BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1205 (PAB1205) DE:Methyltransferase related protein
(208 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75025 methyltransferase related protein PAB1205 - Pyrococc... 418 e-116
pir||D71210 hypothetical protein PH1948 - Pyrococcus horikoshii ... 326 2e-88
gi|11497821 conserved hypothetical protein [Archaeoglobus fulgid... 152 4e-36
sp|Q57732|Y284_METJA HYPOTHETICAL PROTEIN MJ0284 >gi|2128214|pir... 145 4e-34
pir||B69123 conserved hypothetical protein MTH1918 - Methanobact... 137 9e-32
gb|AAF86874.1|AF201938_1 (AF201938) DC3 [Homo sapiens] 123 1e-27
dbj|BAA91622.1| (AK001321) unnamed protein product [Homo sapiens] 120 1e-26
emb|CAC12441.1| (AL445067) conserved hypothetical protein [Therm... 115 3e-25
gi|11429839 HSPC133 protein [Homo sapiens] 91 8e-18
gb|AAF49178.1| (AE003517) CG9666 gene product [Drosophila melano... 86 4e-16
gi|7661792 HSPC133 protein [Homo sapiens] >gi|6841488|gb|AAF2909... 83 2e-15
gb|AAK42334.1| Hypothetical protein [Sulfolobus solfataricus] 79 3e-14
pir||S74065 hypothetical protein c0134 - Sulfolobus solfataricus... 79 3e-14
pir||T19827 hypothetical protein C38D4.9 - Caenorhabditis elegan... 73 2e-12
pir||D72739 hypothetical protein APE0446 - Aeropyrum pernix (str... 70 2e-11
gb|AAG19303.1| (AE005026) Vng0857c [Halobacterium sp. NRC-1] 70 2e-11
>pir||F75025 methyltransferase related protein PAB1205 - Pyrococcus abyssi
(strain Orsay) >gi|5459158|emb|CAB50644.1| (AJ248288)
Methyltransferase related protein [Pyrococcus abyssi]
Length = 208
Score = 418 bits (1064), Expect = e-116
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MKKKELEIELSKLTGFKNPKHWLEQYRTPGRVASELLWMAYTLGDIEGKVIADLGAGTGV 60
MKKKELEIELSKLTGFKNPKHWLEQYRTPGRVASELLWMAYTLGDIEGKVIADLGAGTGV
Sbjct: 1 MKKKELEIELSKLTGFKNPKHWLEQYRTPGRVASELLWMAYTLGDIEGKVIADLGAGTGV 60
Query: 61 LSYGALSLGAKKVYAVEVDEDAVEILKTNLKKFEGKFEVFIGDVSSFKVRVDTVIMNPPF 120
LSYGALSLGAKKVYAVEVDEDAVEILKTNLKKFEGKFEVFIGDVSSFKVRVDTVIMNPPF
Sbjct: 61 LSYGALSLGAKKVYAVEVDEDAVEILKTNLKKFEGKFEVFIGDVSSFKVRVDTVIMNPPF 120
Query: 121 GSQRKHADRPFLLKAFEISDVVYSIHLAKPEVRSFIEKFSQDNGFLITHRLTTNLEIPAQ 180
GSQRKHADRPFLLKAFEISDVVYSIHLAKPEVRSFIEKFSQDNGFLITHRLTTNLEIPAQ
Sbjct: 121 GSQRKHADRPFLLKAFEISDVVYSIHLAKPEVRSFIEKFSQDNGFLITHRLTTNLEIPAQ 180
Query: 181 FFFHRKRIERISVDIYRFLRLGGEYGSL 208
FFFHRKRIERISVDIYRFLRLGGEYGSL
Sbjct: 181 FFFHRKRIERISVDIYRFLRLGGEYGSL 208
>pir||D71210 hypothetical protein PH1948 - Pyrococcus horikoshii
>gi|3258392|dbj|BAA31075.1| (AP000007) 207aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 207
Score = 326 bits (826), Expect = 2e-88
Identities = 157/200 (78%), Positives = 179/200 (89%)
Query: 2 KKKELEIELSKLTGFKNPKHWLEQYRTPGRVASELLWMAYTLGDIEGKVIADLGAGTGVL 61
+KKEL I LSKL GFKNPK WLEQYRTPG ASELLW+AY+LGDIEGKV+ADLGAGTGVL
Sbjct: 4 RKKELAIALSKLKGFKNPKVWLEQYRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVL 63
Query: 62 SYGALSLGAKKVYAVEVDEDAVEILKTNLKKFEGKFEVFIGDVSSFKVRVDTVIMNPPFG 121
SYGAL LGAK+V VEVD++AV++L NL +F+GKF+VFIGDVS F RVD VIMNPPFG
Sbjct: 64 SYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFG 123
Query: 122 SQRKHADRPFLLKAFEISDVVYSIHLAKPEVRSFIEKFSQDNGFLITHRLTTNLEIPAQF 181
SQRKHADRPFLLKAFEISDVVYSIHLAKPEVR FIEKFS ++GF++THRLTT +EIP QF
Sbjct: 124 SQRKHADRPFLLKAFEISDVVYSIHLAKPEVRRFIEKFSWEHGFVVTHRLTTKIEIPLQF 183
Query: 182 FFHRKRIERISVDIYRFLRL 201
FFHRK++ERI+VDIYRF ++
Sbjct: 184 FFHRKKLERITVDIYRFSKV 203
>gi|11497821 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7450910|pir||E69275 conserved hypothetical protein
AF0205 - Archaeoglobus fulgidus
>gi|2650438|gb|AAB91027.1| (AE001092) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 204
Score = 152 bits (379), Expect = 4e-36
Identities = 84/198 (42%), Positives = 126/198 (63%), Gaps = 6/198 (3%)
Query: 1 MKKKELEIELSKLTGFKNPKHWLEQYRTPGRVASELLWMAYTLGDIEGKVIADLGAGTGV 60
MKKK+LEI L K+ GF+NPK LEQY TP +A+ + A GD++ +I DLG GTG+
Sbjct: 1 MKKKKLEIVLEKIKGFQNPKIELEQYVTPPSLAAFIATTAELNGDLD--LIIDLGCGTGI 58
Query: 61 LSYGALSLGAKKVYAVEVDEDAVEILKTNLKKFEGKFEVFIGDVSSFKV-RVDTVIMNPP 119
L+ LG V V++D +A++I + N + + + +VS F+ R T +MNPP
Sbjct: 59 LAIACSLLGHYSV-GVDLDVEALKIARDNAAELGVEADFVRSEVSKFRCKRKVTTVMNPP 117
Query: 120 FGSQRKHADRPFLLKAFEISDVVYSIHLAKPEVRSFIEKFSQDNGFLITHRLTTNLEIPA 179
FG QRKHADRPFLLKAFEIS V+Y++H A +F+ K S+++GF +T++ ++ +
Sbjct: 118 FGIQRKHADRPFLLKAFEISKVIYTVHSAGSS--NFVRKLSEEHGFKVTYQWNFSIPLKR 175
Query: 180 QFFFHRKRIERISVDIYR 197
+ FH K + I V+++R
Sbjct: 176 TYSFHEKAFKYIPVEVFR 193
>sp|Q57732|Y284_METJA HYPOTHETICAL PROTEIN MJ0284 >gi|2128214|pir||E64335 conserved
hypothetical protein MJ0284 - Methanococcus jannaschii
>gi|1499066|gb|AAB98272.1| (U67483) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 219
Score = 145 bits (362), Expect = 4e-34
Identities = 84/216 (38%), Positives = 121/216 (55%), Gaps = 16/216 (7%)
Query: 1 MKKKELEIELSKLTGFKNPKHWLEQYRTPGRVASELLWMAYTLGDIEGKVIADLGAGTGV 60
+KKK LE+ L L NPK LEQY G++A+++L+ A + D V+ DLG GTG
Sbjct: 2 IKKKHLEMMLDSLKRHPNPKADLEQYTIDGKLAADILFFA--VNDFYNNVVIDLGCGTGR 59
Query: 61 LSYGALSLGAKKVYAVEVDEDAVEILKTNLKKFEGKFEVFIGDV----SSFKVRV----- 111
L+ G+ LGAK+ +++D +++E K N KK + + D+ F V
Sbjct: 60 LAIGSKILGAKRAIGIDIDRESIEAAKENAKKLNVDVDFYCMDIRDVDDEFLNNVLGEDR 119
Query: 112 ---DTVIMNPPFGSQRKHADRPFLLKAFEISDVVYSIHLAKPEVRSFIEKFSQDNGFLIT 168
VI NPPFG+Q+KHADR FL KA EI D++Y+IH + F+ K+ +D G IT
Sbjct: 120 DLKRVVIQNPPFGAQKKHADRVFLDKALEIGDIIYTIH--NYPTKDFVIKYVEDKGGKIT 177
Query: 169 HRLTTNLEIPAQFFFHRKRIERISVDIYRFLRLGGE 204
H IPA + FH+K++ I V I+R +LG E
Sbjct: 178 HIYEAFFRIPAIYEFHKKKVVEIPVVIFRIEKLGFE 213
>pir||B69123 conserved hypothetical protein MTH1918 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2623052|gb|AAB86378.1| (AE000942) possible protein
methyltransferase [Methanobacterium thermoautotrophicum]
Length = 211
Score = 137 bits (342), Expect = 9e-32
Identities = 78/203 (38%), Positives = 111/203 (54%), Gaps = 9/203 (4%)
Query: 2 KKKELEIELSKLTGFKNPKHWLEQYRTPGRVASELLWMAYTLGDIEGKVIADLGAGTGVL 61
+K+ LE+ L K+ +P LEQY TP +A+E+LW A +GDIEGK +ADLG GTG+L
Sbjct: 8 RKRHLEMLLEKVPAHPDPDPGLEQYLTPPGIAAEVLWAARAMGDIEGKTVADLGCGTGIL 67
Query: 62 SYGALSLGAKKVYAVEVDEDAVEILKTNLKKFE-GKFEVFIGDV---SSFKVRVDTVIMN 117
GA LGA+ VY +++D A+E ++ + G D+ + VDTV+ N
Sbjct: 68 GIGAALLGAEMVYCIDIDSGALEAGRSAAGELGLGNIRFIEADIRHHDALPGMVDTVVQN 127
Query: 118 PPFGSQ---RKHADRPFLLKAFEISDVVYSIHLAKPEVRSFIEKFSQDNGFLITHRLTTN 174
PPFGSQ + ADR F+ A + VYS H+A E F+ + + G +THR
Sbjct: 128 PPFGSQERAERGADRVFMDAAAATARTVYSFHMAGSE--DFVRNYYRKLGGTVTHRFRVE 185
Query: 175 LEIPAQFFFHRKRIERISVDIYR 197
IP + FHR + + V I R
Sbjct: 186 FPIPRTYSFHRMEVASVGVVILR 208
>gb|AAF86874.1|AF201938_1 (AF201938) DC3 [Homo sapiens]
Length = 209
Score = 123 bits (306), Expect = 1e-27
Identities = 81/206 (39%), Positives = 115/206 (55%), Gaps = 10/206 (4%)
Query: 1 MKKKELEIELSKLTGFKNPKHWLEQYRTPGRVASELLWMAY-TLGDIEGKVIADLGAGTG 59
++ KELE L ++ GF+ PK LEQY T +A+ +L+ + T DIE KV+ADLG G G
Sbjct: 4 VRLKELESRLQQVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKVVADLGCGCG 63
Query: 60 VLSYGALSLGAKKVYAVEVDEDAVEILKTNLKKFE-GKFEVFIGDVSSFKVRV----DTV 114
VLS G LGA ++DEDA+EI N ++FE ++ DV R+ DTV
Sbjct: 64 VLSIGTAMLGAGLCVGFDIDEDALEIFNRNAEEFELTNIDMVQCDVCLLSNRMSKSFDTV 123
Query: 115 IMNPPFGSQ-RKHADRPFLLKAFEIS-DVVYSIHLAKPEVRSFIEKFSQDNGFLITHRLT 172
IMNPPFG++ K D FL A E++ VYS+H K R ++K + + I
Sbjct: 124 IMNPPFGTKNNKGTDMAFLKTALEMARTAVYSLH--KSSTREHVQKKAAEWKIKIDIIAE 181
Query: 173 TNLEIPAQFFFHRKRIERISVDIYRF 198
++PA + FH+K+ I VD+ RF
Sbjct: 182 LRYDLPASYKFHKKKSVDIEVDLIRF 207
>dbj|BAA91622.1| (AK001321) unnamed protein product [Homo sapiens]
Length = 209
Score = 120 bits (299), Expect = 1e-26
Identities = 80/206 (38%), Positives = 114/206 (54%), Gaps = 10/206 (4%)
Query: 1 MKKKELEIELSKLTGFKNPKHWLEQYRTPGRVASELLWMAY-TLGDIEGKVIADLGAGTG 59
++ KELE L ++ GF+ PK L QY T +A+ +L+ + T DIE KV+ADLG G G
Sbjct: 4 VRLKELESRLQQVDGFEKPKLLLGQYPTRPHIAACMLYTIHNTYDDIENKVVADLGCGCG 63
Query: 60 VLSYGALSLGAKKVYAVEVDEDAVEILKTNLKKFE-GKFEVFIGDVSSFKVRV----DTV 114
VLS G LGA ++DEDA+EI N ++FE ++ DV R+ DTV
Sbjct: 64 VLSIGTAMLGAGLCVGFDIDEDALEIFNRNAEEFELTNIDMVQCDVCLLSNRMSKSFDTV 123
Query: 115 IMNPPFGSQ-RKHADRPFLLKAFEIS-DVVYSIHLAKPEVRSFIEKFSQDNGFLITHRLT 172
IMNPPFG++ K D FL A E++ VYS+H K R ++K + + I
Sbjct: 124 IMNPPFGTKNNKGTDMAFLKTALEMARTAVYSLH--KSSTREHVQKKAAEWKIKIDIIAE 181
Query: 173 TNLEIPAQFFFHRKRIERISVDIYRF 198
++PA + FH+K+ I VD+ RF
Sbjct: 182 LRYDLPASYKFHKKKSVDIEVDLIRF 207
>emb|CAC12441.1| (AL445067) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 197
Score = 115 bits (286), Expect = 3e-25
Identities = 75/192 (39%), Positives = 101/192 (52%), Gaps = 10/192 (5%)
Query: 3 KKELEIELSKLTGFKNPKHWLEQYRTPGRVASELLWMAYTLGDIEGKVIADLGAGTGVLS 62
K +LEI L KL N K++LEQY T A+ L Y G+I G+ + D G G G+L+
Sbjct: 4 KNDLEIRLQKLQQQGNFKNYLEQYPTDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILA 63
Query: 63 YGALSLGAKKVYAVEVDEDAVEILKTNLKKFEGKFEVFIGDVSSFKVRVDTVIMNPPFGS 122
G+ LGA+ V A ++D DA+E K N G + DVS + DT IMNPPFGS
Sbjct: 64 CGSYLLGAESVTAFDIDPDAIETAKRNC----GGVNFMVADVSEISGKYDTWIMNPPFGS 119
Query: 123 QRKHADRPFLLKAFEISDVVYSIHLAKPEVRSFIEKFSQDNGFLITHRLTTNLEIPAQFF 182
KH+DR F+ KAFE S +YSI AK R F+ + G + + +P +
Sbjct: 120 VVKHSDRAFIDKAFETSMWIYSIGNAK--ARDFLRREFSARGDVFREE-KVYITVPRIYR 176
Query: 183 FH---RKRIERI 191
H R RIE +
Sbjct: 177 HHSYDRARIEAV 188
>gi|11429839 HSPC133 protein [Homo sapiens]
Length = 160
Score = 91.3 bits (223), Expect = 8e-18
Identities = 60/153 (39%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 42 TLGDIEGKVIADLGAGTGVLSYGALSLGAKKVYAVEVDEDAVEILKTNLKKFE-GKFEVF 100
T DIE KV+ADLG G GVLS G LGA ++DEDA+EI N ++FE ++
Sbjct: 8 TYDDIENKVVADLGCGCGVLSIGTAMLGAGLCVGFDIDEDALEIFNRNAEEFELTNIDMV 67
Query: 101 IGDVSSFKVRV----DTVIMNPPFGSQ-RKHADRPFLLKAFEIS-DVVYSIHLAKPEVRS 154
DV R+ DTVIMNPPFG++ K D FL A E++ VYS+H K R
Sbjct: 68 QCDVCLLSNRMSKSFDTVIMNPPFGTKNNKGTDMAFLKTALEMARTAVYSLH--KSSTRE 125
Query: 155 FIEKFSQDNGFLITHRLTTNLEIPAQFFFHRKR 187
++K + + I ++PA + FH+K+
Sbjct: 126 HVQKKAAEWKIKIDIIAELRYDLPASYKFHKKK 158
>gb|AAF49178.1| (AE003517) CG9666 gene product [Drosophila melanogaster]
Length = 261
Score = 85.8 bits (209), Expect = 4e-16
Identities = 58/155 (37%), Positives = 86/155 (55%), Gaps = 9/155 (5%)
Query: 1 MKKKELEIELSKLTGFKNPKHWLEQYRTPGRVASELLW-MAYTLGDIEGKVIADLGAGTG 59
+K ++LE L + GF+ PK LEQY TP +A+ + M DIEGK++ DLG G G
Sbjct: 102 LKLRKLEEYLQGVDGFEQPKILLEQYPTPPHIAACMAHHMQSQHEDIEGKLVGDLGCGCG 161
Query: 60 VLSYGALSLGAKKVYAVEVDEDAVEILKTNLKKFE-GKFEVFIGDV-----SSFKVRVDT 113
+LS + LGA+ E+D DAV+ + N+ + E + DV S ++ DT
Sbjct: 162 MLSIASTLLGAQLTVGFELDGDAVDTFRGNVVEMELPNVDCVRADVLQLIGSKWEKSFDT 221
Query: 114 VIMNPPFGSQRKHA-DRPFLLKAFEISD-VVYSIH 146
V+MNPPFG++ D FL A +++ VYS+H
Sbjct: 222 VLMNPPFGTKHNAGMDMRFLEVALRLANRAVYSLH 256
>gi|7661792 HSPC133 protein [Homo sapiens]
>gi|6841488|gb|AAF29097.1|AF161482_1 (AF161482) HSPC133
[Homo sapiens]
Length = 132
Score = 83.1 bits (202), Expect = 2e-15
Identities = 44/95 (46%), Positives = 61/95 (63%), Gaps = 1/95 (1%)
Query: 1 MKKKELEIELSKLTGFKNPKHWLEQYRTPGRVASELLWMAY-TLGDIEGKVIADLGAGTG 59
++ KELE L ++ GF+ PK LEQY T +A+ +L+ + T DIE KV+ADLG G G
Sbjct: 4 VRLKELESRLQQVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKVVADLGCGCG 63
Query: 60 VLSYGALSLGAKKVYAVEVDEDAVEILKTNLKKFE 94
VLS G LGA+ ++DEDA+EI N ++FE
Sbjct: 64 VLSIGTAMLGAELCVGFDIDEDALEIFNRNAEEFE 98
>gb|AAK42334.1| Hypothetical protein [Sulfolobus solfataricus]
Length = 127
Score = 79.2 bits (192), Expect = 3e-14
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 76 VEVDEDAVEILKTNLKKFEGKFEVFIGDVSSFKVRVDTVIMNPPFGSQRKHADRPFLLKA 135
+E+D ++++ +K + + E+ D + F + DTVI NPPFG + D FL A
Sbjct: 1 MEIDMESLDTVKNMKSELDLDIELINADATQFYSKFDTVIQNPPFGVVNRGIDIKFLQTA 60
Query: 136 FEISDVVYSIHLAKPEVRSFIEKFSQDNGFLITHRLTTNLEIPAQFFFHRKRIERISVDI 195
F ISDVVYSIH + R I ++D GF T L+ + + +H +R+ VDI
Sbjct: 61 FSISDVVYSIHKSNERSREIIITMAKDYGF-STEILSERFRLKPYYPWHMRRVHEFLVDI 119
Query: 196 YRFLRL 201
Y F ++
Sbjct: 120 YFFSKI 125
>pir||S74065 hypothetical protein c0134 - Sulfolobus solfataricus
>gi|1707764|emb|CAA69436.1| (Y08256) orf c01034
[Sulfolobus solfataricus]
Length = 127
Score = 79.2 bits (192), Expect = 3e-14
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 76 VEVDEDAVEILKTNLKKFEGKFEVFIGDVSSFKVRVDTVIMNPPFGSQRKHADRPFLLKA 135
+E+D ++++ +K + + E+ D + F + DTVI NPPFG + D FL A
Sbjct: 1 MEIDMESLDTVKNMKSELDLDIELINADATQFYSKFDTVIQNPPFGVVNRGIDIKFLQTA 60
Query: 136 FEISDVVYSIHLAKPEVRSFIEKFSQDNGFLITHRLTTNLEIPAQFFFHRKRIERISVDI 195
F ISDVVYSIH + R I ++D GF T L+ + + +H +R+ VDI
Sbjct: 61 FSISDVVYSIHKSNERSREIIITMAKDYGF-STEILSERFRLKPYYPWHMRRVHEFLVDI 119
Query: 196 YRFLRL 201
Y F ++
Sbjct: 120 YFFSKI 125
>pir||T19827 hypothetical protein C38D4.9 - Caenorhabditis elegans
>gi|3874828|emb|CAA86320.1| (Z46241) similarity to
methylases. It is not clear whether this predicted
protein would methylate DNA or protein [Caenorhabditis
elegans]
Length = 214
Score = 73.4 bits (177), Expect = 2e-12
Identities = 57/205 (27%), Positives = 104/205 (49%), Gaps = 15/205 (7%)
Query: 10 LSKLTGFKNPKHWLEQYRTPGRVASELLWMAYTLGDIEGKVIADLGAGTGVLSYGALSL- 68
L++L GF+ PK LEQY T +A ++ M EGK + D+G G G+L A ++
Sbjct: 10 LNELEGFEKPKIKLEQYATSSELAVSMMEMIDETIGFEGKKLIDIGCGCGMLMTTAATMY 69
Query: 69 GAKKVYAVEVDEDAVEILKTNLK--KFEGKFEVFIGDVSSFKVRV-----DTVIMNPPFG 121
+ V V++D++A++I NL+ + + + E+ D+ + + D ++NPPFG
Sbjct: 70 ELETVLGVDIDDEALKICSRNLETAEVQDRCELLQADILDPESDLPRGTFDVAVINPPFG 129
Query: 122 SQRKHA-DRPFL---LKAFEISDVVYSIHLAKPEVRSFIEKFSQD-NGFLITHRLTTNLE 176
++ D F+ L+ V+S+H K R +I K ++ +G +
Sbjct: 130 TKNNAGIDMQFVQIGLQMVRPGGSVFSLH--KSSTRDYILKNAKKWDGVGAECCAEMRWQ 187
Query: 177 IPAQFFFHRKRIERISVDIYRFLRL 201
+PA + FH+++ I+VD+ F +L
Sbjct: 188 LPATYKFHKQKAVDIAVDLIHFKKL 212
>pir||D72739 hypothetical protein APE0446 - Aeropyrum pernix (strain K1)
>gi|5104092|dbj|BAA79408.1| (AP000059) 219aa long
hypothetical protein [Aeropyrum pernix]
Length = 219
Score = 70.2 bits (169), Expect = 2e-11
Identities = 64/195 (32%), Positives = 84/195 (42%), Gaps = 14/195 (7%)
Query: 18 NPKHWLEQYRTPGRVASELLWMAYTLGDIEGKVIADLGAGTGVLSYGALSLGAKKVYAVE 77
+P+ LEQY TP +A + A G +EG + ADL AGT L L GA +V AVE
Sbjct: 29 SPRRELEQYTTPADIAVRIAVDALLRGLLEGALAADLAAGTCRLGLALLLYGASRVAAVE 88
Query: 78 VDEDAVEILKTNLKKFEGKFEVFIGDVSSFKVR---------VDTVIMNPPFGSQRKHAD 128
D + +K +F V+S R VD V NPPFG R+ AD
Sbjct: 89 ADGRLAGLCLGAAEKLGLGGRIFF--VASRVSRRRGPLAAGSVDLVATNPPFGVWRRGAD 146
Query: 129 RPFLLKAFEISD-VVYSIHLAKPEVRSFIEKFSQDNGFLITHRLTTNLEIPAQFFFHRKR 187
L A + VY+I K F + G+ + IPA HR R
Sbjct: 147 WEVLEYALRLKPRAVYAI--VKSGNMGFHAAKAAGLGYSTLLISREHFPIPASMPGHRSR 204
Query: 188 IERISVDIYRFLRLG 202
+ R+SVD+ F R G
Sbjct: 205 VRRVSVDVVLFTRGG 219
>gb|AAG19303.1| (AE005026) Vng0857c [Halobacterium sp. NRC-1]
Length = 89
Score = 69.9 bits (168), Expect = 2e-11
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 116 MNPPFGSQ--RKHADRPFLLKAFEISDVVYSIHLAKPEVRSFIEKFSQDNGFLITHRLTT 173
MNPPFG+Q +HADR FL A E++ V YS+H A ++F+E F+ D G +TH
Sbjct: 1 MNPPFGAQDGAEHADRAFLAAASEVAAVSYSVHNAGS--KAFVESFAGDRGGTVTHAFAA 58
Query: 174 NLEIPAQFFFHRKRIERISVDIYR 197
+PAQF FH + + V+++R
Sbjct: 59 EFAVPAQFSFHTQDRAVLDVELFR 82
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.141 0.405
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77995587
Number of Sequences: 2977
Number of extensions: 3095043
Number of successful extensions: 7825
Number of sequences better than 1.0e-10: 16
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 7794
Number of HSP's gapped (non-prelim): 16
length of query: 208
length of database: 189,106,746
effective HSP length: 54
effective length of query: 154
effective length of database: 156,788,448
effective search space: 24145420992
effective search space used: 24145420992
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 163 (67.9 bits)