BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1207 (serB) DE:phosphoserine phosphatase (serB)
(210 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75025 phosphoserine phosphatase (serb) PAB1207 - Pyrococcu... 429 e-119
pir||H71201 probable phosphoserine phosphatase - Pyrococcus hori... 311 5e-84
sp|Q58989|SERB_METJA PUTATIVE PHOSPHOSERINE PHOSPHATASE (PSP) (O... 116 3e-25
pir||C83025 probable phosphoserine phosphatase PA4960 [imported]... 94 2e-18
gi|11499721 phosphoserine phosphatase (serB) [Archaeoglobus fulg... 91 8e-18
pir||C69084 phosphoserine phosphatase - Methanobacterium thermoa... 87 2e-16
gb|AAG20510.1| (AE005123) phosphoserine phosphatase; SerB [Halob... 80 2e-14
pir||T40408 phosphoserine phosphatase - fission yeast (Schizosa... 78 8e-14
pir||C72657 probable phosphoserine phosphatase APE0683 - Aeropyr... 78 1e-13
emb|CAC12065.1| (AL445066) conserved hypothetical protein [Therm... 77 1e-13
pir||C71914 phosphoserine phosphatase - Helicobacter pylori (str... 77 2e-13
pir||T43186 probable phosphoserine phosphatase (EC 3.1.3.3) - fi... 76 4e-13
pir||D64601 phosphoserine phosphatase (EC 3.1.3.3) - Helicobacte... 75 5e-13
pir||G81134 phosphoserine phosphatase NMB0981 [imported] - Neiss... 73 2e-12
sp|P06862|SERB_ECOLI PHOSPHOSERINE PHOSPHATASE (PSP) (O-PHOSPHOS... 73 3e-12
pir||E81885 probable phosphoserine phosphatase (EC 3.1.3.3) NMA1... 72 5e-12
pir||E70860 probable serB2 protein - Mycobacterium tuberculosis ... 72 6e-12
pir||A82087 phosphoserine phosphatase VC2345 [imported] - Vibrio... 69 4e-11
>pir||D75025 phosphoserine phosphatase (serb) PAB1207 - Pyrococcus abyssi
(strain Orsay) >gi|5459156|emb|CAB50642.1| (AJ248288)
phosphoserine phosphatase (serB) [Pyrococcus abyssi]
Length = 210
Score = 429 bits (1091), Expect = e-119
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MEGMKKLMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLW 60
MEGMKKLMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLW
Sbjct: 1 MEGMKKLMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLW 60
Query: 61 VGRRKEEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYA 120
VGRRKEEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYA
Sbjct: 61 VGRRKEEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYA 120
Query: 121 NELVFKDGKVTGDVIVRVTFDNKGEILNELKRALRPKVTVAVGDWKNDVPMFKVADVSIS 180
NELVFKDGKVTGDVIVRVTFDNKGEILNELKRALRPKVTVAVGDWKNDVPMFKVADVSIS
Sbjct: 121 NELVFKDGKVTGDVIVRVTFDNKGEILNELKRALRPKVTVAVGDWKNDVPMFKVADVSIS 180
Query: 181 LGHDHADYNARDLYEVKRILEELFQGTEKL 210
LGHDHADYNARDLYEVKRILEELFQGTEKL
Sbjct: 181 LGHDHADYNARDLYEVKRILEELFQGTEKL 210
>pir||H71201 probable phosphoserine phosphatase - Pyrococcus horikoshii
>gi|3258324|dbj|BAA31007.1| (AP000007) 210aa long
hypothetical phosphoserine phosphatase [Pyrococcus
horikoshii]
Length = 210
Score = 311 bits (788), Expect = 5e-84
Identities = 152/205 (74%), Positives = 176/205 (85%), Gaps = 1/205 (0%)
Query: 7 LMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGRRKE 66
L+AFDLEGTLTDM+SWE+LH+KF TC AKK+AELFFSG+ISYEEWA+LDASLW GRR+E
Sbjct: 6 LIAFDLEGTLTDMVSWELLHKKFETCGLAKKNAELFFSGRISYEEWAKLDASLWKGRRRE 65
Query: 67 EVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYANELVFK 126
EVEE FK+V LK A+EL WLK GFK AII+GGLMCLAKK+A LN D+VYANELVF
Sbjct: 66 EVEEVFKEVSLKDYAEELFRWLKEKGFKTAIITGGLMCLAKKVAEKLNPDYVYANELVFN 125
Query: 127 D-GKVTGDVIVRVTFDNKGEILNELKRALRPKVTVAVGDWKNDVPMFKVADVSISLGHDH 185
+ G++TGDVIVRVTFDNKGEIL LKR L P +TVAVGDWKND+PMF+VAD+SISLG DH
Sbjct: 126 EKGEITGDVIVRVTFDNKGEILERLKRELNPTLTVAVGDWKNDLPMFEVADISISLGEDH 185
Query: 186 ADYNARDLYEVKRILEELFQGTEKL 210
ADY A+DL EVK+IL+E+ TEKL
Sbjct: 186 ADYLAKDLREVKKILKEVLLETEKL 210
>sp|Q58989|SERB_METJA PUTATIVE PHOSPHOSERINE PHOSPHATASE (PSP) (O-PHOSPHOSERINE
PHOSPHOHYDROLASE) (PSPASE) >gi|2129202|pir||A64499
phosphoserine phosphatase (EC 3.1.3.3) - Methanococcus
jannaschii >gi|1592204|gb|AAB99612.1| (U67599)
phosphoserine phosphatase (serB) [Methanococcus
jannaschii]
Length = 211
Score = 116 bits (287), Expect = 3e-25
Identities = 74/208 (35%), Positives = 112/208 (53%), Gaps = 3/208 (1%)
Query: 1 MEGMKKLMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLW 60
ME KKL+ FD + TL + + + + R+ G E+ KK + GK+++E+ R SL
Sbjct: 1 MEKKKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLL 60
Query: 61 VGRRKEEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYA 120
E+VE+ K + GA+E LK G+ +A++SGG KI L +D+ +A
Sbjct: 61 KDLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA 120
Query: 121 NELVFKDGKVTGDVIVRVTFDN-KGEILNELKR--ALRPKVTVAVGDWKNDVPMFKVADV 177
N L+ KDGK+TGDV V +N KGEIL ++ + + + TVAVGD ND+ MFK A +
Sbjct: 121 NRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGL 180
Query: 178 SISLGHDHADYNARDLYEVKRILEELFQ 205
I+ D+ KR L E+ +
Sbjct: 181 KIAFCAKPILKEKADICIEKRDLREILK 208
>pir||C83025 probable phosphoserine phosphatase PA4960 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9951242|gb|AAG08345.1|AE004909_1 (AE004909) probable
phosphoserine phosphatase [Pseudomonas aeruginosa]
Length = 429
Score = 93.6 bits (229), Expect = 2e-18
Identities = 59/179 (32%), Positives = 96/179 (52%), Gaps = 3/179 (1%)
Query: 5 KKLMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGRR 64
++L FD++ TL + + L + G EK E G++ + + +L G
Sbjct: 215 RRLAVFDMDSTLIEAEVIDELAKAAGVGEKVAAITERAMRGELDFRASFKERLALLQGLS 274
Query: 65 KEEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYANELV 124
++ +EE ++L GA+ L + LK G+K AI+SGG A+++ L +D+V+ANEL
Sbjct: 275 EDVLEEIGASLRLTEGAETLFAELKRLGYKTAILSGGFTYFARQLQAKLGIDYVFANELQ 334
Query: 125 FKDGKVTGDVIVR-VTFDNKGEILNEL--KRALRPKVTVAVGDWKNDVPMFKVADVSIS 180
DGKVTG + V K ++L EL K L + T+AVGD ND+PM +A + ++
Sbjct: 335 IVDGKVTGVAVEPIVDAQRKADLLRELAAKEGLSLEQTIAVGDGANDLPMLGLAGLGVA 393
>gi|11499721 phosphoserine phosphatase (serB) [Archaeoglobus fulgidus]
>gi|6226137|sp|O28142|SERB_ARCFU PUTATIVE PHOSPHOSERINE
PHOSPHATASE (PSP) (O-PHOSPHOSERINE PHOSPHOHYDROLASE)
(PSPASE) >gi|7483917|pir||B69517 phosphoserine
phosphatase (serB) homolog - Archaeoglobus fulgidus
>gi|2648387|gb|AAB89113.1| (AE000956) phosphoserine
phosphatase (serB) [Archaeoglobus fulgidus]
Length = 344
Score = 91.3 bits (223), Expect = 8e-18
Identities = 55/179 (30%), Positives = 94/179 (51%), Gaps = 3/179 (1%)
Query: 5 KKLMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGRR 64
K+L+ FD++ TL + + L ++ G ++ K E G+I ++E L G
Sbjct: 129 KRLIVFDMDSTLVEAEIIDELAKEAGVGDEVSKLTERAMRGEIGFKEALEERVRLLKGLP 188
Query: 65 KEEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYANELV 124
E +E + +KL GA+EL LK G+K+A++SGG ++ L +D+ + NEL
Sbjct: 189 VEVLERIYSRIKLTEGAKELVRSLKEAGYKVAVVSGGFSYFTDRLKEELGLDYAFGNELE 248
Query: 125 FKDGKVTGDVIVR-VTFDNKGEILNEL--KRALRPKVTVAVGDWKNDVPMFKVADVSIS 180
++G++TG + R + K I+ E+ K + P+ VAVGD ND M + A + I+
Sbjct: 249 IENGRLTGRIKGRIIDASEKARIVEEIARKEGISPENVVAVGDGANDRLMIERAGLGIA 307
>pir||C69084 phosphoserine phosphatase - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622752|gb|AAB86099.1| (AE000921)
phosphoserine phosphatase [Methanobacterium
thermoautotrophicum]
Length = 495
Score = 87.0 bits (212), Expect = 2e-16
Identities = 56/214 (26%), Positives = 107/214 (49%), Gaps = 9/214 (4%)
Query: 6 KLMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGRRK 65
KL+ FDL+ + D + + + + G ++ + E G + +E R L G
Sbjct: 7 KLVVFDLDNVIIDGEAIDEIGKIAGVEKEVMEITEKAMQGDVDFESSIRERVKLLKGTAV 66
Query: 66 EEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYANELVF 125
E++++ ++ L GA+E LK G+ +A+ISG +A+ + L +D+++ N L
Sbjct: 67 EDIKKVADELPLMEGAEETVKTLKEKGYLVAVISGSFDLVAEPVKEKLGIDYLFCNRLHE 126
Query: 126 KDGKVTGDVIVRVTFDNKGEILNEL--KRALRPKVTVAVGDWKNDVPMFKVADVSISLG- 182
+DG +TG+V + +K ++L + K + P+ VAVGD ND+ M + A + I+
Sbjct: 127 EDGILTGEVSGPLVEKSKYDVLCGILEKEGISPRECVAVGDGANDISMIEAARLGIAFNA 186
Query: 183 ------HDHADYNARDLYEVKRILEELFQGTEKL 210
A +DL ++ I+E++ + +KL
Sbjct: 187 KPALRKKADAVVEDKDLRKILPIIEKVAEADDKL 220
>gb|AAG20510.1| (AE005123) phosphoserine phosphatase; SerB [Halobacterium sp.
NRC-1]
Length = 235
Score = 80.4 bits (195), Expect = 2e-14
Identities = 59/206 (28%), Positives = 97/206 (46%), Gaps = 11/206 (5%)
Query: 7 LMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGRRKE 66
L+AFD +GTL + + + + G ++ E G++SY + R A L G +
Sbjct: 27 LVAFDFDGTLAESEMLDRIAARAGVGDEVAAITERAMRGELSYADSLRERAQLVAGLPES 86
Query: 67 EVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGL---MCLAKKIANILNVDHVYANEL 123
+ V+L+ GA +L + L+ G ++ +++GG + A A + D V N L
Sbjct: 87 AAAAVYDGVRLRDGAGDLVAKLRDGGVRVVVLTGGFKPGVAAAFDAAGVA-ADGVVGNRL 145
Query: 124 VFKDGKVTGDVIVRVTFDNKGEILNELKRA--LRPKVTVAVGDWKNDVPMFKVADVSISL 181
V DG++TG V + K + L + A P VAVGD NDVPM A +I +
Sbjct: 146 VAADGELTGAVEGPLVEGTKDDALRDACEAAGTTPAAAVAVGDGANDVPMLDAAGTAIGV 205
Query: 182 ----GHD-HADYNARDLYEVKRILEE 202
G D H D+ + + R+L++
Sbjct: 206 DPKPGVDAHCDHTVSSMDALGRVLDD 231
>pir||T40408 phosphoserine phosphatase - fission yeast (Schizosaccharomyces
pombe) >gi|3417415|emb|CAA20303.1| (AL031261)
phosphoserine phosphatase [Schizosaccharomyces pombe]
Length = 298
Score = 78.0 bits (189), Expect = 8e-14
Identities = 55/184 (29%), Positives = 88/184 (46%), Gaps = 11/184 (5%)
Query: 5 KKLMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGRR 64
KKL+ FD++ TL + L + G ++ L +G+I ++E R SL G
Sbjct: 76 KKLVVFDMDSTLIQQECIDELAAEAGIQKEVATITSLAMNGEIDFQESLRRRVSLLQGLS 135
Query: 65 KEEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYANELV 124
+ + + + PGA++L LK G + + SGG + +A+ + L++D+ YAN L
Sbjct: 136 VDVINKVIGKITFTPGAKQLCHCLKQMGATLVVASGGFVPMAEYVKGQLDLDYAYANVLE 195
Query: 125 FKD------GKVTGDVIVRVTFDNKGEILNELKR--ALRPKVTVAVGDWKNDVPMFKVAD 176
F D GKV G + V K IL E + L T+AVGD ND+ M +
Sbjct: 196 FSDDGKFLTGKVQGAI---VDGQRKASILREKREELGLNKLETMAVGDGANDLVMMAESG 252
Query: 177 VSIS 180
+ I+
Sbjct: 253 LGIA 256
>pir||C72657 probable phosphoserine phosphatase APE0683 - Aeropyrum pernix
(strain K1) >gi|5104344|dbj|BAA79659.1| (AP000060) 222aa
long hypothetical phosphoserine phosphatase [Aeropyrum
pernix]
Length = 222
Score = 77.6 bits (188), Expect = 1e-13
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 12/185 (6%)
Query: 6 KLMAFDLEGTLTDM-ISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWV--- 61
KL+ FD++G L ++ SW +HR+ G E+A K E+F G I Y EW RLD LW+
Sbjct: 6 KLVIFDVDGVLVEVKSSWGYIHRRLGVEEEAMKVKEMFERGSIDYIEWMRLDTELWIRAS 65
Query: 62 -GR-RKEEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVY 119
GR + + E ++ ++ A E L+ G +I ++S G+ L +++A + D
Sbjct: 66 GGRLHRSRLMEIVGEIPVRKEAFEAVRMLRRMGLRIGLVSSGIDLLVRRVAAEIGADAWA 125
Query: 120 ANELVF-KDGKVTGDVIVRVTFDNKGEILN---ELKRALRPKVTVAVGDWKNDVPMFKVA 175
+N L+F K+G + V D +G + EL +L + VGD + D +
Sbjct: 126 SNRLLFDKNGFLQPGGSPLVGVDKRGAVTRMAYELGASL--EEVAYVGDSRWDASAMSIV 183
Query: 176 DVSIS 180
+ I+
Sbjct: 184 GLPIA 188
>emb|CAC12065.1| (AL445066) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 212
Score = 77.3 bits (187), Expect = 1e-13
Identities = 52/169 (30%), Positives = 88/169 (51%), Gaps = 10/169 (5%)
Query: 4 MKKLMAFDLEGTLTDM-ISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVG 62
M KL FD++GTLTD SWE +HR+ T + L+ +G ISYEE+ R D W+
Sbjct: 7 MIKLAIFDMDGTLTDEPSSWEYVHRRLHTDNHM--NFRLYRNGFISYEEFFRSDVLAWLR 64
Query: 63 R----RKEEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHV 118
+K+++ +D+KL+ G+ E+ + LK G A++SGG+ L + + +D+
Sbjct: 65 MHPRLKKDDIAGILRDIKLRDGSSEVVNGLKERGLITAVVSGGISWLCDILNEYMQIDYN 124
Query: 119 YANELVFKDGK-VTGDVIVRVTFDNKGEILNELKRALR--PKVTVAVGD 164
+N + +G V +RV + K + L+ L T+++GD
Sbjct: 125 LSNVIATDEGGFVQPWGYIRVIPERKNIAVKSLQSMLHISKDETISIGD 173
>pir||C71914 phosphoserine phosphatase - Helicobacter pylori (strain J99)
>gi|4155140|gb|AAD06170.1| (AE001491) PHOSPHOSERINE
PHOSPHATASE [Helicobacter pylori J99]
Length = 207
Score = 76.9 bits (186), Expect = 2e-13
Identities = 55/193 (28%), Positives = 95/193 (48%), Gaps = 10/193 (5%)
Query: 4 MKKLMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGR 63
M+KL FD + TL + + E L R +G ++ ++ +G+ + + L S
Sbjct: 1 MQKLAVFDFDSTLVNAETIESLARAWGVFDEVREITLKAMNGETDFHKSLILRVSKLKNM 60
Query: 64 RKEEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYANEL 123
+ +E + + L GA EL S LK +K+ SGG ++LN+D ++N L
Sbjct: 61 PLKLAKEVCESLPLFEGAFELISALKEKNYKVVCFSGGFDLATNHYRDLLNLDAAFSNTL 120
Query: 124 VFKDGKVTGDVIVRVTFD-NKGEILNELKRALR--PKVTVAVGDWKNDVPMFKVADVSIS 180
+ ++ + G V + F +KGE+L L+R L T+ VGD ND+ MFK A + I+
Sbjct: 121 IVENNALNGLVTGHMMFSYSKGEMLLALQRLLNISKDRTLVVGDGANDLSMFKHAHIKIA 180
Query: 181 LGHDHADYNARDL 193
+NA+++
Sbjct: 181 -------FNAKEI 186
>pir||T43186 probable phosphoserine phosphatase (EC 3.1.3.3) - fission yeast
(Schizosaccharomyces pombe) >gi|1749730|dbj|BAA13922.1|
(D89261) similar to Saccharomyces cerevisiae
phosphoserine phosphatase, SWISS-PROT Accession Number
P42941 [Schizosaccharomyces pombe]
Length = 285
Score = 75.7 bits (183), Expect = 4e-13
Identities = 55/184 (29%), Positives = 86/184 (45%), Gaps = 11/184 (5%)
Query: 5 KKLMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGRR 64
KKL+ FD++ TL + L + G ++ L +G+I E R SL G
Sbjct: 76 KKLVVFDMDSTLIQQECIDELAAEAGIQKEVATITSLAMNGEIDLHESLRRRVSLLQGLS 135
Query: 65 KEEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYANELV 124
+ + + + PGA++L LK G + + SGG + +A+ + L++D+ YAN L
Sbjct: 136 VDVINKVIGKITFTPGAKQLCHCLKQMGATLVVASGGFVPMAEYVKGQLDLDYAYANVLE 195
Query: 125 FKD------GKVTGDVIVRVTFDNKGEILNELKR--ALRPKVTVAVGDWKNDVPMFKVAD 176
F D GKV G + V K IL E + L T+AVGD ND+ M +
Sbjct: 196 FSDDGKFLTGKVQGAI---VDGQRKASILREKREELGLNKLETMAVGDGANDLVMMAESG 252
Query: 177 VSIS 180
+ I+
Sbjct: 253 LGIA 256
>pir||D64601 phosphoserine phosphatase (EC 3.1.3.3) - Helicobacter pylori
(strain 26695) >gi|2313770|gb|AAD07711.1| (AE000578)
phosphoserine phosphatase (serB) [Helicobacter pylori
26695]
Length = 207
Score = 75.3 bits (182), Expect = 5e-13
Identities = 59/207 (28%), Positives = 98/207 (46%), Gaps = 10/207 (4%)
Query: 4 MKKLMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGR 63
M+KL FD + TL + + E L R +G ++ K +G+ + + L S
Sbjct: 1 MQKLAVFDFDSTLVNAETIESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKLKNM 60
Query: 64 RKEEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYANEL 123
+ +E + + L GA EL S LK +K+ SGG ++L++D ++N L
Sbjct: 61 PLKLAKEVCESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTL 120
Query: 124 VFKDGKVTGDVIVRVTFD-NKGEILNELKRALR--PKVTVAVGDWKNDVPMFKVADVSIS 180
+ ++ + G V + F +KGE+L L+R L T+ VGD ND+ MFK A + I+
Sbjct: 121 IVENDALNGLVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIA 180
Query: 181 LG-----HDHADY--NARDLYEVKRIL 200
HA + N DL +K ++
Sbjct: 181 FNAKEVLKQHATHCINEPDLALIKPLI 207
>pir||G81134 phosphoserine phosphatase NMB0981 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7226221|gb|AAF41385.1| (AE002449) phosphoserine
phosphatase [Neisseria meningitidis MC58]
Length = 277
Score = 73.4 bits (177), Expect = 2e-12
Identities = 47/178 (26%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 7 LMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGRRKE 66
L+ D++ TL + + + G K + E G++ +E+ R +L G +
Sbjct: 72 LIVSDMDSTLITIECVDEIAAGVGLKNKVAEITERSMRGELDFEQSLRSRVALLAGLDER 131
Query: 67 EVEETFKDV-KLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYANELVF 125
+ + +++V KL PGA+ L K + K ++SGG +++ L ++ +AN L
Sbjct: 132 VLADVYENVLKLSPGAEFLLDECKRHDVKFLLVSGGFTFFTERLQQRLGFEYQHANVLEI 191
Query: 126 KDGKVTGDVIVR-VTFDNKGEILNELKR--ALRPKVTVAVGDWKNDVPMFKVADVSIS 180
++G++TG + R + K ++L E + L+P +AVGD ND+PM K A + ++
Sbjct: 192 ENGRLTGRLKGRIIDAQAKADLLREYRSRLGLQPHQVLAVGDGANDIPMLKEAGIGVA 249
>sp|P06862|SERB_ECOLI PHOSPHOSERINE PHOSPHATASE (PSP) (O-PHOSPHOSERINE PHOSPHOHYDROLASE)
(PSPASE) >gi|67239|pir||PAECS phosphoserine phosphatase
(EC 3.1.3.3) - Escherichia coli
>gi|42948|emb|CAA26852.1| (X03046) phosphoserine
phosphatase (EC 3.1.3.3) [Escherichia coli]
>gi|537228|gb|AAA97284.1| (U14003) phosphoserine
phosphatase [Escherichia coli]
>gi|1790849|gb|AAC77341.1| (AE000509) 3-phosphoserine
phosphatase [Escherichia coli K12]
Length = 322
Score = 73.0 bits (176), Expect = 3e-12
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 7 LMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGRRKE 66
L+ D++ T + + + + GT E + E G++ + R + G
Sbjct: 112 LLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADAN 171
Query: 67 EVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYANELVFK 126
+++ +++ L PG +L L+ G+K+AI SGG A+ + + L + V ANEL
Sbjct: 172 ILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKLRLTAVVANELEIM 231
Query: 127 DGKVTGDVIVR-VTFDNKGEILNELKRALRPKV--TVAVGDWKNDVPMFKVADVSIS 180
DGK TG+VI V K + L L + + TVA+GD ND+PM K A + I+
Sbjct: 232 DGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIA 288
>pir||E81885 probable phosphoserine phosphatase (EC 3.1.3.3) NMA1179 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379871|emb|CAB84441.1| (AL162755) putative
phosphoserine phosphatase [Neisseria meningitidis Z2491]
Length = 277
Score = 72.2 bits (174), Expect = 5e-12
Identities = 46/178 (25%), Positives = 91/178 (50%), Gaps = 4/178 (2%)
Query: 7 LMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGRRKE 66
L+ D++ TL + + + G K + E G++ +E+ R +L G ++
Sbjct: 72 LIVSDMDSTLITIECVDEIAEGVGLKNKVAEITERSMRGELDFEQSLRSRVALLAGLDEK 131
Query: 67 EVEETFKDV-KLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYANELVF 125
+ + +++V KL PGA+ L K + K ++SGG +++ L ++ +AN L
Sbjct: 132 ILADVYENVLKLSPGAEFLLDECKRHDVKFLLVSGGFTFFTERLQQRLGFEYQHANILEI 191
Query: 126 KDGKVTGDVIVR-VTFDNKGEILNELKR--ALRPKVTVAVGDWKNDVPMFKVADVSIS 180
++G++TG + R + K ++L E + L+P +A+GD ND+PM K A + ++
Sbjct: 192 ENGRLTGRLKGRIIDAQAKADLLREYRSLLGLQPHQVLAMGDGANDIPMLKEAGIGVA 249
>pir||E70860 probable serB2 protein - Mycobacterium tuberculosis (strain H37RV)
>gi|2791640|emb|CAA16127.1| (AL021287) serB2
[Mycobacterium tuberculosis]
Length = 409
Score = 71.8 bits (173), Expect = 6e-12
Identities = 50/179 (27%), Positives = 87/179 (47%), Gaps = 3/179 (1%)
Query: 5 KKLMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGRR 64
K+L+ FD++ TL EML + G + E G++ + E + + G
Sbjct: 179 KRLIVFDVDSTLVQGEVIEMLAARAGAQGQVAAITEAAMRGELDFAESLQRRVATLAGLP 238
Query: 65 KEEVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYANELV 124
+++ + ++L PGA+ L+ GF+ ++SGG + + +A L +D V +NEL
Sbjct: 239 ATVIDDVAEQLELMPGARTTIRTLRRLGFRCGVVSGGFRRIIEPLARELMLDFVASNELE 298
Query: 125 FKDGKVTGDVI-VRVTFDNKGEILNEL--KRALRPKVTVAVGDWKNDVPMFKVADVSIS 180
DG +TG V+ V K + L + + + + TVAVGD ND+ M A + I+
Sbjct: 299 IVDGILTGRVVGPIVDRPGKAKALRDFASQYGVPMEQTVAVGDGANDIDMLGAAGLGIA 357
>pir||A82087 phosphoserine phosphatase VC2345 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9656913|gb|AAF95488.1|
(AE004305) phosphoserine phosphatase [Vibrio cholerae]
Length = 328
Score = 69.1 bits (166), Expect = 4e-11
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 10/203 (4%)
Query: 7 LMAFDLEGTLTDMISWEMLHRKFGTCEKAKKHAELFFSGKISYEEWARLDASLWVGRRKE 66
L+ D++ T + + + + G E+ + E G++ +E+ RL S ++
Sbjct: 109 LIVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLKDAPEQ 168
Query: 67 EVEETFKDVKLKPGAQELASWLKGNGFKIAIISGGLMCLAKKIANILNVDHVYANELVFK 126
+ + + + L P EL + L G+K+AI SGG + + L++D+ +N L
Sbjct: 169 ILSQVRETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIV 228
Query: 127 DGKVTGDVIVR-VTFDNKGEILNELKRALRPKV--TVAVGDWKNDVPMFKVADVSISLGH 183
GK+TG V+ V+ K +IL L + ++ TVAVGD ND+ M A + ++
Sbjct: 229 SGKLTGQVLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVA--- 285
Query: 184 DHADYNARDLYEVKRILEELFQG 206
Y+A+ E K F G
Sbjct: 286 ----YHAKPKVEAKAQTAVRFAG 304
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.137 0.405
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79533335
Number of Sequences: 2977
Number of extensions: 3162331
Number of successful extensions: 8593
Number of sequences better than 1.0e-10: 18
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 8570
Number of HSP's gapped (non-prelim): 18
length of query: 210
length of database: 189,106,746
effective HSP length: 54
effective length of query: 156
effective length of database: 156,788,448
effective search space: 24458997888
effective search space used: 24458997888
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 163 (67.9 bits)