BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1189 (PAB1189) DE:SY V-ATPASE PROTEOLIPID
(258 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75027 sy v-atpase proteolipid PAB1189 - Pyrococcus abyssi ... 487 e-137
pir||B71213 probable chemoreceptor protein - Pyrococcus horikosh... 404 e-112
pir||T44678 chemotaxis protein homolog [imported] - Desulfurococ... 376 e-103
pir||F71161 probable chemotaxis protein - Pyrococcus horikoshii ... 102 3e-21
pir||H75001 methyl-accepting chemotaxis protein (tlpc) PAB1336 -... 102 3e-21
sp|P35841|DCRA_DESVH CHEMORECEPTOR PROTEIN A >gi|282156|pir||A42... 99 4e-20
pir||D82077 methyl-accepting chemotaxis protein VC2439 [imported... 97 2e-19
pir||D71155 probable methyl-accepting chemotaxis protein - Pyroc... 94 1e-18
pir||A72254 methyl-accepting chemotaxis protein - Thermotoga mar... 93 2e-18
gi|11498650 methyl-accepting chemotaxis protein (tlpC-2) [Archae... 93 3e-18
pir||F72288 methyl-accepting chemotaxis protein - Thermotoga mar... 92 6e-18
gi|11498639 methyl-accepting chemotaxis protein (tlpC-1) [Archae... 92 6e-18
pir||H72426 hypothetical protein TM0014 - Thermotoga maritima (s... 91 1e-17
emb|CAA59461.1| (X85171) methyl-accepting chemoxtaxis protein [T... 91 1e-17
dbj|BAA75352.1| (AB011838) metyl-accepting chemotaxis protein [B... 91 1e-17
dbj|BAB07634.1| (AP001520) methyl-accepting chemotaxis protein [... 91 1e-17
pir||C70174 methyl-accepting chemotaxis protein (mcp-2) homolog ... 91 1e-17
pir||E82314 methyl-accepting chemotaxis protein VC0514 [imported... 89 5e-17
pir||F71197 probable methyl-accepting chemotaxis protein - Pyroc... 89 5e-17
pir||B75158 sensory rhodopsin II transducer (htr-ii) (methyl-acc... 89 5e-17
pir||E82395 methyl-accepting chemotaxis protein VCA0974 [importe... 89 5e-17
pir||H82503 methyl-accepting chemotaxis protein VCA0068 [importe... 89 6e-17
pir||G72316 methyl-accepting chemotaxis protein - Thermotoga mar... 88 1e-16
gb|AAC27628.1| (AF076485) defective in fruiting DifA [Myxococcus... 88 1e-16
pir||E72379 methyl-accepting chemotaxis protein - Thermotoga mar... 88 1e-16
pir||S74988 methyl-accepting chemotaxis protein slr1044 - Synech... 88 1e-16
sp|P39217|TLPB_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN TLPB >g... 87 1e-16
pir||A72428 methyl-accepting chemotaxis protein - Thermotoga mar... 87 1e-16
pir||A54078 methyl-accepting chemotaxis protein mcpB - Bacillus ... 87 2e-16
emb|CAB99193.1| (AJ293587) hypothetical protein [Pseudomonas put... 87 2e-16
pir||H75006 methyl-accepting chemotaxis related protein PAB1308 ... 87 2e-16
pir||E83067 probable chemotaxis transducer PA4633 [imported] - P... 87 2e-16
pir||T44849 transducer protein car [validated] - Halobacterium s... 87 2e-16
dbj|BAB07487.1| (AP001519) methyl-accepting chemotaxis protein [... 87 2e-16
pir||A82407 methyl-accepting chemotaxis protein VCA0864 [importe... 87 2e-16
pir||E82481 methyl-accepting chemotaxis protein VCA0268 [importe... 86 3e-16
pir||E82379 methyl-accepting chemotaxis protein VCA1088 [importe... 86 3e-16
sp|P15492|HLYB_VIBCH HEMOLYSIN SECRETION PROTEIN PRECURSOR >gi|7... 86 4e-16
pir||B69896 methyl-accepting chemotaxis protein homolog yoaH - B... 86 4e-16
pir||B82486 hemolysin secretion protein HylB VCA0220 [imported] ... 86 4e-16
pir||G64532 methyl-accepting chemotaxis protein - Helicobacter p... 86 4e-16
pir||D83297 probable chemotaxis transducer PA2788 [imported] - P... 86 4e-16
pir||E81442 probable MCP-domain signal transduction protein Cj02... 85 6e-16
pir||H75002 methyl-accepting chemotaxis protein PAB1026 - Pyroco... 85 6e-16
sp|P39214|MCPA_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPA (H... 85 6e-16
gb|AAA21387.1| (L25660) accessory colonization factor [Vibrio ch... 85 7e-16
sp|P39215|MCPB_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB (H... 85 7e-16
gb|AAA82705.1| (U39068) AcfB [Vibrio cholerae] 85 7e-16
pir||E82273 accessory colonization factor AcfB VC0840 [imported]... 85 7e-16
pir||E82419 methyl-accepting chemotaxis protein VCA0773 [importe... 85 7e-16
dbj|BAB04224.1| (AP001508) methyl-accepting chemotaxis protein [... 85 7e-16
dbj|BAB04284.1| (AP001509) methyl-accepting chemotaxis protein [... 85 7e-16
pir||H82147 methyl-accepting chemotaxis protein VC1868 [imported... 85 9e-16
pir||G82490 methyl-accepting chemotaxis protein VCA0176 [importe... 85 9e-16
pir||E82431 methyl-accepting chemotaxis protein VCA0663 [importe... 85 9e-16
gb|AAG13635.1| (AF036940) putative chemotaxis protein [Ralstonia... 85 9e-16
pir||B64530 methyl-accepting chemotaxis transducer (tlpC) - Heli... 84 2e-15
pir||B71160 probable methyl-accepting chemotaxis protein - Pyroc... 84 2e-15
pir||H81324 probable MCP-domain signal transduction protein Cj11... 84 2e-15
pir||A83451 aerotaxis receptor Aer PA1561 [imported] - Pseudomon... 84 2e-15
pir||C72291 methyl-accepting chemotaxis protein - Thermotoga mar... 83 2e-15
pir||F81417 MCP-domain signal transduction protein Cj0019c [impo... 83 2e-15
pir||C83080 probable chemotaxis transducer PA4520 [imported] - P... 83 2e-15
pir||C64532 methyl-accepting chemotaxis protein (tlpA) - Helicob... 83 3e-15
pir||A81315 probable MCP-type signal transduction protein Cj1110... 83 3e-15
pir||B83469 probable chemotaxis transducer PA1423 [imported] - P... 83 3e-15
dbj|BAB07619.1| (AP001520) methyl-accepting chemotaxis protein [... 83 3e-15
pir||T44964 transducer protein car [validated] - Halobacterium s... 83 4e-15
pir||B71975 methyl-accepting chemotaxis protein (MCP) - Helicoba... 83 4e-15
pir||G83313 probable chemotaxis transducer PA2652 [imported] - P... 83 4e-15
pir||C83012 probable chemotaxis transducer PA5072 [imported] - P... 83 4e-15
sp|P39216|TLPA_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN TLPA >g... 82 5e-15
pir||S75940 methyl-accepting chemotaxis protein sll0041 - Synech... 82 5e-15
pir||F71975 methyl-accepting chemotaxis protein (MCP) - Helicoba... 82 5e-15
pir||H83445 probable chemotaxis transducer PA1608 [imported] - P... 82 5e-15
gb|AAG19270.1| (AE005023) Htr18 transducer; Htr18 [Halobacterium... 82 6e-15
sp|Q02755|MCPC_SALTY METHYL-ACCEPTING CHEMOTAXIS CITRATE TRANSDU... 82 6e-15
pir||E82222 methyl-accepting chemotaxis protein VC1248 [imported... 82 6e-15
pir||A71978 methyl-accepting chemotaxis protein (MCP) - Helicoba... 82 8e-15
pir||H81431 methyl-accepting chemotaxis signal transduction prot... 81 1e-14
pir||E81444 probable methyl-accepting chemotaxis signal transduc... 81 1e-14
pir||B81251 probable methyl-accepting chemotaxis signal transduc... 81 1e-14
pir||B82351 methyl-accepting chemotaxis protein VC0216 [imported... 81 1e-14
pir||F82174 methyl-accepting chemotaxis protein VC1643 [imported... 81 1e-14
pir||F83280 probable chemotaxis transducer PA2920 [imported] - P... 81 1e-14
gb|AAG34158.1|AF312879_1 (AF312879) methyl-accepting chemotaxis ... 81 1e-14
gb|AAC25074.1| (AF044495) MCP homolog [Agrobacterium tumefaciens] 80 2e-14
pir||H82402 methyl-accepting chemotaxis protein VCA0906 [importe... 80 2e-14
pir||F82392 methyl-accepting chemotaxis protein VCA0988 [importe... 80 2e-14
pir||F82383 methyl-accepting chemotaxis protein VCA1056 [importe... 80 2e-14
pir||E83325 probable chemotaxis transducer PA2561 [imported] - P... 80 2e-14
pir||D82393 methyl-accepting chemotaxis protein VCA0979 [importe... 80 2e-14
dbj|BAB04595.1| (AP001510) methyl-accepting chemotaxis protein [... 80 2e-14
sp|Q02929|CPS_CLOTM PUTATIVE SENSORY TRANSDUCER PROTEIN >gi|4777... 80 3e-14
pir||G36943 chemoreceptor protein dcrG - Desulfovibrio vulgaris ... 80 3e-14
sp|Q52877|YCH1_RHIME HYPOTHETICAL 57.4 KDA PROTEIN IN CHEY1 5'RE... 80 3e-14
pir||A83314 probable chemotaxis transducer PA2654 [imported] - P... 80 3e-14
dbj|BAB07622.1| (AP001520) methyl-accepting chemotaxis protein [... 80 3e-14
sp|P54576|MCPC_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPC >g... 79 4e-14
sp|Q48316|HTR3_HALSA HALOBACTERIAL TRANSDUCER PROTEIN III >gi|14... 79 4e-14
pir||A82320 methyl-accepting chemotaxis protein VC0449 [imported... 79 4e-14
pir||B82204 methyl-accepting chemotaxis protein VC1413 [imported... 79 4e-14
dbj|BAB07582.1| (AP001520) methyl-accepting chemotaxis protein [... 79 4e-14
sp|P39209|TLPC_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN TLPC >g... 79 5e-14
pir||S72163 methyl-accepting chemotaxis protein mcpA - Rhizobium... 79 5e-14
emb|CAA70726.1| (Y09534) methyl-accepting chemotaxis proteins [R... 79 5e-14
pir||E83032 probable chemotaxis transducer PA4915 [imported] - P... 79 5e-14
gb|AAG19717.1| (AE005058) Htr9 transducer; Htr9 [Halobacterium s... 79 5e-14
gb|AAG19801.1| (AE005064) Htr10 transducer; Htr10 [Halobacterium... 79 5e-14
gb|AAB69316.1| (AF012922) methyl-accepting chemotaxis protein [T... 78 7e-14
pir||H71917 methyl-accepting chemotaxis protein (MCP) - Helicoba... 78 7e-14
pir||C82314 methyl-accepting chemotaxis protein VC0512 [imported... 78 7e-14
pir||C82433 methyl-accepting chemotaxis protein VCA0658 [importe... 78 7e-14
dbj|BAA06432.1| (D30762) methyl-accepting chemotaxis protein Tl... 78 9e-14
gb|AAB50497.1| (U30319) DcrH [Desulfovibrio vulgaris] 78 9e-14
pir||T44606 transducer protein htpIV [similarity] - Halobacteriu... 78 9e-14
pir||F81297 probable MCP-type signal transduction protein Cj1506... 78 9e-14
pir||B82215 methyl-accepting chemotaxis protein VC1313 [imported... 78 9e-14
pir||E82508 methyl-accepting chemotaxis protein VCA0031 [importe... 78 9e-14
dbj|BAB05546.1| (AP001513) methyl-accepting chemotaxis protein [... 78 9e-14
sp|Q00986|MCPA_CAUCR CHEMORECEPTOR MCPA (METHYL-ACCEPTING CHEMOT... 78 1e-13
sp|P33741|HTRI_HALHA SENSORY RHODOPSIN I TRANSDUCER (HTR-I) (MET... 78 1e-13
pir||C69832 methyl-accepting chemotaxis protein homolog yhfV - B... 78 1e-13
gb|AAF61289.1|AF064528_2 (AF064528) phototransducer; methyl-acce... 77 2e-13
pir||E82189 methyl-accepting chemotaxis protein VC1535 [imported... 77 2e-13
pir||H83324 probable chemotaxis transducer PA2573 [imported] - P... 77 2e-13
gb|AAG19986.1| (AE005080) Htr5 transducer; Htr5 [Halobacterium s... 77 2e-13
gb|AAB47275.1| (U86607) 48 kDa antigen [Helicobacter pylori] 77 2e-13
pir||B69814 methyl-accepting chemotaxis protein homolog yfmS - B... 77 2e-13
gb|AAD34887.1|AF141674_1 (AF141674) putative chemotaxis chemorec... 77 2e-13
pir||JQ1475 probable methyl-accepting chemotaxis protein - Esche... 77 2e-13
gb|AAC27625.1| (AF074954) methyl-accepting chemotaxis-like prote... 77 2e-13
pir||H82379 methyl-accepting chemotaxis protein VCA1092 [importe... 77 2e-13
gb|AAG37852.1|AF298190_2 (AF298190) methyl-accepting-chemotaxis-... 77 2e-13
sp|P29486|TCPI_VIBCH TOXIN CORREGULATED PILUS BIOSYNTHESIS PROTE... 76 3e-13
sp|P05704|MCP3_ECOLI METHYL-ACCEPTING CHEMOTAXIS PROTEIN III (MC... 76 3e-13
pir||F82342 methyl-accepting chemotaxis protein VC0282 [imported... 76 3e-13
pir||D82274 toxin co-regulated pilus biosynthesis protein I VC08... 76 3e-13
pir||A82134 methyl-accepting chemotaxis protein VC1967 [imported... 76 3e-13
pir||D82218 methyl-accepting chemotaxis protein VC1289 [imported... 76 4e-13
pir||C82205 methyl-accepting chemotaxis protein VC1394 [imported... 76 4e-13
pir||G83404 probable chemotaxis transducer PA1930 [imported] - P... 76 4e-13
sp|Q48317|HTR4_HALSA HALOBACTERIAL TRANSDUCER PROTEIN IV >gi|112... 76 5e-13
gb|AAC46420.1| (AF036168) putative methyl accepting chemotaxis p... 76 5e-13
emb|CAA05367.1| (AJ002392) chemotactic receptor I [Leptospirillu... 76 5e-13
gi|10954934 Putative mcpA [Agrobacterium tumefaciens] >gi|649828... 76 5e-13
pir||C81389 probable MCP-type signal transduction protein Cj0448... 76 5e-13
pir||H82143 methyl-accepting chemotaxis protein VC1898 [imported... 76 5e-13
pir||S75285 methyl-accepting chemotaxis protein homolog sll1294 ... 75 6e-13
pir||D75590 methyl-accepting chemotaxis protein - Deinococcus ra... 75 6e-13
gb|AAG18922.1| (AE004994) Htr14 transducer; Htr14 [Halobacterium... 75 6e-13
pir||QREBDT aspartate chemoreceptor protein - Salmonella typhimu... 75 8e-13
pir||A29053 aspartate chemoreceptor protein - Salmonella typhimu... 75 8e-13
sp|P02941|MCP2_SALTY METHYL-ACCEPTING CHEMOTAXIS PROTEIN II (MCP... 75 8e-13
sp|P71410|HTR2_HALSA SENSORY RHODOPSIN II TRANSDUCER (HTR-II) (M... 75 8e-13
gb|AAD13223.1| (AF100302) methyl-accepting chemotaxis protein [P... 75 8e-13
gb|AAG19989.1| (AE005080) Htr2 transducer; Htr2 [Halobacterium s... 75 8e-13
sp|P43500|FRZC_MYXXA FRZCD PROTEIN (FRIZZY AGGREGATION PROTEIN F... 75 1e-12
pir||T44973 transducer protein htpIII [similarity] - Halobacteri... 75 1e-12
gb|AAD13198.1| (AF096317) putative methyl-accepting chemotaxis p... 75 1e-12
pir||G82618 pilus biogenesis protein XF1953 [imported] - Xylella... 75 1e-12
pir||F82382 methyl-accepting chemotaxis protein VCA1069 [importe... 75 1e-12
gb|AAA23567.1| (M13463) sensory transducer protein [Escherichia ... 74 1e-12
pir||G82401 methyl-accepting chemotaxis protein VCA0923 [importe... 74 1e-12
pir||H83106 chemotactic transducer PctC PA4307 [imported] - Pseu... 74 1e-12
gb|AAG19428.1| (AE005036) Htr13 transducer; Htr13 [Halobacterium... 74 1e-12
pir||B83107 chemotactic transducer PctA PA4309 [imported] - Pseu... 74 2e-12
gb|AAB17882.1| (U75437) transducer HtC protein [Halobacterium sa... 74 2e-12
pir||F70028 transmembrane receptor taxis protein homolog yvaQ - ... 74 2e-12
sp|P55652|Y4SI_RHISN PROBABLE CHEMORECEPTOR Y4SI (METHYL-ACCEPTI... 73 2e-12
sp|P07018|MCP4_ECOLI METHYL-ACCEPTING CHEMOTAXIS PROTEIN IV (MCP... 73 2e-12
gb|AAG34156.1|AF312878_1 (AF312878) methyl-accepting chemotaxis ... 73 2e-12
gb|AAA23566.1| (M13463) methyl-accepting chemotaxis protein II [... 73 3e-12
sp|Q48318|HTR5_HALSA HALOBACTERIAL TRANSDUCER PROTEIN V >gi|1127... 73 3e-12
sp|P07017|MCP2_ECOLI METHYL-ACCEPTING CHEMOTAXIS PROTEIN II (MCP... 73 3e-12
gb|AAC04467.1| (U33210) methyl accepting chemotaxis homolog [Tre... 73 3e-12
pir||T03424 probable methylation accepting chemotaxis protein mc... 73 3e-12
gb|AAG19968.1| (AE005078) Htr17 transducer; Htr17 [Halobacterium... 73 3e-12
emb|CAA23676.1| (V00373) serine chemoreceptor [Escherichia coli]... 73 4e-12
sp|P02942|MCP1_ECOLI METHYL-ACCEPTING CHEMOTAXIS PROTEIN I (MCP-... 73 4e-12
sp|P42258|HTR2_HALVA SENSORY RHODOPSIN II TRANSDUCER (HTR-II) (M... 73 4e-12
pir||T44989 transducer protein trII [imported] - Haloarcula vall... 73 4e-12
pir||C82206 methyl-accepting chemotaxis protein VC1403 [imported... 73 4e-12
pir||F82148 methyl-accepting chemotaxis protein VC1859 [imported... 73 4e-12
pir||A82513 methyl-accepting chemotaxis protein VCA0008 [importe... 72 5e-12
pir||C83440 probable chemotaxis transducer PA1646 [imported] - P... 72 5e-12
gb|AAC46419.1| (U81828) methylation accepting chemotaxis protein... 72 7e-12
gi|10954729 hypothetical chemoreceptor gene~similar to orf2 gene... 72 7e-12
gb|AAG34155.1|AF312877_1 (AF312877) methyl-accepting chemotaxis ... 72 7e-12
pir||S56581 methyl-accepting chemotaxis protein I - Escherichia ... 71 9e-12
pir||T44938 transducer protein htpV [similarity] - Halobacterium... 71 9e-12
dbj|BAA23413.1| (D86947) chemotactic transducer [Pseudomonas aer... 71 9e-12
pir||T44258 transducer protein htrXIII [similarity] - Halobacter... 71 9e-12
pir||C83107 chemotactic transducer PctB PA4310 [imported] - Pseu... 71 9e-12
pdb|1QU7|A Chain A, Four Helical-Bundle Structure Of The Cytopla... 71 9e-12
gb|AAG19122.1| (AE005010) Htr16 transducer; Htr16 [Halobacterium... 71 1e-11
gb|AAD13638.1| (U84257) methyl-accepting chemotaxis protein B [T... 71 2e-11
sp|P21822|MCPS_ENTAE METHYL-ACCEPTING CHEMOTAXIS SERINE TRANSDUC... 70 2e-11
pir||B82203 methyl-accepting chemotaxis protein VC1405 [imported... 70 2e-11
pir||F81369 probable MCP-domain signal transduction protein Cj09... 70 3e-11
emb|CAB46683.1| (AJ243600) MCPG protein [Rhodobacter sphaeroides] 69 4e-11
gi|10954717 hypothetical chemoreceptor gene~similar to orf2 gene... 69 4e-11
>pir||H75027 sy v-atpase proteolipid PAB1189 - Pyrococcus abyssi (strain Orsay)
>gi|5459176|emb|CAB50662.1| (AJ248288) SY V-ATPASE
PROTEOLIPID [Pyrococcus abyssi]
Length = 258
Score = 487 bits (1240), Expect = e-137
Identities = 258/258 (100%), Positives = 258/258 (100%)
Query: 1 MNIRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMK 60
MNIRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMK
Sbjct: 1 MNIRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMK 60
Query: 61 ELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAAR 120
ELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAAR
Sbjct: 61 ELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAAR 120
Query: 121 AGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEIL 180
AGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEIL
Sbjct: 121 AGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEIL 180
Query: 181 GRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLA 240
GRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLA
Sbjct: 181 GRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLA 240
Query: 241 SEYSRSGGDSNGKKALLR 258
SEYSRSGGDSNGKKALLR
Sbjct: 241 SEYSRSGGDSNGKKALLR 258
>pir||B71213 probable chemoreceptor protein - Pyrococcus horikoshii
>gi|3258414|dbj|BAA31097.1| (AP000007) 261aa long
hypothetical chemoreceptor protein [Pyrococcus
horikoshii]
Length = 261
Score = 404 bits (1027), Expect = e-112
Identities = 205/258 (79%), Positives = 242/258 (93%), Gaps = 1/258 (0%)
Query: 1 MNIRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMK 60
M+I++LEK S ALS SLR++VS KE+SKI++ELAEEISGKFMENNTLILDNI+KLSEIM
Sbjct: 4 MDIKSLEKTSTALSQSLRISVSGKEASKIINELAEEISGKFMENNTLILDNIEKLSEIMS 63
Query: 61 ELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAAR 120
ELD+FQREFLPFFQRLE F+ EFNTLV++LE +SKISDSIASVAKQTNLVALNASIEAAR
Sbjct: 64 ELDRFQREFLPFFQRLEVFSREFNTLVEHLESVSKISDSIASVAKQTNLVALNASIEAAR 123
Query: 121 AGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEIL 180
AGEAGRGFAVVADEIRRMAVQTMNLA+EIKEFNSKVMDQLD+LR+ L +MDRIREGTEIL
Sbjct: 124 AGEAGRGFAVVADEIRRMAVQTMNLAREIKEFNSKVMDQLDSLREVLGIMDRIREGTEIL 183
Query: 181 GRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLA 240
G+DI++IV+I+N+L++ISKEQEQFINDIK LKGIALA+ KF+ELQ++YNK+LASLLR++A
Sbjct: 184 GKDIRVIVEITNILSEISKEQEQFINDIKGLKGIALAISKFAELQEKYNKDLASLLRIMA 243
Query: 241 SEYSR-SGGDSNGKKALL 257
SEYS+ +GG NG+K +L
Sbjct: 244 SEYSKEAGGGKNGRKGIL 261
>pir||T44678 chemotaxis protein homolog [imported] - Desulfurococcus sp.
(strain SY) >gi|2104730|gb|AAB64420.1| (U96487) ORF2
[Desulfurococcus sp. SY]
Length = 251
Score = 376 bits (956), Expect = e-103
Identities = 184/249 (73%), Positives = 229/249 (91%)
Query: 1 MNIRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMK 60
MN+R++EKAS AL+ S+R+ SS+ESSKI+ ELAE+ISG+F+ENN +I++NI+KLS++MK
Sbjct: 1 MNVRSIEKASNALAQSVRIKTSSRESSKIIDELAEQISGQFLENNMVIIENIEKLSQVMK 60
Query: 61 ELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAAR 120
EL++FQ EFLPFFQR E FA EFNTLV+NLEY+S+ISDSIASVAKQTNLVALNASIEAAR
Sbjct: 61 ELERFQEEFLPFFQRFEVFAKEFNTLVENLEYVSRISDSIASVAKQTNLVALNASIEAAR 120
Query: 121 AGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEIL 180
AGEAGRGFAVVADEIR+MAVQTMNLAKEIK+FN++VM QL+ LRDAL VMDRI+EGTEIL
Sbjct: 121 AGEAGRGFAVVADEIRKMAVQTMNLAKEIKDFNTRVMGQLETLRDALAVMDRIKEGTEIL 180
Query: 181 GRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLA 240
GRDI+ +V+IS+VL++IS+EQE+ +NDIKRLKGIALAL KF+++QD+YNKELASLLR++
Sbjct: 181 GRDIEAMVEISSVLDEISREQEEIVNDIKRLKGIALALRKFADMQDKYNKELASLLRMMV 240
Query: 241 SEYSRSGGD 249
SEY++ D
Sbjct: 241 SEYAKEQKD 249
>pir||F71161 probable chemotaxis protein - Pyrococcus horikoshii
>gi|3256896|dbj|BAA29579.1| (AP000002) 739aa long
hypothetical chemotaxis protein [Pyrococcus horikoshii]
Length = 739
Score = 102 bits (253), Expect = 3e-21
Identities = 71/232 (30%), Positives = 123/232 (52%), Gaps = 28/232 (12%)
Query: 13 LSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPF 72
++ +RL + E S + EE G E ++ + QK + +K ++ Q
Sbjct: 485 ITEGMRLVAQTSEESV---KAMEEFEGAVSEVVSIANEGSQKGDDALKRIEDIQH----M 537
Query: 73 FQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVA 132
R+E ++ + + +N+E I+ + I S+A+QTNL+ALNA+IEAARAGEAGRGFAVVA
Sbjct: 538 MSRIEETVSKVSEMSRNIEEITNV---ITSIAEQTNLLALNAAIEAARAGEAGRGFAVVA 594
Query: 133 DEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISN 192
EIR++A ++ A IK K+ D++ +A K EG ++G+ + + D
Sbjct: 595 QEIRKLAEESKQAADNIKSIIDKITDEIKEAVEATK------EGVNVIGQSSETLRDTIG 648
Query: 193 VLNDIS---KEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLAS 241
L +I+ +E + ++++K ++ + Q+ +K L +L L AS
Sbjct: 649 YLANIATLLQETSERMSEVK---------DQIVKTQEEVDKSLRALENLAAS 691
>pir||H75001 methyl-accepting chemotaxis protein (tlpc) PAB1336 - Pyrococcus
abyssi (strain Orsay) >gi|5458968|emb|CAB50454.1|
(AJ248288) methyl-accepting chemotaxis protein (tlpC)
[Pyrococcus abyssi]
Length = 739
Score = 102 bits (253), Expect = 3e-21
Identities = 73/229 (31%), Positives = 117/229 (50%), Gaps = 22/229 (9%)
Query: 13 LSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPF 72
++ +RL + E S EE SG E ++ + QK E +K ++ Q
Sbjct: 485 ITDGMRLVAQTSEESV---RAMEEFSGAVTEVVSIANEGSQKGDEALKRIEDIQH----M 537
Query: 73 FQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVA 132
R+E ++ + +N+E I+ + I S+A+QTNL+ALNA+IEAARAGEAGRGFAVVA
Sbjct: 538 MSRIEETVSKVAEMSRNIEEITNV---ITSIAEQTNLLALNAAIEAARAGEAGRGFAVVA 594
Query: 133 DEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISN 192
EIR++A ++ A IK K+ D++ +A K EG ++G + + D
Sbjct: 595 QEIRKLAEESKQAADNIKSIIDKITDEIKEAVEATK------EGVSVIGESSETLRDTIG 648
Query: 193 VLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLAS 241
L +I+ ++ + +K E+ Q+ +K L +L L AS
Sbjct: 649 YLANIATLLQETSERMTTVK------EQIVRTQEEVDKALRALENLAAS 691
>sp|P35841|DCRA_DESVH CHEMORECEPTOR PROTEIN A >gi|282156|pir||A42275 chemoreceptor
protein A dcrA - Desulfovibrio vulgaris
>gi|145114|gb|AAA23379.1| (M81168) chemoreceptor protein
A [Desulfovibrio vulgaris]
Length = 668
Score = 99.1 bits (243), Expect = 4e-20
Identities = 72/248 (29%), Positives = 125/248 (50%), Gaps = 19/248 (7%)
Query: 9 ASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQRE 68
A+ A S + ++ + +E + V+E+A S + + D + E+ RE
Sbjct: 419 ATEAASETTQVATAMEEMNVTVTEVARNAS-----STAEMADCQWRAQSGGTEMANTVRE 473
Query: 69 FLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGF 128
QR E A + L + + I ++ + I +A QTNL+ALNA+IEAARAG+AGRGF
Sbjct: 474 TRQVAQRTEDLAESLHELARRADNIGRVIEVINEIADQTNLLALNAAIEAARAGDAGRGF 533
Query: 129 AVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIV 188
A+VADE+R++A +TM +E+++ + + DA++VM R+ E+ +
Sbjct: 534 ALVADEVRKLAEKTMVATREVEQAIAAIQ---QGSNDAVEVMTETRQQVEVTAGKAE--- 587
Query: 189 DISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLASEYSRSGG 248
D VL+ I E + ++ IA A E+ S D N+ + + ++ + +
Sbjct: 588 DTGKVLSGIVGRAESIAD---MVRNIATASEQQSSTSDEINRNVTRI-----NDLTEASR 639
Query: 249 DSNGKKAL 256
D GK+A+
Sbjct: 640 DGCGKQAM 647
>pir||D82077 methyl-accepting chemotaxis protein VC2439 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9657014|gb|AAF95581.1| (AE004313) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 433
Score = 96.7 bits (237), Expect = 2e-19
Identities = 62/197 (31%), Positives = 108/197 (54%), Gaps = 18/197 (9%)
Query: 6 LEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKF 65
+++ + A+S + E ++ S L E S + + I K+SE+ K++
Sbjct: 190 IDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDIS-- 247
Query: 66 QREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAG 125
+ A N + + + IS + +I S+++QTNL+ALNA+IEAARAGEAG
Sbjct: 248 ------------SSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAG 295
Query: 126 RGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDAL-KVMDRIREGTEIL---G 181
RGFAVVADE+R +A +T N EI+E S++ ++ + + K + + +G E++ G
Sbjct: 296 RGFAVVADEVRNLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAG 355
Query: 182 RDIQIIVDISNVLNDIS 198
++ IV+ +LND++
Sbjct: 356 SELDGIVNQVQLLNDMN 372
>pir||D71155 probable methyl-accepting chemotaxis protein - Pyrococcus
horikoshii >gi|3256846|dbj|BAA29529.1| (AP000002) 428aa
long hypothetical methyl-accepting chemotaxis protein
[Pyrococcus horikoshii]
Length = 428
Score = 94.0 bits (230), Expect = 1e-18
Identities = 70/260 (26%), Positives = 133/260 (50%), Gaps = 45/260 (17%)
Query: 14 SHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFF 73
+H+ + + ++ ++ V+++AE I+ E +NI K++E M+ ++ +E +
Sbjct: 122 NHAKVMKDNIEQIAEAVAQVAEAINQVSAEAQRE-QENISKMTETMRYINDISKETVSTM 180
Query: 74 QRLE---------------------TFANEFNTLVQNLEY-----------ISKISDSIA 101
+ E T E + ++Q +E I I++ I+
Sbjct: 181 EEFEASMREMAQLAKEGGEKGRMAATQIEEISRMMQMIEETVRGVADMGKNIENITNVIS 240
Query: 102 SVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLD 161
S+A+QTNL+ALNA+IEAARAGEAG+GFAVVADEIR++A ++ A++I+E ++ D++
Sbjct: 241 SIAEQTNLLALNAAIEAARAGEAGKGFAVVADEIRKLAEESKKAAEDIRELIKQIGDKIS 300
Query: 162 ALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKF 221
+ ++ ++G E++G ++I + N L +++ E+ L+ EK
Sbjct: 301 ------ESVEVTKQGAEVVGTSTEVIKESVNYLTQVAEMMEEMEAKASELR------EKV 348
Query: 222 SELQDRYNKELASLLRLLAS 241
+ ++ + L L L AS
Sbjct: 349 IQEGEKIEEGLKFLENLAAS 368
>pir||A72254 methyl-accepting chemotaxis protein - Thermotoga maritima (strain
MSB8) >gi|4981993|gb|AAD36498.1|AE001795_1 (AE001795)
methyl-accepting chemotaxis protein [Thermotoga
maritima]
Length = 566
Score = 93.2 bits (228), Expect = 2e-18
Identities = 68/234 (29%), Positives = 121/234 (51%), Gaps = 40/234 (17%)
Query: 14 SHSLRLTVSSKESSKIVSELAEEISG--KFMENNTLILDNIQKLSEIMKELDKFQREFLP 71
S S ++ +S+ SK++ E++E F N +L+ K E + E +
Sbjct: 314 SGSEEVSANSQNISKLIQEISENADNIADFARNGQRVLEEAVKKVEDVSENSR------- 366
Query: 72 FFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVV 131
ET A+ + + ++ I +I +I S+A+QTNL+ALNA+IEAARAGEAGRGFAVV
Sbjct: 367 -----ET-ADVVSNVTESARNIEEIVRTIQSIAEQTNLLALNAAIEAARAGEAGRGFAVV 420
Query: 132 ADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREG----TEILGRDIQII 187
ADEIR++A ++ +EI + +++ IREG E+ ++++I
Sbjct: 421 ADEIRKLAEESQKATEEISQ-----------------ILENIREGVERTNEMSKKNVEIT 463
Query: 188 VDISNVLNDISKEQEQFINDIK----RLKGIALALEKFSELQDRYNKELASLLR 237
D ++ + + Q + I+ R++GIA + ++ S + + L ++ +
Sbjct: 464 KDARRLVEESYESFNQIVTRIEDLAARIEGIAASAQELSAASEEMSSALDAVAK 517
>gi|11498650 methyl-accepting chemotaxis protein (tlpC-2) [Archaeoglobus
fulgidus] >gi|7483868|pir||E69380 methyl-accepting
chemotaxis protein (tlpC-2) homolog - Archaeoglobus
fulgidus >gi|2649548|gb|AAB90198.1| (AE001031)
methyl-accepting chemotaxis protein (tlpC-2)
[Archaeoglobus fulgidus]
Length = 834
Score = 92.8 bits (227), Expect = 3e-18
Identities = 61/184 (33%), Positives = 103/184 (55%), Gaps = 3/184 (1%)
Query: 18 RLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLP-FFQRL 76
RL +S K E+ ++++ + EN+ D + +E+ K+ E + Q +
Sbjct: 550 RLANASTLDLKAAEEIFKDLTAR-AENSAKFADEASQNAEMAKKEGVKALEIIKSIVQEV 608
Query: 77 ETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIR 136
E + TL Q + I K+++ I S+A QTNL+ALNA+IEAARAGE GRGFAVVADE+R
Sbjct: 609 ENASKVVETLEQAVRNIGKVTERIKSIADQTNLLALNAAIEAARAGEHGRGFAVVADEVR 668
Query: 137 RMAVQTMNLAKEIKEFNSKVMDQLDALRDAL-KVMDRIREGTEILGRDIQIIVDISNVLN 195
++A ++ +EI E V ++ + +A KV + +G+E + + +I+ +N
Sbjct: 669 KLAEESRKSTEEIDEIVRNVQEETRKVIEATNKVKESSLQGSEGIENALMKAGEIAEAVN 728
Query: 196 DISK 199
I++
Sbjct: 729 RINE 732
>pir||F72288 methyl-accepting chemotaxis protein - Thermotoga maritima (strain
MSB8) >gi|4981694|gb|AAD36222.1|AE001772_1 (AE001772)
methyl-accepting chemotaxis protein [Thermotoga
maritima]
Length = 539
Score = 92.1 bits (225), Expect = 6e-18
Identities = 67/235 (28%), Positives = 123/235 (51%), Gaps = 12/235 (5%)
Query: 5 TLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDK 64
+L K + S +L +S E ++ + + +E+ + + ++K +E ++E+ +
Sbjct: 270 SLNKEADENSATLEEFTASIEELSSTADSNSKSAQAMLESTQRVHEQVEKSTERIREITE 329
Query: 65 FQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA 124
+ E N L+ E I+ I D+I S+A+QTNL+ALNA+IEAARAGEA
Sbjct: 330 KAHSTR---EMSENTKQALNRLLSMAENINSIVDTINSIAEQTNLLALNAAIEAARAGEA 386
Query: 125 GRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDI 184
GRGFAVVADEIR++A ++ ++I E K+ D+++ ++ K+++ E +
Sbjct: 387 GRGFAVVADEIRKLAEESKAATQQIGEILGKLRDEIN---NSSKIVESTASAIEETASLV 443
Query: 185 QIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLL 239
+ I D+ + I+ E Q R++ +A + ++ S + + + L LL
Sbjct: 444 ESIKDVFESIR-IAMEDVQ-----SRVESVAASTQEQSASLEELSAGVTRLTELL 492
>gi|11498639 methyl-accepting chemotaxis protein (tlpC-1) [Archaeoglobus
fulgidus] >gi|7483867|pir||B69379 methyl-accepting
chemotaxis protein (tlpC-1) homolog - Archaeoglobus
fulgidus >gi|2649560|gb|AAB90209.1| (AE001032)
methyl-accepting chemotaxis protein (tlpC-1)
[Archaeoglobus fulgidus]
Length = 677
Score = 92.1 bits (225), Expect = 6e-18
Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 1/182 (0%)
Query: 18 RLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLE 77
RL +S K E+ E++ K E+N + ++ +E + Q +E
Sbjct: 393 RLANASTLDLKAAEEIFRELAAKADESNRQVEAAAERSRIAEQEGGRALEIIKSIVQEVE 452
Query: 78 TFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRR 137
+ TL Q + I K+++ I S+A QTNL+ALNA+IEAARAGE GRGFAVVADE+R+
Sbjct: 453 NASKVVETLEQAVRNIGKVTERIKSIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRK 512
Query: 138 MAVQTMNLAKEIKEFNSKVMDQLDALRDAL-KVMDRIREGTEILGRDIQIIVDISNVLND 196
+A ++ +EI E V ++ + +A KV + +G+E + I+ +I +N
Sbjct: 513 LAEESRKSTEEIDEIVRNVQEETRKVIEATNKVKESSLQGSEGIEAAIKQAGEILGAINR 572
Query: 197 IS 198
I+
Sbjct: 573 IN 574
>pir||H72426 hypothetical protein TM0014 - Thermotoga maritima (strain MSB8)
>gi|4980498|gb|AAD35108.1|AE001690_2 (AE001690)
methyl-accepting chemotaxis protein, putative
[Thermotoga maritima]
Length = 278
Score = 91.3 bits (223), Expect = 1e-17
Identities = 60/220 (27%), Positives = 122/220 (55%), Gaps = 20/220 (9%)
Query: 24 KESSKIVSELAEEISGKFMENN---TLILDNIQKLSE-IMKELDKFQREFLPFFQRLETF 79
KE ++ L +E+ G F + ++ +++K+SE IM+EL K +R++
Sbjct: 46 KERFVNLNRLFQELVGDFQAKSDQLVSVIQDMEKISENIMEELKKSGTNVDQIVERVKEA 105
Query: 80 ANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMA 139
+++ ++N+ I K+ +I +A++TN++ALNA+IEAARAGEAG+GF +VA+E++ ++
Sbjct: 106 SSQIGETLENIRSIEKLIQNIMRIARETNILALNATIEAARAGEAGKGFMIVANEVQNLS 165
Query: 140 VQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISK 199
+T + K+I E K + L++ + +L+ ++ + E +G+ +Q +V
Sbjct: 166 NETNEVTKQIVE---KAREILESSQRSLENLEFMANLFETVGKTLQNMVRFME------- 215
Query: 200 EQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLL 239
N++K L+ + +L+ E + E+ S ++L
Sbjct: 216 ------NNVKLLQEVRNSLDTSKESLSEKSAEIDSATKVL 249
>emb|CAA59461.1| (X85171) methyl-accepting chemoxtaxis protein [Thermotoga maritima]
Length = 278
Score = 91.3 bits (223), Expect = 1e-17
Identities = 60/220 (27%), Positives = 122/220 (55%), Gaps = 20/220 (9%)
Query: 24 KESSKIVSELAEEISGKFMENN---TLILDNIQKLSE-IMKELDKFQREFLPFFQRLETF 79
KE ++ L +E+ G F + ++ +++K+SE IM+EL K +R++
Sbjct: 46 KERFVNLNRLFQELVGDFQAKSDQLVSVIQDMEKISENIMEELKKSGTNVDQIVERVKEA 105
Query: 80 ANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMA 139
+++ ++N+ I K+ +I +A++TN++ALNA+IEAARAGEAG+GF +VA+E++ ++
Sbjct: 106 SSQIGETLENIRSIEKLIQNIMRIARETNILALNATIEAARAGEAGKGFMIVANEVQNLS 165
Query: 140 VQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISK 199
+T + K+I E K + L++ + +L+ ++ + E +G+ +Q +V
Sbjct: 166 NETNEVTKQIVE---KAREILESSQRSLENLEFMANLFETVGKTLQNMVRFME------- 215
Query: 200 EQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLL 239
N++K L+ + +L+ E + E+ S ++L
Sbjct: 216 ------NNVKLLQEVRNSLDTSKESLSEKSAEIDSATKVL 249
>dbj|BAA75352.1| (AB011838) metyl-accepting chemotaxis protein [Bacillus halodurans]
Length = 667
Score = 90.9 bits (222), Expect = 1e-17
Identities = 59/199 (29%), Positives = 104/199 (51%), Gaps = 22/199 (11%)
Query: 5 TLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDK 64
+LE+ S ++ +V ES+ E A+E G+ +ENN ++ I + ++ K
Sbjct: 416 SLEEVSSSVQQIAEASVQITESANSTIEKAKE-GGQSVENNVETMNKIHESVTDSVQITK 474
Query: 65 FQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA 124
L + + I+ I D I S+A+QTNL+ALNA+IEAARAGE
Sbjct: 475 M--------------------LAERSKEINNILDVITSIAEQTNLLALNAAIEAARAGEH 514
Query: 125 GRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALK-VMDRIREGTEILGRD 183
G+GFAVVADE+R++A + + +++I E ++ ++D A+ VM+ +++G +
Sbjct: 515 GKGFAVVADEVRKLAESSQHSSQQISEIVVEIQKEMDRTSTAMNGVMEEVKDGLTVANET 574
Query: 184 IQIIVDISNVLNDISKEQE 202
+I N ++++ E
Sbjct: 575 KTHFQEIIQSTNQVAEQIE 593
>dbj|BAB07634.1| (AP001520) methyl-accepting chemotaxis protein [Bacillus
halodurans]
Length = 667
Score = 90.9 bits (222), Expect = 1e-17
Identities = 59/199 (29%), Positives = 104/199 (51%), Gaps = 22/199 (11%)
Query: 5 TLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDK 64
+LE+ S ++ +V ES+ E A+E G+ +ENN ++ I + ++ K
Sbjct: 416 SLEEVSSSVQQIAEASVQITESANSTIEKAKE-GGQSVENNVETMNKIHESVTDSVQITK 474
Query: 65 FQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA 124
L + + I+ I D I S+A+QTNL+ALNA+IEAARAGE
Sbjct: 475 M--------------------LAERSKEINNILDVITSIAEQTNLLALNAAIEAARAGEH 514
Query: 125 GRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALK-VMDRIREGTEILGRD 183
G+GFAVVADE+R++A + + +++I E ++ ++D A+ VM+ +++G +
Sbjct: 515 GKGFAVVADEVRKLAESSQHSSQQISEIVVEIQKEMDRTSTAMNGVMEEVKDGLTVANET 574
Query: 184 IQIIVDISNVLNDISKEQE 202
+I N ++++ E
Sbjct: 575 KTHFQEIIQSTNQVAEQIE 593
>pir||C70174 methyl-accepting chemotaxis protein (mcp-2) homolog - Lyme disease
spirochete >gi|2688522|gb|AAC66955.1| (AE001161)
methyl-accepting chemotaxis protein (mcp-2) [Borrelia
burgdorferi]
Length = 715
Score = 90.9 bits (222), Expect = 1e-17
Identities = 61/238 (25%), Positives = 127/238 (52%), Gaps = 11/238 (4%)
Query: 3 IRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKEL 62
I +L K +L +S+ +S E S S EE+ G I + QK ++ +EL
Sbjct: 436 IESLSKNISSLDNSIETQAASVEQS---SSAIEEMIGGIQS----ITEITQKAAKSTEEL 488
Query: 63 DKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAG 122
+F + ++ E + + +N + + + I+S+A QTNL+++NA+IEA+ AG
Sbjct: 489 KRFSDDGR---KKQEEVITQIKEIFKNSTRLQEANSLISSIASQTNLLSMNAAIEASHAG 545
Query: 123 EAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDR-IREGTEILG 181
EAG+GFA+VA+EI+ +A Q + ++ + +++MD + + ++ ++ + + +
Sbjct: 546 EAGKGFAIVAEEIKDLAEQVTSQSESVASSINEIMDSITKTVNTSELTNKAFNQIFDSIN 605
Query: 182 RDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLL 239
+Q+I +I++ + + S ++ + + ++ I ++ S R NKE+ S ++LL
Sbjct: 606 LVVQVIEEINHTMQEQSIGSQEILKALNTMREITYEVKIGSNDMFRGNKEIISTIKLL 663
>pir||E82314 methyl-accepting chemotaxis protein VC0514 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9654941|gb|AAF93684.1| (AE004137) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 626
Score = 88.9 bits (217), Expect = 5e-17
Identities = 71/258 (27%), Positives = 130/258 (49%), Gaps = 34/258 (13%)
Query: 3 IRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLI---LDNIQKLSEIM 59
++ LE+ + A++ S+++ ++ A+E +E ++++ D IQ+LS
Sbjct: 380 LQELEQLATAMNEMAMTASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSI-- 437
Query: 60 KELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAA 119
R+ + + LV+ + I + D I +A QTNL+ALNA+IEAA
Sbjct: 438 ---------------RIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAAIEAA 482
Query: 120 RAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEI 179
RAGE+GRGFAVVADE+R +A +T +I E ++ L++ K + R + +++
Sbjct: 483 RAGESGRGFAVVADEVRTLAQRTQQSTMQISEI-------IEQLQEGAKNVSRSMDESKL 535
Query: 180 LGRDIQIIVDISNVLNDISKEQEQFINDIKRLK-GIALALEKFSELQDRYNKELASLLRL 238
+ I+V+ +N +N+ +Q I+ I + IA A E+ S + + N ++ L
Sbjct: 536 ---ETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDL 592
Query: 239 ---LASEYSRSGGDSNGK 253
L+ S +G + N +
Sbjct: 593 SIKLSEAASNAGTEMNAQ 610
>pir||F71197 probable methyl-accepting chemotaxis protein - Pyrococcus
horikoshii >gi|3258290|dbj|BAA30973.1| (AP000007) 507aa
long hypothetical methyl-accepting chemotaxis protein
[Pyrococcus horikoshii]
Length = 507
Score = 88.9 bits (217), Expect = 5e-17
Identities = 66/241 (27%), Positives = 121/241 (49%), Gaps = 43/241 (17%)
Query: 23 SKESSKIVSELAEEI------SGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRL 76
S E ++ V+++AE I + + EN T I+D + +++ + + EF +
Sbjct: 217 SSEITEAVNQVAEAIQQVSTEAQRQQENITQIMDGMNLTADVTQRTVEAMEEFSSVVNEV 276
Query: 77 ETFANE---------------------FNTLVQNLEYISK----ISDSIASVAKQTNLVA 111
+ A E + VQ + +SK I ++IA +A+QTNL+A
Sbjct: 277 ISIAREGKEKGEKAISQVGDIQNAMRVISQAVQEVAEMSKNVGEIINAIADIAEQTNLLA 336
Query: 112 LNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLD-ALRDALKVM 170
LNA+IEAARAGE GRGFAVVA E+R +A ++ A+ I+E +++ D+++ A+ + K +
Sbjct: 337 LNAAIEAARAGELGRGFAVVAQEVRNLAEESKEAAERIREILNQIQDKVEKAVEETEKGV 396
Query: 171 DRIREGTEILGRDIQIIVDISNVLNDI-----------SKEQEQFINDIKRLKGIALALE 219
+ + L + ++++ +L+D+ + QE N K L+ +A + E
Sbjct: 397 KIVDNSVDFLRETVGYLMNVGELLDDVEDKLQAVKSELANTQEHVENAKKALENLAASAE 456
Query: 220 K 220
+
Sbjct: 457 E 457
>pir||B75158 sensory rhodopsin II transducer (htr-ii) (methyl-accepting
phototaxis protein ii) (mpp-ii) PAB2066 - Pyrococcus
abyssi (strain Orsay) >gi|5457855|emb|CAB49345.1|
(AJ248284) SENSORY RHODOPSIN II TRANSDUCER (HTR-II)
(METHYL-ACCEPTING PHOTOTAXIS PROTEIN II) (MPP-II)
[Pyrococcus abyssi]
Length = 501
Score = 88.9 bits (217), Expect = 5e-17
Identities = 54/222 (24%), Positives = 116/222 (51%), Gaps = 19/222 (8%)
Query: 6 LEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKF 65
L + S +S ++ + + + ++ +E + ME + D Q+ + M+E
Sbjct: 210 LTRISSEISEAINQVAEAIQQVSVEAQRQQENITEIMEGMNITADVTQRTVDAMEEFSGV 269
Query: 66 QREFLPF-----------FQRLETFANEFNTLVQNLEYISKIS-------DSIASVAKQT 107
E L ++E + + Q ++ ++++S ++IA +A+QT
Sbjct: 270 VNEVLSIAREGKDKGEKAISQVEDIQDAMKVIRQAVQEVAEMSKNVGDIINAIADIAEQT 329
Query: 108 NLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLD-ALRDA 166
NL+ALNA+IEAARAGE GRGFAVVA E+R +A ++ A++I+ +++ ++++ A+ +
Sbjct: 330 NLLALNAAIEAARAGELGRGFAVVAQEVRNLAEESKEAAEKIRGILNEIQEKVEKAVEET 389
Query: 167 LKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDI 208
K + + + + L + +++I +L+D+ + + N++
Sbjct: 390 EKGVKVVDDSVDFLKETVGYLMNIGELLDDVESKLQDIKNEL 431
>pir||E82395 methyl-accepting chemotaxis protein VCA0974 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658413|gb|AAF96870.1| (AE004423) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 561
Score = 88.9 bits (217), Expect = 5e-17
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 25/219 (11%)
Query: 48 ILDNIQKLSEIMKELDKFQREFLPFF----QRLETFANEFNT-------LVQNLEYISKI 96
+ DN +E D+ + L F Q E A N L + E IS +
Sbjct: 335 VSDNASSADATAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNV 394
Query: 97 SDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKV 156
+ I V+ QTNL+ALNA+IEAARAGE+GRGFAVVADE+R +A +T KEI+ ++
Sbjct: 395 IEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEEL 454
Query: 157 MDQLDALRDALKV-MDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIA 215
Q D+++ +D + + + + ++ I+ ++DI+ Q +A
Sbjct: 455 QTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQ----------VA 504
Query: 216 LALEKFSELQDRYNKELASLLRLL---ASEYSRSGGDSN 251
A E+ S + N+ ++++ L+ + S+S SN
Sbjct: 505 TAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASN 543
>pir||H82503 methyl-accepting chemotaxis protein VCA0068 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9657452|gb|AAF95982.1| (AE004350) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 547
Score = 88.5 bits (216), Expect = 6e-17
Identities = 55/169 (32%), Positives = 85/169 (49%), Gaps = 11/169 (6%)
Query: 53 QKLSEIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVAL 112
Q S+ ++ ++ R +L A N L + E I +++ I S+++QTNL+AL
Sbjct: 337 QLASQSLRMFEESHRATAKMADQLREAAQVVNQLKEQSERIGNVTEVIRSISEQTNLLAL 396
Query: 113 NASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF-----------NSKVMDQLD 161
NA+IEAARAGE+GRGFAVVADE+R +A +T +EI+ NS + L
Sbjct: 397 NAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEIQAIIEELQNQSNTANSSMHSSLS 456
Query: 162 ALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKR 210
L + ++ + I + I+ + S+EQ Q DI R
Sbjct: 457 LLEQNQSLAAKVSASLTEINHSISALGQINAQVATASEEQSQVTKDINR 505
>pir||G72316 methyl-accepting chemotaxis protein - Thermotoga maritima (strain
MSB8) >gi|4981455|gb|AAD35999.1|AE001756_2 (AE001756)
methyl-accepting chemotaxis protein [Thermotoga
maritima]
Length = 661
Score = 87.8 bits (214), Expect = 1e-16
Identities = 73/257 (28%), Positives = 122/257 (47%), Gaps = 27/257 (10%)
Query: 3 IRTLEKASGALSHSLRLTVSS--KESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMK 60
I+ L + S +S +L E++ + S L E SG +E NI K+++ +
Sbjct: 372 IKVLSEESHKMSENLHEEAKKILDEANNMSSALTEVTSG--VEEVAASAQNISKITQDLT 429
Query: 61 E----LDKFQREFLPFFQRLETFANEFNTL--------------VQNLEYISKISDSIAS 102
E + K RE +R+E N L V + + I +I D+I+S
Sbjct: 430 ERSEAVTKAAREGT---ERVEAVGGVINKLKGSAERQRDYLRELVDSAKTIGEIVDTISS 486
Query: 103 VAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDA 162
+A+QTNL+ALNA+IEAARAGEAGRGFAVVADEIR++A ++ ++I + S + ++
Sbjct: 487 IAEQTNLLALNAAIEAARAGEAGRGFAVVADEIRKLAEESQRATEDIAKMLSSLRTTIEH 546
Query: 163 LRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFS 222
+ + K M + ++G ++ +L I + N + A E+ +
Sbjct: 547 VENGSKEMFEGVDEIAVMGE--EVTKRFREILGRIEEINSMIENTAATAQEQGAAAEEMA 604
Query: 223 ELQDRYNKELASLLRLL 239
D K + ++ L
Sbjct: 605 SAMDNVTKIVEGVVESL 621
>gb|AAC27628.1| (AF076485) defective in fruiting DifA [Myxococcus xanthus]
Length = 413
Score = 87.8 bits (214), Expect = 1e-16
Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 32/263 (12%)
Query: 5 TLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDK 64
++EK +G +L ++SK+++E+A G D + +E +
Sbjct: 139 SMEKIAGGAESQSQLV---SKASKVITEMA----GSIQRTTASAEDAARTTAETSSAAED 191
Query: 65 FQR-------EFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIE 117
+ + F R+E+ + + + + ISKI D+I VA+QTNL+ALNA+IE
Sbjct: 192 GSKAARLAGDKVKKVFNRIESASQQVFAFGEKTQEISKIVDAITQVAQQTNLLALNATIE 251
Query: 118 AARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQ----LDALRDALKVMDRI 173
AARAGE GRGFAVVADE+R++A A++I + + Q + A+++ + +
Sbjct: 252 AARAGEYGRGFAVVADEVRKLAESAGRSAEQISKLARDISGQSTSVVSAMKEGIAELAEG 311
Query: 174 REGTEILGRDIQIIVD-----------ISNVLNDISKEQEQFINDIKRLKGIALALEKFS 222
RE + R + I D IS + K E+ + I+ +K +A +
Sbjct: 312 REDLTNIVRSMGAITDTIRKGSEKVHLISESAREQLKGSEEMVTAIEEIKLVARNNASST 371
Query: 223 E-LQDRYNKELASLLRL--LASE 242
E +Q ++ A++ R+ LASE
Sbjct: 372 EAIQAVIQEQTAAVSRMTSLASE 394
>pir||E72379 methyl-accepting chemotaxis protein - Thermotoga maritima (strain
MSB8) >gi|4980935|gb|AAD35514.1|AE001721_13 (AE001721)
methyl-accepting chemotaxis protein [Thermotoga
maritima]
Length = 656
Score = 87.8 bits (214), Expect = 1e-16
Identities = 73/257 (28%), Positives = 122/257 (47%), Gaps = 27/257 (10%)
Query: 3 IRTLEKASGALSHSLRLTVSS--KESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMK 60
I+ L + S +S +L E++ + S L E SG +E NI K+++ +
Sbjct: 367 IKVLSEESHKMSENLHEEAKKILDEANNMSSALTEVTSG--VEEVAASAQNISKITQDLT 424
Query: 61 E----LDKFQREFLPFFQRLETFANEFNTL--------------VQNLEYISKISDSIAS 102
E + K RE +R+E N L V + + I +I D+I+S
Sbjct: 425 ERSEAVTKAAREGT---ERVEAVGGVINKLKGSAERQRDYLRELVDSAKTIGEIVDTISS 481
Query: 103 VAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDA 162
+A+QTNL+ALNA+IEAARAGEAGRGFAVVADEIR++A ++ ++I + S + ++
Sbjct: 482 IAEQTNLLALNAAIEAARAGEAGRGFAVVADEIRKLAEESQRATEDIAKMLSSLRTTIEH 541
Query: 163 LRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFS 222
+ + K M + ++G ++ +L I + N + A E+ +
Sbjct: 542 VENGSKEMFEGVDEIAVMGE--EVTKRFREILGRIEEINSMIENTAATAQEQGAAAEEMA 599
Query: 223 ELQDRYNKELASLLRLL 239
D K + ++ L
Sbjct: 600 SAMDNVTKIVEGVVESL 616
>pir||S74988 methyl-accepting chemotaxis protein slr1044 - Synechocystis sp.
(strain PCC 6803) >gi|1652103|dbj|BAA17028.1| (D90902)
methyl-accepting chemotaxis protein [Synechocystis sp.]
Length = 869
Score = 87.8 bits (214), Expect = 1e-16
Identities = 66/242 (27%), Positives = 127/242 (52%), Gaps = 25/242 (10%)
Query: 22 SSKESSKIVSELAEEISGKFMENNTL--ILDNIQKLSEI--------MKELDKFQREFLP 71
+S ++ ++ ELA ++ + ++ + +N ++ E+ +K + +R
Sbjct: 612 NSSDALRMAEELAVTLNSVQLMTESIERVAENAREAEEVAHTSSLTALKGGEAVERTVGG 671
Query: 72 FFQRLETF---ANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGF 128
Q ET A + L + + ISKI I+ +A +TNL+ALNASI+AARAGEAGRGF
Sbjct: 672 ILQIRETVSETARKVKRLAEASQEISKIVAVISQIASRTNLLALNASIQAARAGEAGRGF 731
Query: 129 AVVADEIRRMAVQTMNLAKEIKEFNSKVMDQ----LDALRDALKVMDRIREGTEILGRDI 184
A+VADE+R++A ++ KEI++ ++ + + A+ + ++ + + + +E R +
Sbjct: 732 AIVADEVRQLADRSAKSLKEIEQIVLQIQSETGSVMTAMEEGIQQVIDVTDKSEQSKRAL 791
Query: 185 QIIVDISNVLN--------DISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLL 236
+ I+++SN +N D K+QE ++ I L ++ S+ R L +L+
Sbjct: 792 EDIIEVSNRINTLVRSITADTVKQQENSGAVSNVMQSIELTAQETSQESQRVAGSLQTLV 851
Query: 237 RL 238
+
Sbjct: 852 SI 853
>sp|P39217|TLPB_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN TLPB >gi|1075831|pir||D54078
methyl-accepting chemotaxis protein tlpB - Bacillus
subtilis >gi|459691|gb|AAA20557.1| (L29189)
transmembrane receptor [Bacillus subtilis]
>gi|2635607|emb|CAB15101.1| (Z99119) methyl-accepting
chemotaxis protein [Bacillus subtilis]
>gi|2635619|emb|CAB15112.1| (Z99120) methyl-accepting
chemotaxis protein [Bacillus subtilis]
Length = 662
Score = 87.4 bits (213), Expect = 1e-16
Identities = 61/191 (31%), Positives = 105/191 (54%), Gaps = 6/191 (3%)
Query: 26 SSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEFNT 85
SS +S++ E IS ++T+ +IQ SE +K + + ++ +
Sbjct: 406 SSNHLSQMNEGISKVAQASSTITKSSIQS-SEAAGSGEKLVEHTVGQMKTIDQSVQKAEA 464
Query: 86 LVQNLEY----ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQ 141
+V+ LE I+ I + I +A QTNL+ALNA+IEAARAGE GRGF+VVA+E+R++AVQ
Sbjct: 465 VVKGLETKSQDITSILNVINGIADQTNLLALNAAIEAARAGEYGRGFSVVAEEVRKLAVQ 524
Query: 142 TMNLAKEIKEFNSKVMDQLD-ALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKE 200
+ + AKEI+ +++ ++ +L V ++EG +I + + I + IS E
Sbjct: 525 SADSAKEIEGLIQEIVREISTSLSMFQSVNHEVKEGLQITDQTAESFKQIYEMTTQISGE 584
Query: 201 QEQFINDIKRL 211
+ +++L
Sbjct: 585 LQNLNATVEQL 595
>pir||A72428 methyl-accepting chemotaxis protein - Thermotoga maritima (strain
MSB8) >gi|4980507|gb|AAD35117.1|AE001690_11 (AE001690)
methyl-accepting chemotaxis protein [Thermotoga
maritima]
Length = 656
Score = 87.4 bits (213), Expect = 1e-16
Identities = 73/257 (28%), Positives = 122/257 (47%), Gaps = 27/257 (10%)
Query: 3 IRTLEKASGALSHSLRLTVSS--KESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMK 60
I+ L + S +S +L E++ + S L E SG +E NI K+++ +
Sbjct: 367 IKVLSEESHKMSENLHEEAKKILDEANNMSSALTEVTSG--VEEVAASAQNISKITQDLT 424
Query: 61 E----LDKFQREFLPFFQRLETFANEFNTL--------------VQNLEYISKISDSIAS 102
E + K RE +R+E N L V + + I +I D+I+S
Sbjct: 425 ERSEAVTKAAREGT---ERVEAVGGVINKLKGSAERQRDYLRELVDSAKTIGEIVDTISS 481
Query: 103 VAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDA 162
+A+QTNL+ALNA+IEAARAGEAGRGFAVVADEIR++A ++ ++I + S + ++
Sbjct: 482 IAEQTNLLALNAAIEAARAGEAGRGFAVVADEIRKLAEESQRATEDIAKMLSSLRATIEH 541
Query: 163 LRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFS 222
+ + K M + ++G ++ +L I + N + A E+ +
Sbjct: 542 VENGSKEMFEGVDEIAVMGE--EVTKRFREILGRIEEINSMIENTAATAQEQGAAAEEMA 599
Query: 223 ELQDRYNKELASLLRLL 239
D K + ++ L
Sbjct: 600 SAMDNVTKIVEGVVESL 616
>pir||A54078 methyl-accepting chemotaxis protein mcpB - Bacillus subtilis
Length = 662
Score = 87.0 bits (212), Expect = 2e-16
Identities = 62/211 (29%), Positives = 116/211 (54%), Gaps = 9/211 (4%)
Query: 6 LEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKF 65
+E+ S R SS +++E +++S ++ + +IQ +EI +KF
Sbjct: 390 IEQFSNGNEEQSRKVESSSHQLNLMNEGLQQVS---QTSSDITKASIQS-TEIAGTGEKF 445
Query: 66 QREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASV----AKQTNLVALNASIEAARA 121
++ + + + +V+ LE SK SI V A QTNL+ALNA+IEAARA
Sbjct: 446 VQQTVGQMNSINQSVQQAEAVVKGLEGKSKDITSILRVINGIADQTNLLALNAAIEAARA 505
Query: 122 GEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLD-ALRDALKVMDRIREGTEIL 180
GE+GRGF+VVA+E+R++AVQ+ + AKEI++ +++ ++D +L +V ++ G +
Sbjct: 506 GESGRGFSVVAEEVRKLAVQSADSAKEIEKLIQEIVAEIDTSLHMFKEVNQEVQSGLVVT 565
Query: 181 GRDIQIIVDISNVLNDISKEQEQFINDIKRL 211
+ I ++ N+I+ + + + +++L
Sbjct: 566 DNTKESFQSIFSMTNEIAGKLQTMNSTVEQL 596
>emb|CAB99193.1| (AJ293587) hypothetical protein [Pseudomonas putida]
Length = 326
Score = 87.0 bits (212), Expect = 2e-16
Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 18/195 (9%)
Query: 6 LEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKF 65
+E+A+ A++ +++ SE A + S N + + ++ +SE+ ++
Sbjct: 83 IEQAATAVNEMSAAVEEMAQNATSTSEAARQSSDFAKLGNQCVNETLKAISELTGQV--- 139
Query: 66 QREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAG 125
E A + L + ISK+ I ++A+QTNL+ALNA+IEAARAGE G
Sbjct: 140 -----------ELTAEQIQHLAGQTQDISKVLSVIRAIAQQTNLLALNAAIEAARAGEQG 188
Query: 126 RGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQ----LDALRDALKVMDRIREGTEILG 181
RGFAVVAD+IR +A T KEI+E + + Q + +++ + + ++ E G
Sbjct: 189 RGFAVVADQIRALAHLTQGSTKEIEEMITSIQQQSSLAVVSMQFSATLAHETKKAAEKAG 248
Query: 182 RDIQIIVDISNVLND 196
R ++ I + +++D
Sbjct: 249 RSLESITNAVRLIDD 263
>pir||H75006 methyl-accepting chemotaxis related protein PAB1308 - Pyrococcus
abyssi (strain Orsay) >gi|5459008|emb|CAB50494.1|
(AJ248288) METHYL-ACCEPTING CHEMOTAXIS RELATED PROTEIN
[Pyrococcus abyssi]
Length = 435
Score = 87.0 bits (212), Expect = 2e-16
Identities = 52/198 (26%), Positives = 112/198 (56%), Gaps = 22/198 (11%)
Query: 20 TVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETF 79
TVS+ E + +++ + E D I+++S +M+++++ R + +E
Sbjct: 182 TVSTMEEFEASMREMAQLAKEGGEKGRQAADQIEEISRMMEKIEETVRGVAEMGKSIENI 241
Query: 80 ANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMA 139
N I+S+++QTNL+ALNA+IEAARAGEAG+GFAVVADEIR++A
Sbjct: 242 TNV-----------------ISSISEQTNLLALNAAIEAARAGEAGKGFAVVADEIRKLA 284
Query: 140 VQTMNLAKEIKEFNSKVMDQL-DALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDI- 197
++ A++I+E ++ D++ +++ + + ++ TE++ + + ++ ++ ++
Sbjct: 285 EESKKAAEDIRELIKQIGDKIGESVEVTQQGAEVVKTSTEVIKESVSYLTQVAEMMEEME 344
Query: 198 ---SKEQEQFINDIKRLK 212
S+ +E+ I + ++++
Sbjct: 345 VKASELREKVIQEGEKIE 362
>pir||E83067 probable chemotaxis transducer PA4633 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9950886|gb|AAG08021.1|AE004877_8 (AE004877) probable
chemotaxis transducer [Pseudomonas aeruginosa]
Length = 712
Score = 86.6 bits (211), Expect = 2e-16
Identities = 63/172 (36%), Positives = 92/172 (52%), Gaps = 22/172 (12%)
Query: 86 LVQNL----EYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQ 141
+VQNL E I+ I +I +A+QTNL+ALNA+IEAARAGE GRGFAVVADE+R +A +
Sbjct: 531 VVQNLAKDSENINAILVAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQK 590
Query: 142 TMNLAKEIKEFNSKVMDQLDALRDALKVM--------DRIR------EGTEILGRDIQII 187
T +EI+ S + RD +KVM D +R E E + + + +I
Sbjct: 591 TQQATEEIQ---SMIQQLQQGTRDVVKVMQDSQERTDDSVRHARQAAEALESITQAVSVI 647
Query: 188 VDISNVLNDISKEQEQFINDIKR-LKGIALALEKFSELQDRYNKELASLLRL 238
D++ + ++EQ DI R + I + + D ++ A L RL
Sbjct: 648 NDMNTQIASAAEEQSAVAEDINRNVANIGQVANQVAGGADEASQASAELTRL 699
>pir||T44849 transducer protein car [validated] - Halobacterium salinarum
(strain S9) >gi|4469246|emb|CAB38318.1| (AJ132321) Car
protein [Halobacterium salinarum]
Length = 452
Score = 86.6 bits (211), Expect = 2e-16
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 62/283 (21%)
Query: 15 HSLRLTVSSK---------ESSKIVSELAEE---ISGKFMENNTLILDNIQKLSEIMKEL 62
H L TVSS ES V AEE +G+ +E + D + S ++E+
Sbjct: 167 HDLHETVSSNVGEHLSELSESIDEVGSFAEETEAFAGEEIERMEGVADEVSNQSATIEEI 226
Query: 63 DKFQREFLPFFQRLETFANE-------------------------FNTLVQNLEYISKIS 97
E QR + A E + L + +S+I
Sbjct: 227 ASSAEEVSQASQRAQDRATEGEQTAETAIDRMGAVQESAERVNDTIDGLTSQADEMSEII 286
Query: 98 DSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVM 157
D+I +A QTN++ALNASIEAARAGE G GFAVVADE++ +A ++ A EI++ +++
Sbjct: 287 DAINDIADQTNMLALNASIEAARAGEKGEGFAVVADEVKSLAEESQERADEIEQMIVEMV 346
Query: 158 DQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIA-- 215
+ D + DRI + T + I + + + L +I K ++ +K + G
Sbjct: 347 ETTD------QTADRIGQTTTEIEEAITAVRETLDSLQEIRKAVDETATGVKEVAGATDD 400
Query: 216 -------------LALEKFSELQDRYNKELASLLRLLASEYSR 245
A++K +EL+DR L +L ++ + ++ R
Sbjct: 401 HAASTEQVAATTDEAVDKLTELEDR----LDNLSQIASEQHDR 439
>dbj|BAB07487.1| (AP001519) methyl-accepting chemotaxis protein [Bacillus
halodurans]
Length = 433
Score = 86.6 bits (211), Expect = 2e-16
Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 12/230 (5%)
Query: 5 TLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDK 64
T+ + S +S + E+ V+++AE++ + ++ + ++ L+E K +D
Sbjct: 160 TMSEISKGAENSAESVQQTAEAMDQVNQIAEQVQERMEKSRQSSNEMVKTLAESRKVIDS 219
Query: 65 FQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA 124
+ E + L + + + +I + +A+QTNL+ALNASIEAARAGE
Sbjct: 220 LVLGIKQLAEDNEKSLDSVGRLEEQAKEVDEIISLVGDIAEQTNLLALNASIEAARAGEH 279
Query: 125 GRGFAVVADEIRRMAVQT-------MNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGT 177
G+GFAVVADE+R++A ++ NL + I+E V+ Q+ + K T
Sbjct: 280 GKGFAVVADEVRKLADESGKAVQGISNLVRNIQEEVKHVVTQIGTQVEKAKTESEKGTAT 339
Query: 178 EILGRDIQIIV-DISNVLNDIS---KEQEQFIND-IKRLKGIALALEKFS 222
++++ V +++NV+ +IS K Q + I + K+ + +A E+ S
Sbjct: 340 NRAIQEVETSVREVANVIEEISEMMKTQTKAIRETAKQTQEVAAIAEETS 389
>pir||A82407 methyl-accepting chemotaxis protein VCA0864 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658296|gb|AAF96762.1| (AE004414) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 465
Score = 86.6 bits (211), Expect = 2e-16
Identities = 51/137 (37%), Positives = 83/137 (60%), Gaps = 6/137 (4%)
Query: 76 LETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEI 135
+E + LV + +S+I +I+ +A QTNL+ALNA+IEAARAGE GRGFAVVADE+
Sbjct: 335 IEQSLQQIEQLVVLSKDVSEIVKTISGIADQTNLLALNAAIEAARAGEQGRGFAVVADEV 394
Query: 136 RRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLN 195
R++A +T +EI + +K + +A+ ++ + +I T GR IV++S ++
Sbjct: 395 RQLASRTSKATEEINQVVNKNLSLTEAVTSSISQVSQIANETN--GR----IVEVSTIME 448
Query: 196 DISKEQEQFINDIKRLK 212
I + E + + +LK
Sbjct: 449 QIYQGAENVSSAVSQLK 465
>pir||E82481 methyl-accepting chemotaxis protein VCA0268 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9657665|gb|AAF96179.1| (AE004366) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 643
Score = 86.2 bits (210), Expect = 3e-16
Identities = 65/250 (26%), Positives = 130/250 (52%), Gaps = 28/250 (11%)
Query: 5 TLEKASGALSHSLRLTVS-SKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELD 63
++E+ S + ++ +S S E+ ++V+ + + E+ + +++ + ++I +
Sbjct: 377 SIEQLSQTAKENEQMLISHSSETDQVVTAITQ-----MSESARTVAESVTQSNQITEAAS 431
Query: 64 KFQREFLPFFQR-----------LETFANEFNTLVQNLEYISKISDSIASVAKQTNLVAL 112
K ++ L +E + + + ++ IS++ I ++++QTNL+AL
Sbjct: 432 KEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGAISEQTNLLAL 491
Query: 113 NASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDR 172
NA+IEAARAGE GRGFAVVADE+R +A +T N EI + +K+++ D++ A M+R
Sbjct: 492 NAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDSVVGA---MER 548
Query: 173 IREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLK-GIALALEKFSELQDRYNKE 231
++ + ++S LN +S ++DI L IA A E+ S + ++
Sbjct: 549 TKQQCQTTADKTS---EVSGSLNMMSAS----VSDIDDLSTQIAAATEQQSTVAAELSRN 601
Query: 232 LASLLRLLAS 241
+ S+ ++ S
Sbjct: 602 MLSIREIVES 611
>pir||E82379 methyl-accepting chemotaxis protein VCA1088 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658535|gb|AAF96981.1| (AE004434) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 384
Score = 86.2 bits (210), Expect = 3e-16
Identities = 56/189 (29%), Positives = 103/189 (53%), Gaps = 6/189 (3%)
Query: 23 SKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANE 82
S+E S + ++L + + M N D +Q L + + +F + + ++ + +
Sbjct: 115 SEEQSSVSTQLVDNL----MANQGSEFDLMQVLPKTEAIIQQFVQILVDVSEKSISAVHS 170
Query: 83 FNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQT 142
+ + Q L+ + K+ + + S+++QTNL+ALNA+IEAARAGEAGRGFAVVA E+R +++Q
Sbjct: 171 IHDMSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRNLSIQA 230
Query: 143 MNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQE 202
NL +I+ D +D + M + T+ + ++ + V ++ E E
Sbjct: 231 ANLNTQIETEMKVAQDTVDIANRTVGEMASF-DMTQAIESKEKVDYMLRGV-QQLNTEIE 288
Query: 203 QFINDIKRL 211
Q +N ++RL
Sbjct: 289 QEVNKLQRL 297
>sp|P15492|HLYB_VIBCH HEMOLYSIN SECRETION PROTEIN PRECURSOR >gi|79266|pir||S15910
hemolysin-releasing protein - Vibrio cholerae
>gi|2190531|emb|CAA68638.1| (Y00557) methyl accepting
chemotaxis protein [Vibrio cholerae]
Length = 548
Score = 85.8 bits (209), Expect = 4e-16
Identities = 61/186 (32%), Positives = 107/186 (56%), Gaps = 25/186 (13%)
Query: 75 RLETFANEFNTLVQ-------NLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRG 127
R++T NE + Q + IS D+I S+++QTNL+ALNA+IEAARAGE GRG
Sbjct: 353 RIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRG 412
Query: 128 FAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEIL----GRD 183
FAVVADE+R +A ++ +EI++ +++ Q ++ R A++ M++ R ++++ +
Sbjct: 413 FAVVADEVRTLASRSAASTEEIQQVINRL--QTESTR-AVEAMEKGRSQSDVVVEFSAKA 469
Query: 184 IQIIVDISNVLNDI----------SKEQEQFINDIKR-LKGIALALEKFSELQDRYNKEL 232
Q + +I++ ++ I ++EQ + DI R ++ I + S + D ++
Sbjct: 470 NQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRAS 529
Query: 233 ASLLRL 238
ASL RL
Sbjct: 530 ASLQRL 535
>pir||B69896 methyl-accepting chemotaxis protein homolog yoaH - Bacillus
subtilis >gi|2619023|gb|AAB84447.1| (AF027868) YoaH
[Bacillus subtilis] >gi|2634254|emb|CAB13753.1| (Z99114)
similar to methyl-accepting chemotaxis protein [Bacillus
subtilis]
Length = 534
Score = 85.8 bits (209), Expect = 4e-16
Identities = 61/208 (29%), Positives = 114/208 (54%), Gaps = 19/208 (9%)
Query: 12 ALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIM--------KELD 63
A +++ + +++S++ ++EL + IS + +NT NI LS M K ++
Sbjct: 266 AADSNVKQSSMTEKSAESITELLDSISS--VASNT---GNIADLSSSMRDKAEIGSKSVN 320
Query: 64 KFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGE 123
K + + +++ N TLV + IS IS I ++++QTNL+ALNA+IEAARAGE
Sbjct: 321 KMLDQMKFIDKSVDSAGNGLQTLVASTAEISDISSLITTISEQTNLLALNAAIEAARAGE 380
Query: 124 AGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRD 183
G+GFAVVA+E+R++A +T A I+ + + + ++++ ++ I+ E +
Sbjct: 381 QGKGFAVVAEEVRKLADETNKSANHIQSVVATIQN------ESIETVNNIKVVQENVSSG 434
Query: 184 IQIIVDISNVLNDISKEQEQFINDIKRL 211
I + + + N+I EQ + I+ +
Sbjct: 435 IVLSQETTGNFNEILNLVEQVTSQIQEV 462
>pir||B82486 hemolysin secretion protein HylB VCA0220 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9657614|gb|AAF96132.1| (AE004362) hemolysin
secretion protein HylB [Vibrio cholerae]
Length = 548
Score = 85.8 bits (209), Expect = 4e-16
Identities = 61/186 (32%), Positives = 107/186 (56%), Gaps = 25/186 (13%)
Query: 75 RLETFANEFNTLVQ-------NLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRG 127
R++T NE + Q + IS D+I S+++QTNL+ALNA+IEAARAGE GRG
Sbjct: 353 RIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRG 412
Query: 128 FAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEIL----GRD 183
FAVVADE+R +A ++ +EI++ +++ Q ++ R A++ M++ R ++++ +
Sbjct: 413 FAVVADEVRTLASRSAASTEEIQQVINRL--QTESTR-AVEAMEKGRSQSDVVVEFSAKA 469
Query: 184 IQIIVDISNVLNDI----------SKEQEQFINDIKR-LKGIALALEKFSELQDRYNKEL 232
Q + +I++ ++ I ++EQ + DI R ++ I + S + D ++
Sbjct: 470 NQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRAS 529
Query: 233 ASLLRL 238
ASL RL
Sbjct: 530 ASLQRL 535
>pir||G64532 methyl-accepting chemotaxis protein - Helicobacter pylori (strain
26695) >gi|2313186|gb|AAD07173.1| (AE000532)
methyl-accepting chemotaxis protein (tlpB) [Helicobacter
pylori 26695]
Length = 565
Score = 85.8 bits (209), Expect = 4e-16
Identities = 70/265 (26%), Positives = 127/265 (47%), Gaps = 18/265 (6%)
Query: 3 IRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKEL 62
I TL K S + +++T +++S K S + K + +++ +I++ + K L
Sbjct: 293 ISTLNKTS--MDKLVQITQETQKSMKDSSTTLNSVKNKATDIASMMNASIEQSQGLRKRL 350
Query: 63 DKFQ--------------REFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTN 108
+ Q + E +++ L +N + + I D I +A QTN
Sbjct: 351 IETQGLVKESKDAIGDLFSQITESAHTEEELSSKVEQLSRNADDVKSILDIINDIADQTN 410
Query: 109 LVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALK 168
L+ALNA+IEAARAGE GRGFAVVADE+R +A +T EI ++ +++A+ +
Sbjct: 411 LLALNAAIEAARAGEHGRGFAVVADEVRNLAGRTQKSLAEINSTIMVIVQEINAVSSQMN 470
Query: 169 VMDRIREGTEILGRDIQIIVD-ISNVLNDISKEQEQFIND-IKRLKGIALALEKFSELQD 226
+ + E + + +Q + +S+ L+ + + Q ++D K I + + F+E++
Sbjct: 471 LNSQKMERLSDMSKSVQETYEKMSSNLSSVVSDSNQSMDDYAKSGHQIEVMVSDFAEVEK 530
Query: 227 RYNKELASLLRLLASEYSRSGGDSN 251
+K LA +L SG N
Sbjct: 531 VASKTLADSSDILNIATHVSGTTMN 555
>pir||D83297 probable chemotaxis transducer PA2788 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9948870|gb|AAG06176.1|AE004706_6 (AE004706) probable
chemotaxis transducer [Pseudomonas aeruginosa]
Length = 531
Score = 85.8 bits (209), Expect = 4e-16
Identities = 56/148 (37%), Positives = 83/148 (55%), Gaps = 11/148 (7%)
Query: 74 QRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVAD 133
+ LE A NTL Q+ + ++ I+S+A+QTNL+ALNA+IEAARAGEAGRGFAVVAD
Sbjct: 342 EELEQTALALNTLHQHAGSVGQVLTVISSIAEQTNLLALNAAIEAARAGEAGRGFAVVAD 401
Query: 134 EIRRMAVQTMNLAKE----IKEFNSKVMDQLDALR----DALKVMDRIREGTEILGRDIQ 185
E+R +A +T +E I++ D + A+R A + + LGR +
Sbjct: 402 EVRSLANRTQQSTQEIQGLIEQLQDGANDAVAAMRGSASHAQSNLVEADSAAQALGRIVA 461
Query: 186 IIVDISNVLNDI---SKEQEQFINDIKR 210
+ ++ + I ++EQ Q DI R
Sbjct: 462 TVEELDGLNQQIATAAEEQSQVAQDIDR 489
>pir||E81442 probable MCP-domain signal transduction protein Cj0246c [imported]
- Campylobacter jejuni (strain NCTC 11168)
>gi|6967723|emb|CAB72714.1| (AL139074) putative
MCP-domain signal transduction protein [Campylobacter
jejuni]
Length = 375
Score = 85.4 bits (208), Expect = 6e-16
Identities = 58/219 (26%), Positives = 108/219 (48%), Gaps = 18/219 (8%)
Query: 23 SKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLE----- 77
+ E +KI+ ++ + + +N ++ + ++L I + L F F LE
Sbjct: 156 TNEINKIILNQLKQNTSEIDKNTSIFKEIFEELENIRRSLTTISESFTNFTNYLEYNLYQ 215
Query: 78 -----TFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVA 132
E + ++N++ ++ I D I+ +A+QT L++LNA IEAARAG+ GRGFAVVA
Sbjct: 216 SEEKMNLEKEVQSSLKNIDQLNSILDLISGIAEQTILLSLNAGIEAARAGKLGRGFAVVA 275
Query: 133 DEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALK--------VMDRIREGTEILGRDI 184
DE+R+++ T E++ V+ + ++ + + D+ E ++I+ I
Sbjct: 276 DEVRKLSENTQMGLGEMEGAIKLVIQTIQSIAKSSNSSTQEMNFIRDKTNEFSKIISNLI 335
Query: 185 QIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSE 223
+IS+ L S E F ++ +LK L K ++
Sbjct: 336 NSGKEISDKLEQRSNVSEDFEKNVNQLKCYEDVLAKLNQ 374
>pir||H75002 methyl-accepting chemotaxis protein PAB1026 - Pyrococcus abyssi
(strain Orsay) >gi|5458976|emb|CAB50462.1| (AJ248288)
METHYL-ACCEPTING CHEMOTAXIS PROTEIN [Pyrococcus abyssi]
Length = 374
Score = 85.4 bits (208), Expect = 6e-16
Identities = 57/158 (36%), Positives = 90/158 (56%), Gaps = 11/158 (6%)
Query: 75 RLETFANEFNTLVQNL-EYISKISDS---IASVAKQTNLVALNASIEAARAGEAGRGFAV 130
R+ + E + V+ L EY KI+D I+S+A QTNL+ALNASIEAARAGEAGRGFAV
Sbjct: 172 RISETSREMSDAVRILAEYSKKINDIVYVISSIASQTNLLALNASIEAARAGEAGRGFAV 231
Query: 131 VADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDI 190
VA+ +R +A ++ A+EI+ ++ + ++ +V+ I+E + + I ++
Sbjct: 232 VAENVRELADRSKKSAEEIRNLIEEMQENIN------RVIQAIQENVRVTEEVKEAIQNL 285
Query: 191 SNVLNDISKEQEQFINDIKRL-KGIALALEKFSELQDR 227
+DI++ + N +K L +GI L DR
Sbjct: 286 IAAFDDIARRANETANMVKELSEGIDEQANSVQMLVDR 323
>sp|P39214|MCPA_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPA (H1)
>gi|1075866|pir||B54078 methyl-accepting chemotaxis
transducer mcpA - Bacillus subtilis
>gi|459690|gb|AAA20556.1| (L29189) transmembrane
receptor [Bacillus subtilis] >gi|2635608|emb|CAB15102.1|
(Z99119) methyl-accepting chemotaxis protein [Bacillus
subtilis] >gi|2635620|emb|CAB15113.1| (Z99120)
methyl-accepting chemotaxis protein [Bacillus subtilis]
Length = 661
Score = 85.4 bits (208), Expect = 6e-16
Identities = 62/200 (31%), Positives = 109/200 (54%), Gaps = 5/200 (2%)
Query: 47 LILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISK----ISDSIAS 102
+I D+ + +EI E K + + ++ E +V+ LE SK I I
Sbjct: 426 VITDSSVQSTEIASEGGKLVHQTVGQMNVIDKSVKEAEQVVRGLETKSKDITNILRVING 485
Query: 103 VAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLD- 161
+A QTNL+ALNA+IEAARAGE GRGF+VVA+E+R++AVQ+ + AKEI+ +++ +++
Sbjct: 486 IADQTNLLALNAAIEAARAGEYGRGFSVVAEEVRKLAVQSADSAKEIEGLIIEIVKEINT 545
Query: 162 ALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKF 221
+L V ++ G +I + IS + N I+ E + +++L + +
Sbjct: 546 SLGMFQSVNQEVQTGLDITDKTEMSFKRISEMTNQIAGELQNMSATVQQLSASSEEVSGA 605
Query: 222 SELQDRYNKELASLLRLLAS 241
SE +KE ++ ++ +A+
Sbjct: 606 SEHIASISKESSAHIQDIAA 625
>gb|AAA21387.1| (L25660) accessory colonization factor [Vibrio cholerae]
Length = 626
Score = 85.0 bits (207), Expect = 7e-16
Identities = 65/232 (28%), Positives = 115/232 (49%), Gaps = 23/232 (9%)
Query: 4 RTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELD 63
R L+ + +++ + + + + SE+ +I+G+ E + + + ++++LD
Sbjct: 381 RELDMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLD 440
Query: 64 KFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGE 123
K ++ + N QN++ I K +I +A QTNL+ALNA+IEAARAGE
Sbjct: 441 K-----------TKSVIQDLNRQTQNIDVILK---AINDIADQTNLLALNAAIEAARAGE 486
Query: 124 AGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRD 183
GRGFAVVADE+R +A++T K I ++ + L ++ VMD E I
Sbjct: 487 NGRGFAVVADEVRSLAIKTQESTKNIGSI-IHILQENSLL--SVHVMD---ESFNIASET 540
Query: 184 IQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASL 235
+ I D L++IS+ Q ++ + +A A + S + + N S+
Sbjct: 541 MTISADSKQCLDNISQSVIQIVDITNQ---VATAAYEQSHVSEEINSNSISI 589
>sp|P39215|MCPB_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB (H3)
>gi|459688|gb|AAA20554.1| (L29189) transmembrane
receptor [Bacillus subtilis] >gi|2635610|emb|CAB15104.1|
(Z99119) methyl-accepting chemotaxis protein [Bacillus
subtilis] >gi|2635622|emb|CAB15115.1| (Z99120)
methyl-accepting chemotaxis protein [Bacillus subtilis]
Length = 662
Score = 85.0 bits (207), Expect = 7e-16
Identities = 62/211 (29%), Positives = 115/211 (54%), Gaps = 9/211 (4%)
Query: 6 LEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKF 65
+E+ S R SS +++E +++S ++ + +IQ +EI +KF
Sbjct: 390 IEQFSNGNEEQSRKVESSSHQLNLMNEGLQQVS---QTSSDITKASIQS-TEIAGTGEKF 445
Query: 66 QREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASV----AKQTNLVALNASIEAARA 121
++ + + +V+ LE SK SI V A QTNL+ALNA+IEAARA
Sbjct: 446 VQQTGGQMNSINQSVQQAEAVVKGLEGKSKDITSILRVINGIADQTNLLALNAAIEAARA 505
Query: 122 GEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLD-ALRDALKVMDRIREGTEIL 180
GE+GRGF+VVA+E+R++AVQ+ + AKEI++ +++ ++D +L +V ++ G +
Sbjct: 506 GESGRGFSVVAEEVRKLAVQSADSAKEIEKLIQEIVAEIDTSLHMFKEVNQEVQSGLVVT 565
Query: 181 GRDIQIIVDISNVLNDISKEQEQFINDIKRL 211
+ I ++ N+I+ + + + +++L
Sbjct: 566 DNTKESFQSIFSMTNEIAGKLQTMNSTVEQL 596
>gb|AAA82705.1| (U39068) AcfB [Vibrio cholerae]
Length = 480
Score = 85.0 bits (207), Expect = 7e-16
Identities = 65/232 (28%), Positives = 115/232 (49%), Gaps = 23/232 (9%)
Query: 4 RTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELD 63
R L+ + +++ + + + + SE+ +I+G+ E + + + ++++LD
Sbjct: 235 RELDMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLD 294
Query: 64 KFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGE 123
K ++ + N QN++ I K +I +A QTNL+ALNA+IEAARAGE
Sbjct: 295 K-----------TKSVIQDLNRQTQNIDVILK---AINDIADQTNLLALNAAIEAARAGE 340
Query: 124 AGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRD 183
GRGFAVVADE+R +A++T K I ++ + L ++ VMD E I
Sbjct: 341 NGRGFAVVADEVRSLAIKTQESTKNIGSI-IHILQENSLL--SVHVMD---ESFNIASET 394
Query: 184 IQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASL 235
+ I D L++IS+ Q ++ + +A A + S + + N S+
Sbjct: 395 MTISADSKQCLDNISQSVIQIVDITNQ---VATAAYEQSHVSEEINSNSISI 443
>pir||E82273 accessory colonization factor AcfB VC0840 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655292|gb|AAF94003.1| (AE004169) accessory
colonization factor AcfB [Vibrio cholerae]
Length = 626
Score = 85.0 bits (207), Expect = 7e-16
Identities = 65/232 (28%), Positives = 115/232 (49%), Gaps = 23/232 (9%)
Query: 4 RTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELD 63
R L+ + +++ + + + + SE+ +I+G+ E + + + ++++LD
Sbjct: 381 RELDMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLD 440
Query: 64 KFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGE 123
K ++ + N QN++ I K +I +A QTNL+ALNA+IEAARAGE
Sbjct: 441 K-----------TKSVIQDLNRQTQNIDVILK---AINDIADQTNLLALNAAIEAARAGE 486
Query: 124 AGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRD 183
GRGFAVVADE+R +A++T K I ++ + L ++ VMD E I
Sbjct: 487 NGRGFAVVADEVRSLAIKTQESTKNIGSI-IHILQENSLL--SVHVMD---ESFNIASET 540
Query: 184 IQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASL 235
+ I D L++IS+ Q ++ + +A A + S + + N S+
Sbjct: 541 MTISADSKQCLDNISQSVIQIVDITNQ---VATAAYEQSHVSEEINSNSISI 589
>pir||E82419 methyl-accepting chemotaxis protein VCA0773 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658196|gb|AAF96671.1| (AE004405) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 473
Score = 85.0 bits (207), Expect = 7e-16
Identities = 63/229 (27%), Positives = 118/229 (51%), Gaps = 22/229 (9%)
Query: 2 NIRTLEKASGALSHSLR---LTVSSKESS-KIVSELAEEISGKFMENNTLILDNIQKLSE 57
N TL + +H ++ + + ++ SS V+ EE++ E +T ++ +
Sbjct: 201 NSATLRDTAMTFAHEVKESEVQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQ 260
Query: 58 IMKELDKFQREFLPFFQRLETFA-------NEFNTLVQNLEYISKISDSIASVAKQTNLV 110
K++++ Q+ Q +E + + TL N I+ + +I ++++QTNL+
Sbjct: 261 DTKQVERSQQRVRKAIQDIEQLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLL 320
Query: 111 ALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKV-MDQLDALRDALKV 169
ALNA+IEAARAGE GRGFAVVADE+R +A +T + EI+ K+ ++ + + +
Sbjct: 321 ALNAAIEAARAGEQGRGFAVVADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQT 380
Query: 170 MDRIREGTEI---LGRDIQIIVDISNVLNDIS-------KEQEQFINDI 208
+ + +++ +G D+Q I + ++ND+S EQ +DI
Sbjct: 381 VSQAHTSSQLVSEVGNDVQAIAHSAQLINDLSVQISTSASEQSSVAHDI 429
>dbj|BAB04224.1| (AP001508) methyl-accepting chemotaxis protein [Bacillus
halodurans]
Length = 439
Score = 85.0 bits (207), Expect = 7e-16
Identities = 61/222 (27%), Positives = 118/222 (52%), Gaps = 12/222 (5%)
Query: 27 SKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEFNTL 86
S+ V A E + ++ TL L+ +++ +D L + ++T + + N
Sbjct: 229 SETVVASANEGTDLAIKAETLSLNGKAQITTQSSNMDAI----LQSVKHIQTISTDLND- 283
Query: 87 VQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLA 146
+++E I++ D + +A QTNL+ALNA+IEA+RAGE G+GFAVVA+E+R++A QT
Sbjct: 284 -RSIE-ITEFVDVVKGIADQTNLLALNATIEASRAGEKGKGFAVVANEVRKLADQTKAST 341
Query: 147 KEIKEFNSKVMDQLDALRDAL-KVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFI 205
+ + K +Q+ ++ +++ + + EG++ + I+ +N++ + EQ
Sbjct: 342 NTVSQLIEKTTEQIASVVESIGTIYQLVSEGSKGMDSTAGTFHSITEAMNEVKTKNEQMK 401
Query: 206 NDIKRLKGIALALEKFSELQDRYNKELASLLRLLASEYSRSG 247
D+++L + L++ S LQ + A+ L L +E G
Sbjct: 402 TDLQQLLSVTKELDE-SSLQ---VSQSANQLNRLTTEVESGG 439
>dbj|BAB04284.1| (AP001509) methyl-accepting chemotaxis protein [Bacillus
halodurans]
Length = 401
Score = 85.0 bits (207), Expect = 7e-16
Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 34/242 (14%)
Query: 21 VSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKE-LDKFQREFLPFFQRLETF 79
+S +E ++ + +L++ S + E + LD Q+ SE +K+ L+K ++ Q + T
Sbjct: 129 MSMEEMTQAIEDLSQR-SNEISELSNTTLDLTQEGSEKLKDSLEKMKQ----LNQTINTT 183
Query: 80 ANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMA 139
+ N L + I I I +++Q NL+ALNASIEAARAGE G+GFAVVADE+R++A
Sbjct: 184 YDAINKLGEKSHEIGMIVKVITGISEQINLLALNASIEAARAGEHGKGFAVVADEVRKLA 243
Query: 140 VQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDI--------- 190
Q+ + E+ + ++ V+ +++GTE IV++
Sbjct: 244 EQSRQSSSEVSNIVKNIQEETGI------VVGSMQKGTEEFEDTNTTIVEVGAMFEKILT 297
Query: 191 ------------SNVLNDISKEQEQFINDIKRLKGIAL-ALEKFSELQDRYNKELASLLR 237
S ++S +Q + I+ + I+ ++E F EL + + EL++L +
Sbjct: 298 ATRTIAENNGNSSASTEELSAASQQIMTTIEEIASISRESVEMFEELTEISDDELSTLEK 357
Query: 238 LL 239
L+
Sbjct: 358 LV 359
>pir||H82147 methyl-accepting chemotaxis protein VC1868 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9656398|gb|AAF95016.1| (AE004262) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 626
Score = 84.7 bits (206), Expect = 9e-16
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
Query: 76 LETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEI 135
L++ A+ L Q + + D I +A+QTNL+ALNA+IEAARAGE GRGFAVVADE+
Sbjct: 439 LQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 498
Query: 136 RRMAVQTMNLAKEIK-EFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVL 194
R +AV+T+N EI + + + + + + EG + +Q + I+
Sbjct: 499 RSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGT 558
Query: 195 NDISKEQEQFINDIKRLKGIALAL-EKFSELQ------DRYNKEL 232
++ + + E+ + IK L + A+ E S++ + YN +L
Sbjct: 559 DEAASQTERIFSSIKELSATSQAMAESMSQISSAMQALESYNTQL 603
>pir||G82490 methyl-accepting chemotaxis protein VCA0176 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9657567|gb|AAF96089.1| (AE004358) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 644
Score = 84.7 bits (206), Expect = 9e-16
Identities = 50/133 (37%), Positives = 80/133 (59%), Gaps = 9/133 (6%)
Query: 76 LETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEI 135
+E L + I I D+I +++QTNL+ALNA+IEAARAG+ GRGFAVVADE+
Sbjct: 457 IENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEV 516
Query: 136 RRMAVQTMNLAKEIKEFNSKVMDQL-DALRDALKVMDR----IREGTEILGRDIQIIVDI 190
R +A +T + +EI+ K+++QL + ++A+ MD +G +Q+++ I
Sbjct: 517 RNLASRTASSTEEIQ----KMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSI 572
Query: 191 SNVLNDISKEQEQ 203
S+ ++DIS Q
Sbjct: 573 SDRIHDISDRNTQ 585
>pir||E82431 methyl-accepting chemotaxis protein VCA0663 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658080|gb|AAF96564.1| (AE004396) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 587
Score = 84.7 bits (206), Expect = 9e-16
Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 27/229 (11%)
Query: 11 GALSHSLRLTVSS----KESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQ 66
G ++ S++ VS+ ES+ I + + + + ++++ ++ + + L K Q
Sbjct: 342 GLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQ 401
Query: 67 REFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGR 126
+ +L +E I I +A+QTNL+ALNA+IEAARAGE GR
Sbjct: 402 --------------HSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGR 447
Query: 127 GFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQI 186
GFAVVADE+R +A +T +EI S + Q+ + D + + + +G E L Q+
Sbjct: 448 GFAVVADEVRSLATRTHQSTEEITRVVSNIQSQMSQVVDDIDLCN--NQGQETLSASRQL 505
Query: 187 IVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASL 235
+ +L D+ Q+ + IA A+E+ + + ++ +A L
Sbjct: 506 DESLQQILRDMHTIQD-------NSQRIAAAIEEQGSVMNHVSESIAEL 547
>gb|AAG13635.1| (AF036940) putative chemotaxis protein [Ralstonia sp. U2]
Length = 423
Score = 84.7 bits (206), Expect = 9e-16
Identities = 76/255 (29%), Positives = 122/255 (47%), Gaps = 28/255 (10%)
Query: 2 NIRTLEKASGALS---HSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEI 58
N +LE AS ++ H L S+ SS + + E G + N DN + +++
Sbjct: 121 NAESLEAASSEIAQGNHDLSARTESQASSLEETAASMEELGSTVRQNA---DNARHANQL 177
Query: 59 MKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIA---SVAKQTNLVALNAS 115
+ Q E A NT+ E KI+D I+ +A QTN++ALNA+
Sbjct: 178 AQSASTVA------VQGGEAVAQVVNTMTGINESSRKIADIISVIDGIAFQTNILALNAA 231
Query: 116 IEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIRE 175
+EAARAGE GRGFAVVA E+R +A ++ AKEIK + + D + + ++D+
Sbjct: 232 VEAARAGEHGRGFAVVATEVRSLAQRSAEAAKEIK---TLINDSVGRVEQGSALVDQAGT 288
Query: 176 GTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASL 235
+ I+ + DI ++ S EQ Q G+A E + + D+ ++ A+L
Sbjct: 289 TMREVVDSIRRVTDIMGEISAASTEQSQ---------GVAQVGEAVTNM-DQATQQNAAL 338
Query: 236 LRLLASEYSRSGGDS 250
+ +A+ SR G S
Sbjct: 339 VEQMAAAASRLKGQS 353
>pir||B64530 methyl-accepting chemotaxis transducer (tlpC) - Helicobacter pylori
(strain 26695) >gi|2313163|gb|AAD07152.1| (AE000530)
methyl-accepting chemotaxis transducer (tlpC)
[Helicobacter pylori 26695]
Length = 673
Score = 83.9 bits (204), Expect = 2e-15
Identities = 57/173 (32%), Positives = 85/173 (48%), Gaps = 15/173 (8%)
Query: 55 LSEIMKELDKFQREFLPFFQRLETFANEFNTL-------VQNLEYISKISDSIASVAKQT 107
+ + K K +R Q LE N T+ + E I + D I +A QT
Sbjct: 500 VDNLTKTAHKQERSLKNTTQSLEEITNIITTIDSKSQEMISQGEDIKSVVDMIRDIADQT 559
Query: 108 NLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKE----FNSKVMDQLDAL 163
NL+ALNA+IEAARAGE GRGFAVVADE+R++A +T EI+ + D +++
Sbjct: 560 NLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANINILVQSIADNAESI 619
Query: 164 RDALKVMDRIREGTEILGRDIQIIVDISN----VLNDISKEQEQFINDIKRLK 212
+ K ++ I L +D+Q + I+N V I + + D+ R K
Sbjct: 620 KMQNKGVENIHNSINALQQDVQDNLTIANHSLQVSTKIDGISQDILEDVSRKK 672
>pir||B71160 probable methyl-accepting chemotaxis protein - Pyrococcus
horikoshii >gi|3256884|dbj|BAA29567.1| (AP000002) 277aa
long hypothetical methyl-accepting chemotaxis protein
[Pyrococcus horikoshii]
Length = 277
Score = 83.9 bits (204), Expect = 2e-15
Identities = 57/181 (31%), Positives = 101/181 (55%), Gaps = 25/181 (13%)
Query: 31 SELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEFNTLVQNL 90
S +AE+ GK + +N + + K+SE +E+ +N + L +
Sbjct: 55 SSMAEK--GKEISDNVAL--KVSKISETSREM-----------------SNAISILAEYS 93
Query: 91 EYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIK 150
+ I +I I+S+A QTNL+ALNASIEAARAGEAGRGFAVVA+ +R +A ++ A++I+
Sbjct: 94 KKIDEIVYVISSIASQTNLLALNASIEAARAGEAGRGFAVVAENVRELADRSKKAAEQIR 153
Query: 151 EFNSKVMDQ----LDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFIN 206
+ ++ + ++A+++ +KV + ++E + L I +N + KE + I+
Sbjct: 154 DLIKEMQENTNRVIEAIQENVKVTEEVKEAIQELIAAFDDIARRANETATMVKELSEGID 213
Query: 207 D 207
+
Sbjct: 214 E 214
>pir||H81324 probable MCP-domain signal transduction protein Cj1190c [imported]
- Campylobacter jejuni (strain NCTC 11168)
>gi|6968623|emb|CAB73444.1| (AL139077) putative
MCP-domain signal transduction protein [Campylobacter
jejuni]
Length = 459
Score = 83.9 bits (204), Expect = 2e-15
Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 9/149 (6%)
Query: 5 TLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLS----EIMK 60
T + A L L +K+ S+I S L ++IS M+N + D + +S E
Sbjct: 149 TFKNALSRTLMDLSLGNQNKDMSQISSSLNQDIS--MMKN---VYDTVDAISHTATENGS 203
Query: 61 ELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAAR 120
E+D Q + + T V N + I+ + + I +A QTNL+ALNA+IEAAR
Sbjct: 204 EVDSLQSAMGSLMDVVNSSKETVQTFVANSQNITSVVEVIRDIADQTNLLALNAAIEAAR 263
Query: 121 AGEAGRGFAVVADEIRRMAVQTMNLAKEI 149
AGE GRGFAVVADE+R++A +T EI
Sbjct: 264 AGEHGRGFAVVADEVRKLAERTQRSTSEI 292
>pir||A83451 aerotaxis receptor Aer PA1561 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9947522|gb|AAG04950.1|AE004584_6
(AE004584) aerotaxis receptor Aer [Pseudomonas
aeruginosa]
Length = 521
Score = 83.9 bits (204), Expect = 2e-15
Identities = 67/220 (30%), Positives = 108/220 (48%), Gaps = 14/220 (6%)
Query: 23 SKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANE 82
+++ + V+E+A + N L D QK +E+ E QRL E
Sbjct: 278 TEQVATAVNEMAATTQ-EVANNVQLTADATQKANELTSRGRDIAAETRNAIQRLSESVGE 336
Query: 83 ----FNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRM 138
+ L Q+ I + D I +A QTNL+ALNA+IEAARAG+ GRGFAVVADE+R +
Sbjct: 337 TGAAVSRLAQDSNEIGGVVDVIKGIADQTNLLALNAAIEAARAGDQGRGFAVVADEVRSL 396
Query: 139 AVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDIS 198
A +T ++I +K+ + DA+ M+ G + +Q +++ + L IS
Sbjct: 397 AQRTAASTEQIHHLIAKLQ---NTANDAVHTME---SGLQQAEAGVQRVLEADSALVGIS 450
Query: 199 KEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRL 238
E N + IA A E+ S + + N+ ++++ L
Sbjct: 451 ---EAVSNITEMTTQIAAAAEEQSAVAEEINRNISTIAAL 487
>pir||C72291 methyl-accepting chemotaxis protein - Thermotoga maritima (strain
MSB8) >gi|4981690|gb|AAD36219.1|AE001771_12 (AE001771)
methyl-accepting chemotaxis protein [Thermotoga
maritima]
Length = 530
Score = 83.5 bits (203), Expect = 2e-15
Identities = 67/227 (29%), Positives = 121/227 (52%), Gaps = 31/227 (13%)
Query: 2 NIRT-LEKASGALSHSLRLTVSSKESSKIVSELAEEI--SGKFMENNTLIL----DNIQK 54
NI T +E S ++ + T S+E S +A+ + F + +T + D ++K
Sbjct: 261 NISTRIESISASVQET---TAGSEEISSATKNIADSAQQAASFADQSTQLAKEAGDALKK 317
Query: 55 LSEIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNA 114
+ E+ + + ++ + + A E + V+ +I ++A+QTNL+ALNA
Sbjct: 318 VIEVTRMISNSAKDVERVVESFQKGAEEITSFVE----------TINAIAEQTNLLALNA 367
Query: 115 SIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMD-QLDALRDALKVMDRI 173
+IEAARAGEAGRGFAVVADEIR++A ++ ++ ++ +++ DA + + ++ R+
Sbjct: 368 AIEAARAGEAGRGFAVVADEIRKLAEESQQASENVRRVVNEIRSIAEDAGKVSSEITARV 427
Query: 174 REGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEK 220
EGT++ + LN I E+ IN++ L+ IA A+E+
Sbjct: 428 EEGTKLAD-------EADEKLNSIVGAVER-INEM--LQNIAAAIEE 464
>pir||F81417 MCP-domain signal transduction protein Cj0019c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6967524|emb|CAB72512.1| (AL139074) MCP-domain signal
transduction protein [Campylobacter jejuni]
Length = 592
Score = 83.5 bits (203), Expect = 2e-15
Identities = 64/229 (27%), Positives = 124/229 (53%), Gaps = 29/229 (12%)
Query: 29 IVSELAEEISGKFMENNTLILDNIQ-KLSEIMKELDKFQREFLPFFQRLETFANEFNTLV 87
+ LA+E S + M++ +++D ++ LSE++ +++ ++ + + L
Sbjct: 366 LAGNLAQE-SIENMQDMHILMDKVELTLSELVNLINENN-------EKEQNIVANMDNLT 417
Query: 88 QNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAK 147
Q+ + I +I++SI +A QTNL+ALNA+IEAARAGE GRGFAVVADE+ ++A +T +K
Sbjct: 418 QSADNIIEITNSIKDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVGQLADKT---SK 474
Query: 148 EIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFIND 207
+ N+ V + + D +MD I + + + S+ ND+ Q++ +N
Sbjct: 475 SLLNINATVNTIVQQINDNKALMDLIHDSMK----------ETSSKTNDL---QQELVNS 521
Query: 208 IKRLKGIALALEKFSELQDRYNKELASLLRLLASEYSRSGGDSNGKKAL 256
+ +L+ ++E ++D+ + E+ + +L + + +N K L
Sbjct: 522 MHKLES---SIESTQTMKDK-SMEVKDKMLILGTNIDKVNELANSVKDL 566
>pir||C83080 probable chemotaxis transducer PA4520 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9950762|gb|AAG07908.1|AE004866_2 (AE004866) probable
chemotaxis transducer [Pseudomonas aeruginosa]
Length = 673
Score = 83.5 bits (203), Expect = 2e-15
Identities = 55/197 (27%), Positives = 96/197 (47%), Gaps = 6/197 (3%)
Query: 7 EKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQ 66
+ +G S ++ + + + E+A + N++ + + S + ++ Q
Sbjct: 421 QAVAGQRSQIEQVATAMNQMAATAQEVARSAAMAVSSANSVNQETLSGRSLVESQVGSIQ 480
Query: 67 REFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGR 126
R ++ N L + IS++ D I +A+QTNL+ALNA+IEAARAGE GR
Sbjct: 481 R----LAGEIDQSVAAINRLASDSASISQVLDVIKGIAEQTNLLALNAAIEAARAGEQGR 536
Query: 127 GFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQI 186
GFAVVADE+R +A +T EI++ ++ +DA A+ +GT + Q+
Sbjct: 537 GFAVVADEVRTLAKRTQQSTAEIEQMILRLQGGVDAAVKAMGSSHHTADGT--VNESAQV 594
Query: 187 IVDISNVLNDISKEQEQ 203
+ N+L + +Q
Sbjct: 595 QQALENILGAVGMIVDQ 611
>pir||C64532 methyl-accepting chemotaxis protein (tlpA) - Helicobacter pylori
(strain 26695) >gi|2313179|gb|AAD07167.1| (AE000531)
methyl-accepting chemotaxis protein (tlpA) [Helicobacter
pylori 26695]
Length = 675
Score = 83.1 bits (202), Expect = 3e-15
Identities = 60/208 (28%), Positives = 109/208 (51%), Gaps = 12/208 (5%)
Query: 6 LEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIM-KELDK 64
+E + AL ++ + + SS +LA + + N + N++K S K L +
Sbjct: 466 VELVTNALGQEIQKMLET--SSNFAKDLANDSA-----NLKECVQNLEKASNSQHKSLME 518
Query: 65 FQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA 124
+ ++ +++ +++ + I I + I +A QTNL+ALNA+IEAARAGE
Sbjct: 519 TSKTIENITTSIQGVSSQSEAMIEQGQDIKSIVEIIRDIADQTNLLALNAAIEAARAGEH 578
Query: 125 GRGFAVVADEIRRMAVQTMNLAKEIKE----FNSKVMDQLDALRDALKVMDRIREGTEIL 180
GRGFAVVADE+R++A +T EI+ + D +++++ +K ++ I E L
Sbjct: 579 GRGFAVVADEVRKLAERTQKSLSEIEANINILVQSISDTSESIKNQVKEVEEINASIEAL 638
Query: 181 GRDIQIIVDISNVLNDISKEQEQFINDI 208
+ + I++ +IS+E ++ NDI
Sbjct: 639 RSVTEGNLKIASDSLEISQEIDKVSNDI 666
>pir||A81315 probable MCP-type signal transduction protein Cj1110c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968544|emb|CAB73365.1| (AL139077) putative MCP-type
signal transduction protein [Campylobacter jejuni]
Length = 429
Score = 83.1 bits (202), Expect = 3e-15
Identities = 54/184 (29%), Positives = 100/184 (54%), Gaps = 28/184 (15%)
Query: 24 KESSKIVSELAEEISGKFMENNTLI---LDNIQKLSEIMKELDKFQREFLPFFQRLETFA 80
+E +++SELAE+ + + +I + N+Q ++++M + +
Sbjct: 264 QEKLRLISELAEKNDNLTQDGDRVIENTVSNVQNIADMMSQS-----------------S 306
Query: 81 NEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAV 140
N ++L Q + I I +I+ +A QTNL+ALNA+IEAARAGE GRGFAVVADE+R +A
Sbjct: 307 NLVSSLNQQSDEIKSIIQTISDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRNLAE 366
Query: 141 QTMNLAKEIKEFNSKVMDQLDALRDAL-KVMDRIREGTEILGRDIQIIVDISNVLNDISK 199
+T + EI ++++R+ +V++ I+ G E + + +++ + + I +
Sbjct: 367 RTGHSVNEI-------TTTINSIRNVTSQVVESIKSGLEDVNQSVELAKEARECMEKIRE 419
Query: 200 EQEQ 203
+
Sbjct: 420 SSAE 423
>pir||B83469 probable chemotaxis transducer PA1423 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9947371|gb|AAG04812.1|AE004571_11 (AE004571)
probable chemotaxis transducer [Pseudomonas aeruginosa]
Length = 417
Score = 83.1 bits (202), Expect = 3e-15
Identities = 48/138 (34%), Positives = 79/138 (56%), Gaps = 1/138 (0%)
Query: 68 EFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRG 127
E L L+ + L Q+ + I+ I ++I +A+QTNL+ALNA+IEAARAG+ GRG
Sbjct: 272 EMLKIANTLDASSLNIGELSQHSQQITSIVNTIREIAEQTNLLALNAAIEAARAGDQGRG 331
Query: 128 FAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALK-VMDRIREGTEILGRDIQI 186
FAVVADE+R++A +T KEI + ++ ++ D ++ ++ R G E+
Sbjct: 332 FAVVADEVRQLAERTSKSTKEIADMIGRIQTGTRSVIDDMQHSQEQARRGVELANEAGAA 391
Query: 187 IVDISNVLNDISKEQEQF 204
I+ I + + + +QF
Sbjct: 392 ILGIRESTHKVVEAVQQF 409
>dbj|BAB07619.1| (AP001520) methyl-accepting chemotaxis protein [Bacillus
halodurans]
Length = 579
Score = 83.1 bits (202), Expect = 3e-15
Identities = 54/189 (28%), Positives = 103/189 (53%), Gaps = 6/189 (3%)
Query: 28 KIVSELAEEISGKFMEN----NTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEF 83
KIV +++E+I K EN +T ++ +K S + ++ ++ Q +
Sbjct: 327 KIVGDMSEDIR-KIAENAKEVSTTSMEASEKSSAGKQVIETLVKQMTLINQSVSGLDEII 385
Query: 84 NTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTM 143
+ N + I++I I ++ QTNL+ALNA+IEAARAGEAG+GF+VVADE+R++A QT
Sbjct: 386 KGMRDNSKEINQIVKVITEISDQTNLLALNAAIEAARAGEAGKGFSVVADEVRKLAEQTS 445
Query: 144 NLAKEIKEFNSKVMDQLD-ALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQE 202
AK+I S V + D A++ + + G + + I+ +++++++ +
Sbjct: 446 LSAKQISNLISNVQKETDQAVQSMETTTEEVVSGMGLADTAGESFEHINQTVSEVTRQIQ 505
Query: 203 QFINDIKRL 211
+ ++++
Sbjct: 506 NVSDSVQKV 514
>pir||T44964 transducer protein car [validated] - Halobacterium salinarum
(strain Flx15) >gi|2072795|gb|AAC45264.1| (U74668)
soluble transducer protein HtH [Halobacterium salinarum]
Length = 451
Score = 82.7 bits (201), Expect = 4e-15
Identities = 67/254 (26%), Positives = 115/254 (44%), Gaps = 49/254 (19%)
Query: 31 SELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANE-------- 82
+E E +GK +E D + S ++E+ E QR + A E
Sbjct: 195 AEETEPFAGKEIERMEGFADKVSNQSATIEEIASSAEEVSQASQRAQDRATEGEQTAETA 254
Query: 83 -----------------FNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAG 125
+ L + +S+I D+I +A QTN++ALNASIEAARAGE G
Sbjct: 255 IDRMGAVQESAERVNDTIDGLTSQADEMSEIIDAINDIADQTNMLALNASIEAARAGEKG 314
Query: 126 RGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQ 185
GFAVVADE++ +A ++ A EI++ ++++ D + DRI + T + I
Sbjct: 315 EGFAVVADEVKSLAEESQERADEIEQMIVEMVETTD------QTADRIGQTTTEIEEAIT 368
Query: 186 IIVDISNVLNDISKEQEQFINDIKRLKGIA--------------LALEKFSELQDRYNKE 231
+ + + L +I ++ +K + G A++K +EL+DR
Sbjct: 369 AVRETLDSLQEIRNAVDETATGVKEVAGARDHAASTEQVAATTDEAVDKLTELEDR---- 424
Query: 232 LASLLRLLASEYSR 245
L +L ++ + ++ R
Sbjct: 425 LDNLSQIASEQHDR 438
>pir||B71975 methyl-accepting chemotaxis protein (MCP) - Helicobacter pylori
(strain J99) >gi|4154599|gb|AAD05672.1| (AE001448)
methyl-accepting chemotaxis protein (MCP) [Helicobacter
pylori J99]
Length = 675
Score = 82.7 bits (201), Expect = 4e-15
Identities = 60/208 (28%), Positives = 109/208 (51%), Gaps = 12/208 (5%)
Query: 6 LEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIM-KELDK 64
+E + AL ++ + + SS +LA + + N + N++K S K L +
Sbjct: 466 VELVTNALGQEIQKMLET--SSNFAKDLANDSA-----NLKECVQNLEKASNSQHKSLME 518
Query: 65 FQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA 124
+ ++ +++ +++ + I I + I +A QTNL+ALNA+IEAARAGE
Sbjct: 519 TSKTIENITTSIQGVSSQSEAMIEQGKDIKSIVEIIRDIADQTNLLALNAAIEAARAGEH 578
Query: 125 GRGFAVVADEIRRMAVQTMNLAKEIKE----FNSKVMDQLDALRDALKVMDRIREGTEIL 180
GRGFAVVADE+R++A +T EI+ + D +++++ +K ++ I E L
Sbjct: 579 GRGFAVVADEVRKLAERTQKSLSEIEANINILVQSISDTSESIKNQVKEVEEINASIEAL 638
Query: 181 GRDIQIIVDISNVLNDISKEQEQFINDI 208
+ + I++ +IS+E ++ NDI
Sbjct: 639 RSVTEGNLKIASDSLEISQEIDKVSNDI 666
>pir||G83313 probable chemotaxis transducer PA2652 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9948722|gb|AAG06040.1|AE004694_3 (AE004694) probable
chemotaxis transducer [Pseudomonas aeruginosa]
Length = 561
Score = 82.7 bits (201), Expect = 4e-15
Identities = 44/94 (46%), Positives = 64/94 (67%)
Query: 84 NTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTM 143
++L Q+++ I + I S+A+QTNL+ALNA+IEAARAGEAGRGFAVVADE+R +A +T
Sbjct: 382 DSLQQDVQSIVSVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQ 441
Query: 144 NLAKEIKEFNSKVMDQLDALRDALKVMDRIREGT 177
+EI+ ++ +A DA++ EGT
Sbjct: 442 QSTQEIQGMIDRLQQGTNAAVDAMRRSGEAGEGT 475
>pir||C83012 probable chemotaxis transducer PA5072 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9951365|gb|AAG08457.1|AE004920_7 (AE004920) probable
chemotaxis transducer [Pseudomonas aeruginosa]
Length = 647
Score = 82.7 bits (201), Expect = 4e-15
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 15 HSLRLTVSS-KESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFF 73
H + TV ++++ S+ A + + + + ++ + ++ + E+D
Sbjct: 412 HEMAATVQDVARNAELASQAARQADEEARQGDAVVDQAVTRIERLASEMD---------- 461
Query: 74 QRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVAD 133
+ L E I + D I SVA+QTNL+ALNA+IEAARAG+AGRGFAVVAD
Sbjct: 462 ----VSSEAMARLKNESEQIGSVLDVIKSVAEQTNLLALNAAIEAARAGDAGRGFAVVAD 517
Query: 134 EIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNV 193
E+R +A +T EI+ ++ + A + +R+ + +++
Sbjct: 518 EVRGLAQRTQQSTAEIEGLIQRLQ------QGAGEAAERLENSRSLTASTVELARRAGAA 571
Query: 194 LNDISKEQEQFINDIKRLK-GIALALEKFSELQDRYNKELASL 235
L+ I++ ++DI+ + IA A E+ S + + N+ + S+
Sbjct: 572 LDSITRT----VSDIQNMNLQIATAAEQQSTVAEEINRSVLSV 610
>sp|P39216|TLPA_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN TLPA >gi|1075830|pir||C54078
methyl-accepting chemotaxis protein tlpA - Bacillus
subtilis >gi|459689|gb|AAA20555.1| (L29189)
transmembrane receptor [Bacillus subtilis]
>gi|2635609|emb|CAB15103.1| (Z99119) methyl-accepting
chemotaxis protein [Bacillus subtilis]
>gi|2635621|emb|CAB15114.1| (Z99120) methyl-accepting
chemotaxis protein [Bacillus subtilis]
Length = 662
Score = 82.3 bits (200), Expect = 5e-15
Identities = 51/150 (34%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
I+ I I +A QTNL+ALNA+IEAARAGE GRGF+VVA+E+R++AVQ+ + AKEI+
Sbjct: 476 ITNILRVINGIADQTNLLALNAAIEAARAGEYGRGFSVVAEEVRKLAVQSADSAKEIESL 535
Query: 153 NSKVMDQLDALRDALKVMDR-IREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRL 211
S+++ ++ + L+ +++ + G + Q IS + N I+ E + ++ L
Sbjct: 536 ISEIVKEIHTSLNVLQSVNKEVETGLVMTDETKQSFKHISQMTNQIASELQNMNATVEEL 595
Query: 212 KGIALALEKFSELQDRYNKELASLLRLLAS 241
A + S +KE + ++ +A+
Sbjct: 596 SAGAQEISAASNDITAISKESSDGIQDIAA 625
>pir||S75940 methyl-accepting chemotaxis protein sll0041 - Synechocystis sp.
(strain PCC 6803) >gi|1001300|dbj|BAA10787.1| (D64006)
methyl-accepting chemotaxis protein I [Synechocystis
sp.]
Length = 891
Score = 82.3 bits (200), Expect = 5e-15
Identities = 53/179 (29%), Positives = 95/179 (52%), Gaps = 13/179 (7%)
Query: 80 ANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMA 139
A + L ++ + ISK+ + I S A QTNL+ALNA+IEAA AGE GRGFAVVADE+R +A
Sbjct: 707 AKQVKRLGESSQKISKVVNLIGSFADQTNLLALNAAIEAAHAGEEGRGFAVVADEVRSLA 766
Query: 140 VQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISK 199
Q+ EI + + + + + +V++ + GTE + +++ + LN I+
Sbjct: 767 RQSAEATAEIAQLVATIQAETN------EVVNAMEAGTEQVVVGTKLVEETRRSLNQITA 820
Query: 200 EQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLASEYSRSGGDSNGKKALLR 258
Q + G+ A+ + Q + ++ + + L+A ++ +++G A +
Sbjct: 821 VSAQ-------ISGLVEAITSAAIEQSQTSESVTQTMALVAQIADKNSSEASGVSATFK 872
>pir||F71975 methyl-accepting chemotaxis protein (MCP) - Helicobacter pylori
(strain J99) >gi|4154603|gb|AAD05676.1| (AE001448)
methyl-accepting chemotaxis protein (MCP) [Helicobacter
pylori J99]
Length = 564
Score = 82.3 bits (200), Expect = 5e-15
Identities = 75/268 (27%), Positives = 127/268 (46%), Gaps = 24/268 (8%)
Query: 3 IRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKEL 62
I TL K S + +++T +++S K S + K + +++ +I++ + K L
Sbjct: 292 ISTLNKTS--MDKLVQITQETQKSMKNSSTTLNSVKNKATDIASMMNASIEQSQGLRKRL 349
Query: 63 DKFQ--------------REFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTN 108
+ Q + E +++ L +N + + I D I +A QTN
Sbjct: 350 IETQGLVKESKDAIGDLFSQITESAHTEEELSSKVEQLSRNADDVKSILDIINDIADQTN 409
Query: 109 LVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALK 168
L+ALNA+IEAARAGE GRGFAVVADE+R +A +T K + E NS +M + + D
Sbjct: 410 LLALNAAIEAARAGEHGRGFAVVADEVRNLAGRTQ---KSLAEINSTIMVIVQEINDVSS 466
Query: 169 VMDRIREGTEIL---GRDIQIIVD-ISNVLNDISKEQEQFIND-IKRLKGIALALEKFSE 223
M+ + E L + +Q + +S+ L+ + + Q ++D K I + F+E
Sbjct: 467 QMNLNSQKMERLSDMSKSVQETYEKMSSNLSSVVLDSNQSMDDYAKSGHQIEAMVSDFAE 526
Query: 224 LQDRYNKELASLLRLLASEYSRSGGDSN 251
++ +K LA +L SG N
Sbjct: 527 VEKVASKTLADSSDILNITTHVSGTTMN 554
>pir||H83445 probable chemotaxis transducer PA1608 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9947573|gb|AAG04997.1|AE004588_10 (AE004588)
probable chemotaxis transducer [Pseudomonas aeruginosa]
Length = 541
Score = 82.3 bits (200), Expect = 5e-15
Identities = 54/151 (35%), Positives = 91/151 (59%), Gaps = 11/151 (7%)
Query: 86 LVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNL 145
L + + ISK+ D I +A+QTNL+ALNA+IEAARAGE GRGFAVVADE+R +A +T
Sbjct: 364 LAEKAQDISKVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQES 423
Query: 146 AKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNV-LNDISKEQEQF 204
+EI++ + + + A A+ + + + R++ I + + + LN+I++ Q
Sbjct: 424 TREIEQMIANIQEGTGAAVGAM-------DSSSVRARNMLEIAEAAGLALNEIAERVGQ- 475
Query: 205 INDIKRLKGIALALEKFSELQDRYNKELASL 235
IN+ R IA A E+ +++ ++ L ++
Sbjct: 476 INE--RTLVIASASEQQAQVAREVDRNLVNI 504
>gb|AAG19270.1| (AE005023) Htr18 transducer; Htr18 [Halobacterium sp. NRC-1]
Length = 790
Score = 81.9 bits (199), Expect = 6e-15
Identities = 58/194 (29%), Positives = 104/194 (52%), Gaps = 12/194 (6%)
Query: 6 LEKASGALSHSLR-LTVSSKESSKIVSELAEEIS--GKFMENNTLILDNIQKLSEIMKEL 62
+++ASG +S S++ ++ +++ + IV ++++E++ +E D + S +
Sbjct: 473 VKRASGQVSESVQEMSADARQQNGIVQDVSDEMTDLSATIEEIASSSDEVAAKSNDAVSV 532
Query: 63 DKFQR--------EFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNA 114
+ R E ++ + E L + I +I I +A+QT+++ALNA
Sbjct: 533 GQSGRARSQDAIEEMNAVDEQAKRTIAEMEALDDEMTEIGEIVTLIDDIAEQTSMLALNA 592
Query: 115 SIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQ-LDALRDALKVMDRI 173
SIEAARAGEAG GFAVVADEI+ ++ +T +EI+ + V D DA+ D ++ DR+
Sbjct: 593 SIEAARAGEAGEGFAVVADEIKSLSKETTEATQEIESLIADVQDSTTDAVTDMQEMGDRL 652
Query: 174 REGTEILGRDIQII 187
EG + ++ I
Sbjct: 653 SEGKSTVTDTVETI 666
>sp|Q02755|MCPC_SALTY METHYL-ACCEPTING CHEMOTAXIS CITRATE TRANSDUCER (CITRATE
CHEMORECEPTOR PROTEIN) >gi|421247|pir||A47178
methyl-accepting transmembrane citrate/phenol
chemoreceptor Tcp - Salmonella typhimurium
>gi|154381|gb|AAA27231.1| (L06029) chemoreceptor
[Salmonella typhimurium]
Length = 547
Score = 81.9 bits (199), Expect = 6e-15
Identities = 50/161 (31%), Positives = 89/161 (55%), Gaps = 13/161 (8%)
Query: 76 LETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEI 135
++ + N + ++ E I I+ I +A QTN++ALNA++EAARAGE GRGFAVVA E+
Sbjct: 343 VDNVVSTMNDIAESSEKIVDITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV 402
Query: 136 RRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLN 195
R +A ++ AKEIK + ++D ++RE E + + + +++++
Sbjct: 403 RTLASRSAQAAKEIKVLIENSVSRIDT------GSTQVREAGETMKEIVNAVTRVTDIMG 456
Query: 196 DISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLL 236
+I+ ++ + KGI + SE+ D ++ ASL+
Sbjct: 457 EIASASDE------QSKGIEQVAQAVSEM-DSVTQQNASLV 490
>pir||E82222 methyl-accepting chemotaxis protein VC1248 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655731|gb|AAF94407.1| (AE004204) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 536
Score = 81.9 bits (199), Expect = 6e-15
Identities = 66/269 (24%), Positives = 129/269 (47%), Gaps = 32/269 (11%)
Query: 3 IRTLEKASGALSHSLRLTVSSKESSKIV-------SELAE----------EISGKFMENN 45
+ +++ AS ++R+ S++E+S+ V S+LA +++G +
Sbjct: 259 VESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVAGHAEDTA 318
Query: 46 TLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAK 105
LD ++ + K++ L ++ N L + + IS+++ I+ +++
Sbjct: 319 RDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTSVISGISE 378
Query: 106 QTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRD 165
QTNL+ALNA+IEAARAG+ GRGFAVVADE+R +A +T + EI+ +++ +
Sbjct: 379 QTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTAS 438
Query: 166 ALKVMDRIREGT----EILGRDIQIIVD-----------ISNVLNDISKEQEQFINDIKR 210
A++ + + E G D+ +IV+ I+ + S E+ ++
Sbjct: 439 AMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAEEMNRNVSG 498
Query: 211 LKGIALALEKFSELQDRYNKELASLLRLL 239
+ AL + + + +++LA L R L
Sbjct: 499 INDAALEMSQAATYLAEESEKLADLSRQL 527
>pir||A71978 methyl-accepting chemotaxis protein (MCP) - Helicobacter pylori
(strain J99) >gi|4154575|gb|AAD05650.1| (AE001446)
methyl-accepting chemotaxis protein (MCP) [Helicobacter
pylori J99]
Length = 673
Score = 81.5 bits (198), Expect = 8e-15
Identities = 54/165 (32%), Positives = 83/165 (49%), Gaps = 11/165 (6%)
Query: 55 LSEIMKELDKFQREFLPFFQRLETFAN-------EFNTLVQNLEYISKISDSIASVAKQT 107
+ + K K +R Q LE N + ++ E I + D I +A QT
Sbjct: 500 VDNLTKTAHKQERSLKNTTQSLEEITNIITMIDSKSQEMISQGEDIKSVVDMIRDIADQT 559
Query: 108 NLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKE----FNSKVMDQLDAL 163
NL+ALNA+IEAARAGE GRGFAVVADE+R++A +T EI+ + D +++
Sbjct: 560 NLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANINILVQSIADNAESI 619
Query: 164 RDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDI 208
+ K ++ I L +D+Q + I+N +S + + DI
Sbjct: 620 KMQNKGVENIHNSINALQQDVQDNLTIANHSLQVSTKIDGISQDI 664
>pir||H81431 methyl-accepting chemotaxis signal transduction protein Cj0144
[imported] - Campylobacter jejuni (strain NCTC 11168)
>gi|6967638|emb|CAB72628.1| (AL139074) methyl-accepting
chemotaxis signal transduction protein [Campylobacter
jejuni]
Length = 659
Score = 81.1 bits (197), Expect = 1e-14
Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 25/222 (11%)
Query: 6 LEKASGALSHSLRLTVSS---------KESSKIVSELAEEISGKFMENNTLILDNIQKLS 56
LE ASG S+ LT ++ K+SS + LA E SGK + + +
Sbjct: 443 LENASG----SVELTTNALGDEIVKMLKQSSDFANALANE-SGKLQTAVQSLTTSSNSQA 497
Query: 57 EIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASI 116
+ ++E E Q + ++ ++ E I ++ I +A Q NL+ALNA+I
Sbjct: 498 QSLEETAAALEEITSSMQNVSVKTSD---VITQSEEIKNVTGIIGDIADQINLLALNAAI 554
Query: 117 EAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALK-------- 168
EAARAGE GRGFAVVADE+R++A +T EI+ + ++ ++ + +++K
Sbjct: 555 EAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANTNLLVQSINDMAESIKEQTAGITQ 614
Query: 169 VMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKR 210
+ D + + + +++I + + + + +S + D+K+
Sbjct: 615 INDSVAQIDQTTKDNVEIANESAIISSTVSDIANNILEDVKK 656
>pir||E81444 probable methyl-accepting chemotaxis signal transduction protein
Cj0262c [imported] - Campylobacter jejuni (strain NCTC
11168) >gi|6967739|emb|CAB72730.1| (AL139074) putative
methyl-accepting chemotaxis signal transduction protein
[Campylobacter jejuni]
Length = 665
Score = 81.1 bits (197), Expect = 1e-14
Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 25/222 (11%)
Query: 6 LEKASGALSHSLRLTVSS---------KESSKIVSELAEEISGKFMENNTLILDNIQKLS 56
LE ASG S+ LT ++ K+SS + LA E SGK + + +
Sbjct: 449 LENASG----SVELTTNALGDEIVKMLKQSSDFANALANE-SGKLQTAVQSLTTSSNSQA 503
Query: 57 EIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASI 116
+ ++E E Q + ++ ++ E I ++ I +A Q NL+ALNA+I
Sbjct: 504 QSLEETAAALEEITSSMQNVSVKTSD---VITQSEEIKNVTGIIGDIADQINLLALNAAI 560
Query: 117 EAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALK-------- 168
EAARAGE GRGFAVVADE+R++A +T EI+ + ++ ++ + +++K
Sbjct: 561 EAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANTNLLVQSINDMAESIKEQTAGITQ 620
Query: 169 VMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKR 210
+ D + + + +++I + + + + +S + D+K+
Sbjct: 621 INDSVAQIDQTTKDNVEIANESAIISSTVSDIANNILEDVKK 662
>pir||B81251 probable methyl-accepting chemotaxis signal transduction protein
Cj1564 [imported] - Campylobacter jejuni (strain NCTC
11168) >gi|6968981|emb|CAB73552.1| (AL139079) putative
methyl-accepting chemotaxis signal transduction protein
[Campylobacter jejuni]
Length = 662
Score = 81.1 bits (197), Expect = 1e-14
Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 25/222 (11%)
Query: 6 LEKASGALSHSLRLTVSS---------KESSKIVSELAEEISGKFMENNTLILDNIQKLS 56
LE ASG S+ LT ++ K+SS + LA E SGK + + +
Sbjct: 446 LENASG----SVELTTNALGDEIVKMLKQSSDFANALANE-SGKLQTAVQSLTTSSNSQA 500
Query: 57 EIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASI 116
+ ++E E Q + ++ ++ E I ++ I +A Q NL+ALNA+I
Sbjct: 501 QSLEETAAALEEITSSMQNVSVKTSD---VITQSEEIKNVTGIIGDIADQINLLALNAAI 557
Query: 117 EAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALK-------- 168
EAARAGE GRGFAVVADE+R++A +T EI+ + ++ ++ + +++K
Sbjct: 558 EAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANTNLLVQSINDMAESIKEQTAGITQ 617
Query: 169 VMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKR 210
+ D + + + +++I + + + + +S + D+K+
Sbjct: 618 INDSVAQIDQTTKDNVEIANESAIISSTVSDIANNILEDVKK 659
>pir||B82351 methyl-accepting chemotaxis protein VC0216 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9654623|gb|AAF93392.1| (AE004111) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 564
Score = 81.1 bits (197), Expect = 1e-14
Identities = 66/229 (28%), Positives = 110/229 (47%), Gaps = 18/229 (7%)
Query: 25 ESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEFN 84
E+ K+V+ + E +S E + Q + ++ Q+E + NE N
Sbjct: 320 ETDKVVAAVTE-MSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVN 378
Query: 85 T-------LVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRR 137
L Q I+++ I +A+QTNL+ALNA+IEAARAGE GRGFAVVADE+R
Sbjct: 379 QTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRS 438
Query: 138 MAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDI 197
+A +T N KEI E + + + ++ + E T + +QI ++ + +
Sbjct: 439 LASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTAL--ESVQIKESLAGISKAV 496
Query: 198 SKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLASEYSRS 246
S + I A A E+ S + + N+ L ++ +++ +E S S
Sbjct: 497 SLIHDMGIQ-------TASAAEQQSAVAEDINQNLVAIQQIV-NELSES 537
>pir||F82174 methyl-accepting chemotaxis protein VC1643 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9656156|gb|AAF94794.1| (AE004242) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 596
Score = 81.1 bits (197), Expect = 1e-14
Identities = 50/139 (35%), Positives = 74/139 (52%), Gaps = 15/139 (10%)
Query: 12 ALSHSLRLTVSS-KESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFL 70
A H TV +S+ + +E +EE M+ ++ +NI + + +L K
Sbjct: 358 AAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAM- 416
Query: 71 PFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAV 130
L ++ E I + D I S+++QTNL+ALNA+IEAARAGE GRGFAV
Sbjct: 417 -------------QLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAV 463
Query: 131 VADEIRRMAVQTMNLAKEI 149
VADE+R +A +T K+I
Sbjct: 464 VADEVRTLASRTQESTKQI 482
>pir||F83280 probable chemotaxis transducer PA2920 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949014|gb|AAG06308.1|AE004718_5 (AE004718) probable
chemotaxis transducer [Pseudomonas aeruginosa]
Length = 545
Score = 81.1 bits (197), Expect = 1e-14
Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 30/257 (11%)
Query: 10 SGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQRE- 68
+G + + RL S S VS A ++S E + N Q +++ + + RE
Sbjct: 285 AGMTAANDRLINSEHASVDQVSTAATQMSSAVHE----VARNAQSAAQVADDARRQAREG 340
Query: 69 ----------FLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEA 118
Q +E+ + L Q I + I +A+QTNL+ALNA+IEA
Sbjct: 341 ANVVEATIEVIRQLAQEVESSSESIQQLAQETASIDAVLTVIKGIAEQTNLLALNAAIEA 400
Query: 119 ARAGEAGRGFAVVADEIRRMAVQTMNLAKE----IKEFNSKVMDQLDALRD-ALKVMDRI 173
ARAGE GRGFAVVADE+R +A +T + K+ I+ + V + + A++ +LK D +
Sbjct: 401 ARAGEQGRGFAVVADEVRALAARTQDSTKDIQARIERLQAGVQNAVRAMQSGSLKARDSV 460
Query: 174 REGT----------EILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSE 223
+ +GR + I++ + S+ ++ +I ++ ++ + SE
Sbjct: 461 ERAAGVDGVLAATGDAVGRINDLAAQIASACEEQSRVIDEIARNISEVRELSAQAAEHSE 520
Query: 224 LQDRYNKELASLLRLLA 240
++ L+ L LA
Sbjct: 521 QGTGASRRLSELSSELA 537
>gb|AAG34158.1|AF312879_1 (AF312879) methyl-accepting chemotaxis protein McpX [Sinorhizobium
meliloti]
Length = 788
Score = 81.1 bits (197), Expect = 1e-14
Identities = 59/223 (26%), Positives = 111/223 (49%), Gaps = 32/223 (14%)
Query: 9 ASGALSHSLRLTVSS-KESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQR 67
A+ LSH +S +E++ + EL +++ EN + +++ S ++ + +
Sbjct: 493 AANDLSHRTEQQAASLEETAAALDELTSQVNAS-AENAKVAAKSVEVASSDAEQSGEVVQ 551
Query: 68 EFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRG 127
+ + Q +E ++E +S+I I +A QTNL+ALNA +EAARAG+AG+G
Sbjct: 552 KAIAAMQGIEQSSHE----------VSRIIGVIDEIAFQTNLLALNAGVEAARAGDAGKG 601
Query: 128 FAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRD---- 183
FAVVA E+R +A ++ N AKEIK + Q +REG +++G+
Sbjct: 602 FAVVAQEVRELAQRSANAAKEIKTLINTSAGQ-------------VREGVDLVGKAGGAL 648
Query: 184 ---IQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSE 223
+ +V I+ ++ IS + +K + +++ ++
Sbjct: 649 EKIAEQVVQINGLIRQISSSASEQAVGLKEINSAVNQMDQVTQ 691
>gb|AAC25074.1| (AF044495) MCP homolog [Agrobacterium tumefaciens]
Length = 568
Score = 80.4 bits (195), Expect = 2e-14
Identities = 52/192 (27%), Positives = 102/192 (53%), Gaps = 6/192 (3%)
Query: 22 SSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFAN 81
S E S+ +E E S + +N ++S K + + + + + +
Sbjct: 299 SIAERSRQQAEALTETSRALQVMIAHVAENGARISATEKAVSSARDAAVESGRAIGEAID 358
Query: 82 EFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQ 141
+ + Q+ E I +I +I +A QTNL+ALNA IEAARAG++GRGFAVVA E+R +A +
Sbjct: 359 AMSDIEQSAEQIGRIIGTIDEIAFQTNLLALNAGIEAARAGDSGRGFAVVAQEVRALAQR 418
Query: 142 TMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQ 201
+ + A+EIK Q++ +++++R +E +G ++ + I++++ ++S+
Sbjct: 419 SADAAREIKSLVGSTKTQVEG---GVRMVNRTQEA---IGGVVRQVSGINDMIAEVSRHT 472
Query: 202 EQFINDIKRLKG 213
+++ + G
Sbjct: 473 ADHAGELQSVAG 484
>pir||H82402 methyl-accepting chemotaxis protein VCA0906 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658341|gb|AAF96803.1| (AE004418) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 578
Score = 80.4 bits (195), Expect = 2e-14
Identities = 67/234 (28%), Positives = 110/234 (46%), Gaps = 25/234 (10%)
Query: 6 LEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKF 65
LE A+ A+ S +S+ + E A S + NN+ Q + ++E
Sbjct: 335 LEMAATAMEEMTSALSSVSQSTNMAEEYAG--SAEKEANNSK-----QVFEKTIREFADL 387
Query: 66 QREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAG 125
EF + ++ A E N + + D I ++A+QTNL+ALNA+IEAARAGE G
Sbjct: 388 DGEFQKTSEIIQQLATESNN-------VGNVLDVIKAIAEQTNLLALNAAIEAARAGEQG 440
Query: 126 RGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKV-MDRIREGTEILGRDI 184
RGFAVVADE+R +A +T EI+ S + ++ + ++V D+++ +G
Sbjct: 441 RGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVAN 500
Query: 185 QIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRL 238
+ +V I +I K IA A E+ + D + L+++ L
Sbjct: 501 ESLVAIQGSAKEIHKLN----------TSIAAATEEQLTVSDEISSNLSTIKTL 544
>pir||F82392 methyl-accepting chemotaxis protein VCA0988 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658429|gb|AAF96884.1| (AE004425) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 518
Score = 80.4 bits (195), Expect = 2e-14
Identities = 52/163 (31%), Positives = 96/163 (57%), Gaps = 13/163 (7%)
Query: 75 RLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADE 134
+++T ++ L I ++ + I S+A+QTNL+ALNA+IEAARAG+ GRGFAVVADE
Sbjct: 329 QMKTASSVIEQLSSQSAMIGQVMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADE 388
Query: 135 IRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQI-IVDISNV 193
+R++A ++ KEI+E + + + R+A++ +++ G + + VD +++
Sbjct: 389 VRKLAQRSTESTKEIQEVITSIQ---TSTRNAVETIEQ--------GNKLSVSCVDNAHL 437
Query: 194 LNDISKEQEQFINDI-KRLKGIALALEKFSELQDRYNKELASL 235
D ++DI R + IA A+E+ + + + N+ + S+
Sbjct: 438 SGDKLTALLSQVSDITMRNEQIATAIEEMANVTEDMNRSVQSI 480
>pir||F82383 methyl-accepting chemotaxis protein VCA1056 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658501|gb|AAF96950.1| (AE004431) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 770
Score = 80.4 bits (195), Expect = 2e-14
Identities = 44/153 (28%), Positives = 86/153 (55%), Gaps = 1/153 (0%)
Query: 63 DKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAG 122
++ R+ Q++ + L + I+ + D I ++A+QTNL+ALNA+IEAARAG
Sbjct: 570 NELARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAG 629
Query: 123 EAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDAL-KVMDRIREGTEILG 181
E GRGFAVVADE+R +A +T +EI+ ++ + ++ + + + + + G
Sbjct: 630 EQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCH 689
Query: 182 RDIQIIVDISNVLNDISKEQEQFINDIKRLKGI 214
+ ++ I ++LN++++ Q ++ +G+
Sbjct: 690 SNTDMLKQIVDMLNELNEMNIQIATATEQQRGV 722
>pir||E83325 probable chemotaxis transducer PA2561 [imported] - Pseudomonas
aeruginosa (strain PAO1) >gi|8307680|dbj|BAA96488.1|
(AB039332) chemotactic transducer CtpH [Pseudomonas
aeruginosa] >gi|9948621|gb|AAG05949.1|AE004684_4
(AE004684) probable chemotaxis transducer [Pseudomonas
aeruginosa]
Length = 568
Score = 80.0 bits (194), Expect = 2e-14
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 23/208 (11%)
Query: 34 AEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYI 93
A+E ++ + I+ + E+ KE+D + ++LE+ + I
Sbjct: 353 ADEADDSAQRGEDVMEETIRSIGEMRKEID----HTVEVIRQLESDSGR----------I 398
Query: 94 SKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFN 153
K+ D I +A+QTNL+ALNA+IEAARAG+AGRGFAVVADE+R +A +T EI +
Sbjct: 399 GKVLDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRTLAQRTAESIAEIHQII 458
Query: 154 SKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKG 213
V + A+ I G + + + +L I+ E I D+ R
Sbjct: 459 DTVQN------GAVNAARAIESGQSRSEAGAEQVANAGAMLRQITASVES-IRDMNR--Q 509
Query: 214 IALALEKFSELQDRYNKELASLLRLLAS 241
IA A E+ + + + ++ L + + +S
Sbjct: 510 IATAAEEQTAVAEEISRNLTEIASIASS 537
>pir||D82393 methyl-accepting chemotaxis protein VCA0979 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658419|gb|AAF96875.1| (AE004424) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 294
Score = 80.0 bits (194), Expect = 2e-14
Identities = 65/226 (28%), Positives = 112/226 (48%), Gaps = 22/226 (9%)
Query: 3 IRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKEL 62
+ T+ A+ L+HS+ + V+E AE+ N T + DN+ + E+
Sbjct: 51 LETIAAAATELNHSVATVAQT------VNETAEQAL-----NATRLTDNV------VHEI 93
Query: 63 DKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAG 122
+ + E + L+ E I+ + + I +++QTNL+ALNA+IEAARAG
Sbjct: 94 GSATSDISNMCNEMVRVNQEMSKLLIEGEKITTVLNVINDISEQTNLLALNAAIEAARAG 153
Query: 123 EAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGT-EILG 181
E GRGFAVVADE+R +AV+T ++IK + + + + + L M + E T E +
Sbjct: 154 EQGRGFAVVADEVRNLAVKTSQSTEQIKANITNLNRATNTVEEELTRMTGLLEKTAEKVS 213
Query: 182 RDIQIIVDISNVLNDISKEQEQFINDIKR----LKGIALALEKFSE 223
I ++ + + IS+ +Q ++ I+LA+ + SE
Sbjct: 214 HSQSSIRNVKSSVEMISERSDQIHQSAAEQRTAIEEISLAIVEASE 259
>dbj|BAB04595.1| (AP001510) methyl-accepting chemotaxis protein [Bacillus
halodurans]
Length = 560
Score = 80.0 bits (194), Expect = 2e-14
Identities = 69/287 (24%), Positives = 139/287 (48%), Gaps = 50/287 (17%)
Query: 4 RTLEKASGALSHSLRLTVSSKESSKIVSELAEEIS----GKFMENNTL--ILDNIQKLSE 57
R L+ A S +L+ S++++S + I G M+ + + ++++++
Sbjct: 256 RILQNADQVAVSSEQLSASAEQTSSATEQTTSAIESISRGADMQTSAAQTSVKTLEEMNQ 315
Query: 58 IMKELDKFQREFLPFFQRLETFANEFNTLVQNL-------------------------EY 92
I+ E+ ++ T+ANE +TLV+ E
Sbjct: 316 IVTEMTDGAKQIESNANLTLTYANEGDTLVKETVENMQSIDESVKGSDQAIQTLSKRSED 375
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
I +I D I S+A+QTNL+ALNA+IEAARAGE G+GFAVVA+E+R++A ++ K+I +
Sbjct: 376 IVEILDVIQSIAEQTNLLALNAAIEAARAGEHGKGFAVVAEEVRKLAEESSQSTKKIHDL 435
Query: 153 NSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLK 212
+++ + + ++++ M ++E ++S L ++ E+F + + ++
Sbjct: 436 IDEMVKETN---NSVEKMGLVKE-------------EVSVGLKTAAQTSEKFHSIVASIQ 479
Query: 213 GIALALEKFSELQDRY---NKELASLLRLLASEYSRSGGDSNGKKAL 256
G+ +E + + + E+A+ ++ +AS S S+ A+
Sbjct: 480 GVTSQVEAMNRVTREVAEKSTEVATSVQNMASVAEESAEQSSSVSAV 526
>sp|Q02929|CPS_CLOTM PUTATIVE SENSORY TRANSDUCER PROTEIN >gi|477735|pir||B47704 probable
sensory transducer protein - Clostridium thermocellum
>gi|144913|gb|AAA20891.1| (L04736) sensory transducer
protein [Clostridium thermocellum]
Length = 557
Score = 79.6 bits (193), Expect = 3e-14
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 21/247 (8%)
Query: 16 SLRLTVSSKESSKIVSELAEEISGKFMENNTLI----LDNIQKLSEIMKE-LDKFQREFL 70
S++L+ + E + + EL + + N T + + +L+E+ K ++ ++
Sbjct: 258 SMQLSQGATEQASSIEELTASLEQ--VANQTQLSAKNANQANELAEVAKNNAEQGNKQMA 315
Query: 71 PFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAV 130
+E E N N+ I K+ D IA QTN++ALNA++EAARAG+ G+GFAV
Sbjct: 316 EMLNAME----EINNSSSNISRIIKVIDEIAF---QTNILALNAAVEAARAGQHGKGFAV 368
Query: 131 VADEIRRMAVQTMNLAKEIKEFNSKVMDQLD----ALRDALKVMDRIREGTEILGRDIQI 186
VA+E+R +A ++ N AKE E + + + R+ + +++I EG + + +
Sbjct: 369 VAEEVRNLAARSANAAKETTELIEGTIKRTENGTKIARETAEALNKIVEG---ISKAATL 425
Query: 187 IVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLASEYSRS 246
+ DI+ N+ + Q I ++ + SE ++EL+S LL ++
Sbjct: 426 VNDIAVASNEQAAAITQINQGIAQVSQVVQTNSATSEESAAASEELSSQAELLKRSIAKF 485
Query: 247 GGDSNGK 253
+ GK
Sbjct: 486 KLKNMGK 492
>pir||G36943 chemoreceptor protein dcrG - Desulfovibrio vulgaris (strain
Hildenborough) (fragment) >gi|415694|gb|AAA23361.1|
(L26016) chemoreceptor [Desulfovibrio vulgaris]
Length = 94
Score = 79.6 bits (193), Expect = 3e-14
Identities = 38/60 (63%), Positives = 51/60 (84%)
Query: 91 EYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIK 150
E I +I + I+ +A QTNL+ALNA+IEAARAGEAGRGFAVVADE+R++A +TMN +E++
Sbjct: 8 ESIGQIMNVISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMNATQEVR 67
>sp|Q52877|YCH1_RHIME HYPOTHETICAL 57.4 KDA PROTEIN IN CHEY1 5'REGION (ORF1)
>gi|2120807|pir||S61831 hypothetical protein 1 -
Rhizobium meliloti >gi|534834|gb|AAA86671.1| (U13166)
ORF1 [Sinorhizobium meliloti]
Length = 533
Score = 79.6 bits (193), Expect = 3e-14
Identities = 54/145 (37%), Positives = 80/145 (54%), Gaps = 24/145 (16%)
Query: 91 EYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIK 150
E I +I I +A QTNL+ALNA IEAARAGE+GRGFAVVA E+R +A ++ A+EIK
Sbjct: 334 EKIGQIIGVIDEIAFQTNLLALNAGIEAARAGESGRGFAVVAQEVRALAQRSGEAAREIK 393
Query: 151 EFNSKVMDQLDALRDALKVMDRIREGTEILGRD-------IQIIVDISNVLNDISKEQEQ 203
+ + Q+ A G EI+GR + +V I+ + I++E E
Sbjct: 394 QLVTGTKGQVVA-------------GVEIVGRTQHAISSIAEQVVSINEAVTGIAREAEC 440
Query: 204 FINDI----KRLKGIALALEKFSEL 224
+ND+ + G+A A+ + + L
Sbjct: 441 QVNDLASATSEIGGVAQAMNRSAAL 465
>pir||A83314 probable chemotaxis transducer PA2654 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9948724|gb|AAG06042.1|AE004694_5 (AE004694) probable
chemotaxis transducer [Pseudomonas aeruginosa]
Length = 714
Score = 79.6 bits (193), Expect = 3e-14
Identities = 50/146 (34%), Positives = 82/146 (55%), Gaps = 11/146 (7%)
Query: 76 LETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEI 135
L + + L + E I + + I ++A+QTNL+ALNA+IEAARAG+AGRGFAVVADE+
Sbjct: 527 LTSAMGQVEQLASSSEEIGSVLEVIRAIAEQTNLLALNAAIEAARAGDAGRGFAVVADEV 586
Query: 136 RRMAVQTMNLAKEIK----EFNSKVMDQLDAL----RDALKVMDRIREGTEIL---GRDI 184
R +A +T + ++I+ D +DA+ R A ++++ E L G +
Sbjct: 587 RNLARRTQDSVEQIRGVIEGLQQGTRDVVDAMHGSHRQAQGSVEQVDEAVAALQRIGEAV 646
Query: 185 QIIVDISNVLNDISKEQEQFINDIKR 210
+I D++ + ++EQ +I R
Sbjct: 647 TVINDMNLQIASAAEEQSSVAEEINR 672
>dbj|BAB07622.1| (AP001520) methyl-accepting chemotaxis protein [Bacillus
halodurans]
Length = 695
Score = 79.6 bits (193), Expect = 3e-14
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 15/155 (9%)
Query: 75 RLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADE 134
++ T +L + E I I I+S+A QTNL+ALNA+IEAARAGE G+GFAVVA+E
Sbjct: 493 QVRTSVESVKSLGERSEEIGSIVTDISSIADQTNLLALNAAIEAARAGEHGKGFAVVAEE 552
Query: 135 IRRMAVQTMNLAKEIKE----FNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIV-- 188
+R++A Q+ A +I + + + + + L + R E + +GR ++ IV
Sbjct: 553 VRKLAAQSAESADKITQLVGGIQGETKEIVQLIEQNLVSVQRQMEYIQEVGRSLREIVHH 612
Query: 189 ---------DISNVLNDISKEQEQFINDIKRLKGI 214
D+++VL + E ++ I+ + I
Sbjct: 613 TEGTKEQSQDMNSVLTQVLNHAETVLSSIEEISSI 647
>sp|P54576|MCPC_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPC >gi|7475621|pir||A69656
methyl-accepting chemotaxis protein mcpC - Bacillus
subtilis >gi|1280446|emb|CAA66052.1| (X97385)
methyl-accepting chemotaxis protein [Bacillus subtilis]
>gi|2633766|emb|CAB13268.1| (Z99111) methyl-accepting
chemotaxis protein [Bacillus subtilis]
Length = 654
Score = 79.2 bits (192), Expect = 4e-14
Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 22/235 (9%)
Query: 7 EKASGALSHSLRLTVSSKESSKI---VSELAEEISG---KFMENNTLILDNIQKLSEIMK 60
E A+GA + + +++S + + ++AEE G + + + L +++
Sbjct: 385 EVAAGASEQASEVETINEKSESLSTKIRQIAEEAGGIKERSKSSEDASYKGLHALGQLLM 444
Query: 61 ELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAAR 120
+ ++ E ++ ET + +N+E ++ +I++++ QTNL+ALN SIEAAR
Sbjct: 445 KSNEANMET----KKEETMLLDLENQTKNIE---EVVTAISNISDQTNLLALNRSIEAAR 497
Query: 121 AGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEIL 180
AGE+GRGFAVVADE+R++A Q+ K I E + + A+ R+ +
Sbjct: 498 AGESGRGFAVVADEVRKLAEQSALSTKHISETVKLIQLETKEASHAMVEASRMND----- 552
Query: 181 GRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASL 235
I + VLN I+ E + + I I +++ SE Q ++ + S+
Sbjct: 553 -EQNSAIHETGEVLNTITAEMQSLVQGIDH---IYAEIQRMSEEQLAISEAIQSI 603
>sp|Q48316|HTR3_HALSA HALOBACTERIAL TRANSDUCER PROTEIN III >gi|1435129|emb|CAA64840.1|
(X95588) halobacterial transducer protein III
[Halobacterium salinarum]
Length = 481
Score = 79.2 bits (192), Expect = 4e-14
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 77 ETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIR 136
++ ++ L +E I ++ D I +A+QTN++ALNASIEAARAGE G GFAVVA+E++
Sbjct: 294 DSVTSDVEALQNRIEDIDEVVDVITGIAEQTNMLALNASIEAARAGEVGEGFAVVAEEVK 353
Query: 137 RMAVQTMNLAKEIKEFNSKVM-DQLDALRDALKVMDRIREGT----EILGRDIQIIVDIS 191
+A + A I+ S++ D D + D + DRI + + + +I+ +
Sbjct: 354 ALAEDAQSNAGHIESLVSEIQRDTADTVTDLVTTTDRIEDAVAQVEDAMASFEEIVTAVE 413
Query: 192 NVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLL 236
I + + + IA +++ ++L D +A ++
Sbjct: 414 ATAEGIEQVSDATNEQAASAEEIAAMVDETADLADDITTAVADIV 458
>pir||A82320 methyl-accepting chemotaxis protein VC0449 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9654874|gb|AAF93622.1| (AE004132) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 541
Score = 79.2 bits (192), Expect = 4e-14
Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 7/140 (5%)
Query: 19 LTVSSKESSKIVSELAEEISGKFMENNTLILD---NIQKLSEIMKELDKFQREFLPFFQR 75
LT S ++S+ +++ E++ + D N + + + K + Q
Sbjct: 288 LTDSQQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQG 347
Query: 76 LETFANEFNTLVQNLEY----ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVV 131
L T +T V +L+ I+K+ D I +A+QTNL+ALNA+IEAARAGE GRGFAVV
Sbjct: 348 LATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVV 407
Query: 132 ADEIRRMAVQTMNLAKEIKE 151
ADE+R +A +T KEI++
Sbjct: 408 ADEVRNLAGRTQTSTKEIQQ 427
>pir||B82204 methyl-accepting chemotaxis protein VC1413 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655909|gb|AAF94570.1| (AE004219) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 578
Score = 79.2 bits (192), Expect = 4e-14
Identities = 59/238 (24%), Positives = 115/238 (47%), Gaps = 16/238 (6%)
Query: 2 NIRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKE 61
N+ TL + + ++ S+ +++ A++ + N ++ Q ++E +
Sbjct: 323 NLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNS 382
Query: 62 LDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARA 121
++ + + + A + ++ + I+ + I ++A+QTNL+ALNA+IEAARA
Sbjct: 383 VNGLVNQ-------VSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARA 435
Query: 122 GEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILG 181
GE GRGFAVVADE+R +A +T +I N + + +K MD R E
Sbjct: 436 GEQGRGFAVVADEVRALASRTQQSTSQI---NDMLATLKTTTENVVKEMDSTRIHCEETA 492
Query: 182 RDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLL 239
++D NV+ D E +N++ L IA + + ++ +K +A++ ++
Sbjct: 493 ERTNHVMDSLNVVTDSVAE----MNNLNTL--IATSAMEQRQVTHEVSKNMAAIQEMV 544
>dbj|BAB07582.1| (AP001520) methyl-accepting chemotaxis protein [Bacillus
halodurans]
Length = 559
Score = 79.2 bits (192), Expect = 4e-14
Identities = 55/179 (30%), Positives = 98/179 (54%), Gaps = 11/179 (6%)
Query: 7 EKASGALSHSLRLTVSSKESSKIVSELA---EEISGKFMENNTLILDNIQKLSEIMKELD 63
E++ + + +++KE S V + ++S K E + D + + ++++D
Sbjct: 293 EQSMDTVDRAKASVIAAKEMSAGVERITFATADVSIKADEAASHAEDGERSIERAIEQMD 352
Query: 64 KFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGE 123
Q Q+ TF + L + I I + I S+A+QTNL+ALNA+IEAARAGE
Sbjct: 353 TAQHSV----QQSATFIKQ---LGERSSEIGSILELIHSIAEQTNLLALNAAIEAARAGE 405
Query: 124 AGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKV-MDQLDALRDALKVMDRIREGTEILG 181
G+GFAVVADE+R++A ++ A +I + + + D A+++ K + +GT+++G
Sbjct: 406 HGKGFAVVADEVRKLAEESGRSANQISKMLATIQQDTEKAIQEMDKGQVEVEKGTKVVG 464
>sp|P39209|TLPC_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN TLPC >gi|2127141|pir||I40496
methylation enzyme tlpC - Bacillus subtilis
>gi|496484|emb|CAA83970.1| (Z34005) tlpC [Bacillus
subtilis]
Length = 573
Score = 78.8 bits (191), Expect = 5e-14
Identities = 62/197 (31%), Positives = 95/197 (47%), Gaps = 10/197 (5%)
Query: 9 ASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQ----KLSEIMKELDK 64
A+GA R+ +S+ S K S +IS N I D Q K KE+
Sbjct: 299 ANGAQDQITRIE-NSESSLKQASADIRDISA----NTAAIADKGQLAQSKADIGQKEIAN 353
Query: 65 FQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA 124
Q + Q ++ + L + I +I I +A QTNL+ALNA+IEAARAGE
Sbjct: 354 VQAQMDAIHQSIQKSGEIIHQLDGRSKQIEQILSVITQIADQTNLLALNAAIEAARAGEQ 413
Query: 125 GRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLD-ALRDALKVMDRIREGTEILGRD 183
G+GFAVVADE+R++A ++ A +I + ++ ++ + R V EG ++ R
Sbjct: 414 GKGFAVVADEVRKLAEESQQSAGQISKLIIEIQKDMNRSARSVEHVKTEAAEGVTMIQRT 473
Query: 184 IQIIVDISNVLNDISKE 200
+I+ +IS E
Sbjct: 474 RDAFKEIAAATGEISAE 490
>pir||S72163 methyl-accepting chemotaxis protein mcpA - Rhizobium leguminosarum
bv. viciae plasmid >gi|780656|gb|AAC44311.1| (U23040)
chemoreceptor protein [Rhizobium leguminosarum bv.
viciae]
Length = 639
Score = 78.8 bits (191), Expect = 5e-14
Identities = 45/118 (38%), Positives = 72/118 (60%), Gaps = 3/118 (2%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
IS I I +A QTNL+ALNA +EAAR+GEAG+GFAVVA E+R +A ++ + AKEIK+
Sbjct: 439 ISSIVGVIDEIAFQTNLLALNAGVEAARSGEAGKGFAVVAQEVRELAQRSAHAAKEIKDL 498
Query: 153 NSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKR 210
+++ +D + +K++ E +I+ I +I + + S EQ + ++ R
Sbjct: 499 ---ILNSVDEVSSGVKLVRDTGEALKIIVDQIVLINTQLDAVTAASNEQSATLFEVNR 553
>emb|CAA70726.1| (Y09534) methyl-accepting chemotaxis proteins [Rhizobium
leguminosarum]
Length = 639
Score = 78.8 bits (191), Expect = 5e-14
Identities = 45/118 (38%), Positives = 72/118 (60%), Gaps = 3/118 (2%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
IS I I +A QTNL+ALNA +EAAR+GEAG+GFAVVA E+R +A ++ + AKEIK+
Sbjct: 439 ISSIVGVIDEIAFQTNLLALNAGVEAARSGEAGKGFAVVAQEVRELAQRSAHAAKEIKDL 498
Query: 153 NSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKR 210
+++ +D + +K++ E +I+ I +I + + S EQ + ++ R
Sbjct: 499 ---ILNSVDEVSSGVKLVRDTGEALKIIVDQIVLINTQLDAVTAASNEQSATLFEVNR 553
>pir||E83032 probable chemotaxis transducer PA4915 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9951192|gb|AAG08300.1|AE004904_8 (AE004904) probable
chemotaxis transducer [Pseudomonas aeruginosa]
Length = 541
Score = 78.8 bits (191), Expect = 5e-14
Identities = 45/97 (46%), Positives = 65/97 (66%), Gaps = 5/97 (5%)
Query: 84 NTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTM 143
+TL + IS + + I ++A+QTNL+ALNA+IEAARAGEAGRGFAVVADE+R +A T
Sbjct: 362 DTLRNKTDEISTVLEVIQNIAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLATNTH 421
Query: 144 NLAKEIKEFNSKVMDQLDA-LRDALKVMDRIREGTEI 179
+ I+E +++ L A A+ VM + RE ++
Sbjct: 422 KATETIRE----MIEALQAGASSAVSVMQQSREQAQV 454
>gb|AAG19717.1| (AE005058) Htr9 transducer; Htr9 [Halobacterium sp. NRC-1]
Length = 481
Score = 78.8 bits (191), Expect = 5e-14
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 77 ETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIR 136
++ ++ L +E I ++ D I +A+QTN++ALNASIEAARAGE G GFAVVA+E++
Sbjct: 294 DSVTSDVEALQNRIEDIDEVVDVITGIAEQTNMLALNASIEAARAGEEGEGFAVVAEEVK 353
Query: 137 RMAVQTMNLAKEIKEFNSKVM-DQLDALRDALKVMDRIREGT----EILGRDIQIIVDIS 191
+A + A I+ S++ D D + D + DRI + + + +I+ +
Sbjct: 354 ALAEDAQSNAGHIESLVSEIQRDTADTVTDLVTTTDRIEDAVAQVEDAMASFEEIVTAVE 413
Query: 192 NVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLL 236
I + + + IA +++ ++L D +A ++
Sbjct: 414 ATAEGIEQVSDATNEQAASAEEIAAMVDETADLADDITTAVADIV 458
>gb|AAG19801.1| (AE005064) Htr10 transducer; Htr10 [Halobacterium sp. NRC-1]
Length = 489
Score = 78.8 bits (191), Expect = 5e-14
Identities = 48/154 (31%), Positives = 86/154 (55%), Gaps = 19/154 (12%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
+ ++ I +A+QTN++ALNASIEAARAGEAG GFAVVADE++ +A ++ + ++E
Sbjct: 320 VESVTGVIDDIAEQTNMLALNASIEAARAGEAGEGFAVVADEVKALAEESREQSTRVEEL 379
Query: 153 -------NSKVMDQLDALRDAL-KVMDRIREGTEILGRDIQIIVDISNVLNDIS------ 198
+ +DQLD + + + ++R+ E E L + D ++ + ++S
Sbjct: 380 VEQMQAETEETVDQLDEVNQRIGEGVERVEEAMETLQEITDAVEDAASGMQEVSTATDEQ 439
Query: 199 ----KEQEQFINDIKRLKG-IALALEKFSELQDR 227
+E + ++D+ G IA AL+ ++ D+
Sbjct: 440 AVSTEEVAEMVDDVDDRAGEIAAALDDIADATDQ 473
>gb|AAB69316.1| (AF012922) methyl-accepting chemotaxis protein [Treponema
denticola]
Length = 729
Score = 78.4 bits (190), Expect = 7e-14
Identities = 64/248 (25%), Positives = 122/248 (48%), Gaps = 44/248 (17%)
Query: 3 IRTLEKASGALSH---SLRL-TVSSKESSKIVSELAEEIS--GKFMENNTLILDNIQKLS 56
+ T+E+ +G LS S+ + T S ESS +++ +AE K ++ N ++ + +
Sbjct: 448 VATVEQINGRLSRLVSSIEMQTESINESSVVITRMAENTVKIAKTLDQNNELIKTVYGQT 507
Query: 57 EIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASI 116
++ K+ + E + E + ++QN +A QTNL+A+NA+I
Sbjct: 508 KVGKDGARTANEIVKQIAEKSASLLEASQIIQN-------------IASQTNLLAMNAAI 554
Query: 117 EAARAGEAGRGFAVVADEIRRMA----VQTMNLAKEIKEFNSKVMDQLDALRDALKVMDR 172
EAA AGE+G+GFAVVADEIR++A +Q +A IKE +
Sbjct: 555 EAAHAGESGKGFAVVADEIRKLAEGSNLQGKQIAAVIKE-----------------TTEI 597
Query: 173 IREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRL----KGIALALEKFSELQDRY 228
I + TE R + +D+ N+++ IS++++ + ++ K + A+++ +++
Sbjct: 598 IHDITEAGSRAEKTFIDVYNLVSQISEKEDSILEVMREQEENGKHVLDAIKRINDVTSEI 657
Query: 229 NKELASLL 236
+ A +L
Sbjct: 658 DSASAEML 665
>pir||H71917 methyl-accepting chemotaxis protein (MCP) - Helicobacter pylori
(strain J99) >gi|4155097|gb|AAD06131.1| (AE001487)
methyl-accepting chemotaxis protein (MCP) [Helicobacter
pylori J99]
Length = 433
Score = 78.4 bits (190), Expect = 7e-14
Identities = 46/122 (37%), Positives = 74/122 (59%), Gaps = 4/122 (3%)
Query: 32 ELAEEISGKFMENNTLILDNIQKLSEIMKE----LDKFQREFLPFFQRLETFANEFNTLV 87
E A+E F + L+L+ + E E ++K ++ +++++ + ++L
Sbjct: 125 ENAQESMQYFHQETGLLLNAAKNGEEHSNEGLITVNKTGQDIESLYEKMQNATSLADSLN 184
Query: 88 QNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAK 147
Q I+++ I +A+QTNL+ALNA+IEAARAGE GRGFAVVADE+R++A +T K
Sbjct: 185 QRSNEITQVISLIDDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAEKTQKATK 244
Query: 148 EI 149
EI
Sbjct: 245 EI 246
>pir||C82314 methyl-accepting chemotaxis protein VC0512 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9654939|gb|AAF93682.1| (AE004137) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 529
Score = 78.4 bits (190), Expect = 7e-14
Identities = 61/206 (29%), Positives = 106/206 (50%), Gaps = 25/206 (12%)
Query: 52 IQKLSEIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVA 111
+ + S+ + EL+ + LE +N+ ISK+ + I S+A QTNL+A
Sbjct: 325 VSQASQSITELEHEVSQAKQVIHELEEHSND----------ISKVLEVIRSIADQTNLLA 374
Query: 112 LNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMD 171
LNA+IEAARAGE+GRGFAVVADE+R +A +T +I+ +D L+ K+
Sbjct: 375 LNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQR-------MIDTLQGRAKLAV 427
Query: 172 RIRE-GTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLK-GIALALEKFSELQDRYN 229
+ E ++ ++ ++ L I K ++DI + +A A+++ S + D N
Sbjct: 428 AVMEHSSQQALLSVEQAQQAADALTGIGKR----VSDITGMSVQMATAVDQQSAVSDEIN 483
Query: 230 KELASLLRLLASEYSRSGGDSNGKKA 255
++++ +A++ + G N K A
Sbjct: 484 HSISNI--RMAADTNVDNGKINAKCA 507
>pir||C82433 methyl-accepting chemotaxis protein VCA0658 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658074|gb|AAF96559.1| (AE004395) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 536
Score = 78.4 bits (190), Expect = 7e-14
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 1/174 (0%)
Query: 25 ESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEFN 84
+++ V AE +S + LI +E ++ + + E+ A
Sbjct: 297 QATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTL 356
Query: 85 TLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMN 144
L + + ++ I +A+QTNL+ALNA+IEAARAGE GRGFAVVADE+R ++ +T
Sbjct: 357 KLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQR 416
Query: 145 LAKEIKEFNSKVMDQLDALR-DALKVMDRIREGTEILGRDIQIIVDISNVLNDI 197
++I+ ++ ++A R D D+ + + +Q + D+ V++D+
Sbjct: 417 ATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDM 470
>dbj|BAA06432.1| (D30762) methyl-accepting chemotaxis protein TlpC [Bacillus
subtilis] >gi|1805416|dbj|BAA08978.1| (D50453)
methyl-accepting chemotaxis protein of B. subtilis
[Bacillus subtilis] >gi|2632630|emb|CAB12138.1| (Z99105)
methyl-accepting chemotaxis protein [Bacillus subtilis]
Length = 573
Score = 78.0 bits (189), Expect = 9e-14
Identities = 62/197 (31%), Positives = 95/197 (47%), Gaps = 10/197 (5%)
Query: 9 ASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQ----KLSEIMKELDK 64
A+GA R+ +S+ S K S +IS N I D Q K KE+
Sbjct: 299 ANGAQDQITRIE-NSESSLKQASADIRDISA----NTAPIADKGQLAQSKADIGQKEIAN 353
Query: 65 FQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA 124
Q + Q ++ + L + I +I I +A QTNL+ALNA+IEAARAGE
Sbjct: 354 VQAQMDAIHQSIQKSGEIIHQLDGRSKQIEQILSVITQIADQTNLLALNAAIEAARAGEQ 413
Query: 125 GRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLD-ALRDALKVMDRIREGTEILGRD 183
G+GFAVVADE+R++A ++ A +I + ++ ++ + R V EG ++ R
Sbjct: 414 GKGFAVVADEVRKLAEESQQSAGQISKLIIEIQKDMNRSARSVEHVKTEAAEGVTMIQRT 473
Query: 184 IQIIVDISNVLNDISKE 200
+I+ +IS E
Sbjct: 474 RDAFKEIAAATGEISAE 490
>gb|AAB50497.1| (U30319) DcrH [Desulfovibrio vulgaris]
Length = 959
Score = 78.0 bits (189), Expect = 9e-14
Identities = 41/99 (41%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
Query: 74 QRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVAD 133
+R+E L + + I K+ I+ +A QTNL+ALNA+IEAARAG+AGRGFAVVAD
Sbjct: 624 ERIERLNTAMARLGEEADSIGKVMSVISDIADQTNLLALNAAIEAARAGDAGRGFAVVAD 683
Query: 134 EIRRMAVQTMNLAKEIKEFNSKVM----DQLDALRDALK 168
E+R++A +TM E+ +++ D + A+ A++
Sbjct: 684 EVRKLAEKTMQATGEVGSAVTRIQTHTRDNIAAVETAMR 722
>pir||T44606 transducer protein htpIV [similarity] - Halobacterium salinarum
>gi|1654427|gb|AAB17884.1| (U75439) transducer HtF
protein [Halobacterium salinarum]
Length = 804
Score = 78.0 bits (189), Expect = 9e-14
Identities = 60/219 (27%), Positives = 115/219 (52%), Gaps = 27/219 (12%)
Query: 7 EKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLI---------LDNIQKLSE 57
E+ASG +S S++ + + + + + +SG+ + + I ++ + +E
Sbjct: 512 ERASGQVSESVQEIAGAADEQR---NMLDTVSGEMTDLSAAIEEVASADSVAEHSHQTAE 568
Query: 58 IMKELDKFQREFLPFFQRLETFANEFNTLVQNLEY-------ISKISDSIASVAKQTNLV 110
I ++ ++ + + +R T + VQN+E IS+I D I+ +A+QTN++
Sbjct: 569 IARDGEQTAEDAI---ERSLTVQEAIDATVQNVEALDDQMAEISEIVDLISDIAEQTNML 625
Query: 111 ALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDA-LRDALKV 169
ALNA+IEAARA ++G GFAVVADE++ A +T A +I+ ++V Q A + +A
Sbjct: 626 ALNANIEAARADKSGDGFAVVADEVKDFAEETQESAGDIERRITEVQSQTTATVAEARAA 685
Query: 170 MDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDI 208
+ + G + ++ +VD ++D S E + + +I
Sbjct: 686 EESMDAGIDA----VEEVVDAFTAVSDHSDETDTGVQEI 720
>pir||F81297 probable MCP-type signal transduction protein Cj1506c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968931|emb|CAB73927.1| (AL139078) putative MCP-type
signal transduction protein [Campylobacter jejuni]
Length = 700
Score = 78.0 bits (189), Expect = 9e-14
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 12 ALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLP 71
AL S + + E + L +EI + ++ D + E+ + K
Sbjct: 477 ALDFSTEVFNAKGEVEITTNILGKEIKKMLLASSNFAKDLANQSEELKNSMQKLADGSNA 536
Query: 72 FFQRLETFA---NEFNTLVQNL-----------EYISKISDSIASVAKQTNLVALNASIE 117
LE A E N+ +QN+ + I I + I +A+QTNL+ALNA+IE
Sbjct: 537 QASSLEQSAAAVEEINSSMQNVSGKTVEVASQADDIKNIVNVIKDIAEQTNLLALNAAIE 596
Query: 118 AARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQ-----LDALRDALKVMDR 172
AARAGE GRGFAVVADE+R++A +T EI E N ++ Q +++++ + +
Sbjct: 597 AARAGEHGRGFAVVADEVRQLAERTGKSLSEI-EANINILVQSVNEVAESVKEQTAGITQ 655
Query: 173 IREGTEILGRDIQIIVDISNVLNDISKEQEQ 203
I + L + V+++NV N+I+ E Q
Sbjct: 656 INDAIAQLETVTKENVEVANVTNNITNEVNQ 686
>pir||B82215 methyl-accepting chemotaxis protein VC1313 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655802|gb|AAF94471.1| (AE004211) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 543
Score = 78.0 bits (189), Expect = 9e-14
Identities = 66/229 (28%), Positives = 110/229 (47%), Gaps = 29/229 (12%)
Query: 25 ESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEFN 84
E S + A S + N ++ +IQ++++I+ E + E LE +++ N
Sbjct: 321 EDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSE-------LEQQSSQIN 373
Query: 85 TLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMN 144
+V D I S+A QTNL+ALNA+IEAARAGE+GRGFAVVADE+R +A +T +
Sbjct: 374 VVV----------DVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQD 423
Query: 145 LAKEIKEFNSKVMDQLDALRDALK-----VMDRIREGTEILGRDIQI------IVDISNV 193
EI K+ +DA + + + +G I I I D+
Sbjct: 424 STGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQ 483
Query: 194 LNDISKEQEQFINDIKR-LKGIALALEKFSELQDRYNKELASLLRLLAS 241
+ EQ+ +++ R ++ I LA ++ ++ + + L +L S
Sbjct: 484 IASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVS 532
>pir||E82508 methyl-accepting chemotaxis protein VCA0031 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9657412|gb|AAF95945.1| (AE004347) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 521
Score = 78.0 bits (189), Expect = 9e-14
Identities = 69/238 (28%), Positives = 119/238 (49%), Gaps = 28/238 (11%)
Query: 13 LSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPF 72
+S+S+ + S++S K V+E S + T D+ +L E + ++ +
Sbjct: 278 ISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQ----NQQLVEK 333
Query: 73 FQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVA 132
+ A E NT V E ++ I I S+A+QTNL+ALNA+IEAARAGE GRGFAVVA
Sbjct: 334 AEITTKTATELNTQV---EKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVA 390
Query: 133 DEIRRMAVQTM-------NLAKEIKEFNSKVMDQL-DALRDALKVMDRIREGTEILGRDI 184
DE+R +A +T L ++ ++ ++ + ++L A + I G+ ++ +
Sbjct: 391 DEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDK-- 448
Query: 185 QIIVDIS-------NVLNDISKEQ---EQFINDIKRLKGIALALEKFSELQDRYNKEL 232
I+D++ N ++D ++ EQ + ++ L A L S ++KEL
Sbjct: 449 -AIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKEL 505
>dbj|BAB05546.1| (AP001513) methyl-accepting chemotaxis protein [Bacillus
halodurans]
Length = 678
Score = 78.0 bits (189), Expect = 9e-14
Identities = 58/208 (27%), Positives = 104/208 (49%), Gaps = 21/208 (10%)
Query: 9 ASGALSHSLRLTVSSKESSKIVSEL------AEEISGKFMENNTLILDNIQKLSEIMKEL 62
A+GA+ + + + + K+ +++ A +I+ + ++++ + ++
Sbjct: 403 ANGAVDQAEEIEHAKSDIEKLSAQIDWMDQTASQINELAASTANVSASGLEQVETLREKT 462
Query: 63 DKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAG 122
++ +R Q++E N F V E I I + I S ++QTNL+ALNASIEAARAG
Sbjct: 463 EEHER----IIQKMEGIVNHF---VHQTEEILSIVELIQSFSEQTNLLALNASIEAARAG 515
Query: 123 EAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQ-LDALRDALKVMDRIREGTEILG 181
E G+GF+VVA+EIR++A Q+ I+ K+ + A + K + E + +
Sbjct: 516 EYGKGFSVVAEEIRKLAEQSTKATNNIQSAVQKIKESGAHATEEMTKTAAQSAEQVKRVD 575
Query: 182 RDIQIIVDISNVLNDISKEQEQFINDIK 209
+ I IS+ + EQ +N IK
Sbjct: 576 QSIASFTHISSNI-------EQVVNSIK 596
>sp|Q00986|MCPA_CAUCR CHEMORECEPTOR MCPA (METHYL-ACCEPTING CHEMOTAXIS PROTEIN)
>gi|94570|pir||S23064 mcpA protein - Caulobacter
crescentus >gi|40424|emb|CAA47122.1| (X66502) mcpA
[Caulobacter crescentus]
Length = 657
Score = 77.6 bits (188), Expect = 1e-13
Identities = 59/175 (33%), Positives = 90/175 (50%), Gaps = 17/175 (9%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
IS+I I +A QTNL+ALNA +EAARAGEAGRGFAVVA E+R +A ++ AKEIK
Sbjct: 442 ISQIIGVIDEIAFQTNLLALNAGVEAARAGEAGRGFAVVAQEVRALAQRSAEAAKEIKAL 501
Query: 153 NSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDI---SKEQEQFINDIK 209
S Q+ + + + + E L R + + +I ++ +I + EQ +N++
Sbjct: 502 ISSSTQQVS------QGVSLVGQTGEALQRIVTKVGEIDALVTEIAASAAEQATGLNEVN 555
Query: 210 R--------LKGIALALEKFSELQDRYNKELASLLRLLASEYSRSGGDSNGKKAL 256
+ A +E+ + E A L+RL+A SG S + A+
Sbjct: 556 TAVNQMDQVTQQNAAMVEQSTAATHSLKGETAELVRLMARFQVGSGSSSYARPAV 610
>sp|P33741|HTRI_HALHA SENSORY RHODOPSIN I TRANSDUCER (HTR-I) (METHYL-ACCEPTING PHOTOTAXIS
PROTEIN I) (MPP-I) >gi|421715|pir||A47190 transducer
protein htrI [validated] - Halobacterium salinarum
>gi|305352|gb|AAA72315.1| (L05603) sensory rhodopsin I
transducer [Halobacterium halobium]
>gi|10581131|gb|AAG19913.1| (AE005075) Htr1 transducer;
Htr1 [Halobacterium sp. NRC-1]
Length = 536
Score = 77.6 bits (188), Expect = 1e-13
Identities = 63/213 (29%), Positives = 108/213 (50%), Gaps = 9/213 (4%)
Query: 22 SSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQ-RLETFA 80
S+ + + VS AEEI+ +++ +++ S+ ++ K + + + ++
Sbjct: 252 SAADDVQQVSASAEEIAAT-IDDLASRSEDVATASDAARDSSKSALDEMSSIETEVDDAV 310
Query: 81 NEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAG--EAGRGFAVVADEIRRM 138
+ L + I+ I D I + +QTN++ALNASIEAARAG G GF+VVADE++ +
Sbjct: 311 GQVEQLRDQVAEITDIVDVITDIGEQTNMLALNASIEAARAGGNADGDGFSVVADEVKDL 370
Query: 139 AVQTMNLAKEIKEFNSKVMDQL-DALRDALKVMDRIREGTEILG---RDIQIIVD-ISNV 193
A +T + A EI KV Q D + R+ G+E + RDI+ I D I+ V
Sbjct: 371 AEETQDRANEIAAVVEKVTAQTEDVTASIQQTRTRVESGSETVESTLRDIRTIADSIAEV 430
Query: 194 LNDISKEQEQFINDIKRLKGIALALEKFSELQD 226
N I + Q + ++ A ++E+ + L D
Sbjct: 431 SNSIDEIQRTTSEQAETVQSTATSVERVAGLSD 463
>pir||C69832 methyl-accepting chemotaxis protein homolog yhfV - Bacillus
subtilis >gi|2226258|emb|CAA74545.1| (Y14084)
hypothetical protein [Bacillus subtilis]
>gi|2633374|emb|CAB12878.1| (Z99109) similar to
methyl-accepting chemotaxis protein [Bacillus subtilis]
Length = 432
Score = 77.6 bits (188), Expect = 1e-13
Identities = 58/200 (29%), Positives = 107/200 (53%), Gaps = 11/200 (5%)
Query: 6 LEKASGALSHSLRLTVSSKESSKIVSELAEEISG--KFMENNTLILDNIQKLS-EIMKEL 62
+++ SG++++ E+S+ V EL ++ G + + T+ +++ S KEL
Sbjct: 202 IQETSGSIANLF------SETSRSVQELVDKSEGISQASKAGTVTSSTVEEKSIGGKKEL 255
Query: 63 DKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAG 122
+ Q++ L E L + + I KI + +A+QTNL++LNASIE+ARAG
Sbjct: 256 EVQQKQMNKIDTSLVQIEKEMVKLDEIAQQIEKIFGIVTGIAEQTNLLSLNASIESARAG 315
Query: 123 EAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALK-VMDRIREGTEILG 181
E G+GFAVVA+E+R+++ T + E + Q++ + +K V + + E E +
Sbjct: 316 EHGKGFAVVANEVRKLSEDTKKTVSTVSELVNNTNTQINIVSKHIKDVNELVSESKEKMT 375
Query: 182 RDIQIIVDISNVLNDISKEQ 201
+ ++ +I + + ISKEQ
Sbjct: 376 QINRLFDEIVHSMK-ISKEQ 394
>gb|AAF61289.1|AF064528_2 (AF064528) phototransducer; methyl-accepting chemotaxis protein;
Ptr [Rhodospirillum centenum (Rhodocista centenaria)]
Length = 671
Score = 77.3 bits (187), Expect = 2e-13
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 12/242 (4%)
Query: 6 LEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKF 65
++ +G LS + R T S +E+ SG+ N + + ++LS + E+ +
Sbjct: 419 IQDNAGELSAAARQTSSQ-------AEVVAAASGQASNNVQTVAASAEELSASIAEIGRQ 471
Query: 66 QREFLPFFQRLETFANEFNTLVQNL----EYISKISDSIASVAKQTNLVALNASIEAARA 121
+ Q A N V+ L + I + I+ +A QTNL+ALNA+IEAARA
Sbjct: 472 VQRSSERAQAATGMAQGANEQVEALAAQADAIGSVVQLISEIAAQTNLLALNATIEAARA 531
Query: 122 GEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALK-VMDRIREGTEIL 180
GEAG+GFAVVA E++ +A QT ++I +++ A++ + I E EI
Sbjct: 532 GEAGKGFAVVAGEVKSLASQTARATEDIGRQIARMQQASHGTVSAIRGIAGMITEMNEIA 591
Query: 181 GRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLA 240
+ + +IS+ +Q + + + + ++ R + +L RLL+
Sbjct: 592 AGIAAAVQQQAAATGEISRSVQQAASGTEEIDRSIGDVRSAADRTGRASADLLDAARLLS 651
Query: 241 SE 242
S+
Sbjct: 652 SQ 653
>pir||E82189 methyl-accepting chemotaxis protein VC1535 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9656040|gb|AAF94689.1| (AE004231) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 530
Score = 77.3 bits (187), Expect = 2e-13
Identities = 55/212 (25%), Positives = 110/212 (50%), Gaps = 17/212 (8%)
Query: 36 EISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISK 95
EI+G ++ T ++ + ++ +K +++ Q+ L + L Q + I +
Sbjct: 302 EIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQRVTSIRE 361
Query: 96 ISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSK 155
+ D I+ +A TNL+ALNA+IEAARAGE GRGFAVVADE+R++A T I++ ++
Sbjct: 362 MVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNE 421
Query: 156 VMDQLDALRDAL-----KVMDRIREGTEILGRDIQIIVDISNV------LNDISKEQEQF 204
++ R A+ +++ ++ E+ +QI ++++ + ++EQ++
Sbjct: 422 LVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQKRA 481
Query: 205 INDIKRLKGIALALEKFSELQDRYNKELASLL 236
D+ + A+ + SE ++L ++L
Sbjct: 482 TADVNK------AVAQISEQGQETKRQLDAML 507
>pir||H83324 probable chemotaxis transducer PA2573 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9948634|gb|AAG05961.1|AE004685_7 (AE004685) probable
chemotaxis transducer [Pseudomonas aeruginosa]
Length = 535
Score = 77.3 bits (187), Expect = 2e-13
Identities = 58/195 (29%), Positives = 104/195 (52%), Gaps = 28/195 (14%)
Query: 25 ESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEFN 84
++++++S +EE++ +IL+ ++ +S I +++ +
Sbjct: 314 DNARVISAKSEELASS---GGQVILNVVEGMSRIADVVNQS--------------STSIT 356
Query: 85 TLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMN 144
L Q+ + I I I +A+QTNL+ALNA+IEAARAGEAGRGFAVVADE+R +A +T
Sbjct: 357 ALGQSSDEIHSIIQVIKGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAARTTQ 416
Query: 145 LAKEIKEFNSKVMDQLDALRDALKV-MDRIREGTEI---LGRDIQIIVD----ISNVLND 196
+EI ++ ++++ + R+ EG G I I+D ++V+++
Sbjct: 417 STQEITAMIERIRASTGQAINSMEAGVSRVNEGVSFARQAGVSINEILDGTRHAASVVDE 476
Query: 197 IS---KEQEQFINDI 208
IS +EQ + ++I
Sbjct: 477 ISQTIREQSRASDEI 491
>gb|AAG19986.1| (AE005080) Htr5 transducer; Htr5 [Halobacterium sp. NRC-1]
Length = 810
Score = 77.3 bits (187), Expect = 2e-13
Identities = 59/220 (26%), Positives = 116/220 (51%), Gaps = 28/220 (12%)
Query: 7 EKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLI----------LDNIQKLS 56
E+ASG +S S++ + + + + + +SG+ + + I ++ + +
Sbjct: 517 ERASGQVSESVQEIAGAADEQR---NMLDTVSGEMTDLSAAIEEVAASADSVAEHSHQTA 573
Query: 57 EIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEY-------ISKISDSIASVAKQTNL 109
EI ++ ++ + + +R T + VQN+E IS+I D I+ +A+QTN+
Sbjct: 574 EIARDGEQTAEDAI---ERSLTVQEAIDATVQNVEALDDQMAEISEIVDLISDIAEQTNM 630
Query: 110 VALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDA-LRDALK 168
+ALNA+IEAARA ++G GFAVVADE++ +A +T A +I+ ++V Q A + +A
Sbjct: 631 LALNANIEAARADKSGDGFAVVADEVKDLAEETQESAGDIERRITEVQSQTTATVAEARA 690
Query: 169 VMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDI 208
+ + G + ++ +VD ++D + E + + +I
Sbjct: 691 AEESMDAGIDA----VEEVVDAFTAVSDHADETDTGVQEI 726
>gb|AAB47275.1| (U86607) 48 kDa antigen [Helicobacter pylori]
Length = 433
Score = 77.3 bits (187), Expect = 2e-13
Identities = 45/122 (36%), Positives = 75/122 (60%), Gaps = 4/122 (3%)
Query: 32 ELAEEISGKFMENNTLILDNIQK----LSEIMKELDKFQREFLPFFQRLETFANEFNTLV 87
E A+E F + L+L+ + +E + ++K ++ +++++ + ++L
Sbjct: 125 ENAQESMQYFHQETGLLLNAAKNGEAHSTEGLGTVNKTGQDIESLYEKMQNATSLADSLN 184
Query: 88 QNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAK 147
Q I+++ I +A+QTNL+ALNA+IEAARAGE GRGFAVVADE+R++A +T K
Sbjct: 185 QRSNEITQVISLIDDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAEKTQKATK 244
Query: 148 EI 149
EI
Sbjct: 245 EI 246
>pir||B69814 methyl-accepting chemotaxis protein homolog yfmS - Bacillus
subtilis >gi|2116757|dbj|BAA20108.1| (D86418) YfmS
[Bacillus subtilis] >gi|2633049|emb|CAB12555.1| (Z99107)
similar to methyl-accepting chemotaxis protein [Bacillus
subtilis] >gi|2633060|emb|CAB12565.1| (Z99108) similar
to methyl-accepting chemotaxis protein [Bacillus
subtilis]
Length = 286
Score = 77.3 bits (187), Expect = 2e-13
Identities = 52/203 (25%), Positives = 107/203 (52%), Gaps = 16/203 (7%)
Query: 6 LEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKF 65
L +G + + L S +ESSK+ ++AE +S ++ +S+I + ++ F
Sbjct: 98 LHDENGRVIGGVGLGTSLEESSKL-HDVAESLSA-------VVEQTAAAISDISESINGF 149
Query: 66 QREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAG 125
+ + +++ + ++ I+ IS ++ ++ Q+NL+ LNA+IEAARAGE+G
Sbjct: 150 STQ-------MSGISSQAKKVSESAGEIADISVTVKGISDQSNLLGLNAAIEAARAGESG 202
Query: 126 RGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQ 185
+GF+VVADEIR++A + +I + K+ L L ++++ +++ +G I
Sbjct: 203 KGFSVVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIESINQHTDGQAAAVEQIS 262
Query: 186 IIV-DISNVLNDISKEQEQFIND 207
+ +IS ++K E+ + +
Sbjct: 263 ATMQEISGSAQHLAKMAEKALEE 285
>gb|AAD34887.1|AF141674_1 (AF141674) putative chemotaxis chemoreceptor McpG [Rhizobium
leguminosarum]
Length = 653
Score = 77.3 bits (187), Expect = 2e-13
Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 28/254 (11%)
Query: 4 RTLEKASGALSHSLRLTVSSKESSKIVSELA---EEISGKFMENNTLILDNIQKLSE--- 57
+ + AS + + + +S + +K + A EE + E T + D+ K E
Sbjct: 353 KVAQNASAIAAGAQEIRSASDDLAKRTEQQAASVEETAAALEEITTTVADSSNKAQEAGQ 412
Query: 58 -IMKELDKFQR------EFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLV 110
+ K D +R + + ++E+ A E +++ ++ +A QTNL+
Sbjct: 413 LVRKTKDSAERSGSVVRDAVDAMGKIESSATEIGSIIGVID----------EIAFQTNLL 462
Query: 111 ALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF----NSKVMDQLDALRDA 166
ALNA +EAARAGEAG+GFAVVA E+R +A ++ AKEIKE N V + + +
Sbjct: 463 ALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAKAAKEIKELINASNGHVKSGVALVGET 522
Query: 167 LKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKR-LKGIALALEKFSELQ 225
K + I E + + ++ IV S KE +N + + + A +E+ +
Sbjct: 523 GKALKEIAEQVQQVDGNVGAIVGASQEQATGLKEINTAVNRMDQGTQQNAAMVEEATAAS 582
Query: 226 DRYNKELASLLRLL 239
KE +L +LL
Sbjct: 583 HNLAKEADALFQLL 596
>pir||JQ1475 probable methyl-accepting chemotaxis protein - Escherichia coli
transposon Tn1721 >gi|48195|emb|CAA43639.1| (X61367)
product exhibits features of a methyl-accepting
chemotaxis protein [Escherichia coli]
Length = 525
Score = 76.9 bits (186), Expect = 2e-13
Identities = 50/144 (34%), Positives = 83/144 (56%), Gaps = 11/144 (7%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
ISK+ D I +A+QTNL+ALNA+IEAARAGE GRGFAVVADE+R +A +T +I+
Sbjct: 352 ISKVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAARTQQSTTDIQSM 411
Query: 153 NSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLK 212
S + ++ + A+ VM+ + + + + + L+ I Q +N+I +
Sbjct: 412 ISALQER---AQSAVTVME---QSSRQAHTSVAHAEEAATALDGIG----QRVNEITDMN 461
Query: 213 G-IALALEKFSELQDRYNKELASL 235
IA A+E+ + + N+ + ++
Sbjct: 462 AQIATAVEQQGAVSEDINRSIINI 485
>gb|AAC27625.1| (AF074954) methyl-accepting chemotaxis-like protein [Pseudomonas
aeruginosa]
Length = 246
Score = 76.9 bits (186), Expect = 2e-13
Identities = 50/144 (34%), Positives = 83/144 (56%), Gaps = 11/144 (7%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
ISK+ D I +A+QTNL+ALNA+IEAARAGE GRGFAVVADE+R +A +T +I+
Sbjct: 73 ISKVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAARTQQSTTDIQSM 132
Query: 153 NSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLK 212
S + ++ + A+ VM+ + + + + + L+ I Q +N+I +
Sbjct: 133 ISALQER---AQSAVTVME---QSSRQAHTSVAHAEEAATALDGIG----QRVNEITDMN 182
Query: 213 G-IALALEKFSELQDRYNKELASL 235
IA A+E+ + + N+ + ++
Sbjct: 183 AQIATAVEQQGAVSEDINRSIINI 206
>pir||H82379 methyl-accepting chemotaxis protein VCA1092 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658538|gb|AAF96984.1| (AE004434) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 678
Score = 76.9 bits (186), Expect = 2e-13
Identities = 48/121 (39%), Positives = 73/121 (59%), Gaps = 9/121 (7%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
I+ I I +A QTNL+ALNA++EAARAGE GRGFAVVA E+R +A ++ AKEIK
Sbjct: 471 IADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAGAAKEIK-- 528
Query: 153 NSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDI---SKEQEQFINDIK 209
+ D +D + + ++ + E L ++ +V +S+++ I S EQ I++I
Sbjct: 529 -GLINDSVDKVNEGSRL---VNESGSTLKEIVEAVVRVSDLIAQIAASSVEQSTGIDEIN 584
Query: 210 R 210
R
Sbjct: 585 R 585
>gb|AAG37852.1|AF298190_2 (AF298190) methyl-accepting-chemotaxis-protein [Sinorhizobium
meliloti]
Length = 593
Score = 76.9 bits (186), Expect = 2e-13
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 16/245 (6%)
Query: 7 EKASGALSHSLRLTVSSKESSKIVSELA---EEISGKFMENNTLILDNIQKLSE----IM 59
E AS + + ++ + SK + A EE + E T + D+ ++ E +
Sbjct: 300 ENASAIAGGAREIRSAADDLSKRTEQQAASVEETAAALDEITTTVADSSRRAEEAGNLVA 359
Query: 60 KELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAA 119
K D +R L +++ + Q+ IS I I +A QTNL+ALNA +EAA
Sbjct: 360 KTKDGAERSGLV----VKSAIGAMGQIEQSSREISNIIGVIDDIAFQTNLLALNAGVEAA 415
Query: 120 RAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF----NSKVMDQLDALRDALKVMDRIRE 175
RAGEAG+GFAVVA E+R +A ++ + AK+IK V + + + ++ I
Sbjct: 416 RAGEAGKGFAVVAQEVRELAQRSASAAKDIKTLITASGEHVRNGVSLVGQTGTALETILA 475
Query: 176 GTEILGRDIQIIVDISNVLNDISKEQEQFINDI-KRLKGIALALEKFSELQDRYNKELAS 234
+ + ++ IV+ + + KE Q +N + + + A +E+ + R ++E +
Sbjct: 476 QVQEINHNVSAIVEAAREQSTGLKEINQAVNAMDQTTQQNAAMVEESTAASHRMSQEADA 535
Query: 235 LLRLL 239
L LL
Sbjct: 536 LHALL 540
>sp|P29486|TCPI_VIBCH TOXIN CORREGULATED PILUS BIOSYNTHESIS PROTEIN I (TCP PILUS
BIOSYNTHESIS PROTEIN TCPI) >gi|409772|gb|AAA21729.1|
(L25659) toxin co-regulated pilus [Vibrio cholerae]
Length = 620
Score = 76.5 bits (185), Expect = 3e-13
Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 12/156 (7%)
Query: 84 NTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTM 143
N L + + IS ++D I +++ QTNL+ALNA+IEAARAGE GRGFAVVADE+R +AV+T
Sbjct: 437 NQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQ 496
Query: 144 NLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDI--------QIIVDISNVLN 195
+I+ K+ +Q + + T++ R + +++ISN+ +
Sbjct: 497 QSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINS 556
Query: 196 DIS---KEQEQFINDI-KRLKGIALALEKFSELQDR 227
+S EQ+ D+ K+++ I +++ +R
Sbjct: 557 IVSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMER 592
>sp|P05704|MCP3_ECOLI METHYL-ACCEPTING CHEMOTAXIS PROTEIN III (MCP-III) (RIBOSE AND
GALACTOSE CHEMORECEPTOR PROTEIN) >gi|7428893|pir||QREC3M
methyl-accepting chemotaxis protein III - Escherichia
coli >gi|1742320|dbj|BAA15044.1| (D90781)
Methyl-accepting chemotaxis protein III (MCP-III)
(Ribose and galactose chemoreceptor protein).
[Escherichia coli] >gi|1742331|dbj|BAA15053.1| (D90782)
Methyl-accepting chemotaxis protein III (MCP-III)
(Ribose and galactose chemoreceptor protein).
[Escherichia coli] >gi|1787690|gb|AAC74503.1| (AE000239)
methyl-accepting chemotaxis protein III, ribose sensor
receptor [Escherichia coli K12]
>gi|4481751|gb|AAA81329.2| (K02073) Trg sensory
transducer protein [Escherichia coli]
Length = 546
Score = 76.5 bits (185), Expect = 3e-13
Identities = 47/144 (32%), Positives = 84/144 (57%), Gaps = 13/144 (9%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
IS+I+ I S+A QTN++ALNA++EAARAGE GRGFAVVA E+R +A ++ AKEI+
Sbjct: 369 ISEITAVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGL 428
Query: 153 NSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLK 212
S+ + +D D + + + + + +++++ +I+ ++ + +
Sbjct: 429 ISESVRLIDL------GSDEVATAGKTMSTIVDAVASVTHIMQEIAAASDE------QSR 476
Query: 213 GIALALEKFSELQDRYNKELASLL 236
GI + SE+ D+ ++ ASL+
Sbjct: 477 GITQVSQAISEM-DKVTQQNASLV 499
>pir||F82342 methyl-accepting chemotaxis protein VC0282 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9654693|gb|AAF93457.1| (AE004116) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 556
Score = 76.5 bits (185), Expect = 3e-13
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 82 EFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQ 141
E L + +S + + I VA+QTNL+ALNA+IEAARAGE GRGFAVVADE+R +A +
Sbjct: 375 ETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLATR 434
Query: 142 TMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQ 201
T EI++ +++ + ++ ++ + T+ Q +LN+I +
Sbjct: 435 TQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQ------QMLNEIEAQI 488
Query: 202 EQFINDIKRLKGIALALEKFSELQDRYNKELASL 235
+ ++ + + G A + SE D + L +
Sbjct: 489 KTILSFNQHIAG---ASAQQSEATDEITRNLTQI 519
>pir||D82274 toxin co-regulated pilus biosynthesis protein I VC0825 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655276|gb|AAF93988.1| (AE004168) toxin co-regulated
pilus biosynthesis protein I [Vibrio cholerae]
Length = 620
Score = 76.5 bits (185), Expect = 3e-13
Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 12/156 (7%)
Query: 84 NTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTM 143
N L + + IS ++D I +++ QTNL+ALNA+IEAARAGE GRGFAVVADE+R +AV+T
Sbjct: 437 NQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQ 496
Query: 144 NLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDI--------QIIVDISNVLN 195
+I+ K+ +Q + + T++ R + +++ISN+ +
Sbjct: 497 QSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINS 556
Query: 196 DIS---KEQEQFINDI-KRLKGIALALEKFSELQDR 227
+S EQ+ D+ K+++ I +++ +R
Sbjct: 557 IVSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMER 592
>pir||A82134 methyl-accepting chemotaxis protein VC1967 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9656507|gb|AAF95115.1| (AE004272) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 684
Score = 76.5 bits (185), Expect = 3e-13
Identities = 65/213 (30%), Positives = 107/213 (49%), Gaps = 19/213 (8%)
Query: 20 TVSSKESSKIVSELAEEISGKFM---ENNTLILDNIQKLSEIMKELDKFQREFLPFFQRL 76
T + SS+++S A EIS + +N L N+++ ++ + EL Q
Sbjct: 449 TAMTAISSQVISG-AREISQSVLNIDKNAQSTLSNVRQAAQSVNEL------VAEVTQGT 501
Query: 77 ETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIR 136
ET N+L ++ I + I +A+QTNL+ALNA+IEAARAGE GRGFAVVADE+R
Sbjct: 502 ETI----NSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 557
Query: 137 RMAVQTMNLAKEIKEFNSKVMDQLD-ALRDALKVMDRIREGTEILGRD----IQIIVDIS 191
+A +T I++ +++ D ++R M + + TEI + Q+ ++IS
Sbjct: 558 SLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEIS 617
Query: 192 NVLNDISKEQEQFINDIKRLKGIALALEKFSEL 224
+ + E + + + IA +L L
Sbjct: 618 RLTQMNQQTSEAITHQEQSVTSIASSLSHLQAL 650
>pir||D82218 methyl-accepting chemotaxis protein VC1289 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655776|gb|AAF94448.1| (AE004208) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 631
Score = 76.1 bits (184), Expect = 4e-13
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 17/174 (9%)
Query: 61 ELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAAR 120
++ + QR + ++ L + IS I +I ++A+QTNL+ALNA+IEAAR
Sbjct: 429 QVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNLLALNAAIEAAR 488
Query: 121 AGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALR-DALKVMDRIREGTEI 179
AGE GRGFAVVADE+R ++ +T KEI++ +++ L A A+ +MD
Sbjct: 489 AGEQGRGFAVVADEVRVLSQRTHASTKEIQQ----MIETLQATTGKAVGIMD-------- 536
Query: 180 LGRDIQIIVDIS-NVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKEL 232
D + + D S + N+ S EQ ++R+ +A + +E Q E+
Sbjct: 537 ---DSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEI 587
>pir||C82205 methyl-accepting chemotaxis protein VC1394 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655890|gb|AAF94552.1| (AE004218) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 411
Score = 76.1 bits (184), Expect = 4e-13
Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 32/258 (12%)
Query: 2 NIRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKE 61
+I +L+ A+ +H L+ +S +VS L E +TL++ N+ + +
Sbjct: 124 HICSLDHAAANFTHYLK--DMEFDSQNMVSSLDE---------HTLVISNLADSTRSL-- 170
Query: 62 LDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARA 121
++T + N ++ + +++I++ I+ +A +TNL+ALNA+IEAAR+
Sbjct: 171 -----------MSNIQTERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAARS 219
Query: 122 GEAGRGFAVVADEIRRMAVQTMNLAKEI-KEFNSKVMDQLDALRDALKVMDRIREGTEIL 180
GE GRGFAVVADE+R +A + A +I +E S + A K +++
Sbjct: 220 GEMGRGFAVVADEVRHLAQRAGEAASQISEEIESLRAEVTQRFEVANKESSEQNIKADMM 279
Query: 181 GRDIQIIVDISNVLNDISKEQEQFI----NDIKRLKGIALALEKFSELQDRYNKELASLL 236
+Q + + + ++S+ Q I ND+++ ++A +F QD ++L S+
Sbjct: 280 IESVQSLRQSFSSVRELSERQITQIMLYNNDLEKNISGSMACTQF---QDIVRQKLDSIE 336
Query: 237 RLLASEYSRSGGDSNGKK 254
L+ ++ G NG +
Sbjct: 337 ALMREKHLLVGDVFNGMR 354
>pir||G83404 probable chemotaxis transducer PA1930 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9947925|gb|AAG05318.1|AE004619_5 (AE004619) probable
chemotaxis transducer [Pseudomonas aeruginosa]
Length = 431
Score = 76.1 bits (184), Expect = 4e-13
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 14/140 (10%)
Query: 76 LETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEI 135
+ T + L + I I +I SVA+QTNL+ALNA+IEAARAG+ GRGFAVVADE+
Sbjct: 300 VNTAVGLISQLTHQTKDIENIVTTIQSVAEQTNLLALNAAIEAARAGDMGRGFAVVADEV 359
Query: 136 RRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQ----IIVDIS 191
R++A +T EIK + + + +K+ +I + + Q I ++
Sbjct: 360 RQLAARTSGATVEIK----------NVVTENVKLTQQINHNMQTIESSAQENNNQITTVA 409
Query: 192 NVLNDISKEQEQFINDIKRL 211
++ +ISK E + L
Sbjct: 410 GIMQEISKGAEHVARVVSSL 429
>sp|Q48317|HTR4_HALSA HALOBACTERIAL TRANSDUCER PROTEIN IV >gi|11277608|pir||T46810
halobacterial transducer protein IV [imported] -
Halobacterium salinarum >gi|1435131|emb|CAA64841.1|
(X95589) halobacterial transducer protein IV
[Halobacterium salinarum]
Length = 810
Score = 75.7 bits (183), Expect = 5e-13
Identities = 58/220 (26%), Positives = 116/220 (52%), Gaps = 28/220 (12%)
Query: 7 EKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLI----------LDNIQKLS 56
E+ASG +S S++ + + + + + +SG+ + + I ++ + +
Sbjct: 517 ERASGQVSESVQEIAGAADEQR---NMLDTVSGEMTDLSAAIEEVAASADSVAEHSHQTA 573
Query: 57 EIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEY-------ISKISDSIASVAKQTNL 109
EI ++ ++ + + +R + + VQN+E IS+I D I+ +A+QTN+
Sbjct: 574 EIARDGEQTAEDAI---ERSLSVQEAIDATVQNVEALDDQMAEISEIVDLISDIAEQTNM 630
Query: 110 VALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDA-LRDALK 168
+ALNA+IEAARA ++G GFAVVADE++ +A +T A +I+ ++V Q A + +A
Sbjct: 631 LALNANIEAARADKSGDGFAVVADEVKDLAEETQESAGDIERRITEVQSQTTATVAEARA 690
Query: 169 VMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDI 208
+ + G + ++ +VD ++D + E + + +I
Sbjct: 691 AEESMDAGIDA----VEEVVDAFTAVSDHADETDTGVQEI 726
>gb|AAC46420.1| (AF036168) putative methyl accepting chemotaxis protein [Rhizobium
leguminosarum]
Length = 625
Score = 75.7 bits (183), Expect = 5e-13
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 18/253 (7%)
Query: 5 TLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDK 64
T E AS A S R T S + + EEI+ N T+ + + KE D
Sbjct: 356 TGEIASAAQDLSKR-TEQQAASLEETAAALEEITS----NVTMATKRTDEARNVAKEADI 410
Query: 65 FQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA 124
+ + E + + + IS I +I +A QTNL+ALNA +EAARAGEA
Sbjct: 411 SAQRSAAVVSQAE---GAMRRIEDSSQQISNIIGAIDEIAFQTNLLALNAGVEAARAGEA 467
Query: 125 GRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDI 184
G+GFAVVA E+R +A + AKEIK F K ++ + +K++ + +G +
Sbjct: 468 GKGFAVVAQEVRELAQRAAQAAKEIKGFIQKSSADVE---NGVKLVLETGTSLKSIGEYV 524
Query: 185 QIIVDISNVLNDISKEQEQFINDIK-RLKGIALALEKFSELQDRYNKELASL------LR 237
I + + + ++EQ + +I + + A ++ + + ++ +ASL LR
Sbjct: 525 VHINQLMDAIATSAREQSTGLAEINTAVNQMDQATQQNAAMVEQSTAAVASLSSEAGRLR 584
Query: 238 LLASEYSRSGGDS 250
L +++ G S
Sbjct: 585 DLVNQFQLDGDKS 597
>emb|CAA05367.1| (AJ002392) chemotactic receptor I [Leptospirillum ferrooxidans]
Length = 577
Score = 75.7 bits (183), Expect = 5e-13
Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 17/135 (12%)
Query: 86 LVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNL 145
+++ + +SK+ D VA QTNL+ALNA+IEAARAGE GRGFAVV DE+R ++ Q L
Sbjct: 439 VIEIVTVVSKVGD----VAAQTNLLALNAAIEAARAGEHGRGFAVVGDEVRNLSEQVRIL 494
Query: 146 AKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFI 205
+ I+E MDQ+ + T ++ D++ + +I +E Q +
Sbjct: 495 VQSIQE----KMDQVSTV---------TTNATNTFDSFASVVEDVTTHIREIGQEMNQLL 541
Query: 206 NDIKRLKGIALALEK 220
+ +K++ + E+
Sbjct: 542 DGVKKMGSTVSSTEQ 556
>gi|10954934 Putative mcpA [Agrobacterium tumefaciens]
>gi|6498287|dbj|BAA87739.1| (AB016260) Putative mcpA
[Agrobacterium tumefaciens]
Length = 574
Score = 75.7 bits (183), Expect = 5e-13
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 6 LEKASGALSHSLR-LTVSSKESSKIVSELA----------EEISGKFMENNTLILDNIQK 54
L++A ++ + R ++ S E ELA EE + E T + D+ ++
Sbjct: 291 LKRAMATVADNARAISAGSSEIRTAADELAKRTEQQAASVEETAAALEEITTTVKDSSRR 350
Query: 55 LSEIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNA 114
E + + + + + + + + + IS I I +A QTNL+ALNA
Sbjct: 351 AEEAGQLVARTREHAEHSGEVVRDAIGAMDQIETSSREISNIIGVIDEIAFQTNLLALNA 410
Query: 115 SIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF----NSKVMDQLDALRDALKVM 170
+EAARAGEAG+GFAVVA E+R +A ++ AKEIK S+V + + A +
Sbjct: 411 GVEAARAGEAGKGFAVVAQEVRELAQRSAKAAKEIKTLITSSGSQVQSGVSLVTKAGSAL 470
Query: 171 DRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKR-LKGIALALEKFSELQDRYN 229
I + ++ IV+ + ++ E + +N + + + A +E+ +
Sbjct: 471 QEIATQVHDINTNVVAIVEAAREQSNALGEINKAVNSVDQGTQQNAAMVEEQTAASHSLA 530
Query: 230 KELASLLRLL 239
+E A+L LL
Sbjct: 531 REAAALFELL 540
>pir||C81389 probable MCP-type signal transduction protein Cj0448c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6967919|emb|CAB75086.1| (AL139075) putative MCP-type
signal transduction protein [Campylobacter jejuni]
Length = 365
Score = 75.7 bits (183), Expect = 5e-13
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 27/155 (17%)
Query: 27 SKIVSELAEEISGKFMENNTLI----LDNIQKLSEIMKELDKFQREFLPFFQRLETFANE 82
SK+ ++L + ++N T+I L+N+ K I + + L L AN
Sbjct: 49 SKLKTDLLNVLLTGVLKNITIIQGDMLENVNKAEVI----SSYSKTSLAEMDELNHIANS 104
Query: 83 FN------------------TLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA 124
N TL ++++ I+ + + I V+ QTNL+ALNA+IEAARAGE
Sbjct: 105 INASLGNITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLALNAAIEAARAGEH 164
Query: 125 GRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQ 159
GRGFAVVADE+R++A +T E+ E N ++ Q
Sbjct: 165 GRGFAVVADEVRKLAEKTQKATTEV-EMNINLLKQ 198
>pir||H82143 methyl-accepting chemotaxis protein VC1898 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9656431|gb|AAF95046.1| (AE004265) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 672
Score = 75.7 bits (183), Expect = 5e-13
Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 37/254 (14%)
Query: 12 ALSHSLRLTVSSKESSKIVSELAE------EISGKFMENNTLILDNIQKLSEIMKELDKF 65
+LS +L +++S + + + E E++ +N+ ++ ++ SE +++
Sbjct: 415 SLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANS-AQNSLAMVQQVETASESGRQIMST 473
Query: 66 QREFLPFFQRLETFANEFNTLVQNLEYISK----ISDSIASVAKQTNLVALNASIEAARA 121
+ ++LET E V +L +S I D I ++A+QTNL+ALNA+IEAARA
Sbjct: 474 N---ISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARA 530
Query: 122 GEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEI-- 179
GE GRGFAVVADE+R +A +T EI+ S + A KV++ + E+
Sbjct: 531 GEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSSSL---ASKVIESCMQDMELSV 587
Query: 180 --------LGRDIQ-IIVDISNVLNDISK---EQEQFINDIKRLKGIALALEKFSELQDR 227
+IQ +I++IS++ IS+ EQ + I R ++E + + D
Sbjct: 588 EQASHANSAMEEIQALIIEISHMSTHISQAAGEQNETTTSIAR------SIEDINHISDE 641
Query: 228 YNKELASLLRLLAS 241
+ ++ + + A+
Sbjct: 642 SYQAMSQIAQTSAN 655
>pir||S75285 methyl-accepting chemotaxis protein homolog sll1294 - Synechocystis
sp. (strain PCC 6803) >gi|1652276|dbj|BAA17199.1|
(D90904) methyl-accepting chemotaxis protein (MCP)
[Synechocystis sp.]
Length = 953
Score = 75.3 bits (182), Expect = 6e-13
Identities = 55/174 (31%), Positives = 93/174 (52%), Gaps = 15/174 (8%)
Query: 75 RLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADE 134
R+ + + L ++ ISKI I+ ++++TNL+A NASIEAARAGE G+GF +VADE
Sbjct: 764 RVAEISKKSKRLAESSLEISKIVGIISGISEKTNLLAFNASIEAARAGENGQGFRIVADE 823
Query: 135 IRRMAVQTMNLAKEIKEF------NSKVMDQL--DALRDALKVMDRIREGTEILGRDIQI 186
+RR+A A+EI++ + M QL ++ + + +++ E L QI
Sbjct: 824 VRRLAEMVTLSAQEIEQVILSIQEETSQMSQLMEESTNEVVTGTQLVQKTKETLQNLAQI 883
Query: 187 IVDISNVLNDISKEQE------QFIND-IKRLKGIALALEKFSELQDRYNKELA 233
+I VL+ IS+ E Q + + ++ + +A A S+L + + LA
Sbjct: 884 SEEIDTVLDSISRNTESQRLASQMVTETVQNVASVAKATSDKSQLVSQSLQSLA 937
>pir||D75590 methyl-accepting chemotaxis protein - Deinococcus radiodurans
(strain R1) >gi|6460728|gb|AAF12433.1|AE001863_58
(AE001863) methyl-accepting chemotaxis protein
[Deinococcus radiodurans]
Length = 743
Score = 75.3 bits (182), Expect = 6e-13
Identities = 63/240 (26%), Positives = 108/240 (44%), Gaps = 18/240 (7%)
Query: 25 ESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRL-------E 77
E S+ ++E A EIS + + D+ + ++ + Q+ Q + +
Sbjct: 497 EQSRRLAERAAEISLRIQDLARSAQDSAAAAQQALQTSQQGQQAVQGTLQGMAAIREGTQ 556
Query: 78 TFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRR 137
A L + E I I D+I ++ QTNL++L+ASIEAA AGEAG FAVVADE+R+
Sbjct: 557 DVAQTMQALSERSEQIQGIVDTITQISSQTNLLSLHASIEAAGAGEAGSRFAVVADEVRQ 616
Query: 138 MAVQT-----------MNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQI 186
+A QT L +I + V + +V + + LG Q
Sbjct: 617 LAEQTNEATGRVAALITTLQSDIAQVRQGVQSSAAQVEKGYRVAEEAGSRLQELGDIAQR 676
Query: 187 IVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLASEYSRS 246
++ ++D+S Q + I + + AL + ++ + + A LR LA++ +S
Sbjct: 677 SAQLAGQMSDVSGAQARDIEQLGQGVQDIAALAEGAQQSVQRGRGAAEQLRALATQLDQS 736
>gb|AAG18922.1| (AE004994) Htr14 transducer; Htr14 [Halobacterium sp. NRC-1]
Length = 627
Score = 75.3 bits (182), Expect = 6e-13
Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 10/159 (6%)
Query: 74 QRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVAD 133
++ + A +L +E I I+ I +A++TN++ALNASIEAAR G G GFAVVAD
Sbjct: 349 EQSQAVAETVESLAAEVERIDGITALIEDIAEETNMLALNASIEAARTGSDGDGFAVVAD 408
Query: 134 EIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMD-----RIREGTEILGRDIQIIV 188
E++ +A +T A +I E V ++ + A+ +D +I + +L RD + IV
Sbjct: 409 EVKDLAEETREQAADISEIVDAVTEKAEDASIAIGEVDAEVERKITKAEGVL-RDFEAIV 467
Query: 189 D----ISNVLNDISKEQEQFINDIKRLKGIALALEKFSE 223
D +++ + +IS +Q + + G+ + SE
Sbjct: 468 DEVANVNHAVQEISDATDQGAQSVTDVVGMVEEVASVSE 506
>pir||QREBDT aspartate chemoreceptor protein - Salmonella typhimurium
Length = 552
Score = 74.9 bits (181), Expect = 8e-13
Identities = 63/233 (27%), Positives = 115/233 (49%), Gaps = 21/233 (9%)
Query: 5 TLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDK 64
T E A+G S R + + + + E+++ +N DN ++ S++ + +
Sbjct: 279 TSEIAAGNTDLSSRTEQQASALEETAASM-EQLTATVKQN----ADNARQASQLAQSASE 333
Query: 65 FQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA 124
R + ++ N + + + + I+ I I +A QTN++ALNA++EAARAGE
Sbjct: 334 TARHG---GKVVDGVVNTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQ 390
Query: 125 GRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDI 184
GRGFAVVA E+R +A ++ AKEIK + + D + + +++ E + +
Sbjct: 391 GRGFAVVAGEVRNLASRSAQAAKEIK---ALIEDSVSRVDTGSVLVESAGETMTDIVNAV 447
Query: 185 QIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLR 237
+ DI + S EQ + I+ +ALA+ + DR ++ ASL++
Sbjct: 448 TRVADIMGEIASASDEQSRGIDQ------VALAVSE----MDRVTQQNASLVQ 490
>pir||A29053 aspartate chemoreceptor protein - Salmonella typhimurium
Length = 552
Score = 74.9 bits (181), Expect = 8e-13
Identities = 63/233 (27%), Positives = 115/233 (49%), Gaps = 21/233 (9%)
Query: 5 TLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDK 64
T E A+G S R + + + + E+++ +N DN ++ S++ + +
Sbjct: 279 TSEIAAGNTDLSSRTEQQASALEETAASM-EQLTATVKQN----ADNARQASQLAQSASE 333
Query: 65 FQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA 124
R + ++ N + + + + I+ I I +A QTN++ALNA++EAARAGE
Sbjct: 334 TARHG---GKVVDGVVNTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQ 390
Query: 125 GRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDI 184
GRGFAVVA E+R +A ++ AKEIK + + D + + +++ E + +
Sbjct: 391 GRGFAVVAGEVRNLASRSAQAAKEIK---ALIEDSVSRVDTGSVLVESAGETMTDIVNAV 447
Query: 185 QIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLR 237
+ DI + S EQ + I+ +ALA+ + DR ++ ASL++
Sbjct: 448 TRVADIMGEIASASDEQSRGIDQ------VALAVSE----MDRVTQQNASLVQ 490
>sp|P02941|MCP2_SALTY METHYL-ACCEPTING CHEMOTAXIS PROTEIN II (MCP-II) (ASPARTATE
CHEMORECEPTOR PROTEIN)
Length = 553
Score = 74.9 bits (181), Expect = 8e-13
Identities = 63/233 (27%), Positives = 115/233 (49%), Gaps = 21/233 (9%)
Query: 5 TLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDK 64
T E A+G S R + + + + E+++ +N DN ++ S++ + +
Sbjct: 279 TSEIAAGNTDLSSRTEQQASALEETAASM-EQLTATVKQN----ADNARQASQLAQSASE 333
Query: 65 FQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA 124
R + ++ N + + + + I+ I I +A QTN++ALNA++EAARAGE
Sbjct: 334 TARHG---GKVVDGVVNTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQ 390
Query: 125 GRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDI 184
GRGFAVVA E+R +A ++ AKEIK + + D + + +++ E + +
Sbjct: 391 GRGFAVVAGEVRNLASRSAQAAKEIK---ALIEDSVSRVDTGSVLVESAGETMTDIVNAV 447
Query: 185 QIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLR 237
+ DI + S EQ + I+ +ALA+ + DR ++ ASL++
Sbjct: 448 TRVADIMGEIASASDEQSRGIDQ------VALAVSE----MDRVTQQNASLVQ 490
>sp|P71410|HTR2_HALSA SENSORY RHODOPSIN II TRANSDUCER (HTR-II) (METHYL-ACCEPTING
PHOTOTAXIS PROTEIN II) (MPP-II) >gi|11385312|pir||T44946
transducer protein htrII [validated] - Halobacterium
salinarum >gi|1527137|gb|AAC44369.1| (U62676) phototaxis
transducer II [Halobacterium salinarum]
Length = 765
Score = 74.9 bits (181), Expect = 8e-13
Identities = 51/179 (28%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 19 LTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLET 78
L+ S++E ++ V+ LA+ + + + D Q + ++ +D + E
Sbjct: 509 LSASAEEVAETVASLADTAG----QAASAVDDGRQATEDAVETMDDVADD-------AEA 557
Query: 79 FANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRM 138
A+ + L + I +I D IA +A QTN++ALNASIEAAR G G GFAVVADE++ +
Sbjct: 558 AADAMDALDSEMADIGEIVDVIADIADQTNMLALNASIEAARTGADGDGFAVVADEVKTL 617
Query: 139 AVQTMNLAKEIKEFNSKVMDQLDALRDALK-VMDRIREGTEILGRDIQIIVDISNVLND 196
A ++ + A++I+ + Q+ + D ++ D + +G +G + D+ + + D
Sbjct: 618 AEESRDAAEDIESRLLALQGQVSDVADEMRATSDTVSDGRATVGDAATALDDVVSFVAD 676
>gb|AAD13223.1| (AF100302) methyl-accepting chemotaxis protein [Pseudomonas putida]
Length = 538
Score = 74.9 bits (181), Expect = 8e-13
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 23/168 (13%)
Query: 86 LVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNL 145
L + I ++ D I ++A+QT L+ALNA+IEAA AGEAGRGFAVVADE+R +A +T
Sbjct: 361 LAEEASNIGRVLDVIRAIAEQTKLLALNAAIEAAHAGEAGRGFAVVADEVRNLAQRTQTS 420
Query: 146 AKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFI 205
+EI+ +++ I+ T+ RD+Q + + +S E +Q +
Sbjct: 421 TQEIE-----------------RMISAIQSVTQEGVRDVQQSCEFAARSQTMSSEADQAL 463
Query: 206 ----NDIKRLKGIALALEKFSELQDRYNKELASLLRLLA--SEYSRSG 247
I + G+ L + +E Q + +E+ L ++ SE S +G
Sbjct: 464 TLIAERITEINGMNLVIASAAEEQAQVAREVDRNLVAISDISEQSTAG 511
>gb|AAG19989.1| (AE005080) Htr2 transducer; Htr2 [Halobacterium sp. NRC-1]
Length = 764
Score = 74.9 bits (181), Expect = 8e-13
Identities = 51/179 (28%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 19 LTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLET 78
L+ S++E ++ V+ LA+ + + + D Q + ++ +D + E
Sbjct: 508 LSASAEEVAETVASLADTAG----QAASAVDDGRQATEDAVETMDDVADD-------AEA 556
Query: 79 FANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRM 138
A+ + L + I +I D IA +A QTN++ALNASIEAAR G G GFAVVADE++ +
Sbjct: 557 AADAMDALDSEMADIGEIVDVIADIADQTNMLALNASIEAARTGADGDGFAVVADEVKTL 616
Query: 139 AVQTMNLAKEIKEFNSKVMDQLDALRDALK-VMDRIREGTEILGRDIQIIVDISNVLND 196
A ++ + A++I+ + Q+ + D ++ D + +G +G + D+ + + D
Sbjct: 617 AEESRDAAEDIESRLLALQGQVSDVADEMRATSDTVSDGRATVGDAATALDDVVSFVAD 675
>sp|P43500|FRZC_MYXXA FRZCD PROTEIN (FRIZZY AGGREGATION PROTEIN FRZCD)
>gi|94523|pir||C32185 Frz CD protein - Myxococcus
xanthus >gi|150089|gb|AAA25395.1| (J04157) FrzCD protein
[Myxococcus xanthus]
Length = 417
Score = 74.5 bits (180), Expect = 1e-12
Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 27/273 (9%)
Query: 3 IRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKEL 62
+R A+ L+ S + SS E + + E + + + I +N ++ + +E
Sbjct: 146 LRLSSSANQVLAASTQHETSSTEQAAAIHETTATME-ELKHASAQIAENAGSVARVAEET 204
Query: 63 DKFQR-------EFLPFFQRLET----FANEFNTLVQNLEYISKISDSIASVAKQTNLVA 111
R EF+ Q++ + A+ L + +E I + + I +A +++L+A
Sbjct: 205 LGAARAGRGAIGEFIQAMQQIRSDGVAVADSIAKLSKRVERIGTVVEVIDEIADRSDLLA 264
Query: 112 LNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMD 171
LNA++E +RAGEAG+GF++VA E+RR+A ++ KEIK +++ + A A +
Sbjct: 265 LNAALEGSRAGEAGKGFSIVAAEMRRLAENVLDSTKEIKNLITEIREATAAAAGAAEASK 324
Query: 172 RIREGTEILG-----------RDIQIIVDISNVLNDISKEQ----EQFINDIKRLKGIAL 216
E E LG +Q D + V+N +++Q EQ + + ++ +
Sbjct: 325 SATESGEKLGAVAAQAVEGILAGVQETSDAARVINLATQQQRTATEQVVASMAEIEDVTR 384
Query: 217 ALEKFSELQDRYNKELASLLRLLASEYSRSGGD 249
+ S+ EL L LA R D
Sbjct: 385 QTTQASKQATGAAAELTQLAGRLAELIKRFKAD 417
>pir||T44973 transducer protein htpIII [similarity] - Halobacterium salinarum
>gi|1654419|gb|AAB17880.1| (U75435) transducer HtA
protein [Halobacterium salinarum]
Length = 482
Score = 74.5 bits (180), Expect = 1e-12
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 77 ETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIR 136
++ ++ L +E I ++ D I +A+QTN++ALNASIEAA GE G GFAVVA+E++
Sbjct: 294 DSVTSDVEALQNRIEDIDEVVDVITGIAEQTNMLALNASIEAAPPGEEGEGFAVVAEEVK 353
Query: 137 RMAVQTMNLAKEIKEFNSKVM-DQLDALRDALKVMDRIREGT----EILGRDIQIIVDI- 190
+A + A I+ S++ D D + D + DRI + + + +I+ +
Sbjct: 354 ALAEDAQSNAGHIESLVSEIQRDTADTVTDLVTTTDRIEDAVAQVEDAMASFEEIVTAVE 413
Query: 191 ------SNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLL 236
SN+++D + EQ + IA +++ ++L D +A ++
Sbjct: 414 ATAERASNMVSDATNEQAASAEE------IAAMVDETADLADDITTAVADIV 459
>gb|AAD13198.1| (AF096317) putative methyl-accepting chemotaxis protein
[Desulfovibrio gigas]
Length = 649
Score = 74.5 bits (180), Expect = 1e-12
Identities = 71/240 (29%), Positives = 113/240 (46%), Gaps = 29/240 (12%)
Query: 9 ASGALSHSLRLTVSSKESSKIVSELA---EEISGKFMENNTLILDNIQKLSEIMKELDKF 65
A S ++ SS+ S+ SE A E+ S E ++ I N + + K
Sbjct: 350 AQNVASGDEEMSASSETLSQGASEQAASVEQCSSSMEEMSSSINQNAENARQTGSIASKA 409
Query: 66 QREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAG 125
++ E+ NT+ E KIS I +A+QT+L+ALNA++EAARAGE G
Sbjct: 410 AQD------AKESGEAVHNTVAAMKEIAGKIS-IIEEIARQTDLLALNAAVEAARAGEHG 462
Query: 126 RGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQ 185
RGFAVVA E+R++A ++ A EI + +S + V +R E L DIQ
Sbjct: 463 RGFAVVASEVRKLAERSQTAAAEINKLSS----------TSTAVAERAGTLLEKLVPDIQ 512
Query: 186 IIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDR---YNKELASLLRLLASE 242
D+ + S+EQ + LAL++ ++ + ++ELAS L+++
Sbjct: 513 KTADLVQEIAATSQEQNSGAGQVN------LALQQLDQVVQQNASASEELASTAEELSAQ 566
>pir||G82618 pilus biogenesis protein XF1953 [imported] - Xylella fastidiosa
(strain 9a5c) >gi|9107053|gb|AAF84755.1|AE004014_9
(AE004014) pilus biogenesis protein [Xylella fastidiosa]
Length = 693
Score = 74.5 bits (180), Expect = 1e-12
Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 41/272 (15%)
Query: 16 SLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQR 75
S ++ VS+ E+ LAE +G T + + I +++ ++++ + E QR
Sbjct: 420 SAKVAVSAHETQTTAMRLAEA-AGHQANQITTVSERISEIAASIEQVSRNSAESAEVAQR 478
Query: 76 LETFANE-------------------------FNTLVQNLEYISKISDSIASVAKQTNLV 110
A E L ++ + I I + I +++QTN++
Sbjct: 479 SVVIAAEGAGVVRETIQGMDQIRDQIQETSKRIKRLGESSQEIGSIVELINDISEQTNIL 538
Query: 111 ALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKV-MDQLDALRDALKV 169
ALNA+++AA AGEAGRGFA+VADE++R+A +T + + I+ + +D +A+ +
Sbjct: 539 ALNAAVQAASAGEAGRGFAIVADEVQRLAERTSSATRRIESLVRAIQVDTNEAVSSMEQT 598
Query: 170 MDRIREG---TEILGRDIQIIVDISNVLNDISK-------EQEQFINDIKRLKGIALALE 219
+ G E G + I +SN LN + K +Q DI + G+ +
Sbjct: 599 TAEVVSGARLAEDAGTALIEIEHVSNTLNHLIKNISIAAHQQAAAATDITQTMGVIRQIT 658
Query: 220 KFSELQDRYNKELASLLRL--LASEYSRSGGD 249
S+ K S+ RL LA+E RS +
Sbjct: 659 --SQTSQGAGKTAESIGRLAGLAAELRRSAAN 688
>pir||F82382 methyl-accepting chemotaxis protein VCA1069 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658515|gb|AAF96963.1| (AE004432) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 639
Score = 74.5 bits (180), Expect = 1e-12
Identities = 66/248 (26%), Positives = 120/248 (47%), Gaps = 35/248 (14%)
Query: 19 LTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREF---LPFFQR 75
+T + +++I S AE + ++ L D ++ + + +D+ +E +
Sbjct: 403 VTEMASATAEIASN-AENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISE 461
Query: 76 LETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEI 135
LE ANE +T++ +I +A+QTNL+ALNA+IEAARAGE GRGFAVVADE+
Sbjct: 462 LEVHANEISTILS----------TIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 511
Query: 136 RRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVM--------------DRIREGTEILG 181
R ++ +T +EI+ +K+ A+ VM ++ + +
Sbjct: 512 RVLSQRTHASTEEIQ---TKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAIS 568
Query: 182 RDIQIIVDISNVLNDISKEQEQFINDI----KRLKGIALALEKFSELQDRYNKELASLLR 237
IQ I D++ + ++EQ DI + ++ ++ L + ++ + K L ++ +
Sbjct: 569 EAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQ 628
Query: 238 LLASEYSR 245
L E SR
Sbjct: 629 ELNKEISR 636
>gb|AAA23567.1| (M13463) sensory transducer protein [Escherichia coli]
Length = 535
Score = 74.1 bits (179), Expect = 1e-12
Identities = 47/178 (26%), Positives = 92/178 (51%), Gaps = 20/178 (11%)
Query: 75 RLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADE 134
++ T + + + + I I I +A QTN++ALNA++EAARAGE GRGFAVVA E
Sbjct: 339 QVSTMTHTMQEIATSSQKIGDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE 398
Query: 135 IRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDI---- 190
+R +A ++ AKEIK + ++R+++G++++ ++DI
Sbjct: 399 VRNLASRSAQAAKEIKGLIE-------------ESVNRVQQGSKLVNNAAATMIDIVSSV 445
Query: 191 ---SNVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLASEYSR 245
++++ +I+ E+ I+++ +++ ++ +E A LA++ R
Sbjct: 446 TRVNDIMGEIASASEEQQRGIEQVAQAVSQMDQVTQQNASLVEEAAVATEQLANQADR 503
>pir||G82401 methyl-accepting chemotaxis protein VCA0923 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658359|gb|AAF96820.1| (AE004419) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 652
Score = 74.1 bits (179), Expect = 1e-12
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 21/159 (13%)
Query: 89 NLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKE 148
N+E + K+ I +A QTNL+ALNA+IEAARAGE+GRGFAVVADE+R +A +T E
Sbjct: 481 NIETVLKV---INDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTE 537
Query: 149 IKEFNSKVMD-----------QLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDI 197
I+ K+ D A+ E E + IQ I D++ +
Sbjct: 538 IRNMIEKLQSGANAVAVAMSHSKDTAASAVNQAQGANEALEKIRLAIQQISDMNIQIASA 597
Query: 198 SKEQ----EQFINDIKRLKGIALALEKFSELQDRYNKEL 232
++EQ E+ N+ ++K ++ ++ +E D N +
Sbjct: 598 AEEQSLVAEEINNNTVKIKDLS---DQVAESADEANMSM 633
>pir||H83106 chemotactic transducer PctC PA4307 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9950530|gb|AAG07695.1|AE004847_2 (AE004847)
chemotactic transducer PctC [Pseudomonas aeruginosa]
Length = 632
Score = 74.1 bits (179), Expect = 1e-12
Identities = 49/148 (33%), Positives = 84/148 (56%), Gaps = 19/148 (12%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
I +I + I +++QTNL+ALNA+IEAARAGEAGRGFAVVADE+R +A + A++I+
Sbjct: 462 IGQILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRAQESAQQIQ-- 519
Query: 153 NSKVMDQLD-ALRDALKVMDRIR----EGTEILGRDIQIIVDISNVLNDISKEQEQFIND 207
K++++L R+A+ M + E EI R + + +++ + +I +
Sbjct: 520 --KMIEELQVGAREAVATMTESQRYSLESVEIANRAGERLGSVTSRIGEIDSMNQ----- 572
Query: 208 IKRLKGIALALEKFSELQDRYNKELASL 235
+A A E+ + + D N ++ +
Sbjct: 573 -----SVATATEEQTAVVDSLNMDITEI 595
>gb|AAG19428.1| (AE005036) Htr13 transducer; Htr13 [Halobacterium sp. NRC-1]
Length = 423
Score = 74.1 bits (179), Expect = 1e-12
Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 30 VSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEFNTLVQN 89
++ A E++ + E +L D ++ ++++++ + ++ TL +
Sbjct: 198 IAASATEVNDRSDEAQSLATDGYERAVAVVEQVEAIH-------DGVTEVRHQTATLQDH 250
Query: 90 LEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMA---------- 139
E I I + I +A QTNL+ALNASIEAARA G GFAVVADE++ +A
Sbjct: 251 TEAIDDIVEVINDIADQTNLLALNASIEAARADAGGEGFAVVADEVKSLAEESKTQAEEI 310
Query: 140 --------VQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDIS 191
V+T N A + E ++ D L+A +L + I++ ++ +S
Sbjct: 311 EERVENIQVETRNAADTLVELETETEDSLEASTSSLDTFEEIKD----------LVTGVS 360
Query: 192 NVLNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASL 235
L++I E+ + L + +++ + D + E+AS+
Sbjct: 361 TSLDEIKSGTERQTESSEEL---TMMIDEAARKADTISDEVASM 401
>pir||B83107 chemotactic transducer PctA PA4309 [imported] - Pseudomonas
aeruginosa (strain PAO1) >gi|1255679|dbj|BAA09307.1|
(D50642) transducer [Pseudomonas aeruginosa]
>gi|9950532|gb|AAG07697.1|AE004847_4 (AE004847)
chemotactic transducer PctA [Pseudomonas aeruginosa]
Length = 629
Score = 73.7 bits (178), Expect = 2e-12
Identities = 49/148 (33%), Positives = 83/148 (55%), Gaps = 19/148 (12%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
I +I + I +++QTNL+ALNA+IEAARAGEAGRGFAVVADE+R +A + A++I+
Sbjct: 459 IGQILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRAQESAQQIQ-- 516
Query: 153 NSKVMDQLD-ALRDALKVMDRIR----EGTEILGRDIQIIVDISNVLNDISKEQEQFIND 207
K++++L R+A+ M + E EI R + + ++ + +I +
Sbjct: 517 --KMIEELQVGAREAVATMTESQRYSLESVEIANRAGESLSSVTRRIGEIDGMNQ----- 569
Query: 208 IKRLKGIALALEKFSELQDRYNKELASL 235
+A A E+ + + D N ++ +
Sbjct: 570 -----SVATATEEQTAVVDSLNMDITEI 592
>gb|AAB17882.1| (U75437) transducer HtC protein [Halobacterium salinarum]
Length = 792
Score = 73.7 bits (178), Expect = 2e-12
Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 35/259 (13%)
Query: 3 IRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNT---LILDNIQKLSEIM 59
+R++ A A S + + +S VSE ++IS E + D + LS +
Sbjct: 480 VRSIADAVDAASTDVHDAAEIRSASDQVSESVQDISADAEEQRDRLGTVGDEVHALSATV 539
Query: 60 KEL---------------------DKFQREFLPFFQRLETFANE----FNTLVQNLEYIS 94
+++ + + + +R+E A+ L + ++ I
Sbjct: 540 EDIAARPTTSPSTVNQAATESERGQELGEDAVAELERIEATADSAVERVTALEEAVDAIG 599
Query: 95 KISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNS 154
++ I +A+QTN++ALNA+IEAARA ++G GFAVVADE++ +A + A EI+
Sbjct: 600 HVTGVITDIAEQTNMLALNANIEAARADKSGDGFAVVADEVKDLADEVKESATEIETLVD 659
Query: 155 KVM-DQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFIND-----I 208
V D D + D ++ DR+ G+E + + + DI + + + + Q I+D
Sbjct: 660 DVQADVADTVADMSELGDRVDAGSETIEAALAAVDDIGDQV-EAANGSVQSISDATDEQA 718
Query: 209 KRLKGIALALEKFSELQDR 227
+ + +++ ++L DR
Sbjct: 719 ASTEEVVTMIDEVTDLSDR 737
>pir||F70028 transmembrane receptor taxis protein homolog yvaQ - Bacillus
subtilis >gi|2635882|emb|CAB15374.1| (Z99121) similar to
transmembrane receptor taxis protein [Bacillus subtilis]
Length = 566
Score = 73.7 bits (178), Expect = 2e-12
Identities = 57/218 (26%), Positives = 111/218 (50%), Gaps = 26/218 (11%)
Query: 7 EKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQ 66
E A +H + ++ ++S+ V ELA +SG EN L ++ + I++E
Sbjct: 321 ESIDKAYNHGITIS----DTSQNVLELA--VSGN--ENMATSLQQMKTIHHIVEEA---- 368
Query: 67 REFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGR 126
++ +L Q+ + I+K+ I +A+QTNL++LNA+IEAARAGE+G+
Sbjct: 369 -------------VHKVRSLEQHSQDINKLVQVINGIAEQTNLLSLNAAIEAARAGESGK 415
Query: 127 GFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALK-VMDRIREGTEILGRDIQ 185
GFAVVA+E+R++A + ++I + ++ + L+ + +GTE L Q
Sbjct: 416 GFAVVAEEVRKLADGVSDSVQDITRIVNGTQQEIHTVITYLESSFTEVEKGTENLTDTGQ 475
Query: 186 IIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSE 223
+ I + ++ ++ + +K+L ++ + + E
Sbjct: 476 AMQHIKQSVTHVADSIKEVTDGLKQLTNQSITINQSIE 513
>sp|P55652|Y4SI_RHISN PROBABLE CHEMORECEPTOR Y4SI (METHYL-ACCEPTING CHEMOTAXIS PROTEIN)
>gi|2182623|gb|AAB91848.1| (AE000096) Y4sI [Rhizobium
sp. NGR234]
Length = 756
Score = 73.4 bits (177), Expect = 2e-12
Identities = 73/277 (26%), Positives = 122/277 (43%), Gaps = 46/277 (16%)
Query: 8 KASGALSHSLRLTVSSKES-SKIVSEL--AEEISGKFMENNTLILDN-IQKLSEIMKELD 63
+A G L ++R + S S IVSE+ A ++ K E+ ++LD + + I ++
Sbjct: 476 RALGQLRETIRTVAAQAASMSSIVSEISCATDVLAKRTEHQAIVLDGAVNTMDAISNDVS 535
Query: 64 KFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIAS--------------------- 102
AN + LV++ + SD I S
Sbjct: 536 VTANA-----------ANNADALVRDAHSAAAASDEIVSSAIAGMLEIEESSAKIATIVS 584
Query: 103 ----VAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF----NS 154
+A QTNL+ALNA +EA+RAGEAG+GFAVVA E+R +A ++ + AKEIK+
Sbjct: 585 VIEEIAHQTNLLALNAGVEASRAGEAGKGFAVVASEVRALAQRSSDAAKEIKDLINVSTQ 644
Query: 155 KVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGI 214
+V + + A +++ I +++ + I + E + I +I +
Sbjct: 645 RVERGKELVDSASELLKHIAARVDLIRTTVSNIAATATSQAKHLSEFQTTIAEIDQSTQQ 704
Query: 215 ALALEKFSELQDR-YNKELASLLRLLASEYSRSGGDS 250
A+ + S+ R N E LL L+ ++ GG S
Sbjct: 705 TAAMAEESDAACRSLNAEAQHLLELI-QQFELGGGSS 740
>sp|P07018|MCP4_ECOLI METHYL-ACCEPTING CHEMOTAXIS PROTEIN IV (MCP-IV) (DIPEPTIDE
CHEMORECEPTOR PROTEIN) >gi|7428890|pir||QRECM2
methyl-accepting chemotaxis protein II - Escherichia
coli >gi|1736538|dbj|BAA15701.1| (D90830)
Methyl-accepting chemotaxis protein IV (MCP-IV)
(Dipeptide chemoreceptor protein). [Escherichia coli]
>gi|1736544|dbj|BAA15706.1| (D90831) Methyl-accepting
chemotaxis protein IV (MCP-IV) (Dipeptide chemoreceptor
protein). [Escherichia coli] >gi|1788194|gb|AAC74955.1|
(AE000282) methyl-accepting chemotaxis protein IV,
peptide sensor receptor [Escherichia coli K12]
Length = 533
Score = 73.4 bits (177), Expect = 2e-12
Identities = 53/165 (32%), Positives = 91/165 (55%), Gaps = 19/165 (11%)
Query: 75 RLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADE 134
++ T + + + + I I I +A QTN++ALNA++EAARAGE GRGFAVVA E
Sbjct: 339 QVSTMTHTMQEIATSSQKIGDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE 398
Query: 135 IRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDI-SNV 193
+R +A ++ AKEIK + ++R+++G++++ ++DI S+V
Sbjct: 399 VRNLASRSAQAAKEIKGLIE-------------ESVNRVQQGSKLVNNAAATMIDIVSSV 445
Query: 194 --LNDISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLL 236
+NDI E + +R GI + S++ D+ ++ ASL+
Sbjct: 446 TRVNDIMGEIASASEEQQR--GIEQVAQAVSQM-DQVTQQNASLV 487
>gb|AAG34156.1|AF312878_1 (AF312878) methyl-accepting chemotaxis protein McpW [Sinorhizobium
meliloti]
Length = 689
Score = 73.4 bits (177), Expect = 2e-12
Identities = 61/205 (29%), Positives = 101/205 (48%), Gaps = 24/205 (11%)
Query: 4 RTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELD 63
R EK + +L + + K +E AEE S M + T I N ++ I+ E
Sbjct: 376 RRTEKQAASLEQTSAALEEITVTVKTATERAEEAS--HMVDETRI--NAEESGRIVGEA- 430
Query: 64 KFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGE 123
+ R+E ++E I KI D I +A QTNL+ALNA +EAARAGE
Sbjct: 431 ------IAAMARIEGASSE----------IGKIIDVIDEIAFQTNLLALNAGVEAARAGE 474
Query: 124 AGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRD 183
AG+GFAVVA E+R +A + AK+IK S+ ++ ++ ++++ + +G
Sbjct: 475 AGKGFAVVAQEVRELAQRAAGAAKDIKALVSRSGNE---VKTGVRLVQETGDALGRIGAK 531
Query: 184 IQIIVDISNVLNDISKEQEQFINDI 208
+ I + + + ++EQ + +I
Sbjct: 532 VACINEHMSSIVMAAREQSTGLREI 556
>gb|AAA23566.1| (M13463) methyl-accepting chemotaxis protein II [Escherichia coli]
Length = 553
Score = 73.0 bits (176), Expect = 3e-12
Identities = 50/145 (34%), Positives = 80/145 (54%), Gaps = 13/145 (8%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
I+ I I +A QTN++ALNA++EAARAGE GRGFAVVA E+R +A ++ AKEIK
Sbjct: 359 IADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIK-- 416
Query: 153 NSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLK 212
+ + D + + +++ E + + + DI + S EQ + I+
Sbjct: 417 -ALIEDSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIDQ----- 470
Query: 213 GIALALEKFSELQDRYNKELASLLR 237
+ALA+ + DR ++ ASL++
Sbjct: 471 -VALAVSE----MDRVTQQNASLVQ 490
>sp|Q48318|HTR5_HALSA HALOBACTERIAL TRANSDUCER PROTEIN V >gi|11277601|pir||T46811
halobacterial transducer protein V [imported] -
Halobacterium salinarum >gi|1435132|emb|CAA64842.1|
(X95589) halobacterial transducer protein V
[Halobacterium salinarum] >gi|10581214|gb|AAG19985.1|
(AE005080) Htr7 transducer; Htr7 [Halobacterium sp.
NRC-1]
Length = 545
Score = 73.0 bits (176), Expect = 3e-12
Identities = 54/195 (27%), Positives = 98/195 (49%), Gaps = 26/195 (13%)
Query: 74 QRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA----GRGFA 129
+ ++T + L I I++ I+ +A+QTN++ALNA+IEAARAG G GFA
Sbjct: 319 ETMQTTVANVDALEDLTTEIDDIAELISDIAEQTNMLALNANIEAARAGSGGGSNGDGFA 378
Query: 130 VVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMD-RIREG------------ 176
VVADE++ +A ++ AK+I E +V Q + ++V + R+ +G
Sbjct: 379 VVADEVKELATESQRSAKDIAELIEEVQSQTATTVEEIRVAEQRVNDGAAAVEETVDAFG 438
Query: 177 --TEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALA-------LEKFSELQDR 227
TE + + +IS +++ ++ E+ ++ + + I+ A + SE Q
Sbjct: 439 AVTENIQETTDGVQEISQAMDEQAQRSERVVSSVDDIATISQATADRAENVSAASEEQTA 498
Query: 228 YNKELASLLRLLASE 242
E+ S L+ LA++
Sbjct: 499 SITEVTSSLQSLAAQ 513
>sp|P07017|MCP2_ECOLI METHYL-ACCEPTING CHEMOTAXIS PROTEIN II (MCP-II) (ASPARTATE
CHEMORECEPTOR PROTEIN) >gi|7428891|pir||QRECM4 aspartate
chemoreceptor protein - Escherichia coli
>gi|1736539|dbj|BAA15702.1| (D90830) Methyl-accepting
chemotaxis protein II (MCP-II) (Aspartate chemoreceptor
protein). [Escherichia coli] >gi|1736545|dbj|BAA15707.1|
(D90831) Methyl-accepting chemotaxis protein II (MCP-II)
(Aspartate chemoreceptor protein). [Escherichia coli]
>gi|1788195|gb|AAC74956.1| (AE000282) methyl-accepting
chemotaxis protein II, aspartate sensor receptor
[Escherichia coli K12]
Length = 553
Score = 73.0 bits (176), Expect = 3e-12
Identities = 50/145 (34%), Positives = 80/145 (54%), Gaps = 13/145 (8%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
I+ I I +A QTN++ALNA++EAARAGE GRGFAVVA E+R +A ++ AKEIK
Sbjct: 359 IADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIK-- 416
Query: 153 NSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLK 212
+ + D + + +++ E + + + DI + S EQ + I+
Sbjct: 417 -ALIEDSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIDQ----- 470
Query: 213 GIALALEKFSELQDRYNKELASLLR 237
+ALA+ + DR ++ ASL++
Sbjct: 471 -VALAVSE----MDRVTQQNASLVQ 490
>gb|AAC04467.1| (U33210) methyl accepting chemotaxis homolog [Treponema denticola]
Length = 644
Score = 73.0 bits (176), Expect = 3e-12
Identities = 53/166 (31%), Positives = 88/166 (52%), Gaps = 23/166 (13%)
Query: 3 IRTLEKASGALSH---SLRL-TVSSKESSKIVSELAEEIS--GKFMENNTLILDNIQKLS 56
+ T+E+ +G LS S+ + T S ESS +++ +AE K ++ N ++ + +
Sbjct: 448 VATVEQINGRLSRLVSSIEMQTESINESSVVITAMAENTVKIAKTLDQNNELIKTVYGQT 507
Query: 57 EIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASI 116
++ K+ + E + E + ++QN +A QTNL+A+NA+I
Sbjct: 508 KVGKDGARTANEIVKQIAEKSASLLEASQIIQN-------------IASQTNLLAMNAAI 554
Query: 117 EAARAGEAGRGFAVVADEIRRMA----VQTMNLAKEIKEFNSKVMD 158
EAA AGE+G+GFAVVADEIR++A +Q +A IKE + D
Sbjct: 555 EAAHAGESGKGFAVVADEIRKLAEGSNLQGKQIAAVIKETTEIIHD 600
>pir||T03424 probable methylation accepting chemotaxis protein mcpA -
Agrobacterium tumefaciens plasmid pTiC58
>gi|3153186|gb|AAC17211.1| (AF010180) McpA
[Agrobacterium tumefaciens]
Length = 579
Score = 73.0 bits (176), Expect = 3e-12
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 16/250 (6%)
Query: 6 LEKASGALSHSLR-LTVSSKESSKIVSELA----------EEISGKFMENNTLILDNIQK 54
L++A ++ + R ++ S E ELA EE + E T + D+ ++
Sbjct: 291 LKRAMATVADNARAISAGSSEIRTAADELAKRTEQQAASVEETAAALEEITTTVKDSSRR 350
Query: 55 LSEIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNA 114
E + + + + + + + + + IS I I +A QTN +ALNA
Sbjct: 351 AEEAGQLVARTREHAEHSGEVVRDAIGAMDQIETSSREISNIIGVIDEIAFQTNHLALNA 410
Query: 115 SIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF----NSKVMDQLDALRDALKVM 170
+EAARAGEAG+GFAVVA E+R +A ++ AKEIK S+V + + A +
Sbjct: 411 GVEAARAGEAGKGFAVVAQEVRELAQRSAKAAKEIKTLITSSGSQVQSGVSLVTKAGSAL 470
Query: 171 DRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKR-LKGIALALEKFSELQDRYN 229
I + ++ IV+ + ++ E + +N + + + A +E+ +
Sbjct: 471 QEIATQVHDINTNVVAIVEAAREQSNALGEINKAVNSVDQGTQQNAAMVEEQTAASHSLA 530
Query: 230 KELASLLRLL 239
+E A+L LL
Sbjct: 531 REAAALFELL 540
>gb|AAG19968.1| (AE005078) Htr17 transducer; Htr17 [Halobacterium sp. NRC-1]
Length = 536
Score = 73.0 bits (176), Expect = 3e-12
Identities = 46/165 (27%), Positives = 88/165 (52%), Gaps = 7/165 (4%)
Query: 77 ETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIR 136
E +E N L + I ++ D I + QT+L+ALNASIEAARA + G GFAVVA E++
Sbjct: 311 EAVVSEANALAAEAQEIRRVVDLINDITDQTHLLALNASIEAARADQDGDGFAVVAAEVK 370
Query: 137 RMAVQTMNLAKEIKEFNSKVMDQLDA-LRDALKVMDRIREGTEILGRDIQIIVDISNVLN 195
+A +T EI+ ++ + + D+ ++ + GTE + + + +I + +
Sbjct: 371 ELAEETNEATDEIETLVDNLLSSTQSVVDDSEQMAATVSSGTETVENALTALEEIGDHVT 430
Query: 196 DISKEQEQFINDIKRLKGIAL-----ALEKFSELQDRYNKELASL 235
D+++ +Q I+D + + +E+ ++ ++ + E AS+
Sbjct: 431 DVNEAVQQ-IDDATDAQAASADTTVSMIEEIEDISEQNSSEAASV 474
>emb|CAA23676.1| (V00373) serine chemoreceptor [Escherichia coli]
>gi|223623|prf||0903250A protein,tsr transducer
[Escherichia coli]
Length = 536
Score = 72.6 bits (175), Expect = 4e-12
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 84 NTLVQNLEYISKISDSIASV-------AKQTNLVALNASIEAARAGEAGRGFAVVADEIR 136
+ +VQ + IS S IA + A QTN++ALNA++EAARAGE GRGFAVVA E+R
Sbjct: 345 DNVVQTMRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR 404
Query: 137 RMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLND 196
+A ++ A+EIK S + D + + +++ E + + + DI +
Sbjct: 405 NLAQRSAQAAREIK---SLIEDSVGKVDVGSTLVESAGETMAEIVSAVTRVTDIMGEIAS 461
Query: 197 ISKEQEQFINDIKRLKGIALA-LEKFSELQDRYNKELASLLRLLASEYSR 245
S EQ + I+ + G+A+A +++ ++ +E A+ L + SR
Sbjct: 462 ASDEQSRGIDQV----GLAVAEMDRVTQQNAALVEESAAAAAALEEQASR 507
>sp|P02942|MCP1_ECOLI METHYL-ACCEPTING CHEMOTAXIS PROTEIN I (MCP-I) (SERINE CHEMORECEPTOR
PROTEIN) >gi|7428892|pir||QRECS serine chemoreceptor
protein - Escherichia coli >gi|148077|gb|AAA24700.1|
(J01718) methyl-accepting chemotaxis protein I
[Escherichia coli] >gi|2367378|gb|AAC77311.1| (AE000506)
methyl-accepting chemotaxis protein I, serine sensor
receptor [Escherichia coli K12]
Length = 551
Score = 72.6 bits (175), Expect = 4e-12
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 84 NTLVQNLEYISKISDSIASV-------AKQTNLVALNASIEAARAGEAGRGFAVVADEIR 136
+ +VQ + IS S IA + A QTN++ALNA++EAARAGE GRGFAVVA E+R
Sbjct: 345 DNVVQTMRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR 404
Query: 137 RMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLND 196
+A ++ A+EIK S + D + + +++ E + + + DI +
Sbjct: 405 NLAQRSAQAAREIK---SLIEDSVGKVDVGSTLVESAGETMAEIVSAVTRVTDIMGEIAS 461
Query: 197 ISKEQEQFINDIKRLKGIALA-LEKFSELQDRYNKELASLLRLLASEYSR 245
S EQ + I+ + G+A+A +++ ++ +E A+ L + SR
Sbjct: 462 ASDEQSRGIDQV----GLAVAEMDRVTQQNAALVEESAAAAAALEEQASR 507
>sp|P42258|HTR2_HALVA SENSORY RHODOPSIN II TRANSDUCER (HTR-II) (METHYL-ACCEPTING
PHOTOTAXIS PROTEIN II) (MPP-II) >gi|1364151|pir||S55296
sensory rhodopsin II transducer protein - Haloarcula
vallismortis (fragment) >gi|516322|emb|CAA84549.1|
(Z35308) transducer of sensory rhodopsin II [Haloarcula
vallismortis]
Length = 433
Score = 72.6 bits (175), Expect = 4e-12
Identities = 62/222 (27%), Positives = 105/222 (46%), Gaps = 29/222 (13%)
Query: 14 SHSLRLTVSSKESSKIVSELAE---------EISGKFMENNTL-----------ILDNIQ 53
S++ R+ +SK+ SK ++E+ E E + M+N + + D Q
Sbjct: 129 SNAERVDRASKQVSKSINEIFEGTTEQNEGLESAAAEMQNLSATAQQVASSAQQVADTSQ 188
Query: 54 KLSEIMKELDKFQREFLPFFQRLET----FANEFNTLVQNLEYISKISDSIASVAKQTNL 109
+++ ++ + +E + +E E N L L+ I +I I S+ +QTN+
Sbjct: 189 SAAKVGEDGREAAQEAIAEMSAIEAETGETVEEINALDDELDEIGEIVGVITSIVEQTNM 248
Query: 110 VALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQL-DALRDALK 168
+ALNASIEAA A G GFAVVADEI+ +A +T A +I+ + +Q D +
Sbjct: 249 LALNASIEAAHADGDGEGFAVVADEIKGLAEETKEAAADIEGRIEAIQEQAGDTVETMES 308
Query: 169 VMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKR 210
RI EG ++ VD + + ++E + I +I R
Sbjct: 309 TSTRITEGVS----TVEETVDALETIVEYTEEVDTGIQEIDR 346
>pir||T44989 transducer protein trII [imported] - Haloarcula vallismortis
>gi|5921503|emb|CAB56464.1| (AJ249640) trII protein
[Haloarcula vallismortis]
Length = 773
Score = 72.6 bits (175), Expect = 4e-12
Identities = 62/222 (27%), Positives = 105/222 (46%), Gaps = 29/222 (13%)
Query: 14 SHSLRLTVSSKESSKIVSELAE---------EISGKFMENNTL-----------ILDNIQ 53
S++ R+ +SK+ SK ++E+ E E + M+N + + D Q
Sbjct: 469 SNAERVDRASKQVSKSINEIFEGTTEQNEGLESAAAEMQNLSATAQQVASSAQQVADTSQ 528
Query: 54 KLSEIMKELDKFQREFLPFFQRLET----FANEFNTLVQNLEYISKISDSIASVAKQTNL 109
+++ ++ + +E + +E E N L L+ I +I I S+ +QTN+
Sbjct: 529 SAAKVGEDGREAAQEAIAEMSAIEAETGETVEEINALDDELDEIGEIVGVITSIVEQTNM 588
Query: 110 VALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQL-DALRDALK 168
+ALNASIEAA A G GFAVVADEI+ +A +T A +I+ + +Q D +
Sbjct: 589 LALNASIEAAHADGDGEGFAVVADEIKGLAEETKEAAADIEGRIEAIQEQAGDTVETMES 648
Query: 169 VMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKR 210
RI EG ++ VD + + ++E + I +I R
Sbjct: 649 TSTRITEGVS----TVEETVDALETIVEYTEEVDTGIQEIDR 686
>pir||C82206 methyl-accepting chemotaxis protein VC1403 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655898|gb|AAF94560.1| (AE004218) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 641
Score = 72.6 bits (175), Expect = 4e-12
Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 15/233 (6%)
Query: 6 LEKASGAL----SHSLRLTVSSKESSKIV--SELAEEISGKFM-ENNTLILDNIQKLSEI 58
LE++S A+ S ++ V ++ESS SE A F+ E T + Q L+++
Sbjct: 62 LEESSSAMTQLRSSMEQIAVGAEESSSATKQSETAVSQMNNFINEQATYATQSKQILTKL 121
Query: 59 MKELDKFQREFLPFFQRLETFANEFNTLVQNL----EYISKISDSIASV---AKQTNLVA 111
+++ + ++T + N V+ + E +KI+D++ V A QTNL+A
Sbjct: 122 EQDIVDVANKINEMVSNVQTSSERQNDSVKRMIELSEQAAKINDAVKQVIHIADQTNLLA 181
Query: 112 LNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMD 171
LNA+IEA RAG+ G+GFAVVAD +R +A + A I+ + + + + + +K
Sbjct: 182 LNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNAANIESLIKDISNGAEMVSNGVKSSS 241
Query: 172 RIREGTEILGRDI-QIIVDISNVLNDISKEQEQFINDIKRLKGIALALEKFSE 223
+ E G + + + I N + D+ K+ E + + A+ K SE
Sbjct: 242 QKAESEVQKGHVVNKQLTLIRNEMVDLVKDSEVLLKAADEMSSAAVIALKGSE 294
Score = 68.7 bits (165), Expect = 6e-11
Identities = 51/183 (27%), Positives = 94/183 (50%), Gaps = 22/183 (12%)
Query: 81 NEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAV 140
NE + + I KI D I++V+ QT ++A+N ++EAARAGE G+GFAVV+ +I+ +A
Sbjct: 451 NEMANIERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLAN 510
Query: 141 QTMNLAKEIKEFNSKVMDQLDALR-DALKVMDRIREGTEILGRDIQIIVDISNVLNDI-- 197
A++IK+ + +Q++ +R D ++ + E + I+ + ++ + ++D+
Sbjct: 511 DAAENAEQIKDQVKNIQEQINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVL 570
Query: 198 -SKEQEQFINDIKR--------LKGIALALEKFSEL----------QDRYNKELASLLRL 238
SK + I+R ++ IA A E+ S Q ELAS +
Sbjct: 571 GSKRISESAGGIERSIADARAGMQQIATAAEESSHATGEAATAARQQSSSTSELASAIEN 630
Query: 239 LAS 241
+A+
Sbjct: 631 IAA 633
>pir||F82148 methyl-accepting chemotaxis protein VC1859 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9656388|gb|AAF95007.1| (AE004261) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 706
Score = 72.6 bits (175), Expect = 4e-12
Identities = 62/259 (23%), Positives = 121/259 (45%), Gaps = 30/259 (11%)
Query: 3 IRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKEL 62
+ T E+ + + R + + + V+ AEE++ + + +++N Q+ +
Sbjct: 438 VSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMT----QTSAHVVENAQRAVNAASDA 493
Query: 63 DKF-----------QREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVA 111
+ Q + R+ L +N I +I I +++QTNL+A
Sbjct: 494 QRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLA 553
Query: 112 LNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKV----MDQLDALR--- 164
LNA+IEAARAGE GRGFAVVADE+R +A +T EI+ +KV D + A++
Sbjct: 554 LNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSN 613
Query: 165 -DALKVMDRIREGTEILGR---DIQIIVDISNVLNDISKEQE----QFINDIKRLKGIAL 216
A +++ + L R I I ++S+ + +++Q+ Q + ++ ++
Sbjct: 614 ETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSA 673
Query: 217 ALEKFSELQDRYNKELASL 235
+ +E ++ +++A L
Sbjct: 674 QILSETEASEKVGEQIARL 692
>pir||A82513 methyl-accepting chemotaxis protein VCA0008 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9657386|gb|AAF95922.1| (AE004344) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 553
Score = 72.2 bits (174), Expect = 5e-12
Identities = 67/235 (28%), Positives = 113/235 (47%), Gaps = 28/235 (11%)
Query: 19 LTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLET 78
+T +++E S + A+ S K E+N + NI ++ + + E +
Sbjct: 320 MTTTAQEISNNANNAAQ--SAKDAEDNATDVHNI--VNAAARSVQALAEEVADASSVIAK 375
Query: 79 FANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRM 138
+ N + +L I I A+QTNL+ALNA+IEAARAGE GRGFAVVADE+R++
Sbjct: 376 LEGDVNNITSSLAVIQDI-------AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKL 428
Query: 139 AVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDIS 198
A +T ++I ++ DA A+K M+ ++ R I + + + +
Sbjct: 429 ASRTQESTQQIHTMIQQLKAGSDA---AVKAMESSQQ------RSITTVREANAAAEALQ 479
Query: 199 KEQEQF--INDIKRLKGIALALEKFSELQDRYNKELASLLRLLASEYSRSGGDSN 251
K Q I D+ L IA A E+ Q +E++ + +++ + S S +N
Sbjct: 480 KIQASIGTIMDMNAL--IATATEE----QSIVGQEISQRIVVISDQSSESADLAN 528
>pir||C83440 probable chemotaxis transducer PA1646 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9947615|gb|AAG05035.1|AE004592_6 (AE004592) probable
chemotaxis transducer [Pseudomonas aeruginosa]
Length = 652
Score = 72.2 bits (174), Expect = 5e-12
Identities = 52/171 (30%), Positives = 93/171 (53%), Gaps = 20/171 (11%)
Query: 74 QRLETFANEFNTLVQNLEYIS-------KISDSIASVAKQTNLVALNASIEAARAGEAGR 126
+R+E A ++E +S + D I SVA+QTNL+ALNA+IEAARAG+ GR
Sbjct: 456 ERIERLAEAVRAATASVEALSADSQRIGSVLDVIKSVAEQTNLLALNAAIEAARAGDQGR 515
Query: 127 GFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDAL-KVMDRIREGTEILGRDIQ 185
GFAVVADE+R +A +T EI+ + AL++ + + R++ +++ + +
Sbjct: 516 GFAVVADEVRALARRTQQSTAEIETL-------IGALQNGTQQAVQRMQRSHQLVDQSVD 568
Query: 186 IIVDISNVLNDISKEQEQFINDIKRL-KGIALALEKFSELQDRYNKELASL 235
+ L +I+ + I+++ + IA A E+ S + + N+ + ++
Sbjct: 569 DALQTEAALGNIATA----VALIQQMNQQIAAASEQQSAVAEEINRSVTAI 615
>gb|AAC46419.1| (U81828) methylation accepting chemotaxis protein [Rhizobium
leguminosarum]
Length = 624
Score = 71.8 bits (173), Expect = 7e-12
Identities = 49/145 (33%), Positives = 74/145 (50%), Gaps = 28/145 (19%)
Query: 6 LEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKF 65
LE+ + AL +S + ++ +L EE + T++ D I +
Sbjct: 365 LEQTAAALDEVTTTVRTSSQRAENAGKLVEETKRSAHVSATVVRDAIGAMD--------- 415
Query: 66 QREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAG 125
R++T +++ I +I I +A QTNL+ALNA +EAARAGEAG
Sbjct: 416 ---------RIQTSSSQ----------IGRIIGVIDEIAFQTNLLALNAGVEAARAGEAG 456
Query: 126 RGFAVVADEIRRMAVQTMNLAKEIK 150
+GFAVVA E+R +A ++ N AKEIK
Sbjct: 457 KGFAVVAQEVRELAQRSANAAKEIK 481
>gi|10954729 hypothetical chemoreceptor gene~similar to orf2 gene in pTi15955
[Agrobacterium rhizogenes] >gi|8918729|dbj|BAA97794.1|
(AB039932) hypothetical chemoreceptor gene~similar to
orf2 gene in pTi15955 [Agrobacterium rhizogenes]
>gi|10567393|dbj|BAB16202.1| (AP002086) hypothetical
chemoreceptor gene~similar to orf2 gene in pTi15955
[Agrobacterium rhizogenes]
Length = 723
Score = 71.8 bits (173), Expect = 7e-12
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 6/150 (4%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
I +I+ I +A QTNL+ALNA +EAARAGEAG+GFAVVA E+R +A ++ AKEIK
Sbjct: 542 IEQITGVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAKAAKEIKVL 601
Query: 153 NSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLK 212
+K +++ ++E +L + IV IS + I++ + ++ +
Sbjct: 602 INKSTAEVNT------GSHLVQETGAVLAKISTQIVTISQHVETIARGSHDQSSALQGVN 655
Query: 213 GIALALEKFSELQDRYNKELASLLRLLASE 242
+++ ++ +E + R LAS+
Sbjct: 656 STVNQMDQMTQHNAAMVEETTAASRELASQ 685
>gb|AAG34155.1|AF312877_1 (AF312877) methyl-accepting chemotaxis protein McpV [Sinorhizobium
meliloti]
Length = 604
Score = 71.8 bits (173), Expect = 7e-12
Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 3 IRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEI---M 59
+ L GA+S S + S +SE A +S + + + + L EI +
Sbjct: 334 VAALRDVIGAISRSTEIVHGSAAD---ISEAANNLSRRTEQQAAALEETAAALDEITSTV 390
Query: 60 KELDKFQREFLPFFQRLETFANEFNTLVQNL-----------EYISKISDSIASVAKQTN 108
+ E + A + +V+N IS+I I +A QTN
Sbjct: 391 RHASGRALEARDMVDETKASAAKSGDIVRNAIDAMGRIEASSSRISQIIGVIDEIAFQTN 450
Query: 109 LVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIK 150
L+ALNA +EAARAGEAGRGFAVVA E+R +A ++ AKEIK
Sbjct: 451 LLALNAGVEAARAGEAGRGFAVVAQEVRELAQRSAGAAKEIK 492
>pir||S56581 methyl-accepting chemotaxis protein I - Escherichia coli
>gi|537197|gb|AAA97252.1| (U14003) CG Site No. 63;
alternate gene name cheD [Escherichia coli]
Length = 551
Score = 71.4 bits (172), Expect = 9e-12
Identities = 54/170 (31%), Positives = 89/170 (51%), Gaps = 15/170 (8%)
Query: 84 NTLVQNLEYISKISDSIASV-------AKQTNLVALNASIEAARAGEAGRGFAVVADEIR 136
+ +VQ + IS S IA + A QTN++ALNA++EAARAGE GRGFAVVA E+R
Sbjct: 345 DNVVQTMRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR 404
Query: 137 RMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLND 196
+A ++ A+EIK S + D + + +++ E + + + DI +
Sbjct: 405 NLAQRSAQAAREIK---SLIEDSVGKVDVGSTLVESAGETMAEIVSAVTRVTDIMGEIAS 461
Query: 197 ISKEQEQFINDIKRLKGIALA-LEKFSELQDRYNKELASLLRLLASEYSR 245
S EQ + I+ + G+A+A +++ ++ +E A+ L SR
Sbjct: 462 ASDEQSRGIDQV----GLAVAEMDRVTQQNAALVEESAAAAAALEEXASR 507
>pir||T44938 transducer protein htpV [similarity] - Halobacterium salinarum
>gi|1621047|gb|AAB17519.1| (U53365) transducer HtI
protein [Halobacterium salinarum]
Length = 544
Score = 71.4 bits (172), Expect = 9e-12
Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 26/195 (13%)
Query: 74 QRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEA----GRGFA 129
+ ++T + L I I++ I+ +A+QTN++ALNA+IEAARAG G GFA
Sbjct: 318 ETMQTTVANVDALEDLTTEIDDIAELISDIAEQTNMLALNANIEAARAGSGGGTNGDGFA 377
Query: 130 VVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMD-RIREG------------ 176
VVADE++ +A ++ AK+I E +V Q + ++V + R+ +G
Sbjct: 378 VVADEVKELATESQRSAKDIAELIEEVQSQTATTVEEIRVAEQRVNDGAAAVEETVDAFG 437
Query: 177 --TEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALA-------LEKFSELQDR 227
TE + + +IS +++ ++ E+ ++ + + I+ A + SE Q
Sbjct: 438 AVTENIQETTDGVQEISQAMDEQAQRSERVVSSVDDIATISQATADRAENVSAASEEQTA 497
Query: 228 YNKELASLLRLLASE 242
E+ L+ LA++
Sbjct: 498 SITEVTGSLQSLAAQ 512
>dbj|BAA23413.1| (D86947) chemotactic transducer [Pseudomonas aeruginosa]
Length = 629
Score = 71.4 bits (172), Expect = 9e-12
Identities = 48/148 (32%), Positives = 83/148 (55%), Gaps = 19/148 (12%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
I +I + I +++QTNL+ALNA+IEAARAGEAGRGFAVVADE+R +A + A++I+
Sbjct: 459 IGQILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRAQESAQQIQ-- 516
Query: 153 NSKVMDQLD-ALRDALKVMDRIR----EGTEILGRDIQIIVDISNVLNDISKEQEQFIND 207
K++++L ++A+ M + E EI R + + ++ + +I +
Sbjct: 517 --KMIEELQIGAQEAVSTMTESQRYSLESVEIANRAGERLSSVTGRIAEIDGMNQ----- 569
Query: 208 IKRLKGIALALEKFSELQDRYNKELASL 235
+A A E+ + + D N ++ +
Sbjct: 570 -----SVATATEEQTAVVDSLNMDITEI 592
>pir||T44258 transducer protein htrXIII [similarity] - Halobacterium salinarum
>gi|4104483|gb|AAD02051.1| (AF036230) soluble transducer
HtrXIII [Halobacterium salinarum]
Length = 423
Score = 71.4 bits (172), Expect = 9e-12
Identities = 52/212 (24%), Positives = 109/212 (50%), Gaps = 14/212 (6%)
Query: 30 VSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQREFLPFFQRLETFANEFNTLVQN 89
++ A E++ + E +L D ++ ++++++ + ++ TL +
Sbjct: 198 IAASATEVNDRSDEAQSLATDGYERAVAVVEQVEAIH-------DGVTEVRHQTATLQDH 250
Query: 90 LEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEI 149
E I I + I +A QTNL+ALNASIEAARA G+GFAVVADE++ +A ++ A+EI
Sbjct: 251 TEAIDDIVEVINDIADQTNLLALNASIEAARADAGGQGFAVVADEVKSLAEESKTQAEEI 310
Query: 150 KE--FNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFIND 207
+E N +V ++ A ++++ + E + +I +++ +S ++ +
Sbjct: 311 EERVENIQVETRISA-DSSVELETETEDSLESSTFSLDTFEEIKDLVTGVSTSLDEIKSG 369
Query: 208 IKR----LKGIALALEKFSELQDRYNKELASL 235
+R + + + +++ + D + E+AS+
Sbjct: 370 TERQTESSEELTMMIDEAARKADTISDEVASM 401
>pir||C83107 chemotactic transducer PctB PA4310 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9950533|gb|AAG07698.1|AE004847_5 (AE004847)
chemotactic transducer PctB [Pseudomonas aeruginosa]
Length = 629
Score = 71.4 bits (172), Expect = 9e-12
Identities = 48/148 (32%), Positives = 83/148 (55%), Gaps = 19/148 (12%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
I +I + I +++QTNL+ALNA+IEAARAGEAGRGFAVVADE+R +A + A++I+
Sbjct: 459 IGQILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRAQESAQQIQ-- 516
Query: 153 NSKVMDQLD-ALRDALKVMDRIR----EGTEILGRDIQIIVDISNVLNDISKEQEQFIND 207
K++++L ++A+ M + E EI R + + ++ + +I +
Sbjct: 517 --KMIEELQIGAQEAVSTMTESQRYSLESVEIANRAGERLSSVTGRIAEIDGMNQ----- 569
Query: 208 IKRLKGIALALEKFSELQDRYNKELASL 235
+A A E+ + + D N ++ +
Sbjct: 570 -----SVATATEEQTAVVDSLNMDITEI 592
>pdb|1QU7|A Chain A, Four Helical-Bundle Structure Of The Cytoplasmic Domain Of
A Serine Chemotaxis Receptor >gi|9955272|pdb|1QU7|B
Chain B, Four Helical-Bundle Structure Of The
Cytoplasmic Domain Of A Serine Chemotaxis Receptor
Length = 227
Score = 71.4 bits (172), Expect = 9e-12
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 20/165 (12%)
Query: 84 NTLVQNLEYISKISDSIASV-------AKQTNLVALNASIEAARAGEAGRGFAVVADEIR 136
+ +VQ + IS S IA + A QTN++ALNA++EAARAGE GRGFAVVA E+R
Sbjct: 52 DNVVQTMRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR 111
Query: 137 RMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLND 196
+A ++ A+EIK S + D + + +++ E + + + DI +
Sbjct: 112 NLAQRSAQAAREIK---SLIEDSVGKVDVGSTLVESAGETMAEIVSAVTRVTDIMGEIAS 168
Query: 197 ISKEQEQFINDIKRLKGIALALEKFSELQDRYNKELASLLRLLAS 241
S EQ + I+ + G+A+A DR ++ A+L+ A+
Sbjct: 169 ASDEQSRGIDQV----GLAVA------EMDRVTQQNAALVEQSAA 203
>gb|AAG19122.1| (AE005010) Htr16 transducer; Htr16 [Halobacterium sp. NRC-1]
Length = 628
Score = 71.0 bits (171), Expect = 1e-11
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 7 EKASGALSHSLRLTVSSKE---SSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELD 63
EK + A L+ + +E SS V++ AE+ + + D I ++ I +
Sbjct: 368 EKLTAAAGEMTDLSATVEEIASSSNNVAQQAEDAAAMGQDGQAAATDAIAEMDAIESKAT 427
Query: 64 KFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGE 123
+ E +L + + IS I I +A QT+++A+NASIEA A
Sbjct: 428 QT--------------VEEMQSLQEEVGRISDIVTMIDDIASQTDMLAINASIEAENAST 473
Query: 124 AGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDAL-RDALKVMDRIREGTEILGR 182
+G GFAVVADE++ +A T E++ ++V AL D ++ DR+ +G + +
Sbjct: 474 SGDGFAVVADEVKSLAEDTATATDEVESLIAEVEASTSALAEDMYEMRDRVGDGQDTITD 533
Query: 183 DIQIIVDISNVLNDISKEQEQFIND 207
++ DI + + D + Q IND
Sbjct: 534 TAALLEDIVDRVED-ANAGIQSIND 557
>gb|AAD13638.1| (U84257) methyl-accepting chemotaxis protein B [Treponema
denticola]
Length = 369
Score = 70.6 bits (170), Expect = 2e-11
Identities = 51/222 (22%), Positives = 108/222 (47%), Gaps = 15/222 (6%)
Query: 3 IRTLEKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKEL 62
+RT+++ + ++ + S S+ + E+ I+ I ++K +++K L
Sbjct: 136 VRTIKQLNNSIENQ---AASVARSTASIEEMVANIAS--------ITQTLEKTYDVVKNL 184
Query: 63 DKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAG 122
+ + + T + + + + + S I +A QTNL+A+NA+IEAA AG
Sbjct: 185 ASATEDGK---ETIITSNSVTQKIAEESGSLMEASSVIQHIASQTNLLAMNAAIEAAHAG 241
Query: 123 EAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGR 182
EAG+GFAVVADEIR++A + K I + ++++L + K ++ L
Sbjct: 242 EAGKGFAVVADEIRKLAEDSATQGKTITSTLKTLSSEIESLSVSSKTVEDKFSTIFNLSE 301
Query: 183 DIQIIVD-ISNVLNDISKEQEQFINDIKRLKGIALALEKFSE 223
++ + D ++ +++ ++ + IK + + + ++ SE
Sbjct: 302 QVKSMSDRLTEAMHEQENGSKEVLGAIKNINTVTVEVQAGSE 343
>sp|P21822|MCPS_ENTAE METHYL-ACCEPTING CHEMOTAXIS SERINE TRANSDUCER >gi|95558|pir||C32302
serine transducer tse - Enterobacter aerogenes
>gi|148349|gb|AAA24797.1| (M26411) tse [Enterobacter
aerogenes]
Length = 557
Score = 70.2 bits (169), Expect = 2e-11
Identities = 47/156 (30%), Positives = 87/156 (55%), Gaps = 13/156 (8%)
Query: 86 LVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNL 145
+ + + I+ I+ I +A QTN++ALNA++EAARAGE GR FAVVA E+R +A ++
Sbjct: 356 IASSSQKIADITGVIDVIAFQTNILALNAAVEAARAGEQGRAFAVVAGEVRNLAQRSAQA 415
Query: 146 AKEIKEFNSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFI 205
AKEIK ++++D + L + + +G + + +++++ +I+ ++
Sbjct: 416 AKEIKALIEDSVNRVD-MGSVL-----VESAGDTMGDIVNAVTRVTDIMGEIASASDE-- 467
Query: 206 NDIKRLKGIALALEKFSELQDRYNKELASLLRLLAS 241
+ +GI + E+ DR ++ ASL+ AS
Sbjct: 468 ----QSRGIDQVGQAVREM-DRVTQQNASLVEESAS 498
>pir||B82203 methyl-accepting chemotaxis protein VC1405 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655901|gb|AAF94562.1| (AE004219) methyl-accepting
chemotaxis protein [Vibrio cholerae]
Length = 595
Score = 70.2 bits (169), Expect = 2e-11
Identities = 50/166 (30%), Positives = 83/166 (49%), Gaps = 14/166 (8%)
Query: 7 EKASGALSHSLRLTVSSKESSKIVSELAEEISGKFMENNTLILDNIQKLSEIMKELDKFQ 66
E+ + A++ + +T++ SS +E + + + EN D + K + +L
Sbjct: 352 EQVTSAMAQ-MAITITEVASS---AEESSAATARAQENARYSCDVLGKTETVSSQLVANA 407
Query: 67 REFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNASIEAARAGEAGR 126
++ LE + + V +E IS+ QTNL+ALNA+IEAARAGE GR
Sbjct: 408 QQSQQMIVELEASTRQIESFVLVVEGISE----------QTNLLALNAAIEAARAGEQGR 457
Query: 127 GFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDR 172
GFAVVADE+R +A ++ EIK ++++ + + DR
Sbjct: 458 GFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDR 503
>pir||F81369 probable MCP-domain signal transduction protein Cj0951c [imported]
- Campylobacter jejuni (strain NCTC 11168)
>gi|6968388|emb|CAB73208.1| (AL139076) putative
MCP-domain signal transduction protein [Campylobacter
jejuni]
Length = 224
Score = 69.9 bits (168), Expect = 3e-11
Identities = 43/196 (21%), Positives = 97/196 (48%), Gaps = 12/196 (6%)
Query: 55 LSEIMKELDKFQREFLPFFQRLETFANEFNTLVQNLEYISKISDSIASVAKQTNLVALNA 114
L +++K L + Q A + +V I K + + +A +TNL++LNA
Sbjct: 16 LEQMLKSLFNVANKVSTVSQNENELAKKVENMVNQAGNIQKATQMMDEIADKTNLLSLNA 75
Query: 115 SIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQLDALRDALKVMDRIR 174
IEAARAG GRGF+V+A+++R++A + + + +++ ++ + LK +
Sbjct: 76 GIEAARAGAFGRGFSVIAEDVRQLAQNSEEFLGNVAQITKELLQSINEVSAELK---KNA 132
Query: 175 EGTEILGRDIQIIVDISNVLNDISKEQEQFINDI--------KRLKGIALALEKFSELQD 226
+ + L D ++VD +N + +++ + + ++ + +++ E+ +
Sbjct: 133 QSVQALNDDTALLVDDANEVKLCNEDARALVTQCTEKIKISQENIQNLLSRMQENVEVSE 192
Query: 227 RYNKELASLLRLLASE 242
+ N+E++ +L +A E
Sbjct: 193 K-NEEISKILLQVADE 207
>emb|CAB46683.1| (AJ243600) MCPG protein [Rhodobacter sphaeroides]
Length = 534
Score = 69.5 bits (167), Expect = 4e-11
Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 100 IASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEFNSKVMDQ 159
+ +A+QT+L+ALNA++EAARAGE GRGFAVVA E+RR+A ++ A EI + +S
Sbjct: 353 VQEIARQTDLLALNAAVEAARAGEHGRGFAVVATEVRRLAERSQAAAAEISDLSS----- 407
Query: 160 LDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLKGIALA-L 218
R A+ I + R ++ DIS+ +++ Q + +L +
Sbjct: 408 -TTARSAVAAGGMIDNLVPDIARTADLVSDISSASQELAAGASQVSQALHQLDTVTQQNT 466
Query: 219 EKFSELQDRYN--KELASLLRLLASEYSRSGG 248
SEL R E + LR S Y R+GG
Sbjct: 467 AAASELSGRAADLSERSEDLRAAVS-YFRTGG 497
>gi|10954717 hypothetical chemoreceptor gene~similar to orf2 gene in pTi15955
[Agrobacterium rhizogenes] >gi|8918717|dbj|BAA97782.1|
(AB039932) hypothetical chemoreceptor gene~similar to
orf2 gene in pTi15955 [Agrobacterium rhizogenes]
>gi|10567381|dbj|BAB16190.1| (AP002086) hypothetical
chemoreceptor gene~similar to orf2 gene in pTi15955
[Agrobacterium rhizogenes]
Length = 758
Score = 69.5 bits (167), Expect = 4e-11
Identities = 47/150 (31%), Positives = 81/150 (53%), Gaps = 6/150 (4%)
Query: 93 ISKISDSIASVAKQTNLVALNASIEAARAGEAGRGFAVVADEIRRMAVQTMNLAKEIKEF 152
I +I+ I +A QTNL+ALNA +EAARAG+AG+GFAVVA E+R +A ++ AKEIK
Sbjct: 589 IEQITGVIDEIAFQTNLLALNAGVEAARAGDAGKGFAVVAQEVRELAQRSAKAAKEIKVL 648
Query: 153 NSKVMDQLDALRDALKVMDRIREGTEILGRDIQIIVDISNVLNDISKEQEQFINDIKRLK 212
+K +++ ++E +L + IV IS+ + I++ ++ +
Sbjct: 649 INKSTAEVNT------GSHLVQETGAVLAKISTQIVTISHHVETIARGSHDQSCALQGVN 702
Query: 213 GIALALEKFSELQDRYNKELASLLRLLASE 242
+++ ++ +E + R LAS+
Sbjct: 703 STVNQMDQMTQHNAAMVEETTAASRELASQ 732
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.315 0.132 0.333
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72632207
Number of Sequences: 2977
Number of extensions: 2583984
Number of successful extensions: 15012
Number of sequences better than 1.0e-10: 256
Number of HSP's better than 0.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 14630
Number of HSP's gapped (non-prelim): 369
length of query: 258
length of database: 189,106,746
effective HSP length: 66
effective length of query: 192
effective length of database: 149,606,604
effective search space: 28724467968
effective search space used: 28724467968
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 164 (68.3 bits)