BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1192 1732112 1731717 -132 !not a gene!
         (132 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||D71212 hypothetical protein PH1964 - Pyrococcus horikoshii ...   120  1e-26

>pir||D71212 hypothetical protein PH1964 - Pyrococcus horikoshii
           >gi|3258408|dbj|BAA31091.1| (AP000007) 109aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 109
           
 Score =  120 bits (297), Expect = 1e-26
 Identities = 61/106 (57%), Positives = 71/106 (66%)

Query: 6   MKSSFSSNLKALTFLATSHVSLIITXXXXXXXXGFSYYLIIFHNYLTPQNRHYNLSPNLP 65
           MKSSFSSNL AL FLATS VSL +T        G SYYLIIFH+Y +PQ+RHYN S  LP
Sbjct: 1   MKSSFSSNLNALMFLATSQVSLSVTLLNNSLPPGLSYYLIIFHDYFSPQDRHYNFSFYLP 60

Query: 66  SLIGCPSCLRVKLFGLYRPLFFHVHYCKISILAFSPSLVLNPKNSS 111
             I CP C RVK+F  Y P  FH++  ++ IL F PSLVL  + SS
Sbjct: 61  PFIRCPVCFRVKVFCFYSPFLFHIYNYQVGILPFFPSLVLYFEYSS 106


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.328    0.142    0.458 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51552059
Number of Sequences: 2977
Number of extensions: 1939852
Number of successful extensions: 4274
Number of sequences better than 1.0e-10: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4273
Number of HSP's gapped (non-prelim): 1
length of query: 132
length of database: 189,106,746
effective HSP length: 46
effective length of query: 86
effective length of database: 161,576,344
effective search space: 13895565584
effective search space used: 13895565584
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.7 bits)
S2: 161 (67.1 bits)