08176.1| (AE000619) ATP synthase F1,
subunit alpha (atpA) [Helicobacter pylori 26695]
Length = 503
Score = 137 bits (341), Expect = 3e-31
Identities = 120/410 (29%), Positives = 189/410 (45%), Gaps = 20/410 (4%)
Query: 21 VEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETL 80
V G+ GV EV+E ET KG + E+ V VF ++ + TSV+ T +
Sbjct: 42 VYGLNGVMSYEVLEFETGD----KGVAANLEEDSVGVIVFGFGNNIK-EGTSVKRTKSLM 96
Query: 81 KVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDG 140
KVPV ++GR+ N +G+PIDG EI + + + R + +QTGI AID
Sbjct: 97 KVPVGDAVVGRVLNALGEPIDGKGEIETNEFSLIEQKAPGIMDRKSVHEPLQTGIKAIDA 156
Query: 141 MNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKS 200
+ + RGQ+ I +A A + + ++ ++ A+G +
Sbjct: 157 LVPIGRGQRELIIGDKQTGKTTVAID----AIINQKGQNVICIYVAIGQKESTVAQVVRK 212
Query: 201 FEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEAL 260
EE GA+E +V+ A D A + + P + + EY D+ L+I D++ + A
Sbjct: 213 LEEYGAMEYSVVINASASDSAAMQYLAPYSGVAMGEYFR-DHARHALIIYDDLSKHAVAY 271
Query: 261 REISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK--GSITQMPILTMPDDDITHPI 318
REIS PGR +PG ++ + + ERA ++ +K GS+T +PI+ D++ I
Sbjct: 272 REISLILRRPPGREAFPGDVFYIHSRLLERAAKLCDEKGAGSLTALPIVETQAGDVSAYI 331
Query: 319 PDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAA 378
P IT+GQI L +L GI P I+V S+SR +G + Q++ L
Sbjct: 332 PTNIISITDGQIFLETDLFYSGIRPAINVGLSVSR-----VGGAAQIKATKQVSGTLRLD 386
Query: 379 YAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEE 428
A+ R L+ + L E KK LE R E + Q Y IE+
Sbjct: 387 LAQYRELQAFTQFASD--LDEASKKQLERGQRMV-EVLKQAPYSPLPIEK 433
>sp|P08215|ATPA_PEA ATP SYNTHASE ALPHA CHAIN >gi|67826|pir||PWPMA H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - garden pea
chloroplast >gi|12143|emb|CAA29352.1| (X05917) atpA
protein [Pisum sativum]
Length = 501
Score = 136 bits (340), Expect = 4e-31
Identities = 120/451 (26%), Positives = 209/451 (45%), Gaps = 29/451 (6%)
Query: 10 TISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAR-ENLAIVQVFEGTRDLDV 68
T+ ++ + + G+ V GE+VE + E G L+ +N+ +V + +G +
Sbjct: 31 TVLQVGDGIARIYGLDDVMAGELVEFK----EGTVGIALNLESKNVGVVLMGDGL--MIQ 84
Query: 69 KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 128
+ +SV+ TG ++PVS LGR+ N + KPIDG EI + R + ++R
Sbjct: 85 EGSSVKATGRIAQIPVSEGYLGRVVNALAKPIDGRGEISTSESRLIESPAPGIISRRSVY 144
Query: 129 DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEE-ESFAVVFAAM 187
+ +QTG+ AID M + RGQ+ I + Q +L ++ ++ V+ A+
Sbjct: 145 EPLQTGLIAIDSMIPIGRGQRELI-----IGDRQTGKTAVATDTILNQQGQNLVCVYVAI 199
Query: 188 GITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVL 247
G + +E GA+E ++ AD PA + + P +AEY + + L
Sbjct: 200 GQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMY-RERHTL 258
Query: 248 VILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMP 305
+I D + + +A R++S PGR YPG ++ + + ER ++ + +GS+T +P
Sbjct: 259 IIYDDPSKHAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERVAKLSSQLGEGSMTALP 318
Query: 306 ILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTR 365
I+ D++ IP IT+GQI LS +L GI P I+V S+SR +G
Sbjct: 319 IVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSR-----VGSAAQI 373
Query: 366 EDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRS 425
+ Q+A +L A+ L + L + + L R RE + Q +
Sbjct: 374 KAMKQVAGKLKLELAQFAELEAFAQFASD--LDKATQNQLARGQRL-RELLKQSQSAPLT 430
Query: 426 IEE---TLDLGWELLSILPESELKRVKKEMI 453
+EE T+ G S L E+ +V+K ++
Sbjct: 431 VEEQIITIYTGTN--SYLDSVEIAQVRKFIV 459
>sp|Q31794|ATPB_ANTFO ATP SYNTHASE BETA CHAIN >gi|2760294|dbj|BAA24160.1| (D86545) ATPase
beta subunit [Anthoceros formosae]
Length = 492
Score = 136 bits (340), Expect = 4e-31
Identities = 116/431 (26%), Positives = 193/431 (43%), Gaps = 23/431 (5%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKG----VAYGEVVEIETESGEKRKG--QVLDARENLAIV 57
+SK IS+I GP++ V G + +V + +G++ +V N +
Sbjct: 14 ISKNVGHISQIIGPVLDVTFPPGKMPNIYNSLIVRGQNPAGQEINVTCEVQQLLGNNKVR 73
Query: 58 QVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGA 117
V D + V TG L VPV LGRIFN +G+P+D I +H +
Sbjct: 74 AVAMSATDGLTRGMKVTDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGAIDVSTTFPIHRS 133
Query: 118 PLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEE 177
+TGI +D + RG K+ +F G+G+ L ++ + +
Sbjct: 134 APAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---IAKA 190
Query: 178 ESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIITPRM 230
VF +G E N +E+ I + L ++P R+
Sbjct: 191 HGGVSVFGGVGERTREGNDLYMEMKESKVINEQDISESKVALVYGQMNEPPGARMRVGLT 250
Query: 231 ALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYER 290
ALT+AEY VL+ + ++ + +A E+SA +P GY + T++ ++ ER
Sbjct: 251 ALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQER 310
Query: 291 AGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPS 350
K+GSIT + + +P DD+T P P T + VLSR L KGIYP +D L S
Sbjct: 311 ITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDS 368
Query: 351 LSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADR 410
S +++ I E+H + AQ + + L+D++A++G + LSE D+ + A +
Sbjct: 369 TSTMLQPWI----VGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARK 424
Query: 411 FEREFVAQGYY 421
ER F++Q ++
Sbjct: 425 IER-FLSQPFF 434
>sp|P45825|ATPA_MYCLE ATP SYNTHASE ALPHA CHAIN >gi|7436108|pir||T09976 H+-transporting
ATP synthase (EC 3.6.1.34) alpha chain - Mycobacterium
leprae >gi|699348|gb|AAA63109.1| (U15186) ATP synthase
alpha chain [Mycobacterium leprae]
Length = 558
Score = 136 bits (339), Expect = 5e-31
Identities = 126/462 (27%), Positives = 206/462 (44%), Gaps = 32/462 (6%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLA---IVQVFEG 62
+E T+ + + VEG+ V E++E G +L NL + V G
Sbjct: 29 EEVGTVVDVGDSIAHVEGLPSVMTQELLEFP--------GGILGVALNLDEHNVGAVILG 80
Query: 63 TRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPV 122
+ + V+ TG+ L VPV +GR+ N +G+PIDG +I E RR + + V
Sbjct: 81 DFENIKEGQKVKRTGDVLSVPVGEAFMGRVVNPLGQPIDGRGDIEAEARRALELQAPSVV 140
Query: 123 ARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQI---ARQAKVLGE-EE 178
R ++ +QTGI AID M + RGQ+ + + RQ G+ +
Sbjct: 141 QRQSVKEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCVDTILNQRQNWESGDPKR 200
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
V+ A+G +++ EE GA++ + LA D A + + P +A++
Sbjct: 201 QVRCVYVAIGQKGTTIASVRRALEEGGAMDYTTIVAALASDSAGFKWLAPYTGSAIAQHW 260
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK- 297
+D VL++ D+T EA R IS PGR YPG ++ + + ER ++
Sbjct: 261 MYD-GKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLADHL 319
Query: 298 -KGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMK 356
GS+T +PI+ +DI+ IP IT+GQ L +L +G+ P I+V S+SR
Sbjct: 320 GGGSLTGLPIIETKANDISAYIPTNVISITDGQCFLETDLFNQGVRPAINVGVSVSR--- 376
Query: 357 DGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFV 416
+G + ++A L ++ R L A + L T K LE R E +
Sbjct: 377 --VGGAAQIKAMKEVAGSLRLDLSQYRELEAFAAFASD--LDATSKAQLERGARLV-ELL 431
Query: 417 AQGYYEDRSIEET-----LDLGWELLSILPESELKRVKKEMI 453
Q Y+ +EE L G L S+ P +++R + E++
Sbjct: 432 KQPQYQPMPVEEQVISLFLGTGGHLDSV-PVGDVRRFETELL 472
>dbj|BAA28167.1| (AB012085) Cl--pumping ATPase a subunit [Acetabularia acetabulum]
Length = 502
Score = 136 bits (338), Expect = 7e-31
Identities = 124/456 (27%), Positives = 205/456 (44%), Gaps = 40/456 (8%)
Query: 10 TISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAR-ENLAIVQVFEGTRDLDV 68
T+ ++ + + G++ V GE++E + + G L+ +N+ V + EG +
Sbjct: 31 TVFQVGDGIARIYGLEKVMAGELLEFD----DGTIGIALNLETKNVGAVLMGEGLAVQE- 85
Query: 69 KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 128
+SVR TG+ ++PV + LGR+ N + +PIDG EI + R + A ++R
Sbjct: 86 -GSSVRATGKIAQIPVGDEYLGRVVNSLARPIDGKGEINTTETRLIESAAPGIISRKSVH 144
Query: 129 DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMG 188
+ +QTG+ A+D M + RGQ+ I +A K G V+ A+G
Sbjct: 145 EPLQTGLVAVDAMIPIGRGQRELIIGDRQTGKTAIATDTILNQKGKG----VICVYVAIG 200
Query: 189 ITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLV 248
+ +E GA++ ++ AD PA + + P ++AEY + L
Sbjct: 201 QKASSIAQVVNTLQERGAMDYTIIVAATADTPATLQYLAPYTGASLAEYFMYK-GKHTLA 259
Query: 249 ILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMPI 306
I D++ +A RE+S PGR YPG ++ + + ERA ++ + GS+T +PI
Sbjct: 260 IYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDELGSGSMTALPI 319
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL--------MKDG 358
+ + D++ IP IT+GQI LS ++ GI P I+V S+SR+ MK
Sbjct: 320 VETQEGDVSAYIPTNVISITDGQIFLSADIFNAGIRPAINVGISVSRVGSAAQPKAMKKV 379
Query: 359 IGKGRTR-------EDHPQLAQQLYAA----YAEGRSLRDLVAVVGEEALSETDKKYLEF 407
GK + E Q A L A A G+ LR+L+ LS D+ +
Sbjct: 380 AGKLKLELAQFAELEAFSQFASDLDQATQNQLARGQRLRELLKQPQASPLSLEDQVATIY 439
Query: 408 ADRFEREFVAQGYYEDRSIEETLDLGWELLSILPES 443
A GY + SI++ EL L +S
Sbjct: 440 AG-------TNGYLDKISIDQVRPFLVELRQYLAQS 468
>dbj|BAA90397.1| (AB037543) ATP synthase beta subunit [Oryza sativa]
Length = 498
Score = 136 bits (338), Expect = 7e-31
Identities = 113/429 (26%), Positives = 192/429 (44%), Gaps = 23/429 (5%)
Query: 6 KEYSTISKIYGPLMIVEGVKG---VAYGEVVEIETESGEKRKGQVLDARE---NLAIVQV 59
K I +I GP++ V G Y +V ++ K+ + ++ N + V
Sbjct: 18 KSTGRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAV 77
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
D ++ V T L VPV LGRIFN +G+P+D + +H +
Sbjct: 78 AMSATDGLMRGMEVIDTVAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSATFPIHRSAP 137
Query: 120 NPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEES 179
+ +TGI +D + RG K+ +F G+G+ L ++ + +
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN---IAKAHG 194
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIITPRMAL 232
VF +G E N +E+G I + L ++P R+ AL
Sbjct: 195 GVSVFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTAL 254
Query: 233 TVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAG 292
T+AEY VL+ + ++ + +A E+SA +P GY + T++ ++ ER
Sbjct: 255 TMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIT 314
Query: 293 RIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLS 352
KKGSIT + + +P DD+T P P T + VLSR L KGIYP +D L S S
Sbjct: 315 ST--KKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTS 372
Query: 353 RLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFE 412
+++ I +H + AQ++ + L+D++A++G + LSE D+ + A + E
Sbjct: 373 TMLQPRI----VGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIE 428
Query: 413 REFVAQGYY 421
R F++Q ++
Sbjct: 429 R-FLSQPFF 436
>gb|AAC38383.1| (AF022236) EscN [Escherichia coli]
Length = 446
Score = 135 bits (337), Expect = 9e-31
Identities = 102/360 (28%), Positives = 179/360 (49%), Gaps = 20/360 (5%)
Query: 75 FTGETLKVPVSMDMLGRIFNGIGKPIDGG--PEIIPEDRRDVHGAPLNPVARAYPRDFIQ 132
+ G+ K+ V +LGR+ +GIG+P++ +P +R ++ P +P+ R
Sbjct: 97 YQGDEFKIRVGDALLGRLIDGIGRPMESNIVAPYLPFER-SLYAEPPDPLLRQVIDQPFI 155
Query: 133 TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYE 192
G+ AIDG+ T GQ++ IF+GSG+ + L I A + +V A +G
Sbjct: 156 LGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGAS------ADIIVLALIGERGR 209
Query: 193 EANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTD 252
E N F ++ + + VL + +D PA+ER+ A T+AEY D VL+++
Sbjct: 210 EVNEFLALLPQS-TLSKCVLVVTTSDRPALERMKAAFTATTIAEYFR-DQGKNVLLMMDS 267
Query: 253 MTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDD 312
+T Y A R++ A E R G+P +++ L + ERAG KGSIT + + + D
Sbjct: 268 VTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGP--APKGSITAIYTVLLESD 325
Query: 313 DITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLA 372
++ PI D I +G IVL+REL + +P ID+ S SR+M + + +H + A
Sbjct: 326 NVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVV-----TSEHLRAA 380
Query: 373 QQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADR-FEREFVAQGYYEDRSIEETLD 431
+ A +++ +L+ +GE + + + +R + F+ Q + S E+T++
Sbjct: 381 AECKKLIATYKNV-ELLIRIGEYTMGQDPEADKAIKNRKLIQNFIQQSTKDISSYEKTIE 439
>pir||A81427 H+-transporting ATP synthase (EC 3.6.1.34) F1 sector alpha chain
Cj0105 [imported] - Campylobacter jejuni (strain NCTC
11168) >gi|6967599|emb|CAB72589.1| (AL139074) ATP
synthase F1 sector alpha subunit [Campylobacter jejuni]
Length = 501
Score = 135 bits (337), Expect = 9e-31
Identities = 117/417 (28%), Positives = 188/417 (45%), Gaps = 26/417 (6%)
Query: 21 VEGVKGVAYGEVVEIETESGEKRKGQVLDAREN---LAIVQVFEGTRDLDVKTTSVRFTG 77
V G+K + GE+VE E KG L+ E+ + I+ EG ++ SV+
Sbjct: 41 VYGLKNIMAGEMVEFENGD----KGMALNLEESSVGIVILGKGEGLKE----GASVKRLK 92
Query: 78 ETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISA 137
+ LKVPV ++GR+ N +G+PID I + R V +AR + + TGI A
Sbjct: 93 KLLKVPVGEALIGRVVNALGEPIDAKGVINANEYRFVEEKAKGIMARKSVHEPLHTGIKA 152
Query: 138 IDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFF 197
ID + + RGQ+ I +A + + ++ A+G
Sbjct: 153 IDALVPIGRGQRELIIGDRQTGKTTVAVDTI----ISQRGQGVICIYVAIGQKQSTVAQV 208
Query: 198 KKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYC 257
K EE GA+E ++ A DPA + + P +T+ E+ D L++ D++ +
Sbjct: 209 VKRLEEHGAMEYTIVVNAGASDPAALQYLAPYTGVTMGEFFR-DNAKHALIVYDDLSKHA 267
Query: 258 EALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMPILTMPDDDIT 315
A RE+S PGR YPG ++ + + ERA ++ + GS+T +PI+ D++
Sbjct: 268 VAYREMSLILRRPPGREAYPGDVFYLHSRLLERASKLNDELGAGSLTALPIIETQAGDVS 327
Query: 316 HPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQL 375
IP IT+GQI L +L GI P I+V S+SR +G + Q++ L
Sbjct: 328 AYIPTNVISITDGQIFLETDLFNSGIRPAINVGLSVSR-----VGGAAQIKATKQVSGTL 382
Query: 376 YAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEETLDL 432
A+ R L+ + L E +K LE R E + Q Y S+E+ + L
Sbjct: 383 RLDLAQYRELQAFAQFASD--LDEASRKQLERGQRMV-ELLKQPPYSPLSVEKQVVL 436
>gi|11467189 ATPase alpha subunit [Zea mays] >gi|114518|sp|P05022|ATPA_MAIZE ATP
SYNTHASE ALPHA CHAIN >gi|279574|pir||PWZMA
H+-transporting ATP synthase (EC 3.6.1.34) alpha chain -
maize chloroplast >gi|12403|emb|CAA28876.1| (X05255)
CF(1) alpha subunit (AA 1-507) [Zea mays]
>gi|552733|gb|AAA84474.1| (M27557) phosphorylation
coupling factor proteolipid subunit (atpH) [Zea mays]
>gi|902219|emb|CAA60283.1| (X86563) ATPase alpha subunit
[Zea mays]
Length = 507
Score = 135 bits (336), Expect = 1e-30
Identities = 123/439 (28%), Positives = 201/439 (45%), Gaps = 40/439 (9%)
Query: 27 VAYGEVVEIE-TESGEKRKGQVLDAR-ENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPV 84
+ GE++ E E E +G L+ +N+ IV + +G + + + V+ TG ++PV
Sbjct: 43 IGLGEIMSGELVEFAEGTRGIALNLESKNVGIVLMGDGL--MIQEGSFVKATGRIAQIPV 100
Query: 85 SMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTL 144
S LGR+ N + KPIDG EI+ + R + ++R + +QTG+ AID M +
Sbjct: 101 SEAYLGRVINALAKPIDGRGEIVASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI 160
Query: 145 VRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEET 204
RGQ+ I +A K + V+ A+G +F E
Sbjct: 161 GRGQRELIIGDRQTGKTAVATDTILNQK----GQDVICVYVAIGQRASSVAQVVTTFHEE 216
Query: 205 GAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREIS 264
GA+E ++ +AD PA + + P +AEY + + L+I D++ +A R++S
Sbjct: 217 GAMEYTIVVAEMADSPATLQYLAPYTGAALAEYFMY-RERHTLIIYDDLSKQAQAYRQMS 275
Query: 265 AAREEVPGRRGYPGYMYTDLATIYERAGRIRG--KKGSITQMPILTMPDDDITHPIPDLT 322
PGR Y G ++ + + ERA ++ +GS+T +PI+ D++ IP
Sbjct: 276 LLLRRPPGREAYLGDVFYLHSRLLERAAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNV 335
Query: 323 GYITEGQIVLSRELHRKGIYPPIDVLPSLSRL--------MKDGIGKGRTREDHPQLAQQ 374
IT+GQI LS +L GI P I+V S+SR+ MK GK + +LAQ
Sbjct: 336 ISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKSKL-----ELAQ- 389
Query: 375 LYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEE---TLD 431
+AE ++ + AL +T + L R RE + Q +EE T+
Sbjct: 390 ----FAELQAFAQFAS-----ALDKTSQNQLARGRRL-RELLKQSQSNPLPVEEQVATIY 439
Query: 432 LGWELLSILPESELKRVKK 450
G L E+++VKK
Sbjct: 440 TGTR--GYLDSLEIEQVKK 456
>sp|Q02848|ATPA_ANTSP ATP SYNTHASE ALPHA CHAIN >gi|485445|pir||S26962 H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - red alga
(Antithamnion sp.) chloroplast (strain LB 95.79)
>gi|14177|emb|CAA44984.1| (X63382) atpA [Antithamnion
sp.]
Length = 505
Score = 135 bits (336), Expect = 1e-30
Identities = 124/444 (27%), Positives = 201/444 (44%), Gaps = 21/444 (4%)
Query: 10 TISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAR-ENLAIVQVFEGTRDLDV 68
T+ ++ + V G+ V GE+++ E + E+ G L+ +N+ +V + +G L+
Sbjct: 31 TVLQVGDGIARVYGLDEVMAGELLQFEDK--EQTVGIALNLESDNVGVVLMGDGRNILE- 87
Query: 69 KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 128
+SV+ TG+ ++PV + LGR+ N + KPID +D R + + R
Sbjct: 88 -GSSVKSTGKIAQIPVGDEFLGRVVNPLAKPIDAKGTPSVQDTRLIESYAPGIIGRQSVC 146
Query: 129 DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMG 188
+ +QTGI+AID M + RGQ+ I +A K + V+ A+G
Sbjct: 147 EPLQTGITAIDSMIPIGRGQRELIIGDRQTGKTTVALDTIINQK----GQDVVCVYVAIG 202
Query: 189 ITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLV 248
+ EE GA+E ++ AD+PA + I P +AEY + LV
Sbjct: 203 QKASSVAQVVSTLEEKGALEYTIVVAANADEPATLQYIAPYTGAALAEYFMYK-GKATLV 261
Query: 249 ILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMPI 306
I D+T +A R++S PGR YPG ++ + + ERA ++ GS+T +PI
Sbjct: 262 IYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNQDLGGGSMTALPI 321
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 366
+ D++ IP IT+GQI LS +L GI P I+V S+SR +G +
Sbjct: 322 IETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSR-----VGSAAQIK 376
Query: 367 DHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSI 426
Q+A +L A+ L + L + + L R RE + Q +
Sbjct: 377 AMKQVAGKLKLELAQFAELEAFSQFASD--LDKATQNQLARGQRL-REILKQAQNSPIPV 433
Query: 427 EE-TLDLGWELLSILPESELKRVK 449
EE T + + L E EL +VK
Sbjct: 434 EEQTAIIYAGINGYLDEVELSQVK 457
>sp|P13357|ATPB_CYTLY ATP SYNTHASE BETA CHAIN >gi|477688|pir||B46570 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Cytophaga lytica
(strain DSM 2039) >gi|145031|gb|AAA23334.1| (M22535)
ATP-synthetase beta subunit [Cellulophaga lytica]
Length = 502
Score = 135 bits (336), Expect = 1e-30
Identities = 121/457 (26%), Positives = 202/457 (43%), Gaps = 52/457 (11%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKGVAYGEV---VEIETESGEKRKGQVLDARENLAIVQVF 60
MSK +S+I GP++ VE GV ++ +EI+ G +V + +
Sbjct: 1 MSKVTGKVSQIIGPVIDVEFQAGVDLPKIYDSLEIKKADGSILVLEVQSHIGENTVRTIS 60
Query: 61 EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120
+ D + V TG +++PV D+ GR+FN IG IDG + P+ +D G P++
Sbjct: 61 MDSSDGLSRGAEVNATGSAIQMPVGDDVYGRLFNVIGDAIDGLGNL-PKSGKD--GLPIH 117
Query: 121 PVARAYP-----RDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLG 175
A + + + TGI ID + +G K+ +F G+G+ L ++ +
Sbjct: 118 REAPKFEDLSTSTEVLFTGIKVIDLIEPYAKGGKIGLFGGAGVGKTVLIQELINN---IA 174
Query: 176 EEESFAVVFAAMGITYEEANFFKKSFEETGAIE--------------------------- 208
+ VFA +G E N + E+G I+
Sbjct: 175 KGHGGLSVFAGVGERTREGNDLLREMLESGIIKYGDDFMHSMEEGGWDLSKVDKSVMKDS 234
Query: 209 RAVLFLNLADDPAIERIITPRMALTVAEYL----AFDYDMQVLVILTDMTNYCEALREIS 264
+A ++P R LT+AEY VL + ++ + +A E+S
Sbjct: 235 KATFVFGQMNEPPGARARVALSGLTIAEYFRDGAGEGQGKDVLFFVDNIFRFTQAGSEVS 294
Query: 265 AAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGY 324
A +P GY + T++ + ER K+GSIT + + +P DD+T P P T
Sbjct: 295 ALLGRMPSAVGYQPTLATEMGAMQERITST--KRGSITSVQAVYVPADDLTDPAPATTFA 352
Query: 325 ITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRS 384
+ VLSR++ GIYP +D L S SR++ I +DH AQ++ +
Sbjct: 353 HLDATTVLSRKIAELGIYPAVDPLDSTSRILAPEI----LGKDHYSCAQRVKELLQRYKE 408
Query: 385 LRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
L+D++A++G E LSE DK + A R +R F++Q ++
Sbjct: 409 LQDIIAILGMEELSEEDKMAVGRARRVQR-FLSQPFH 444
>gb|AAC31513.1| (AF071034) L0034 [Escherichia coli]
Length = 446
Score = 135 bits (336), Expect = 1e-30
Identities = 102/360 (28%), Positives = 179/360 (49%), Gaps = 20/360 (5%)
Query: 75 FTGETLKVPVSMDMLGRIFNGIGKPIDGG--PEIIPEDRRDVHGAPLNPVARAYPRDFIQ 132
+ G+ K+ V +LGR+ +GIG+P++ +P +R ++ P +P+ R
Sbjct: 97 YQGDEFKIRVGDALLGRLVDGIGRPMESNIAAPYLPFER-SLYAEPPDPLLRQVIDQPFI 155
Query: 133 TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYE 192
G+ AIDG+ T GQ++ IF+GSG+ + L I A + +V A +G
Sbjct: 156 LGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGAS------ADIIVLALIGERGR 209
Query: 193 EANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTD 252
E N F ++ + + VL + +D PA+ER+ A T+AEY D VL+++
Sbjct: 210 EVNEFLALLPQS-TLSKCVLVVTTSDRPALERMKAAFTATTIAEYFR-DQGKNVLLMMDS 267
Query: 253 MTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDD 312
+T Y A R++ A E R G+P +++ L + ERAG KGSIT + + + D
Sbjct: 268 VTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGP--APKGSITAIYTVLLESD 325
Query: 313 DITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLA 372
++ PI D I +G IVL+REL + +P ID+ S SR+M + + +H + A
Sbjct: 326 NVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVV-----TSEHLRAA 380
Query: 373 QQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADR-FEREFVAQGYYEDRSIEETLD 431
+ A +++ +L+ +GE + + + +R + F+ Q + S E+T++
Sbjct: 381 AECKKLIATYKNV-ELLIRIGEYTMGQDPEADKAIKNRKLIQNFIQQSTKDISSYEKTIE 439
>gi|11467516 ATP synthase CF1 subunit alpha [Odontella sinensis]
>gi|231593|sp|Q00820|ATPA_ODOSI ATP SYNTHASE ALPHA CHAIN
>gi|7436073|pir||S78321 H+-transporting ATP synthase (EC
3.6.1.34) alpha chain - Odontella sinensis chloroplast
>gi|11944|emb|CAA43157.1| (X60752)
adenosinetriphosphatase [Odontella sinensis]
>gi|11951|emb|CAA43164.1| (X60752)
adenosinetriphosphatase [Odontella sinensis]
>gi|1185211|emb|CAA91694.1| (Z67753) ATP synthase CF1
subunit alpha [Odontella sinensis]
Length = 503
Score = 133 bits (332), Expect = 3e-30
Identities = 123/445 (27%), Positives = 198/445 (43%), Gaps = 23/445 (5%)
Query: 10 TISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAR-ENLAIVQVFEGTRDLDV 68
T+ ++ + V G+ V GE++E E +K G L+ +N+ +V + G + L+
Sbjct: 31 TVLQVGDGIARVYGLDQVMSGELLEFE----DKTIGIALNLENDNVGVVLMGNGRQILEG 86
Query: 69 KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 128
T V+ TG+ ++P LGR+ N +G PIDG +I + R + ++R
Sbjct: 87 ST--VKTTGQIAQIPTGEAFLGRVVNPLGAPIDGKGDIANTETRLLEAMAPGIISRKSVC 144
Query: 129 DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMG 188
+ +QTGI++ID M + RGQ+ I +A K E V+ +G
Sbjct: 145 EPLQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAVDTIINQKT----EDVVCVYVGVG 200
Query: 189 ITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLV 248
EE A+ ++ A+DPA + I P +AEY ++ LV
Sbjct: 201 QKASTVAQVVNVLEEKEAMAYTIIVCASANDPATLQYIAPYAGAALAEYFMYN-GKATLV 259
Query: 249 ILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMPI 306
I D+T A R++S PGR YPG ++ + + ERA ++ GS+T +P+
Sbjct: 260 IYDDLTKQAMAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDALGGGSMTALPV 319
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 366
+ D++ IP IT+GQI LS +L GI P I+V S+SR +G +
Sbjct: 320 IETQASDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAINVGISVSR-----VGSAAQTK 374
Query: 367 DHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSI 426
Q+A +L A+ L + L E +K L R RE + Q S+
Sbjct: 375 AMKQVAGKLKLELAQFAELEAFSQFASD--LDEATQKQLARGTRL-REVLKQPQNSPLSV 431
Query: 427 EETLDLGWE-LLSILPESELKRVKK 450
E + L + + L E E+ VKK
Sbjct: 432 AEQVALIYTGINGFLDELEVASVKK 456
>gb|AAF01629.1| (AF093375) ATP synthase beta subunit [Glaucidium palmatum]
Length = 491
Score = 133 bits (332), Expect = 3e-30
Identities = 120/439 (27%), Positives = 195/439 (44%), Gaps = 43/439 (9%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAR-------ENLAIVQ 58
K I++I GP++ V G + G+ GQ ++ N +
Sbjct: 11 KNLGXIAQIIGPVLDVAFPPG-KMPNIYNALIVKGQDTVGQQINVTCEVQQLLGNNRVRA 69
Query: 59 VFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAP 118
V D ++ V TG L VPV LGRIFN +G+P+D + P D R
Sbjct: 70 VAMSATDGLMRGMEVTDTGAPLSVPVGGATLGRIFNVLGEPVDN---LGPIDXRTT---- 122
Query: 119 LNPVARAYPRDFIQ---------TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIAR 169
+P R+ P DFIQ TGI +D + RG K+ +F G+G+ L ++
Sbjct: 123 -SPXHRSAP-DFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 180
Query: 170 QAKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAI 222
+ + VF +G E N +E+G I + L ++P
Sbjct: 181 N---IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPG 237
Query: 223 ERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYT 282
R+ ALT+AEY + VL+ + ++ + +A E+SA GY + T
Sbjct: 238 ARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRXXSAVGYQPTLST 297
Query: 283 DLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIY 342
++ ++ ER K+GSIT + + +P DD+T P P T VL R L KG Y
Sbjct: 298 EMGSLQERITST--KEGSITSIQAVYVPADDLTDPAPATTFAHLXATTVLXRGLAAKGXY 355
Query: 343 PPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDK 402
P +D L S S +++ I E+H + AQ++ + L+D++A++G + LSE D+
Sbjct: 356 PAVDPLDSTSTMLQPRI----VGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEEDR 411
Query: 403 KYLEFADRFEREFVAQGYY 421
+ A + ER F++Q ++
Sbjct: 412 LTVARARKIER-FLSQPFF 429
>gb|AAG33879.1| (AF232004) HrcN [Pseudomonas syringae pv. tomato]
Length = 419
Score = 133 bits (332), Expect = 3e-30
Identities = 119/420 (28%), Positives = 191/420 (45%), Gaps = 23/420 (5%)
Query: 30 GEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDML 89
G++ E+ G +++ + ++ + V +R G ++ V +L
Sbjct: 16 GDLCEVSKADGSFLLAEIVGFTQECTLLSALGAPDGIQVGAP-IRPLGIAHRIGVDDTLL 74
Query: 90 GRIFNGIGKPIDG---GPEIIPEDRRD---VHGAPLNPVARAYPRDFIQTGISAIDGMNT 143
G + +G G+P+ G G P+DRRD V L P R + TGI AID
Sbjct: 75 GCVLDGFGRPLLGDCLGAFAGPDDRRDTLPVIADALPPTQRPRITRSLPTGIRAIDSAIL 134
Query: 144 LVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEE 203
L GQ++ +F+G+G L A++AR + +VF +G E F +
Sbjct: 135 LGEGQRVGLFAGAGCGKTTLMAELARNM------DCDVIVFGLIGERGRELREFLDHELD 188
Query: 204 TGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREI 263
R+VL +D ++ER A +AE +VL++L +T + A REI
Sbjct: 189 ETLRARSVLVCATSDRSSMERARAAFTATAIAEAFRAR-GQKVLLLLDSLTRFARAQREI 247
Query: 264 SAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTG 323
A E GR G P +YT L + ERAG + GSIT + + + D + P+ D
Sbjct: 248 GIASGEPLGRGGLPPSVYTLLPRLVERAGM--SENGSITALYTVLIEQDSMNDPVADEVR 305
Query: 324 YITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGR 383
+ +G IVLSR+L +G YP IDV S+SR++ + G+ R ++ +QL AAY +
Sbjct: 306 SLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGRDHQRANN--RLRQLLAAYKQVE 363
Query: 384 SLRDLVAV-VGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEETLDLGWELLSILPE 442
L L G + +++ + + + F R Q E ++ETLD + S LPE
Sbjct: 364 MLLRLGEYQAGADPVTDCAVQLNDAINAFLR----QDLREPVPLQETLDGLLRITSQLPE 419
>emb|CAB67128.1| (AJ271079) ATP synthase beta subunit [Oenothera elata subsp.
hookeri]
Length = 498
Score = 133 bits (331), Expect = 5e-30
Identities = 115/434 (26%), Positives = 200/434 (45%), Gaps = 33/434 (7%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVA---YGEVVEIETESGEKRKGQVLDARE---NLAIVQV 59
K+ I++I GP++ V G Y +V ++G + + ++ N + V
Sbjct: 18 KKSGRIAQIIGPVLDVTFPPGKMPNIYNALVVKGRDTGGQEINVTCEVQQLLGNNRVRAV 77
Query: 60 FEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPL 119
D + V TG L VPV LGRIFN +G+ +D E+ P D R +P+
Sbjct: 78 AMSATDGLTRGMEVIDTGAPLSVPVGEATLGRIFNVLGELVD---ELGPVDTRTT--SPI 132
Query: 120 NPVARAYPR-----DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL 174
+ A A+ + +TGI +D + RG K+ +F G+G+ L ++ +
Sbjct: 133 HRSATAFIQLDIELSIFETGIKVVDLLAPNRRGGKIGLFGGAGVGKTVLIMELINN---I 189
Query: 175 GEEESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIIT 227
+ VF +G E N +E+G I + L ++P R+
Sbjct: 190 AKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRV 249
Query: 228 PRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATI 287
A+ VA+Y VL+ + ++ + +A E+SA +P GY + T++ ++
Sbjct: 250 GLTAVRVADYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSL 309
Query: 288 YERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDV 347
ER K GSIT + + +P DD+T P P T + VLSR L KGIYP +D
Sbjct: 310 QERITST--KAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 367
Query: 348 LPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEF 407
L S S +++ I ++H + AQ++ + L+D+++++G + LSE D+ +
Sbjct: 368 LDSTSTMLQPRI----VGDEHYETAQRVKETLQRYKELQDIISILGLDELSEEDRLTVAR 423
Query: 408 ADRFEREFVAQGYY 421
A + ER F++Q ++
Sbjct: 424 ARKIER-FLSQPFF 436
>sp|Q07405|ATPA_MYXXA ATP SYNTHASE ALPHA CHAIN (59 KD MEMBRANE-ASSOCIATED GTP-BINDING
PROTEIN) >gi|286117|dbj|BAA03725.1| (D16176) proton
translocating ATPase [Myxococcus xanthus]
>gi|741014|prf||2006275A 59kD membrane-associated
GTP-binding protein [Myxococcus xanthus]
Length = 515
Score = 132 bits (330), Expect = 6e-30
Identities = 120/430 (27%), Positives = 196/430 (44%), Gaps = 32/430 (7%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAREN---LAIVQVFEGT 63
E T+ + + + G++G GE+VE +G VL+ E+ +AI+ F+
Sbjct: 27 ETGTVLSVGDGIARIYGLEGALAGELVEFANGV----QGLVLNLEEDNVGVAIMGDFQAI 82
Query: 64 RDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDG-GPEIIPEDRRDVHGAPLNPV 122
R+ D +V+ T + VPV ++LGR+ + +GKP+DG GP E RR AP V
Sbjct: 83 REGD----TVKRTQQIASVPVGKELLGRVVDPLGKPLDGKGPIAATETRRLEVKAP-GIV 137
Query: 123 ARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAV 182
+R + +QTGI A+D + + RGQ+ I +A K L +
Sbjct: 138 SRKSVHEPLQTGIKALDALVPVGRGQRELIIGDRQTGKTAVAIDTIINQKGL----NVYC 193
Query: 183 VFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDY 242
++ A+G + GA+E + + A DPA + P + + EY D
Sbjct: 194 IYVAIGQKQSTVAQVVEKLNRYGAMEYTTVVASNASDPAPMQFFAPYAGVAMGEYFR-DN 252
Query: 243 DMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK--GS 300
M L++ D++ A R++S PGR YPG ++ + + ERA ++ ++ GS
Sbjct: 253 KMHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYVHSRLLERAAKLSDEEGAGS 312
Query: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIG 360
+T +PI+ D++ IP IT+GQI L +L G+ P I+V S+SR +G
Sbjct: 313 LTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFFAGVRPAINVGLSVSR-----VG 367
Query: 361 KGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFER--EFVAQ 418
+ Q+A + A+ R L + S+ DK E R R E + Q
Sbjct: 368 SAAQIKAMKQVAGTMKLELAQYRELAAFA-----QFGSDLDKATQETLARGARMVELLKQ 422
Query: 419 GYYEDRSIEE 428
G YE +E+
Sbjct: 423 GQYEPMPVEK 432
>gb|AAA81942.1| (U07346) HrpJ4 [Pseudomonas syringae]
Length = 449
Score = 131 bits (327), Expect = 1e-29
Identities = 117/422 (27%), Positives = 191/422 (44%), Gaps = 27/422 (6%)
Query: 30 GEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDML 89
G++ E+ G +++ + ++ + V +R G ++ V +L
Sbjct: 46 GDLCEVSKADGSLLLAEIVGFTQECTLLSALGPPDGIQVGAP-IRPLGVAHRIGVDDSLL 104
Query: 90 GRIFNGIGKPIDGG-PEIIPEDRRDVHGAP-------LNPVARAYPRDFIQTGISAIDGM 141
G + +G G+P+ G P + RR H + +P +P + TGI AID
Sbjct: 105 GCVLDGFGRPLMGRLPRRVRRPRRPPHDSAGDRRRPAADPATAHHPG--LATGIRAIDSA 162
Query: 142 NTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKSF 201
L GQ++ +F+G+G L A++AR + +VF +G E F
Sbjct: 163 ILLGEGQRVGLFAGAGCGKTTLMAELARNM------DCDVIVFGLIGERGRELREFLDHE 216
Query: 202 EETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALR 261
+ R+VL +D ++ER A +AE +VL++L +T + A R
Sbjct: 217 LDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRAR-GQKVLLLLDSLTRFARAQR 275
Query: 262 EISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDL 321
EI A E GR G P +YT L + ERAG + GSIT + + + D + P+ D
Sbjct: 276 EIGIASGEPLGRGGLPPSVYTLLPRLVERAGM--SENGSITALYTVLIEQDSMNDPVADE 333
Query: 322 TGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAE 381
+ +G IVLSR+L +G YP IDV S+SR++ + G+ R ++ +QL AAY +
Sbjct: 334 VRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGRKHQRANN--RLRQLLAAYKQ 391
Query: 382 GRSLRDLVAV-VGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEETLDLGWELLSIL 440
L L G + +++ + E + F R Q E ++ETLD +L S L
Sbjct: 392 VEMLLRLGEYQAGADPVTDCAVQLNEAINAFLR----QDLREPVPLQETLDRLLQLTSQL 447
Query: 441 PE 442
PE
Sbjct: 448 PE 449
>pir||S23359 H+-transporting ATP synthase (EC 3.6.1.34) alpha chain - Odontella
sinensis chloroplast
Length = 503
Score = 131 bits (325), Expect = 2e-29
Identities = 122/445 (27%), Positives = 197/445 (43%), Gaps = 23/445 (5%)
Query: 10 TISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAR-ENLAIVQVFEGTRDLDV 68
T+ ++ + V G+ V GE++E E +K G L+ +N+ +V + G + L+
Sbjct: 31 TVLQVGDGIARVYGLDQVMSGELLEFE----DKTIGIALNLENDNVGVVLMGNGRQILEG 86
Query: 69 KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 128
T V+ TG+ ++P LGR+ N +G PIDG +I + R + ++R
Sbjct: 87 ST--VKTTGQIAQIPTGEAFLGRVVNPLGAPIDGKGDIANTETRLLEAMAPGIISRKSVC 144
Query: 129 DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMG 188
+ +QTGI++ID M + RGQ+ I +A K E V+ +G
Sbjct: 145 EPLQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAVDTIINQKT----EDVVCVYVGVG 200
Query: 189 ITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLV 248
EE A+ ++ A+DPA + I P +AEY ++ LV
Sbjct: 201 QKASTVAQVVNVLEEKEAMAYTIIVCASANDPATLQYIAPYAGAALAEYFMYN-GKATLV 259
Query: 249 ILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMPI 306
I D+T A R++S PGR YPG ++ + + E A ++ GS+T +P+
Sbjct: 260 IYDDLTKQAMAYRQMSLLLRRPPGREAYPGDVFYLHSRLLEGAAKLSDALGGGSMTALPV 319
Query: 307 LTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTRE 366
+ D++ IP IT+GQI LS +L GI P I+V S+SR +G +
Sbjct: 320 IETQASDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAINVGISVSR-----VGSAAQTK 374
Query: 367 DHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSI 426
Q+A +L A+ L + L E +K L R RE + Q S+
Sbjct: 375 AMKQVAGKLKLELAQFAELEAFSQFASD--LDEATQKQLARGTRL-REVLKQPQNSPLSV 431
Query: 427 EETLDLGWE-LLSILPESELKRVKK 450
E + L + + L E E+ VKK
Sbjct: 432 AEQVALIYTGINGFLDELEVASVKK 456
>pir||D71480 probable flagellum-specific ATP synthase - Chlamydia trachomatis
(serotype D, strain UW3/Cx) >gi|3329173|gb|AAC68312.1|
(AE001342) Flagellum-specific ATP Synthase [Chlamydia
trachomatis]
Length = 434
Score = 131 bits (325), Expect = 2e-29
Identities = 117/438 (26%), Positives = 203/438 (45%), Gaps = 30/438 (6%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRD 65
+E +S+I G L+ +G+ GE+ +I + +V+ ++
Sbjct: 18 RECGILSRISGSLLEAQGLSA-CLGELCQISLSRSDPILAEVIGIHNRTTLLLALTPIYY 76
Query: 66 LDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARA 125
L + V +P+S +LGR+ +G G P+DGGP++ + + +P +P++R
Sbjct: 77 LAIGAEVVPLR-RPASLPLSNHLLGRVLDGFGNPLDGGPQLPKTNLSPLFSSPPSPMSRT 135
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFA 185
++ TGI AID + T+ GQ++ IFS G + L + IA+ G +++ V+ A
Sbjct: 136 PIQEVFPTGIRAIDALLTIGEGQRVGIFSEPGGGKSSLLSTIAK-----GSQQTINVI-A 189
Query: 186 AMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQ 245
+G E + +E A +R V+ + A + A ++I R A+T+AEY D +
Sbjct: 190 LIGERGREVRDYVNQHKEGLAAQRTVIIASTAYETAASKVIAGRAAITIAEYFR-DQGAR 248
Query: 246 VLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMP 305
VL + ++ + E+L+E++ AR E Y ++ +A ERAG KGSIT
Sbjct: 249 VLFTMDSLSRWIESLQEVAIARGETLSTHHYAASVFHHVAEFLERAG--NNDKGSITSFY 306
Query: 306 ILTMPDDDITHP--IPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+ HP D + +G LS + + PPI+VL SLSR +
Sbjct: 307 AIL---HYANHPDIFTDYVKSLLDGHFFLSPQ-EKSFSSPPINVLTSLSRSSRQ-----L 357
Query: 364 TREDHPQLAQQLYA---AYAEGRSLRDLVAVV-GEEALSETDKKYLEFADRFEREFVAQG 419
H AQ+L + AY E + L A V G++A + + L ++F++Q
Sbjct: 358 ALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQDAHLDRAIRLLPSV----KQFLSQP 413
Query: 420 YYEDRSIEETLDLGWELL 437
Y +I ET++ +LL
Sbjct: 414 YSHYSAIHETIEQLCQLL 431
>sp|P52612|FLII_ECOLI FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436098|pir||B64958
H+-transporting ATP synthase (EC 3.6.1.34),
flagellum-specific - Escherichia coli
>gi|1736607|dbj|BAA15766.1| (D90834) Flagellum-specific
ATP synthase (EC 3.6.1.34). [Escherichia coli]
>gi|1788251|gb|AAC75008.1| (AE000286) flagellum-specific
ATP synthase [Escherichia coli K12]
Length = 457
Score = 130 bits (324), Expect = 3e-29
Identities = 111/396 (28%), Positives = 174/396 (43%), Gaps = 24/396 (6%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKR----------KGQVLDARENLA 55
+ Y +++ G ++ G++ + G IE ++G + GQ L
Sbjct: 26 RRYGRLTRATGLVLEATGLQ-LPLGATCVIERQNGSETHEVESEVVGFNGQRLFLMPLEE 84
Query: 56 IVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVH 115
+ V G R + K S ++P+ +LGR+ +G GKP+DG P + +
Sbjct: 85 VEGVLPGAR-VYAKNISAEGLQSGKQLPLGPALLGRVLDGSGKPLDGLPSPDTTETGALI 143
Query: 116 GAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLG 175
P NP+ R + TG+ I+ + T+ RGQ++ +F+GSG+ + L +AR +
Sbjct: 144 TPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTR--- 200
Query: 176 EEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVA 235
+ +V +G E F ++ R+V+ AD + R+ A +A
Sbjct: 201 ---ADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIA 257
Query: 236 EYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIR 295
E D VL+I+ +T Y A REI+ A E P +GYP ++ L + ERAG
Sbjct: 258 EDFR-DRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGI 316
Query: 296 GKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLM 355
GSIT + DD PI D I +G IVLSR L G YP ID+ S+SR M
Sbjct: 317 SGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAM 376
Query: 356 KDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAV 391
I E H + + + RDLV+V
Sbjct: 377 TALIS-----EQHYARVRTFKQLLSSFQRNRDLVSV 407
>gb|AAB51464.1| (U64318) ATP synthase subunit alpha [Moorella thermoacetica]
Length = 507
Score = 130 bits (324), Expect = 3e-29
Identities = 118/453 (26%), Positives = 200/453 (44%), Gaps = 23/453 (5%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDL 66
E T++++ + + G+ GE++E + G VL+ E+ + V G
Sbjct: 27 EVGTVTQVGDGIARIYGLDRAMAGELLEFPGDI----YGMVLNLEED-NVGAVILGPYTH 81
Query: 67 DVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
+ V+ TG ++VPV ++GR+ N +G+PIDG I + R V V R
Sbjct: 82 IKEGDQVKRTGRIVEVPVGEALIGRVVNAMGQPIDGKGPIQTDKFRPVESPAPGVVYRQP 141
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAA 186
+QTG+ AID M + RGQ+ I +A K ++ ++ A
Sbjct: 142 VNTPLQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAIAVDTIINQK----GQNVICIYVA 197
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
+G + EE GA+E ++ + A +PA I P T+ EY ++ V
Sbjct: 198 IGQKASTVAGVVQRLEEAGAMEYIIVVMATASEPAPMLYIAPYAGCTMGEYFMYEQHRDV 257
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQM 304
L + D++ + A RE+S PGR YPG ++ + + ER R+ GS+T +
Sbjct: 258 LCVYDDLSKHAAAYRELSLLLRRPPGREPYPGDVFYLHSGLLERPARLTDSLGGGSLTAL 317
Query: 305 PILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRT 364
P++ D++ IP IT+GQI L +L G P I+V S+SR +G
Sbjct: 318 PVIETQAGDVSAYIPTNVISITDGQIFLESDLFYAGQRPAINVALSVSR-----VGGAAQ 372
Query: 365 REDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDR 424
+ Q+A +L A+ R L A G + L + + L A+R E + Q Y+
Sbjct: 373 IKAMKQVAARLRLDLAQYRELA-AFAQFGSD-LDKATQARLARAERM-MEILKQDQYQPM 429
Query: 425 SIEETLDLGWE----LLSILPESELKRVKKEMI 453
+EE + + + L LP ++ +K+ +
Sbjct: 430 PVEEQVVVLYAAVNGFLDDLPVGRVRAFEKDFL 462
>sp|P41167|ATPA_THIFE ATP SYNTHASE ALPHA CHAIN >gi|154672|gb|AAA53125.1| (M81087)
F1F0-ATPase alpha subunit [Acidithiobacillus
ferrooxidans]
Length = 514
Score = 130 bits (323), Expect = 4e-29
Identities = 98/366 (26%), Positives = 166/366 (44%), Gaps = 29/366 (7%)
Query: 5 SKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAREN---LAIVQVFE 61
++ TI + ++ + G++ V YGE++E+ R G ++ ++ ++ F
Sbjct: 26 TRSQGTIISLSDGILRIHGLEDVMYGEMLELPGG----RFGLAMNLEQDNVGAVVLGEFS 81
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
G ++ DV V+ TG ++VP+ +LGR+ N +G+P+DG I E+ +
Sbjct: 82 GLQEGDV----VKCTGRVMQVPIGKALLGRVVNALGQPVDGKGAIDAEEFDVLEKIAPGV 137
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFA 181
+ R + +QTGI +ID M + RGQ+ I +A K +
Sbjct: 138 IDRQSVDEPMQTGIKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDAILNQK----GKDVQ 193
Query: 182 VVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFD 241
++ A+G + EE GA+E + A + A + + P T+ EY D
Sbjct: 194 CIYVAIGQKASTVAGVVRKLEEYGAMEYTTVIAANASESAAMQYLAPYAGCTMGEYFR-D 252
Query: 242 YDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERA---------- 291
M L++ D+T A R IS PGR YPG ++ + + ERA
Sbjct: 253 RGMNALIVYDDLTKQAWAYRHISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADFVEK 312
Query: 292 ---GRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVL 348
G ++GK GS+T +PI+ D++ +P IT+GQI L +L GI P I+
Sbjct: 313 FTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLETDLFNAGIRPAINAG 372
Query: 349 PSLSRL 354
S+SR+
Sbjct: 373 LSVSRV 378
>pir||A82716 ATP synthase, alpha chain XF1145 [imported] - Xylella fastidiosa
(strain 9a5c) >gi|9106109|gb|AAF83955.1|AE003950_5
(AE003950) ATP synthase, alpha chain [Xylella
fastidiosa]
Length = 515
Score = 129 bits (320), Expect = 9e-29
Identities = 109/435 (25%), Positives = 185/435 (42%), Gaps = 31/435 (7%)
Query: 5 SKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTR 64
S+ T++ + ++ + G+ GE++E+ ++ D+ ++ +E R
Sbjct: 27 SRNEGTVTSVSDGIVRIFGLADAMQGEMIELPNKTYALALNLERDS-VGAVVLGDYEHLR 85
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
+ D+ T TG L+VPV +LGR+ N +G+PIDG + P V + R
Sbjct: 86 EGDIAKT----TGRILEVPVGKSLLGRVVNALGEPIDGKGALGPTQTAPVERVAPGVIWR 141
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVF 184
+QTG ++D M + RGQ+ I +A K G V+
Sbjct: 142 KSVNQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGKTAMAIDTVISQKDTG----IKCVY 197
Query: 185 AAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDM 244
A+G + EE A++ ++ A + A + I+ T+ EY D
Sbjct: 198 VAIGQKASTIANIVRKLEENDALDHTIVVAATASESAALQYISAYAGCTMGEYF-MDRGE 256
Query: 245 QVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERA------------- 291
L+I D++ A R+IS + PGR YPG ++ + + ERA
Sbjct: 257 DALIIYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAARVSEEYVEKFTQ 316
Query: 292 GRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSL 351
G ++GK GS+T +PI+ D++ +P IT+GQI L +L GI P ++ S+
Sbjct: 317 GEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAVNAGISV 376
Query: 352 SRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRF 411
SR +G + +L+ + + A+ R L + L ET +K LE R
Sbjct: 377 SR-----VGGSAQTKIIKKLSGGIRISLAQYRELAAFAQFASD--LDETTRKQLERGQRV 429
Query: 412 EREFVAQGYYEDRSI 426
E + Q Y S+
Sbjct: 430 -TELMKQKQYTSMSV 443
>sp|P05036|ATPA_RHORU ATP SYNTHASE ALPHA CHAIN >gi|67815|pir||PWQFA H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - Rhodospirillum
rubrum >gi|46366|emb|CAA26338.1| (X02499) ATP synthetase
alpha [Rhodospirillum rubrum]
Length = 510
Score = 128 bits (318), Expect = 2e-28
Identities = 110/434 (25%), Positives = 190/434 (43%), Gaps = 27/434 (6%)
Query: 5 SKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVF---E 61
S E + + + V G+ V GE+VE KG L+ + + +F
Sbjct: 25 SAEVGQVLSVGDGIARVYGLDNVQAGEMVEFANGV----KGMALNLESDNVGIVIFGEDR 80
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP 121
G ++ DV V+ T + VPV +LGR+ +G+G PIDG +++ +R+
Sbjct: 81 GIKEGDV----VKRTQTIVDVPVGKGLLGRVVDGLGNPIDGKGDLVDVERKRAEVKAPGI 136
Query: 122 VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSG-----SGLPHNQLAAQIARQAKVLGE 176
+ R + +QTGI AID + + RGQ+ I + + + + Q A K +
Sbjct: 137 IPRKSVHEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAVILDTILNQKAVNDKAKDD 196
Query: 177 EESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAE 236
E V+ A+G K + GA++ ++ A +PA + + P T+ E
Sbjct: 197 SEKLFCVYVAVGQKRSTVAQVVKVLADHGALDYTIVVAATASEPAPLQFLAPYTGCTMGE 256
Query: 237 YLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRG 296
+ D M ++ D+T A R++S PGR +PG ++ + + ERA ++
Sbjct: 257 FFR-DNGMHAVIFYDDLTKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKLND 315
Query: 297 KK--GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354
GS+T +P++ +D++ IP IT+GQI L +L KGI P ++V S+SR
Sbjct: 316 DNGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFFKGIRPAVNVGLSVSR- 374
Query: 355 MKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFERE 414
+G + Q+A + A+ R + + L +K L R E
Sbjct: 375 ----VGSSAQIKAMKQVAGSIKLELAQYREMAAFAQFASD--LDPATQKLLARGARL-TE 427
Query: 415 FVAQGYYEDRSIEE 428
+ Q Y ++EE
Sbjct: 428 LLKQAQYSPLAVEE 441
>sp|P17674|ATPA_BACME ATP SYNTHASE ALPHA CHAIN >gi|98135|pir||F31482 H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - Bacillus megaterium
>gi|142559|gb|AAA82524.1| (M20255) ATP synthase alpha
subunit [Bacillus megaterium]
Length = 502
Score = 127 bits (316), Expect = 3e-28
Identities = 115/454 (25%), Positives = 198/454 (43%), Gaps = 26/454 (5%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARE-NLAIVQVFEGTRD 65
+ T+ ++ + G+ V GE+VE +G Q L+ + I+ + R+
Sbjct: 27 DVGTVIQVGDGIARAHGLDNVMAGELVEFS--NGVMGMAQNLEENNVGIIILGPYTEIRE 84
Query: 66 LDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARA 125
D VR TG ++VPV ++GR+ N +G+P+DG + R + GA + R
Sbjct: 85 GD----EVRRTGRIMEVPVGEQLIGRVVNSLGQPVDGLGPVETTKTRPIEGAAPGVMDRK 140
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFA 185
+ +QTGI AID + + RGQ+ I +A K ++ ++
Sbjct: 141 SVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTILNQK----DQDMVCIYV 196
Query: 186 AMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQ 245
A+G ++ + GA++ ++ A PA + P +T+ E ++
Sbjct: 197 AIGQKESTVRNVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVTMGEEFMYN-GKH 255
Query: 246 VLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK--GSITQ 303
VLVI D+T A RE+S PGR YPG ++ + + ERA ++ K GS+T
Sbjct: 256 VLVIYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDAKGGGSLTA 315
Query: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+P + D++ IP IT+GQI L +L G+ P I+ S+SR +G
Sbjct: 316 LPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSR-----VGGSA 370
Query: 364 TREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYED 423
+ ++A L A R L A G + T K A E + QG ++
Sbjct: 371 QIKAMKKVAGTLRLDLASYRELESF-AQFGSDLDQATQAKLNRGARTV--EILKQGLHKP 427
Query: 424 RSIEETLDLGWEL----LSILPESELKRVKKEMI 453
+E+ + + + L L +P S++ R + E +
Sbjct: 428 LRVEKQVAVLYALTKGFLDDVPVSDITRFEDEYL 461
>sp|O66907|ATPA_AQUAE ATP SYNTHASE ALPHA CHAIN >gi|7436078|pir||G70359 ATP synthase F1
alpha subunit - Aquifex aeolicus
>gi|2983261|gb|AAC06855.1| (AE000701) ATP synthase F1
alpha subunit [Aquifex aeolicus]
Length = 503
Score = 127 bits (316), Expect = 3e-28
Identities = 111/389 (28%), Positives = 175/389 (44%), Gaps = 25/389 (6%)
Query: 73 VRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQ 132
V+ TG L PV ++GR+ + +G P+DG I E R V V R + +Q
Sbjct: 89 VKRTGRILDAPVGEGLVGRVIDPLGNPLDGKGPIQFEYRSPVEKIAPGVVKRKPVHEPLQ 148
Query: 133 TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEES-FAVVFAAMGITY 191
TGI AID M + RGQ+ I +A +L ++ S ++ A+G
Sbjct: 149 TGIKAIDAMIPIGRGQRELIIGDRATGKTTVAID-----TILAQKNSDVYCIYVAVGQKR 203
Query: 192 EEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILT 251
+ E GA+E + + A DPA + + P + T+ EY D L+I
Sbjct: 204 AAIARLIELLEREGAMEYTTVVVASASDPASLQYLAPFVGCTIGEYFR-DNGKHALIIYD 262
Query: 252 DMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMPILTM 309
D++ + EA R++S PGR YPG ++ + + ERA ++ GS+T +PI+
Sbjct: 263 DLSKHAEAYRQLSLLMRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGAGSLTALPIIET 322
Query: 310 PDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHP 369
D+ IP IT+GQI L +L KGI P I+V S+SR +G +
Sbjct: 323 KAGDVAAYIPTNVISITDGQIYLEADLFNKGIRPAINVGLSVSR-----VGGAAQIKAMK 377
Query: 370 QLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFER--EFVAQGYYEDRSIE 427
Q+A L A+ R L V + SE DK + +R R E + Q Y +E
Sbjct: 378 QVAGTLRLELAQFRELEAFV-----QFASELDKATQQQINRGLRLVELLKQEPYNPIPVE 432
Query: 428 ETLDLGWE----LLSILPESELKRVKKEM 452
+ + L + L +P +++ +KE+
Sbjct: 433 KQIVLIYAGTHGYLDDIPVESVRKFEKEL 461
>gb|AAA82637.1| (L49147) ATPase [Escherichia coli]
Length = 457
Score = 126 bits (314), Expect = 4e-28
Identities = 110/396 (27%), Positives = 171/396 (42%), Gaps = 24/396 (6%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKR----------KGQVLDARENLA 55
+ Y +++ G ++ G++ + G IE ++G + GQ L
Sbjct: 26 RRYGRLTRATGLVLEATGLQ-LPLGATCVIERQNGSETHEVESEVVGFNGQRLFLMPLEE 84
Query: 56 IVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVH 115
+ V G R + K S ++P +LGR+ +G GKP+DG P + +
Sbjct: 85 VEGVLPGAR-VYAKNISAEGLQSGKQLPSVPALLGRVLDGSGKPLDGLPSPDTTETGALI 143
Query: 116 GAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLG 175
P NP+ R + TG+ I+ + T+ RGQ++ +F+GS + + L +AR +
Sbjct: 144 TPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSAVGKSVLLGMMARYTR--- 200
Query: 176 EEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVA 235
+ +V +G E F ++ R+V+ D + R+ P A +A
Sbjct: 201 ---ADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPRDVSPLLRMRMPAYATRIA 257
Query: 236 EYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIR 295
E D VL+I+ +T Y A REI+ A E P +GYP ++ L + ERAG
Sbjct: 258 EDFR-DRGQHVLLIMDSLTRYGMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGI 316
Query: 296 GKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLM 355
GSIT + DD PI D I +G IVLSR L G YP ID+ S+SR M
Sbjct: 317 SGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAM 376
Query: 356 KDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAV 391
I E H + + RDLV+V
Sbjct: 377 TALIS-----EQHYARVRTFKQLLSSFHGNRDLVSV 407
>dbj|BAB07475.1| (AP001519) ATP synthase alpha subunit [Bacillus halodurans]
Length = 502
Score = 126 bits (314), Expect = 4e-28
Identities = 113/456 (24%), Positives = 206/456 (44%), Gaps = 30/456 (6%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARE-NLAIVQVFEGTR 64
++ T+ ++ + + G++ V GE++E +G Q L+ + I+ + R
Sbjct: 26 QDVGTVIRVGDGIALAHGLESVMAGELLEFS--NGVMGMAQNLEENNVGIIILGPYSEIR 83
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
+ D V+ TG ++VPV ++LGR+ N +G+PIDG I R + + R
Sbjct: 84 EGD----EVKRTGRIMEVPVGEELLGRVVNPLGQPIDGRGPIETSKTRPIESPAPGVMDR 139
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVF 184
+ +QTGI +ID M + RGQ+ I +A K ++ ++
Sbjct: 140 KSVHEPLQTGIKSIDSMIPVGRGQRELIIGDRQTGKTSIAIDTIINQK----DQDMICIY 195
Query: 185 AAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDM 244
A+G ++ + GA++ ++ A +PA + P +++ E ++
Sbjct: 196 VAIGQKESTVAGVVETLRQHGALDYTIVVSASASEPAPLLFLAPYAGVSMGEEFMYN-GK 254
Query: 245 QVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK--GSIT 302
VLV+ D+T A RE+S PGR YPG ++ + + ERA ++ K GSIT
Sbjct: 255 HVLVVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDAKGGGSIT 314
Query: 303 QMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKG 362
+P + D++ IP IT+GQI L +L G+ P ++ S+SR+ G +
Sbjct: 315 ALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFYSGVRPAVNAGLSVSRV--GGSAQI 372
Query: 363 RTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFER--EFVAQGY 420
+ + + AAY E + A G S+ DK +R +R E + QG
Sbjct: 373 KAMKKVSGTLRLDLAAYRE----LEAFAQFG----SDLDKATQAKLNRGQRTVEVLKQGL 424
Query: 421 YEDRSIEETLDLGWEL----LSILPESELKRVKKEM 452
+E +E+ + + + L L +P +++R + E+
Sbjct: 425 HEPLPVEKQVAIIYALINGFLDDIPVGDVRRFESEL 460
>pir||S62702 H+-transporting ATP synthase (EC 3.6.1.34) alpha chain - Platymonas
subcordiformis mitochondrion >gi|633585|emb|CAA87749.1|
(Z47795) ATPase alpha subunit [Platymonas
subcordiformis]
Length = 469
Score = 126 bits (313), Expect = 6e-28
Identities = 101/355 (28%), Positives = 165/355 (46%), Gaps = 12/355 (3%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRD 65
+E + I + V G+ + GE+VE ++ KG L+ + V VF
Sbjct: 28 EEVGKVLSIGDGIARVYGLNKIQAGEMVEFQSGI----KGMALNLENDNVGVVVFGSDTS 83
Query: 66 LDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARA 125
++ + V+ T + VPV LGR+ + +G PIDG + R+ V ++R
Sbjct: 84 IN-EGDIVKRTNTIVDVPVGKGTLGRVMDALGNPIDGKGPLTNVTRQRVEVKAPGIISRK 142
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQ--IARQAKVLGEEES--FA 181
+ +QTGI A+D + + RGQ+ I ++A I +Q G +ES
Sbjct: 143 SVHEPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTRIAIDTIINQQGVNEGTDESKKLY 202
Query: 182 VVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFD 241
V+ A+G K EE GA++ +++ A DPA + + P + EY D
Sbjct: 203 CVYVAVGQKRSTVAQLVKILEERGALKYSIIVAATASDPAPLQFLAPYSGCAMGEYFR-D 261
Query: 242 YDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KG 299
M L+I D++ A R++S PGR +PG ++ + + ERA ++ G
Sbjct: 262 NGMHALIIYDDVSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKMSDDTGAG 321
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354
S+T +P++ D++ IP IT+GQI L EL KGI P I+V S+SR+
Sbjct: 322 SLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRV 376
>sp|Q10592|ATPA_MYCTU ATP SYNTHASE ALPHA CHAIN >gi|7436079|pir||H70774 probable atpA
protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1322432|emb|CAA97741.1| (Z73419) atpA [Mycobacterium
tuberculosis]
Length = 549
Score = 126 bits (313), Expect = 6e-28
Identities = 120/449 (26%), Positives = 203/449 (44%), Gaps = 25/449 (5%)
Query: 20 IVEGVKGVAYGE-VVEIETESGEKRKGQVLDARENL---AIVQVFEGTRDLDVKTTSVRF 75
+V+ G+A+ E + + T+ + G +L NL ++ V G + + V+
Sbjct: 34 VVDAGDGIAHVEGLPSVMTQELLEFPGGILGVALNLDEHSVGAVILGDFENIEEGQQVKR 93
Query: 76 TGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGI 135
TGE L VPV LGR+ N +G+PIDG ++ + RR + + V R ++ +QTGI
Sbjct: 94 TGEVLSVPVGDGFLGRVVNPLGQPIDGRGDVDSDTRRALELQAPSVVHRQGVKEPLQTGI 153
Query: 136 SAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQI---ARQAKVLGE-EESFAVVFAAMGITY 191
AID M + RGQ+ I + RQ G+ ++ V+ A+G
Sbjct: 154 KAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWESGDPKKQVRCVYVAIGQKG 213
Query: 192 EEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILT 251
+++ EE GA++ + A + A + + P +A++ ++ VL+I
Sbjct: 214 TTIAAVRRTLEEGGAMDYTTIVAAAASESAGFKWLAPYTGSAIAQHWMYE-GKHVLIIFD 272
Query: 252 DMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMPILTM 309
D+T EA R IS PGR YPG ++ + + ER ++ GS+T +PI+
Sbjct: 273 DLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDDLGGGSLTGLPIIET 332
Query: 310 PDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHP 369
+DI+ IP IT+GQ L +L +G+ P I+V S+SR +G +
Sbjct: 333 KANDISAYIPTNVISITDGQCFLETDLFNQGVRPAINVGVSVSR-----VGGAAQIKAMK 387
Query: 370 QLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEET 429
++A L ++ R L A + L K LE R E + Q + +EE
Sbjct: 388 EVAGSLRLDLSQYRELEAFAAFASD--LDAASKAQLERGARLV-ELLKQPQSQPMPVEEQ 444
Query: 430 -----LDLGWELLSILPESELKRVKKEMI 453
L G L S+ P +++R + E++
Sbjct: 445 VVSIFLGTGGHLDSV-PVEDVRRFETELL 472
>sp|P26526|ATPA_CHLRE ATP SYNTHASE ALPHA CHAIN
Length = 508
Score = 125 bits (310), Expect = 1e-27
Identities = 108/424 (25%), Positives = 191/424 (44%), Gaps = 20/424 (4%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDL 66
++ + ++ + + G++ GE++E E G L+A N+ V + +G +
Sbjct: 28 DFGIVFQVGDGIARIYGLEKAMSGELLEFE--DGTLGIALNLEAN-NVGAVLLGDGLKIT 84
Query: 67 DVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAY 126
+ + VR TG+ ++PV LGR+ +G+ +P+DG + +D R + VAR
Sbjct: 85 E--GSRVRCTGKIAEIPVGEAYLGRVVDGLARPVDGKGAVQTKDSRAIESPAPGIVARRS 142
Query: 127 PRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAA 186
+ + TG+ A+D M + RGQ+ I +A K G V+ A
Sbjct: 143 VYEPLATGLVAVDAMIPVGRGQRELIIGDRQTGKTAIAVDTILNQKGKG----VICVYVA 198
Query: 187 MGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQV 246
+G + +E GA++ ++ + A++PA + + P T+AEY +
Sbjct: 199 IGQKASSVAQVLNTLKERGALDYTIIVMANANEPATLQYLAPYTGATLAEYFMYT-GRPT 257
Query: 247 LVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQM 304
L I D++ +A RE+S PGR YPG ++ + + ERA ++ +GS+T +
Sbjct: 258 LTIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNNALGEGSMTAL 317
Query: 305 PILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRT 364
PI+ + D++ IP IT+GQI L+ L G+ P I+V S+SR +G
Sbjct: 318 PIVETQEGDVSAYIPTNVISITDGQIFLAAGLFNSGLRPAINVGISVSR-----VGSAAQ 372
Query: 365 REDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDR 424
+ Q+A +L A+ L + L + + L R RE + Q
Sbjct: 373 PKAMKQVAGKLKLELAQFAELEAFSQFASD--LDQATQNQLARGARL-REILKQPQSSPL 429
Query: 425 SIEE 428
S+EE
Sbjct: 430 SVEE 433
>gi|11466531 ATP synthase F1 subunit alpha [Reclinomonas americana]
>gi|7436077|pir||S78162 H+-transporting ATP synthase (EC
3.6.1.34) alpha chain - Reclinomonas americana (ATCC
50394) mitochondrion >gi|2258361|gb|AAD11895.1|
(AF007261) ATP synthase F1 subunit alpha [Reclinomonas
americana]
Length = 512
Score = 124 bits (309), Expect = 2e-27
Identities = 97/356 (27%), Positives = 160/356 (44%), Gaps = 12/356 (3%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRD 65
+E + I + V G+ V GE+VE KG L+ + + +F R
Sbjct: 26 EEIGRVISIGDGIARVYGLNNVQAGEMVEFPKAG---IKGMALNLETDNVGIVLFGNDRA 82
Query: 66 LDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARA 125
+ + VR TG + VPV +LGR+ + +G PIDG I +RR V ++R
Sbjct: 83 I-AEGDIVRRTGAIVDVPVGKGLLGRVVDALGNPIDGKGPIQTTERRRVEVKAPGILSRK 141
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLG-----EEESF 180
+ + TGI AID + + RGQ+ I +A K++ E E
Sbjct: 142 SVHEPMSTGIKAIDCLVPIGRGQRELIIGDRQTGKTAIALDTMLNQKLINESTQKESEKL 201
Query: 181 AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
++ A+G ++ EE A++ ++ + A +PA + + P + E+
Sbjct: 202 YSIYVAIGQKRSTVAQLVQTLEEYDALKYTIIVASTASEPAPLQFLAPYSGCAIGEFFR- 260
Query: 241 DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--K 298
D M L+I D++ A R+ S PGR YPG ++ + + ERA ++ K
Sbjct: 261 DNGMHGLIIYDDLSKQAVAYRQTSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKDGA 320
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354
GS+T +P++ D++ IP IT+GQI L EL G+ P + V S+SR+
Sbjct: 321 GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYSGLRPAVSVGLSVSRV 376
>pir||E82952 ATP synthase alpha chain PA5556 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9951896|gb|AAG08941.1|AE004967_12
(AE004967) ATP synthase alpha chain [Pseudomonas
aeruginosa]
Length = 514
Score = 124 bits (308), Expect = 2e-27
Identities = 110/437 (25%), Positives = 184/437 (41%), Gaps = 31/437 (7%)
Query: 5 SKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTR 64
++ TI + ++ + G+ V YGE++E G L+ ++ ++ V G
Sbjct: 26 ARNEGTIVSVSDGIVRIYGLADVMYGEMIEFPGGV----YGMALNLEQD-SVGAVVLGEY 80
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
+ + + TG L+VPV ++LGR+ + +G PIDG I + V + R
Sbjct: 81 QGLAEGMNAKCTGRILEVPVGPELLGRVVDALGNPIDGKGPIDAKATDAVEKVAPGVIWR 140
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVF 184
+QTG ++D M + RGQ+ I + LA A + ++ V+
Sbjct: 141 KSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKTALAVD----AIINQKDSGIKCVY 196
Query: 185 AAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDM 244
A+G + EE GA+ ++ A + A + + P T+ EY D
Sbjct: 197 VAIGQKQSTIANVVRKLEENGALANTIVVAASASESAALQYLAPYSGCTMGEYFR-DRGE 255
Query: 245 QVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIR--------- 295
L++ D++ A R+IS PGR YPG ++ + + ERA R+
Sbjct: 256 DALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSEEYVEKFTN 315
Query: 296 ----GKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSL 351
GK GS+T +PI+ D++ +P IT+GQI L + GI P ++ S+
Sbjct: 316 GAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESAMFNSGIRPAVNAGISV 375
Query: 352 SRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRF 411
SR +G + +L+ + A A+ R L + L E +K LE R
Sbjct: 376 SR-----VGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASD--LDEATRKQLEHGQRV 428
Query: 412 EREFVAQGYYEDRSIEE 428
E + Q Y SI E
Sbjct: 429 -TELMKQKQYAPMSIAE 444
>sp|P13356|ATPB_BACFR ATP SYNTHASE BETA CHAIN >gi|476889|pir||A46570 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Bacteroides fragilis
>gi|143924|gb|AAA22901.1| (M22247) ATP-synthetase
beta-subunit [Bacteroides fragilis]
Length = 505
Score = 123 bits (305), Expect = 5e-27
Identities = 114/455 (25%), Positives = 199/455 (43%), Gaps = 49/455 (10%)
Query: 4 MSKEYSTISKIYGPLMIV--EGVKG----VAYGEVVEIETESGEKRKGQVLD-ARENLAI 56
MS+ IS++ GP++ V EG + + + +EI+ +G+K +V EN
Sbjct: 1 MSQIIGHISQVIGPVVDVYFEGTESDLILPSIHDALEIKRHNGKKLIVEVQQHIGENTVR 60
Query: 57 VQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHG 116
+ T L + V T + +PV + GR+ N +G IDG E+ + +H
Sbjct: 61 TVAMDSTDGLQ-RGMKVFPTEGPITMPVGEQIKGRLMNVVGDSIDGMKELNRDGAYSIHR 119
Query: 117 APLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE 176
P ++ + TGI ID + +G K+ +F G+G+ L ++ + +
Sbjct: 120 DPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGGKIGLFGGAGVGKTVLIMELINN---IAK 176
Query: 177 EESFAVVFAAMGITYEEANFFKKSFEETGAIE---------------------------R 209
+ + VFA +G E N + E+G I +
Sbjct: 177 KHNGFSVFAGVGERTREGNDLLREMIESGVIRYGEAFKESMEKGHWDLSKVDYNEVEKSQ 236
Query: 210 AVLFLNLADDPAIERIITPRMALTVAEYL----AFDYDMQVLVILTDMTNYCEALREISA 265
A L ++P R LTVAE A +L + ++ + +A E+SA
Sbjct: 237 ATLVFGQMNEPPGARASVALSGLTVAESFRDMGAKSGARDILFFIDNIFRFTQAGSEVSA 296
Query: 266 AREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYI 325
+P GY + T++ + ER K GSIT + + +P DD+T P P T
Sbjct: 297 LLGRMPSAVGYQPTLATEMGAMQERITST--KTGSITSVQAVYVPADDLTDPAPATTFTH 354
Query: 326 TEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSL 385
+ VLSR++ GIYP +D L S SR++ I ++H +AQ++ + L
Sbjct: 355 LDATTVLSRKITELGIYPAVDPLESTSRILDPHI----VGQEHYDVAQRVKQILQRNKEL 410
Query: 386 RDLVAVVGEEALSETDKKYLEFADRFEREFVAQGY 420
+D+++++G E LS+ D+ + A R +R F++Q +
Sbjct: 411 QDIISILGMEELSDADRLVVNRARRVQR-FLSQPF 444
>pir||S39254 H+-transporting ATP synthase (EC 3.6.1.34) alpha chain - Bacillus
subtilis
Length = 502
Score = 123 bits (305), Expect = 5e-27
Identities = 95/352 (26%), Positives = 163/352 (45%), Gaps = 14/352 (3%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLD-ARENLAIVQVFEGTR 64
++ T+ ++ + V G+ GE+VE +G Q L+ + + I+ F R
Sbjct: 26 QDVGTVIQVGDGIARVHGLDNCMAGELVEFS--NGVLGMAQNLEESNVGIVILGPFSEIR 83
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
+ D V+ TG ++VPV +++GRI N +G+P+DG I+ R + + R
Sbjct: 84 EGD----EVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGPILTSKTRPIESPAPGVMDR 139
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVF 184
+ +QTGI AID + + RGQ+ I +A K ++ V+
Sbjct: 140 KSVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTSVAIDAILNQK----DQDMICVY 195
Query: 185 AAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDM 244
A+G ++ + GA++ ++ A PA + P +T+AE ++
Sbjct: 196 VAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVTMAEEFMYN-GK 254
Query: 245 QVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK--GSIT 302
VLV+ D++ A RE+S PGR +PG ++ + + ERA ++ K GSIT
Sbjct: 255 HVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSDAKGAGSIT 314
Query: 303 QMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354
+P + DI+ IP IT+GQI L +L G+ P I+ S+SR+
Sbjct: 315 ALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRV 366
>sp|P37808|ATPA_BACSU ATP SYNTHASE ALPHA CHAIN (VEGETATIVE PROTEIN 100) (VEG100)
>gi|2118186|pir||I40366 H+-transporting ATP synthase (EC
3.6.1.34) alpha chain - Bacillus subtilis
>gi|580831|emb|CAA82258.1| (Z28592) ATP synthase subunit
alpha [Bacillus subtilis] >gi|2636208|emb|CAB15700.1|
(Z99122) ATP synthase (subunit alpha) [Bacillus
subtilis]
Length = 502
Score = 123 bits (305), Expect = 5e-27
Identities = 95/352 (26%), Positives = 163/352 (45%), Gaps = 14/352 (3%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLD-ARENLAIVQVFEGTR 64
++ T+ ++ + V G+ GE+VE +G Q L+ + + I+ F R
Sbjct: 26 QDVGTVIQVGDGIARVHGLDNCMAGELVEFS--NGVLGMAQNLEESNVGIVILGPFSEIR 83
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
+ D V+ TG ++VPV +++GRI N +G+P+DG I+ R + + R
Sbjct: 84 EGD----EVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGPILTSKTRPIESPAPGVMDR 139
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVF 184
+ +QTGI AID + + RGQ+ I +A K ++ V+
Sbjct: 140 KSVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTSVAIDAILNQK----DQDMICVY 195
Query: 185 AAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDM 244
A+G ++ + GA++ ++ A PA + P +T+AE ++
Sbjct: 196 VAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVTMAEEFMYN-GK 254
Query: 245 QVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK--GSIT 302
VLV+ D++ A RE+S PGR +PG ++ + + ERA ++ K GSIT
Sbjct: 255 HVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSDAKGAGSIT 314
Query: 303 QMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354
+P + DI+ IP IT+GQI L +L G+ P I+ S+SR+
Sbjct: 315 ALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRV 366
>pir||F72231 ATP synthase F1, subunit alpha - Thermotoga maritima (strain MSB8)
>gi|4982184|gb|AAD36679.1|AE001805_4 (AE001805) ATP
synthase F1, subunit alpha [Thermotoga maritima]
Length = 503
Score = 123 bits (305), Expect = 5e-27
Identities = 121/445 (27%), Positives = 192/445 (42%), Gaps = 23/445 (5%)
Query: 23 GVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETLKV 82
G+ V E+VE E+G K G + E+ + + +D+ T VR ++V
Sbjct: 43 GLNKVMVSELVEF-VETGVK--GVAFNLEEDNVGIIILGEYKDIKEGHT-VRRLKRIIEV 98
Query: 83 PVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMN 142
PV ++LGR+ N +G+P+DG I ++ R + + R +QTGI AID M
Sbjct: 99 PVGEELLGRVVNPLGEPLDGKGPINAKNFRPIEIKAPGVIYRKPVDTPLQTGIKAIDSMI 158
Query: 143 TLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYEEANFFKKSFE 202
+ RGQ+ I +A K G ++ A+G
Sbjct: 159 PIGRGQRELIIGDRQTGKTAIAIDTIINQKGQG----VYCIYVAIGQKKSAIARIIDKLR 214
Query: 203 ETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALRE 262
+ GA+E + + A DPA + I P + EY A+ LV+ D++ + A R+
Sbjct: 215 QYGAMEYTTVVVASASDPASLQYIAPYAGCAMGEYFAYS-GRDALVVYDDLSKHAVAYRQ 273
Query: 263 ISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMPILTMPDDDITHPIPD 320
+S PGR YPG ++ + + ERA R+ K GS+T +PI+ +DI+ IP
Sbjct: 274 LSLLMRRPPGREAYPGDIFYLHSRLLERAVRLNDKLGGGSLTALPIVETQANDISAYIPT 333
Query: 321 LTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYA 380
IT+GQI L L G P I+V S+SR +G + Q+A L A
Sbjct: 334 NVISITDGQIYLEPGLFYAGQRPAINVGLSVSR-----VGGSAQIKAMKQVAGMLRIDLA 388
Query: 381 EGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEETLDLGWE----L 436
+ R L E L + + R E + Q Y +EE + + +
Sbjct: 389 QYRELETFAQFATE--LDPATRAQIIRGQRL-MELLKQEQYSPMPVEEQVVVLFAGVRGY 445
Query: 437 LSILPESELKRVKKEMIMKYHPKYR 461
L LP E++R +KE + H K++
Sbjct: 446 LDDLPVEEVRRFEKEFLRFMHEKHQ 470
>pir||D81743 virulence ATPase, probable TC0090 [imported] - Chlamydia muridarum
(strain Nigg) >gi|7190124|gb|AAF38970.1| (AE002276)
virulence ATPase, putative [Chlamydia muridarum]
Length = 434
Score = 122 bits (303), Expect = 9e-27
Identities = 112/432 (25%), Positives = 194/432 (43%), Gaps = 30/432 (6%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRD 65
+E +S+I G L+ +G+ GE+ +I +V+ ++
Sbjct: 18 RECGILSRISGDLLEAQGLSA-CLGELCQISLPRSSPILAEVIGIHNQTTLLLALTPIYS 76
Query: 66 LDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARA 125
L + V +P+S +LGR+ +G G P+DG P + + P +P++R
Sbjct: 77 LSLGAEVVPLR-RPASLPLSHHLLGRVIDGFGNPLDGNPPLPKSHLSPLFSPPPSPMSRT 135
Query: 126 YPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFA 185
++ TGI AID + T+ GQ++ IFS G + L + IA+ G +++ V+ A
Sbjct: 136 PIQEIFPTGIRAIDALLTIGEGQRVGIFSEPGGGKSSLLSTIAK-----GSQQTINVI-A 189
Query: 186 AMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQ 245
+G E + +E A +R ++ ++ A + A ++I R A+T+AEY D +
Sbjct: 190 LIGERGREVRDYVNQHKEGLAAQRTIIVVSTAHETAASKVIAGRAAITIAEYFR-DQGAR 248
Query: 246 VLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMP 305
VL I+ ++ + E+L+E++ AR E Y ++ ++ ERAG KGSIT
Sbjct: 249 VLFIMDSLSRWIESLQEVALARGETLSTHHYAASVFHHVSEFLERAG--NNDKGSITSFY 306
Query: 306 ILTMPDDDITHP--IPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGR 363
+ HP D + +G LS + + PPI++L SLSR
Sbjct: 307 AML---HYANHPDIFNDYVKSLLDGHFFLS-PVEKSFFSPPINLLTSLSRSACQ-----L 357
Query: 364 TREDHPQLAQQLYA---AYAEGRSLRDLVAVV-GEEALSETDKKYLEFADRFEREFVAQG 419
H AQ+L + AY E + L A V G++A + + L REF++Q
Sbjct: 358 ALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQDAKLDRAIRLLPSL----REFLSQP 413
Query: 420 YYEDRSIEETLD 431
I +T++
Sbjct: 414 LSNYSDIHDTIE 425
>sp|P50001|ATPA_STRLI ATP SYNTHASE ALPHA CHAIN >gi|480957|pir||S37545 H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - Streptomyces
lividans >gi|405799|emb|CAA80325.1| (Z22606)
H(+)-transporting ATP synthase [Streptomyces lividans]
Length = 529
Score = 122 bits (302), Expect = 1e-26
Identities = 116/463 (25%), Positives = 198/463 (42%), Gaps = 26/463 (5%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARE-NLAIVQVFEGTR 64
+E T++ + VEG+ E+++ E G L+ RE ++ F G
Sbjct: 30 EEVGTVTLAGDGIAKVEGLPSAMANELLKFE--DGTLGLALNLEEREIGCVVLGEFSGIE 87
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
+ V TGE L V V+ LGR+ + +G PIDG EI RR + + R
Sbjct: 88 E----GQPVSRTGEVLSVAVAEGYLGRVVDPLGNPIDGLGEIETSGRRALELQAPTVMQR 143
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQ-IARQA---KVLGEEESF 180
+ ++TG A+D M + RGQ+ I LA I Q + +
Sbjct: 144 KSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTIINQRDNWRTGDPNKQV 203
Query: 181 AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
++ A+G + + EE GA+E + A DPA + + P + + +
Sbjct: 204 RCIYVAIGQKGSTIASVRGALEENGALEYTTIVAAPASDPAGFKYLAPYTGSAIGQQWMY 263
Query: 241 DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK-- 298
+ VL+I D++ +A R +S PGR YPG ++ + + ER ++ +
Sbjct: 264 E-GKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDAEGA 322
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GS+T +PI+ +D++ IP IT+GQ L +L G P ++V S+SR
Sbjct: 323 GSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRPALNVGISVSR----- 377
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
+G + Q++ +L A+ R L A + L K LE R E + Q
Sbjct: 378 VGGSAQHKAMKQVSGRLRVDLAQFRELEAFAAFGSD--LDAASKSQLERGQRMV-ELLKQ 434
Query: 419 GYYEDRSIEETLDLGWE----LLSILPESELKRVKKEMIMKYH 457
Y+ S E+ + W + +P ++++R +KE++ H
Sbjct: 435 NQYQPMSTEDQVVSVWAGTTGKMDEVPVADIRRFEKELLEYLH 477
>emb|CAB94542.1| (AL359152) ATP synthase alpha chain [Streptomyces coelicolor A3(2)]
Length = 529
Score = 121 bits (301), Expect = 1e-26
Identities = 116/463 (25%), Positives = 197/463 (42%), Gaps = 26/463 (5%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARE-NLAIVQVFEGTR 64
+E T++ + VEG+ E+++ E G L+ RE ++ F G
Sbjct: 30 EEVGTVTLAGDGIAKVEGLPSAMANELLKFE--DGTLGLALNLEEREIGCVVLGEFSGIE 87
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
+ V TGE L V V LGR+ + +G PIDG EI RR + + R
Sbjct: 88 E----GQPVSRTGEVLSVAVGEGYLGRVVDPLGNPIDGLGEIETSGRRALELQAPTVMQR 143
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQ-IARQA---KVLGEEESF 180
+ ++TG A+D M + RGQ+ I LA I Q + +
Sbjct: 144 KSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTIINQRDNWRTGDPNKQV 203
Query: 181 AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAF 240
++ A+G + + EE GA+E + A DPA + + P + + +
Sbjct: 204 RCIYVAIGQKGSTIASVRGALEENGALEYTTIVAAPASDPAGFKYLAPYTGSAIGQQWMY 263
Query: 241 DYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK-- 298
+ VL+I D++ +A R +S PGR YPG ++ + + ER ++ +
Sbjct: 264 E-GKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDAEGA 322
Query: 299 GSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDG 358
GS+T +PI+ +D++ IP IT+GQ L +L G P ++V S+SR
Sbjct: 323 GSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRPALNVGISVSR----- 377
Query: 359 IGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQ 418
+G + Q++ +L A+ R L A + L K LE R E + Q
Sbjct: 378 VGGSAQHKAMKQVSGRLRVDLAQFRELEAFAAFGSD--LDAASKSQLERGQRMV-ELLKQ 434
Query: 419 GYYEDRSIEETLDLGWE----LLSILPESELKRVKKEMIMKYH 457
Y+ S E+ + W + +P ++++R +KE++ H
Sbjct: 435 NQYQPMSTEDQVVSVWAGTTGKMDEVPVADIRRFEKELLEYLH 477
>sp|P12985|ATPA_VIBAL ATP SYNTHASE ALPHA CHAIN >gi|79234|pir||S06080 H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - Vibrio
alginolyticus >gi|48337|emb|CAA34179.1| (X16050) uncA
(AA 1-513) [Vibrio alginolyticus]
Length = 513
Score = 121 bits (300), Expect = 2e-26
Identities = 113/458 (24%), Positives = 194/458 (41%), Gaps = 32/458 (6%)
Query: 5 SKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTR 64
++ TI + ++ + G+ V GE++E+ R L+ + V
Sbjct: 25 ARNEGTIVSVSDGIIRIHGLADVMQGEMIELPGG----RYALALNLERDSVGAVVMGPYA 80
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
DL + V TG L+VPV ++LGR+ N +G+PIDG I + V + R
Sbjct: 81 DLK-EGMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGPIEAKMTSPVEVIAPGVIDR 139
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVF 184
+QTG ++D M + RGQ+ I + LA A + ++ ++
Sbjct: 140 KSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQIGKTALAID----AIINQKDSGIFSIY 195
Query: 185 AAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDM 244
A+G + EE GA++ ++ + A + A + + P + EY D
Sbjct: 196 VAIGQKASTIANVVRKLEEHGALQNTIVVVASASESAALQYLAPYAGCAMGEYFR-DRGE 254
Query: 245 QVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERA------------- 291
L++ D++ A R+IS + PGR +PG ++ + + ERA
Sbjct: 255 DALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTN 314
Query: 292 GRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSL 351
G ++GK GS+T +PI+ D++ +P IT+GQI L EL G+ P +D S+
Sbjct: 315 GEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISV 374
Query: 352 SRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRF 411
SR +G + +L+ + A A R L + L E KK L+ +
Sbjct: 375 SR-----VGGSAQTKIIKKLSGGIRTALAAYRELAAFAQFSSD--LDEATKKQLDHGQKV 427
Query: 412 EREFVAQGYYEDRSI-EETLDLGWELLSILPESELKRV 448
E + Q Y S+ ++ L + L + EL +V
Sbjct: 428 -TELMKQKQYAPMSVFDQALTIFAAERGYLDDVELNKV 464
>emb|CAA41372.1| (X58461) F1 subunit [Propionigenium modestum]
Length = 410
Score = 120 bits (299), Expect = 3e-26
Identities = 104/391 (26%), Positives = 179/391 (45%), Gaps = 27/391 (6%)
Query: 73 VRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQ 132
VR TG+ V +LGR+ N +G+PIDG E+ E + ++R + +Q
Sbjct: 27 VRATGQIAAVGAGEALLGRVVNSLGEPIDGKGELKTEKMMPLDRKAYGIISRKPVHEPLQ 86
Query: 133 TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYE 192
TGI +IDGM + RGQ+ I +A A + ++ ++ A+G
Sbjct: 87 TGIKSIDGMVPIGRGQRELIIG----DRQTGKTAVALDAIINQKDTGVKCIYVAIGQKRS 142
Query: 193 EANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTD 252
K E+ GA+E ++ A + A + + P +++ EY D VL++ D
Sbjct: 143 TVAQIVKRLEDAGALEYTIVVAATASESAPLQYMAPYTGVSMGEYF-MDKGEHVLIVYDD 201
Query: 253 MTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMPILTMP 310
++ + A RE+S + PGR +PG ++ + + ERA ++ + GSIT +PI+
Sbjct: 202 LSKHAVAYREMSLLLKRPPGREAFPGDVFYLHSRLLERAAKLSDEIGAGSITALPIIETQ 261
Query: 311 DDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQ 370
D++ IP IT+GQI L +L G P I+ S+SR +G + Q
Sbjct: 262 AGDVSAYIPTNVISITDGQIFLDSQLFNSGFRPAINAGISVSR-----VGGAAQIKAMKQ 316
Query: 371 LAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFER--EFVAQGYYEDRSIEE 428
+A Q+ A+ L + + S+ DK L +R R E + Q Y+ +EE
Sbjct: 317 VAAQVKLELAQYNEL-----LTFAQFGSDLDKATLAQLERGHRIMEILKQEQYKPFVVEE 371
Query: 429 ------TLDLGWELLSILPESELKRVKKEMI 453
T+ G+ L + +++R +KE++
Sbjct: 372 QVVSFFTVINGY--LDDIAIDQVRRFEKELL 400
>sp|P29706|ATPA_PROMO ATP SYNTHASE ALPHA CHAIN, SODIUM ION SPECIFIC
>gi|1071890|pir||S29039 Na+-transporting ATP synthase
(EC 3.6.1.-) alpha chain - Propionigenium modestum
Length = 471
Score = 120 bits (299), Expect = 3e-26
Identities = 104/391 (26%), Positives = 179/391 (45%), Gaps = 27/391 (6%)
Query: 73 VRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQ 132
VR TG+ V +LGR+ N +G+PIDG E+ E + ++R + +Q
Sbjct: 88 VRATGQIAAVGAGEALLGRVVNSLGEPIDGKGELKTEKMMPLDRKAYGIISRKPVHEPLQ 147
Query: 133 TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYE 192
TGI +IDGM + RGQ+ I +A A + ++ ++ A+G
Sbjct: 148 TGIKSIDGMVPIGRGQRELIIG----DRQTGKTAVALDAIINQKDTGVKCIYVAIGQKRS 203
Query: 193 EANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTD 252
K E+ GA+E ++ A + A + + P +++ EY D VL++ D
Sbjct: 204 TVAQIVKRLEDAGALEYTIVVAATASESAPLQYMAPYTGVSMGEYF-MDKGEHVLIVYDD 262
Query: 253 MTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMPILTMP 310
++ + A RE+S + PGR +PG ++ + + ERA ++ + GSIT +PI+
Sbjct: 263 LSKHAVAYREMSLLLKRPPGREAFPGDVFYLHSRLLERAAKLSDEIGAGSITALPIIETQ 322
Query: 311 DDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQ 370
D++ IP IT+GQI L +L G P I+ S+SR +G + Q
Sbjct: 323 AGDVSAYIPTNVISITDGQIFLDSQLFNSGFRPAINAGISVSR-----VGGAAQIKAMKQ 377
Query: 371 LAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFER--EFVAQGYYEDRSIEE 428
+A Q+ A+ L + + S+ DK L +R R E + Q Y+ +EE
Sbjct: 378 VAAQVKLELAQYNEL-----LTFAQFGSDLDKATLAQLERGHRIMEILKQEQYKPFVVEE 432
Query: 429 ------TLDLGWELLSILPESELKRVKKEMI 453
T+ G+ L + +++R +KE++
Sbjct: 433 QVVSFFTVINGY--LDDIAIDQVRRFEKELL 461
>sp|P42005|ATPA_BACST ATP SYNTHASE ALPHA CHAIN >gi|534852|dbj|BAA07253.1| (D38060) ATPase
subunit alpha [Bacillus stearothermophilus]
Length = 502
Score = 120 bits (299), Expect = 3e-26
Identities = 112/457 (24%), Positives = 198/457 (42%), Gaps = 30/457 (6%)
Query: 7 EYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAREN---LAIVQVFEGT 63
+ T+ +I + G+ V GE+VE G L+ EN + I+ + G
Sbjct: 27 DVGTVIQIGDGIARAHGLDNVMSGELVEFANAV----MGMALNLEENNVGIVILGPYTGI 82
Query: 64 RDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVA 123
++ D VR TG ++VPV ++GR+ N +G+P+DG + + R + +
Sbjct: 83 KEGD----EVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPVETTETRPIESPAPGVMD 138
Query: 124 RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVV 183
R + +QTGI AID + + RGQ+ I +A K +++ +
Sbjct: 139 RRSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIINQK----DQNMICI 194
Query: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243
+ A+G ++ + GA++ ++ A PA + P + + EY +
Sbjct: 195 YVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVAMGEYFMYK-G 253
Query: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK--GSI 301
VLV+ D++ A RE+S PGR YPG ++ + + ERA ++ K GS+
Sbjct: 254 QHVLVVYDDLSKQAAAYRELSLFVRRPPGREAYPGDIFYLHSRLLERAAKLSDAKGGGSL 313
Query: 302 TQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGK 361
T +P + DI+ IP IT+GQI L +L + P I+ S+SR +G
Sbjct: 314 TALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSRVRPAINAGLSVSR-----VGG 368
Query: 362 GRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYY 421
+ ++A L A R L + A G + T K A E + Q +
Sbjct: 369 AAQIKAMKKVAGTLRLDLAAYREL-EAFAQFGSDLDKATQAKLARGARTV--EVLKQDLH 425
Query: 422 EDRSIEETLDLGWEL----LSILPESELKRVKKEMIM 454
+ +E+ + + + L L +P +++R +KE +
Sbjct: 426 QPIPVEKQVLIIYALTRGFLDDIPVKDVRRFEKEFYL 462
>pir||S66663 Na+-transporting ATP synthase (EC 3.6.1.-) alpha chain -
Propionigenium modestum
Length = 439
Score = 120 bits (299), Expect = 3e-26
Identities = 104/391 (26%), Positives = 179/391 (45%), Gaps = 27/391 (6%)
Query: 73 VRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQ 132
VR TG+ V +LGR+ N +G+PIDG E+ E + ++R + +Q
Sbjct: 27 VRATGQIAAVGAGEALLGRVVNSLGEPIDGKGELKTEKMMPLDRKAYGIISRKPVHEPLQ 86
Query: 133 TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYE 192
TGI +IDGM + RGQ+ I +A A + ++ ++ A+G
Sbjct: 87 TGIKSIDGMVPIGRGQRELIIG----DRQTGKTAVALDAIINQKDTGVKCIYVAIGQKRS 142
Query: 193 EANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTD 252
K E+ GA+E ++ A + A + + P +++ EY D VL++ D
Sbjct: 143 TVAQIVKRLEDAGALEYTIVVAATASESAPLQYMAPYTGVSMGEYF-MDKGEHVLIVYDD 201
Query: 253 MTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSITQMPILTMP 310
++ + A RE+S + PGR +PG ++ + + ERA ++ + GSIT +PI+
Sbjct: 202 LSKHAVAYREMSLLLKRPPGREAFPGDVFYLHSRLLERAAKLSDEIGAGSITALPIIETQ 261
Query: 311 DDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKGRTREDHPQ 370
D++ IP IT+GQI L +L G P I+ S+SR +G + Q
Sbjct: 262 AGDVSAYIPTNVISITDGQIFLDSQLFNSGFRPAINAGISVSR-----VGGAAQIKAMKQ 316
Query: 371 LAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFER--EFVAQGYYEDRSIEE 428
+A Q+ A+ L + + S+ DK L +R R E + Q Y+ +EE
Sbjct: 317 VAAQVKLELAQYNEL-----LTFAQFGSDLDKATLAQLERGHRIMEILKQEQYKPFVVEE 371
Query: 429 ------TLDLGWELLSILPESELKRVKKEMI 453
T+ G+ L + +++R +KE++
Sbjct: 372 QVVSFFTVINGY--LDDIAIDQVRRFEKELL 400
>sp|P27179|ATPA_SYNY3 ATP SYNTHASE ALPHA CHAIN >gi|67817|pir||PWYBA H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - Synechocystis sp.
(strain PCC 6803) >gi|47513|emb|CAA41135.1| (X58128)
ATPase subunit alpha [Synechocystis PCC6803]
>gi|1651808|dbj|BAA16735.1| (D90900) ATP synthase a
subunit [Synechocystis sp.]
Length = 503
Score = 119 bits (296), Expect = 6e-26
Identities = 105/400 (26%), Positives = 174/400 (43%), Gaps = 33/400 (8%)
Query: 71 TSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDF 130
++V+ TG+ ++P+ M+GR+ + +G+PIDG I R + + R +
Sbjct: 87 STVKTTGQIAQIPIGDAMVGRVVDSLGRPIDGKGPISSTATRLLESPAPGIIERKSVCEP 146
Query: 131 IQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGIT 190
+QTGI+AID M + RGQ+ I +A K E V+ A+G
Sbjct: 147 MQTGITAIDAMIPIGRGQRELIIGDRKTGKTAIAIDTIINQK----SEDVICVYVAIGQK 202
Query: 191 YEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVIL 250
+ E GA+ ++ A+DPA + + P T+AE+ + LVI
Sbjct: 203 ASTVAQIIDTLTEKGAMAYTIVVAANANDPATLQYLAPYTGATLAEHFMYQ-GKSTLVIY 261
Query: 251 TDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG--SITQMPILT 308
D++ +A R++S PGR YPG ++ + + ERA ++ G S+T +P++
Sbjct: 262 DDLSKQAQAYRQMSLLMRRPPGREAYPGDVFYIHSRLLERAAKLSDALGGGSMTALPVIE 321
Query: 309 MPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL--------MKDGIG 360
D++ IP IT+GQI LS +L G P I+ S+SR+ MK G
Sbjct: 322 TQAGDVSAYIPTNVISITDGQIFLSTDLFNAGFRPAINAGISVSRVGSAAQTKAMKKVAG 381
Query: 361 KGRTR-------EDHPQLAQQLYAA----YAEGRSLRDLVAVVGEEALSETDKKYLEFAD 409
K + E Q A L AA A G+ LR L+ LS ++ + +A
Sbjct: 382 KLKLELAQFAELEAFSQFASDLDAATQAQLARGQRLRQLLKQPENSPLSVWEQVAISYAG 441
Query: 410 RFEREFVAQGYYEDRSIEETLDLGWELLSILPESELKRVK 449
GY + +++ + L L ++ K V+
Sbjct: 442 -------LNGYIDTIPVDKVTEFAQGLRDYLKANKAKYVE 474
>sp|P43714|ATPA_HAEIN ATP SYNTHASE ALPHA CHAIN >gi|1073878|pir||F64071 H+-transporting
ATP synthase (EC 3.6.1.34) alpha chain - Haemophilus
influenzae (strain Rd KW20) >gi|1573459|gb|AAC22139.1|
(U32730) ATP synthase F1, subunit alpha (atpA)
[Haemophilus influenzae Rd]
Length = 513
Score = 119 bits (295), Expect = 8e-26
Identities = 108/437 (24%), Positives = 179/437 (40%), Gaps = 31/437 (7%)
Query: 5 SKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTR 64
++ TI + ++ + G+ V GE++ + R L+ + V
Sbjct: 25 ARNTGTIVSVSDGIIRIHGLSDVMQGEMIALPGN----RYAMALNLERDSVGAVVMGPYA 80
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
DL + V+ TG L+VPV +LGR+ N +G+PIDG EI + V + R
Sbjct: 81 DL-AEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPIDGKGEIENDGFSPVEVIAPGVIDR 139
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVF 184
+QTG A+D M + RGQ+ I LA A + ++
Sbjct: 140 RSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGKTALAID----AIINQRNSGIKCIY 195
Query: 185 AAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDM 244
A+G + EE GA+ ++ A + A + + P + EY D
Sbjct: 196 VAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQYLAPYAGCAMGEYFR-DRGE 254
Query: 245 QVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERA------------- 291
L++ D++ A R+IS PGR YPG ++ + + ERA
Sbjct: 255 DALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNEDYVEKFTK 314
Query: 292 GRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSL 351
G ++GK GS+T +PI+ D++ +P IT+GQI L L GI P ++ S+
Sbjct: 315 GEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESNLFNSGIRPAVNPGISV 374
Query: 352 SRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRF 411
SR +G + +LA + A A+ R L + L + +K L ++
Sbjct: 375 SR-----VGGSAQTKVIKKLAGGIRTALAQYRELAAFAQFASD--LDDATRKQLSHGEKV 427
Query: 412 EREFVAQGYYEDRSIEE 428
E + Q + S+ E
Sbjct: 428 -TELLKQKQFTPLSVAE 443
>sp|P26679|ATPA_ENTHR ATP SYNTHASE ALPHA CHAIN >gi|153571|gb|AAA26857.1| (M90060) H+
ATPase [Enterococcus faecalis] >gi|153579|gb|AAA26864.1|
(M64265) F1F0-ATPase alpha subunit [Enterococcus
faecalis]
Length = 518
Score = 117 bits (291), Expect = 2e-25
Identities = 92/352 (26%), Positives = 162/352 (45%), Gaps = 14/352 (3%)
Query: 6 KEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARE-NLAIVQVFEGTR 64
+E T++ + + G++ GE++E +G Q L++ + + I+ FE R
Sbjct: 26 EEIGTVTYVGDGIARAHGLENAMSGELLEFS--NGSYGMAQNLESNDVGIIILGDFESIR 83
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
+ D V+ TG+ ++VPV ++GR+ N +G+PIDG EI+ + R V + R
Sbjct: 84 EGD----KVKRTGKIMEVPVGDALIGRVVNPLGQPIDGLGEIVTDKVRPVEAMAPGVMQR 139
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVF 184
+ +QTG+ AID + + RGQ+ + +A K + ++
Sbjct: 140 KSVNEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTSIAIDTILNQK----GQDMICIY 195
Query: 185 AAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDM 244
A+G ++ ++ GA++ ++ A PA I P + E ++
Sbjct: 196 VAIGQKDSTVRTQVETLKKYGAMDYTIVVNAGASQPAPLLYIAPYAGTAMGEEFMYN-GK 254
Query: 245 QVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGSIT 302
VL+I D++ A RE+S PGR YPG ++ + + ERA ++ GS+T
Sbjct: 255 HVLIIFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDLGGGSMT 314
Query: 303 QMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354
+P + DI+ IP IT+GQI L +L G P +D S+SR+
Sbjct: 315 ALPFVETQAGDISAYIPTNVISITDGQIFLESDLFYAGTRPAVDAGLSVSRV 366
>pir||H82036 ATP synthase F1, alpha chain VC2766 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9657367|gb|AAF95905.1|
(AE004342) ATP synthase F1, alpha subunit [Vibrio
cholerae]
Length = 523
Score = 116 bits (289), Expect = 4e-25
Identities = 94/363 (25%), Positives = 156/363 (42%), Gaps = 23/363 (6%)
Query: 5 SKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTR 64
++ TI + ++ + G+ V GE++E+ R L+ + V
Sbjct: 35 ARNEGTIVSVSDGIIRIHGLADVMQGEMIELPGN----RYALALNLERDSVGAVVMGPYA 90
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
DL + V TG L+VPV ++LGR+ N +G+PIDG I + V + R
Sbjct: 91 DLR-EGMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGPIGAKQTSPVEVIAPGVIDR 149
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVF 184
+QTG ++D M + RGQ+ I LA K G ++
Sbjct: 150 KSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQKNSG----IYSIY 205
Query: 185 AAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDM 244
A+G + EE GA++ ++ + A + A + + P + EY D
Sbjct: 206 VAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQYLAPYSGCAMGEYFR-DRGE 264
Query: 245 QVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERA------------- 291
L++ D++ A R+IS PGR +PG ++ + + ERA
Sbjct: 265 DALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTK 324
Query: 292 GRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSL 351
G ++GK GS+T +PI+ D++ +P IT+GQI L EL G+ P +D S+
Sbjct: 325 GEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISV 384
Query: 352 SRL 354
SR+
Sbjct: 385 SRV 387
>emb|CAA69203.1| (Y07895) mitochondrial ATP synthase alpha subunit precursor
[Strongylocentrotus purpuratus]
Length = 551
Score = 116 bits (287), Expect = 7e-25
Identities = 114/434 (26%), Positives = 185/434 (42%), Gaps = 25/434 (5%)
Query: 3 EMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEG 62
E +E + I + V G+K + E+VE + KG L+ + V VF G
Sbjct: 65 ENLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGL----KGMALNLEPDNVGVVVF-G 119
Query: 63 TRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPV 122
L + V+ +G + VPV +LGR+ + +G PIDG + E R V G +
Sbjct: 120 NDKLIKEGDVVKRSGAIVDVPVGESILGRVVDALGTPIDGKGPLGTEHRARV-GTKAPGI 178
Query: 123 ARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEE----E 178
R R+ +QTGI A+D + + RGQ+ I +A K +E
Sbjct: 179 PRISVREPMQTGIKAVDSLVLICRGQRELIIGDRQTGKTAVAIDTIINQKRFNDEAEEKN 238
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
++ A+G K ++ A++ ++ A D A + + P + E+
Sbjct: 239 KLYCIYVAIGQKRSTVAQIVKRLHDSDALKYTIIVSATASDAAPLQYLAPYSGCAMGEFF 298
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK- 297
D L+I D++ A R++S PGR YPG ++ + + ERA ++
Sbjct: 299 R-DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNPDF 357
Query: 298 -KGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMK 356
GS+T +P++ D++ IP IT+GQI L EL KGI P I+V S+SR
Sbjct: 358 GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIPPAINVGLSVSR--- 414
Query: 357 DGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFER--E 414
+G + Q+A + E R VA + S+ D +R R E
Sbjct: 415 --VGSAAQVKAMKQVAGSMKLDLGEYRE----VAAFAQFG-SDLDASTQNLLNRGVRLTE 467
Query: 415 FVAQGYYEDRSIEE 428
+ QG Y ++E+
Sbjct: 468 LLKQGQYTPMAVED 481
>pir||S71146 H+-transporting ATP synthase (EC 3.6.1.34) beta chain - Anthoceros
formosae chloroplast (fragment)
>gi|1396041|dbj|BAA07795.1| (D43695) atpB [Anthoceros
formosae]
Length = 492
Score = 115 bits (284), Expect = 1e-24
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 23/431 (5%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKG----VAYGEVVEIETESGEKRKG--QVLDARENLAIV 57
+SK IS+I GP++ V G + +V + +G++ +V N +
Sbjct: 14 ISKNVGHISQIIGPVLDVTFPPGKMPNIYNSLIVRGQNPAGQEINVTCEVQXLLGNNKVR 73
Query: 58 QVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGA 117
V D + V TG L VPV LGRIFN +G+P+D I +H +
Sbjct: 74 AVAMSATDGLTRGMKVTDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGAIDVSTTFPIHRS 133
Query: 118 PLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEE 177
+TGI +D + + G K+ F G+G+ L ++ + +
Sbjct: 134 APAFTXLDTKLSIFETGIKVVDLLASYRCGGKIGPFGGAGVGKTVLIMELINN---IAKA 190
Query: 178 ESFAVVFAAMGITYEEANFFKKSFEETGAIE-------RAVLFLNLADDPAIERIITPRM 230
VF +G E N +E+ I + L ++P R+
Sbjct: 191 HGGVSVFGGVGERTREGNDLYMEMKESKVINEQDISESKVALVYGQMNEPPGARMRVGST 250
Query: 231 ALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYER 290
LT+AEY V + + ++ + +A E+SA+ +P GY + T++ ++ ER
Sbjct: 251 VLTMAEYFRDVNKQDVSLFIDNILCFVQAGSEVSASSGRMPSAVGYQPTLSTEMGSLQER 310
Query: 291 AGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPS 350
K+GSIT + + +P DD+T P T ++ VL R L KGIY +D L S
Sbjct: 311 ITPT--KEGSITSIQAVYVPVDDLTDSAPATTFAHSDATTVLFRGLAAKGIYLVVDPLDS 368
Query: 351 LSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADR 410
+++ I E+H + AQ + + L+D++A +G + SE D+ + A +
Sbjct: 369 TFTMLQPWI----VGEEHYETAQGVKQTLQRYKELQDIIATLGSDESSEEDRLTVARARK 424
Query: 411 FEREFVAQGYY 421
ER F++Q ++
Sbjct: 425 IER-FLSQPFF 434
>gi|7524980 ATPase subunit 1 [Dictyostelium discoideum]
>gi|11266659|pir||T43756 ATPase subunit 1 [imported] -
slime mold (Dictyostelium discoideum) mitochondrion
>gi|4958883|dbj|BAA78060.1| (AB000109) ATPase subunit 1
[Dictyostelium discoideum]
Length = 519
Score = 114 bits (282), Expect = 3e-24
Identities = 90/357 (25%), Positives = 157/357 (43%), Gaps = 13/357 (3%)
Query: 3 EMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEG 62
++S +Y + I ++ V G+ + GE VE G+ G L+ + +F G
Sbjct: 38 KVSSKYGKVLFIKDGVVKVSGLSQIKIGEKVEFV---GKNLYGMALNLEATSVGIVIF-G 93
Query: 63 TRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNP- 121
+ V+ + + V MLGR+ + +G+PIDG E+ V
Sbjct: 94 EDTAIYEGVIVKRCEQNFAIKVDKTMLGRVVDVLGQPIDGLGELKDTKTTRVMSVERKAP 153
Query: 122 --VARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEES 179
V R + + TG+ +D + + RGQ+ I + +A +V +
Sbjct: 154 GIVTRKSVHESMLTGVKIVDALLPIGRGQRELIIGDRQTGKSAIAVDAILNQQV---NKD 210
Query: 180 FAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLA 239
++ A+G + GA+E ++ ++ A D A + + P T+ EY
Sbjct: 211 IVCIYVAVGQKKSTVRRLVEMLNTKGALEYTIVVVSTASDAAPLQFLAPYTGCTIGEYFR 270
Query: 240 FDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG 299
D L++ D++ + A R++S PGR YPG ++ + + ERA ++ K G
Sbjct: 271 -DEGKHALIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKLNEKYG 329
Query: 300 --SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354
S+T PI+ D++ IP IT+GQI L +EL KGI P ++V S+SR+
Sbjct: 330 CGSLTAFPIVETQAGDVSAYIPTNIISITDGQIFLEKELFNKGIRPAVNVGLSVSRV 386
>sp|P57122|ATPA_BUCAI ATP SYNTHASE ALPHA CHAIN >gi|10038699|dbj|BAB12734.1| (AP001118)
ATP synthase alpha chain [Buchnera sp. APS]
Length = 512
Score = 113 bits (281), Expect = 3e-24
Identities = 106/405 (26%), Positives = 168/405 (41%), Gaps = 30/405 (7%)
Query: 73 VRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQ 132
VR TG+ L+VPV + LGR+ N +G PIDG I + V + R IQ
Sbjct: 88 VRCTGKILEVPVGDNFLGRVVNALGFPIDGKDSIQNDGFFPVEADAPGVIDRKSVNQPIQ 147
Query: 133 TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYE 192
TG ID M + RGQ+ I LA K G ++ A+G
Sbjct: 148 TGYKVIDSMIPIGRGQRELIIGDRQTGKTALAIDTIINQKQSG----IKCIYVAIGQKLS 203
Query: 193 EANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTD 252
K EE A+ ++ + A + A + + P +AE+ + L+I D
Sbjct: 204 TIINVVKKLEENNALFNTIIVVASASEAASLQYLAPYSGCAMAEFFR-NKGEDSLIIYDD 262
Query: 253 MTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGR-------------IRGKKG 299
++ + A R+IS PGR +PG ++ + + ERA R I GK G
Sbjct: 263 LSKHAVAYRQISLLLRRPPGREAFPGDIFYLHSRLLERASRVSMEYVQKITKNKITGKTG 322
Query: 300 SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGI 359
SIT +PI+ D++ +P IT+GQI L L GI P ++ S+SR +
Sbjct: 323 SITALPIIETQSGDVSAFVPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSR-----V 377
Query: 360 GKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQG 419
G +L+ + A A+ + L + L +T +K L + E + Q
Sbjct: 378 GSAAQTTIIKKLSSGIRTALAQYQELAAFSQFSSD--LDDTTRKQLNHGQKI-TELLKQK 434
Query: 420 YYEDRSIEETLDLGW----ELLSILPESELKRVKKEMIMKYHPKY 460
Y SI E + + L + ++ + +KE+++ H Y
Sbjct: 435 QYSPISIAEQALILFVAENNFLDDISIDKITKFEKEILIYAHNYY 479
>dbj|BAA83611.1| (AB022018) F1F0-ATPase alpha subunit [Desulfovibrio vulgaris]
Length = 488
Score = 112 bits (277), Expect = 1e-23
Identities = 116/463 (25%), Positives = 200/463 (43%), Gaps = 35/463 (7%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDAREN---LAIVQ 58
+EMS E T+ + + V GV+ E++E G VL+ E+ +A++
Sbjct: 23 VEMS-ETGTVLSVGDGIARVYGVRNAMAMELLEFPGGL----MGMVLNLEEDNVGVALLG 77
Query: 59 VFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAP 118
G ++ D V+ TG+ VPV +++GR+ N +G+PIDG + ++ R V
Sbjct: 78 EDTGIKEGD----PVKRTGKIFSVPVGDEVMGRVLNPLGQPIDGLGPLEAKEFRPVELKA 133
Query: 119 LNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEE 178
+AR + TGI AID M + RGQ+ I + A + +
Sbjct: 134 PGIIARKSVHQPMPTGIKAIDAMTPIGRGQRELIIG----DRQTGKTAVCIDAILAQRDT 189
Query: 179 SFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYL 238
+ A+G + + GA+E + A +PA + I+ T+AE+
Sbjct: 190 GIRCFYVAIGQKKATVALVADTLRKHGAMEYTTIISATASEPAPLQFISAYSGCTMAEFY 249
Query: 239 AFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK- 297
D L+I D++ R++S PGR YPG ++ + + ERA ++
Sbjct: 250 R-DKGDHALIIYDDLSKQAVGYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKVNDSL 308
Query: 298 -KGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMK 356
GS+T +PI+ D++ IP IT+GQ+ L L GI P I+V S+SR
Sbjct: 309 GAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFNAGIRPAINVGLSVSR--- 365
Query: 357 DGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFER--E 414
+G + Q+A + A+ R L + S+ DK + DR R E
Sbjct: 366 --VGGAAQIKAMKQVAGTMRLDLAQYRELAAFA-----QFGSDLDKATKQKLDRGARLVE 418
Query: 415 FVAQGYYEDRSIEETLDLGWE----LLSILPESELKRVKKEMI 453
+ Q Y+ +E+ + + L+ +P +++ + EM+
Sbjct: 419 LLKQPQYQPMPVEQQVASMYAATRGLMDDVPVLAIRKFEAEML 461
>sp|P33252|ATPA_MYCGA ATP SYNTHASE ALPHA CHAIN >gi|282593|pir||S24337 H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - Mycoplasma
gallisepticum >gi|44300|emb|CAA45549.1| (X64256)
adenosinetriphosphatase [Mycoplasma gallisepticum]
Length = 518
Score = 111 bits (276), Expect = 1e-23
Identities = 125/472 (26%), Positives = 206/472 (43%), Gaps = 35/472 (7%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGT 63
+S + I I ++ V G+ V E+VE E + G L+ N V +
Sbjct: 24 ISDQKGYIITIGDGIVRVSGLDDVLLNELVEFENGA----YGIALNLEPNSVGVVMLSDY 79
Query: 64 RDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHG-APLNPV 122
DL + +SV+ TG+ ++ PV +LGR+ + IG PIDG E+ +++ G AP+ +
Sbjct: 80 YDLK-EGSSVKRTGKVIQAPVGDGLLGRVIDPIGLPIDGKGEL-----KNISGYAPIERL 133
Query: 123 A-----RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEE 177
A R ++TGI AID M + +GQ+ I +A K
Sbjct: 134 AYGVMQRKSVHQPLETGILAIDSMLPIGKGQRELIIGDRQTGKTTIALDTIINQK----G 189
Query: 178 ESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEY 237
++ ++ A+G + EETGA+ + A + A I P +T+ E
Sbjct: 190 KNVNCIYVAIGQKNSSVAQITRLLEETGAMAYTTIVSATASELAALSYIAPFAGVTIGEE 249
Query: 238 LAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK 297
VL++ D++ + A R +S PGR YPG ++ + + ERAG++ +
Sbjct: 250 W-MRQGKDVLIVYDDLSKHAVAYRALSLLLRRPPGREAYPGDIFYLHSRLLERAGKLSDE 308
Query: 298 --KGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLM 355
GSIT +PI+ DI+ IP IT+GQ+ + L G P I V S+SR
Sbjct: 309 LGAGSITALPIIETQAGDISAYIPTNVISITDGQLFTTTSLFNSGQRPAIHVGLSVSR-- 366
Query: 356 KDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREF 415
+G + Q++ L A+ R L D + + +ET K LE R F
Sbjct: 367 ---VGSAAQLKSIKQVSGSLKLELAQYREL-DTFSQFSSDLDAET-KIVLEHGARVMEMF 421
Query: 416 -VAQGYYEDRSIEETLDLGWE--LLSILPESELKRVKKEMI--MKYHPKYRK 462
Q D++ E L G + + +P + + K+ ++ +K P Y+K
Sbjct: 422 KQPQAKPIDQTSEAVLLFGIKNRFIKWIPTDHIIKFKEFILDKIKQDPVYKK 473
>sp|Q50329|ATPA_MYCPN ATP SYNTHASE ALPHA CHAIN >gi|2127623|pir||S62847 H+-transporting
ATP synthase (EC 3.6.1.34) alpha chain - Mycoplasma
pneumoniae (strain ATCC 29342) >gi|2146067|pir||S73568
ATP synthase alpha chain - Mycoplasma pneumoniae (SGC3)
(ATCC 29342) >gi|1209764|gb|AAC43657.1| (U43738) ATP
synthase alpha chain [Mycoplasma pneumoniae]
>gi|1673910|gb|AAB95890.1| (AE000024) ATP synthase alpha
chain [Mycoplasma pneumoniae]
Length = 518
Score = 110 bits (272), Expect = 4e-23
Identities = 93/352 (26%), Positives = 152/352 (42%), Gaps = 12/352 (3%)
Query: 5 SKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTR 64
+ E + + + V G++ E++E E +G L+ +N V +F
Sbjct: 25 NSEIGKVISVADGIAKVSGLENALLNELIEFENNV----QGIALNLEQNTVGVALFGDYS 80
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
+ +T+ R T ++ PV MLGRI N +G+P+DG I E+ V + R
Sbjct: 81 KIREGSTAKR-THNVMQTPVGDVMLGRIVNALGEPVDGRGPIKAEEFDQVEKIAPGVMTR 139
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVF 184
++TGI ID + + +GQ+ I IA + + V+
Sbjct: 140 KTVNQPLETGILTIDALFPIGKGQRELIVG----DRQTGKTSIAIDTIINQRGKDVYCVY 195
Query: 185 AAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDM 244
AMG E T +++ + A DPA +TP +T+AEY
Sbjct: 196 VAMGQKNSSVAQIVHQLEVTDSMKYTTVVCATASDPASMIYLTPFTGITIAEYW-LKQGK 254
Query: 245 QVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKK--GSIT 302
VL++ D++ + A R +S PGR +PG ++ + + ERA R+ + GSIT
Sbjct: 255 DVLIVFDDLSKHAIAYRTLSLLLRRPPGREAFPGDVFYLHSRLLERACRLNEEHGGGSIT 314
Query: 303 QMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354
+PI+ DI+ IP IT+GQ+ + L G P I V S+SR+
Sbjct: 315 ALPIIETQAGDISAYIPTNVISITDGQLFMVSNLFNSGQRPAIHVGLSVSRV 366
>sp|P47641|ATPA_MYCGE ATP SYNTHASE ALPHA CHAIN >gi|1361449|pir||D64244 H+-transporting
ATP synthase (EC 3.6.1.34) alpha chain - Mycoplasma
genitalium >gi|3844993|gb|AAC71629.1| (U39722) ATP
synthase F1, subunit alpha (atpA) [Mycoplasma
genitalium]
Length = 518
Score = 104 bits (258), Expect = 2e-21
Identities = 108/469 (23%), Positives = 191/469 (40%), Gaps = 25/469 (5%)
Query: 5 SKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTR 64
+ E + + + V G++ E+++ E +G VL+ +N + +F
Sbjct: 25 NSEIGQVISVADGIAKVSGLENALLNELIQFENNI----QGIVLNLEQNTVGIALFGDYS 80
Query: 65 DLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVAR 124
L +T+ R T +K PV MLGRI N +G+ IDG +I + + + R
Sbjct: 81 SLREGSTAKR-THSVMKTPVGDVMLGRIVNALGEAIDGRGDIKATEYDQIEKIAPGVMKR 139
Query: 125 AYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVF 184
++TGI ID + + +GQ+ I +A K ++ V+
Sbjct: 140 KSVNQPLETGILTIDALFPIGKGQRELIVGDRQTGKTAIAIDTIINQK----DKDVYCVY 195
Query: 185 AAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDM 244
A+G E +++ + A D ++P +T+AEY
Sbjct: 196 VAIGQKNSSVAQIVHQLEVNDSMKYTTVVCATASDSDSMVYLSPFTGITIAEYW-LKKGK 254
Query: 245 QVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKG--SIT 302
VL++ D++ + A R +S + PGR +PG ++ + + ERA ++ + G SIT
Sbjct: 255 DVLIVFDDLSKHAVAYRTLSLLLKRPPGREAFPGDVFYLHSRLLERACKLNDENGGGSIT 314
Query: 303 QMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKG 362
+PI+ DI+ IP IT+GQ+ + L G P I + S+SR +G
Sbjct: 315 ALPIIETQAGDISAYIPTNVISITDGQLFMVSSLFNAGQRPAIQIGLSVSR-----VGSA 369
Query: 363 RTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFEREFVAQGYYE 422
+ Q L A+ L D + G + L E KK LE R
Sbjct: 370 AQTKAIKQQTGSLKLELAQYSEL-DSFSQFGSD-LDENTKKVLEHGKRVMEMIKQPNGKP 427
Query: 423 DRSIEETLDL---GWELLSILPESELKRVKKEMIMKY---HPKYRKRSS 465
+ E L L + +P E+ + K+ + ++ HP +++ S+
Sbjct: 428 YSQVHEALFLFAINKAFIKFIPVDEIAKFKQRITEEFNGSHPLFKELSN 476
>pir||C82929 ATP synthase alpha chain UU132 [imported] - Ureaplasma urealyticum
>gi|6899091|gb|AAF30538.1|AE002114_5 (AE002114) ATP
synthase alpha chain [Ureaplasma urealyticum]
Length = 799
Score = 100 bits (247), Expect = 3e-20
Identities = 93/354 (26%), Positives = 158/354 (44%), Gaps = 14/354 (3%)
Query: 4 MSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGT 63
++ E + + +++V+G+ V E+V E +G L+ E+ A+ V G
Sbjct: 25 LTLEVGNVISLGDGIVLVDGLDNVMLNEIVRFENGV----EGMALNLEED-AVGVVLLGD 79
Query: 64 RDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVA 123
+ V T ++VPV MLGR+ + +GK +D I+ + +
Sbjct: 80 YSNIKEGDRVYRTKRIVEVPVGDVMLGRVVDALGKAVDNKGNIVANKFSVIEKIAPGVMD 139
Query: 124 RAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVV 183
R ++TGI +ID M + +GQ+ I IA A + + + V
Sbjct: 140 RKSVHQPLETGILSIDAMFPIGKGQRELIIGD----RQTGKTTIAIDAIINQKGRNVNCV 195
Query: 184 FAAMGITYEEANFFKKSFEETGAIE-RAVLFLNLADDPAIERIITPRMALTVAEYLAFDY 242
+ A+G + E GA+E V+ N ++ PA++ I P +T+AE
Sbjct: 196 YVAIGQKNSTIANVVRELEAHGAMEYTTVVTANASELPALQ-YIAPFTGVTIAEEWMHQ- 253
Query: 243 DMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGK--KGS 300
VL++ D++ + A R +S PGR YPG ++ + + ERA +++ + GS
Sbjct: 254 GKDVLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHSRLLERACKLKDELGAGS 313
Query: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354
IT +PI+ DI+ IP IT+GQI + L G P ID S+SR+
Sbjct: 314 ITALPIIETQAGDISAYIPTNVISITDGQIFMMTSLFNAGQRPAIDAGQSVSRV 367
>gb|AAG23339.1| (AY007705) ATPase alpha subunit [Trypanosoma brucei brucei]
Length = 585
Score = 99.8 bits (245), Expect = 6e-20
Identities = 97/399 (24%), Positives = 170/399 (42%), Gaps = 26/399 (6%)
Query: 3 EMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEG 62
EM +I L+ G GVAY +++I+ G V + ++ I +
Sbjct: 50 EMIGYVHSIDGTIATLIPAPGNPGVAYNTIIQIQVSPTTFAAGLVFNLEKDGRIGIILMD 109
Query: 63 TRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVH------- 115
V TG+ L +PV +LG++ N +G + G ++ RR +
Sbjct: 110 NITEVQSGQKVMATGQLLHIPVGAGVLGKVVNPLGHEVPVG--LVTRSRRLLDSTLGKVD 167
Query: 116 -GAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSG------SGLPHNQLAAQIA 168
GAP N V+R+ + TG A+D M + RGQ+ I +G + + + + Q+
Sbjct: 168 TGAP-NIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELICNGDRQTGKTSIAVSTIINQVR 226
Query: 169 RQAKVLGEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITP 228
++L + ++ + ++G + + GA+ + A +PA + + P
Sbjct: 227 INQQILSKNAVISI-YVSIGQRCSNVARIHRLLQSYGALRYTTVMAATAAEPAGLQYLAP 285
Query: 229 RMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIY 288
+T+ EY + L + D++ A R+IS PGR YPG ++ + +
Sbjct: 286 YAGVTMGEYF-MNRGRHCLCVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLL 344
Query: 289 ERAGRIRGKKG--SITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPID 346
ERA + KG S+T +PI+ +D+T I IT+GQI L +L G P ++
Sbjct: 345 ERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVN 404
Query: 347 VLPSLSRLMKDGIGKGRTREDHPQLAQQLYAAYAEGRSL 385
+ S+SR +G +A +L AE R L
Sbjct: 405 IGLSVSR-----VGSSAQNAAMKGVAGKLKGILAEYRKL 438
>pir||E72733 probable membrane-associated ATPase alpha chain APE0405 - Aeropyrum
pernix (strain K1) >gi|5104045|dbj|BAA79361.1|
(AP000059) 598aa long hypothetical membrane-associated
ATPase alpha chain [Aeropyrum pernix]
Length = 598
Score = 94.8 bits (232), Expect = 2e-18
Identities = 91/342 (26%), Positives = 150/342 (43%), Gaps = 33/342 (9%)
Query: 133 TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESFAVVFAAMGITYE 192
TG+ ID + +G + G G +A+ + E+ V++ G
Sbjct: 221 TGVRIIDTFFPMAKGGTGAVPGGFGTGKTVTLHSLAQWS------EARVVIYIGCGERGN 274
Query: 193 EANFFKKSFEE-----TGA--IERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQ 245
E + F + TG ++R VL N ++ P R + + +T+AEY D
Sbjct: 275 EMTEVLERFPQYKDPWTGKPLMDRTVLIANTSNMPVAAREASIYVGITIAEYYR-DMGYD 333
Query: 246 VLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRG-----KKGS 300
VL++ + + EALREI+ EE+P GYP Y+ + LA YERAGR++ + GS
Sbjct: 334 VLLVADSTSRWAEALREIAGRLEEMPAEEGYPSYLASRLAEFYERAGRVKALGSPERSGS 393
Query: 301 ITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLM----- 355
+T + ++ P D + P+ T L +L YP I+ L S S +
Sbjct: 394 VTVVGAVSPPGGDFSEPVTSHTTRFIRVFWALDTKLAYSRHYPAINWLMSYSAYVDLVTQ 453
Query: 356 --KDGIGKGRTREDHPQLAQQLYAAYAEGRSLRDLVAVVGEEALSETDKKYLEFADRFER 413
+ + K R RE + A + +E L+++V +VG E L E DK LE A +
Sbjct: 454 WWHENVDK-RWREYRDE-AMDILLRESE---LQEIVRLVGTEGLDEKDKMVLETARLIKD 508
Query: 414 EFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMK 455
F+ Q ++ T + LL ++ ++ R E+I K
Sbjct: 509 GFLKQNAFDPIDAFATPQKQFRLLKMI--MDIHRKSLELIEK 548
>pir||B82941 ATP synthase alpha chain UU053 [imported] - Ureaplasma urealyticum
>gi|6899001|gb|AAF30458.1|AE002104_11 (AE002104) ATP
synthase alpha chain [Ureaplasma urealyticum]
Length = 511
Score = 86.6 bits (211), Expect = 5e-16
Identities = 82/359 (22%), Positives = 158/359 (43%), Gaps = 21/359 (5%)
Query: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFE 61
M+ +K I I+ ++ V G+ + ++ ++ + K V+ A+E+LA + +
Sbjct: 1 MQNTKANPRIKSIFNYIVTVSGIYDYQHHQIFVLKNDPTVKLF--VISAKEDLAYLLISN 58
Query: 62 GTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIG-----KPIDGGPEIIPEDRRDVHG 116
++++ + T V ++ G+I + KP++ P G
Sbjct: 59 EHANINIGDEIIE-TNREENVVTDLNYFGKIIDINNNFIWPKPLNNLPSAKIAQTNPAFG 117
Query: 117 APLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGE 176
N + + + TGI AID + + +GQ+ I +A G
Sbjct: 118 LAHNLMTVKTLNEQLNTGIVAIDLLIPIGKGQRELIIGDRQTGKTHIALNTIINQSRAGT 177
Query: 177 EESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDP--AIERIITPRMALTV 234
+ ++ A+G E ++ + A++ ++ D P A E+ + P + +
Sbjct: 178 K----CIYVAIGQKRESLTTVYETLKAHDALKNTIII----DAPLTAYEQYLAPYIGMAH 229
Query: 235 AEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRI 294
AE L++ D VL++ D+T + +RE++ + G+ P ++ +++ ERAG
Sbjct: 230 AENLSYQDD--VLIVFDDLTKHANIIREMALLTNKPVGKEAMPSDVFFSHSSLLERAGSF 287
Query: 295 RGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSR 353
+ +K +IT +PIL D DIT I IT+GQIV S +L G P I++ S+SR
Sbjct: 288 KNRK-TITALPILQTVDGDITSLISSNIISITDGQIVTSTDLFAAGKVPAINIDLSVSR 345
>gb|AAF91182.1|AF207903_3 (AF207903) vacuolar ATP synthase subunit B VMAB [Aspergillus
nidulans]
Length = 103
Score = 72.6 bits (175), Expect = 9e-12
Identities = 35/70 (50%), Positives = 47/70 (67%)
Query: 390 AVVGEEALSETDKKYLEFADRFEREFVAQGYYEDRSIEETLDLGWELLSILPESELKRVK 449
AVVGEEALS DK LEF ++FER F+ Q YE RSI E+LD+ W LL I P L R+
Sbjct: 5 AVVGEEALSSEDKLSLEFLEKFERTFINQSAYESRSIFESLDIAWNLLRIYPPHLLNRIP 64
Query: 450 KEMIMKYHPK 459
K ++ +++ +
Sbjct: 65 KRVLDEFYAR 74
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.138 0.388
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167207463
Number of Sequences: 2977
Number of extensions: 7240187
Number of successful extensions: 22968
Number of sequences better than 1.0e-10: 1460
Number of HSP's better than 0.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 1361
Number of HSP's that attempted gapping in prelim test: 17832
Number of HSP's gapped (non-prelim): 1590
length of query: 465
length of database: 189,106,746
effective HSP length: 58
effective length of query: 407
effective length of database: 154,394,500
effective search space: 62838561500
effective search space used: 62838561500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 167 (69.5 bits)