BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1214 (gltB-2) DE:GLUTAMATE SYNTHASE SMALL CHAIN.
         (475 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||B75024 glutamate synthase small chain. PAB1214 - Pyrococcus...   957  0.0
pir||D71200 probable glutamate synthase small chain - Pyrococcus...   899  0.0
pir||E75069 glutamate synthase small chain PAB1738 - Pyrococcus ...   788  0.0
dbj|BAA21091.1| (D86223) glutamate synthase [Pyrococcus sp.]          765  0.0
pir||D71076 probable glutamate synthase small chain - Pyrococcus...   742  0.0
pir||H72230 glutamate synthase, beta subunit - Thermotoga mariti...   509  e-143
pir||D71288 probable glutamate synthase (gltA) - syphilis spiroc...   405  e-112
pir||A70477 glutamate synthase small subunit gltD - Aquifex aeol...   395  e-109
pir||JC5184 glutamate synthase (GOGAT) (EC 1.4.1.-) small chain ...   283  3e-75
sp|P09832|GLTD_ECOLI GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN (GLU...   283  3e-75
sp|P37127|AEGA_ECOLI AEGA PROTEIN >gi|7451584|pir||C65022 yffG p...   279  5e-74
dbj|BAA16342.1| (D90875) similar to [SwissProt Accession Number ...   279  5e-74
pir||G83017 glutamate synthase small chain PA5035 [imported] - P...   272  5e-72
gb|AAB18329.1| (U73807) formate dehydrogenase beta subunit [Moor...   270  3e-71
pir||G82083 glutamate synthase, small subunit VC2377 [imported] ...   266  4e-70
gb|AAG38999.1|AF192408_3 (AF192408) NADPH-dependent glutamate sy...   265  8e-70
pir||H82523 glutamate synthase, beta subunit XF2709 [imported] -...   264  2e-69
emb|CAC11556.1| (AL445064) GLUTAMATE SYNTHASE [NADPH] SMALL CHAI...   259  4e-68
sp|Q05756|GLTD_AZOBR GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN (GLU...   256  4e-67
sp|Q46820|YGFT_ECOLI HYPOTHETICAL 69.1 KD PROTEIN IN KDUI-LYSS I...   255  9e-67
pir||G65072 hypothetical protein b2887 - Escherichia coli (strai...   255  9e-67
gb|AAD56915.1|AF180145_7 (AF180145) glutamate synthase small sub...   249  7e-65
pir||G72281 glutamate synthase, beta subunit - Thermotoga mariti...   240  3e-62
pir||G83590 probable oxidoreductase PA0440 [imported] - Pseudomo...   239  5e-62
gb|AAB46944.1| (L34011) Fe-S center and glutamate synthase (GltD...   239  6e-62
gb|AAD18034.1| (AF119099) glutamate synthase small subunit [Pseu...   238  8e-62
pir||B29617 glutamate synthase (NADPH) (EC 1.4.1.13) small chain...   230  3e-59
pir||G70655 probable small subunit of NADH-dependent glutamate s...   224  2e-57
pir||T34868 probable glutamate synthase small chain - Streptomyc...   219  6e-56
pir||JE0142 glutamate synthase (EC 1.4.1.-) small chain - Rhodob...   219  8e-56
emb|CAA73084.1| (Y12481) glutamine--pyruvate aminotransferase [R...   218  1e-55
gb|AAC17982.1| (AF031406) NADPH dependent glutamate synthase sma...   213  3e-54
dbj|BAA35120.1| (AB008845) NADH dependent Glutamate Synthase [Or...   212  1e-53
pir||A64983 hypothetical protein b2146 - Escherichia coli (strai...   210  4e-53
sp|Q28007|DPYD_BOVIN DIHYDROPYRIMIDINE DEHYDROGENASE [NADP+] (DP...   208  8e-53
sp|Q28943|DPYD_PIG DIHYDROPYRIMIDINE DEHYDROGENASE [NADP+] PRECU...   205  1e-51
pir||H69634 glutamate synthase (small subunit) gltB - Bacillus s...   203  4e-51
dbj|BAA33218.1| (D85035) dihydropyrimidine dehydrogenase [Rattus...   203  4e-51
pir||S74625 NADH-glutamate synthase small chain gltD - Synechocy...   203  5e-51
pir||F65071 hypothetical protein b2878 - Escherichia coli (strai...   202  8e-51
sp|Q03460|GLSN_MEDSA GLUTAMATE SYNTHASE [NADH] PRECURSOR (NADH-G...   201  1e-50
pir||B75551 glutamate synthase, small subunit - Deinococcus radi...   201  1e-50
dbj|BAA12742.1| (D85230) small subunit of NADH-dependent glutama...   200  2e-50
gb|AAB41904.1| (L37606) NADH-dependent glutamate synthase [Medic...   199  4e-50
gi|4503373 dihydropyrimidine dehydrogenase [Homo sapiens] >gi|24...   199  6e-50
gb|AAB51366.1| (U20938) No definition line found [Homo sapiens] ...   199  6e-50
gb|AAF49409.1| (AE003526) CG9674 gene product [alt 1] [Drosophil...   199  7e-50
gb|AAF49410.1| (AE003526) CG9674 gene product [alt 3] [Drosophil...   199  7e-50
gi|6320030 Glutamate synthase (NADPH); Glt1p [Saccharomyces cere...   198  9e-50
dbj|BAA97323.1| (AB020754) NADH-dependent glutamate synthase [Ar...   198  9e-50
pir||F82085 glutamate synthase, small chain VC2374 [imported] - ...   198  9e-50
sp|Q12680|GLT1_YEAST GLUTAMATE SYNTHASE [NADPH] PRECURSOR (NADPH...   198  1e-49
dbj|BAB05448.1| (AP001513) glutamate synthase (small subunit) [B...   198  1e-49
sp|Q18164|DPYD_CAEEL PROBABLE DIHYDROPYRIMIDINE DEHYDROGENASE [N...   197  2e-49
pir||T49818 probable glutamate synthase (NADPH) [imported] - Neu...   193  3e-48
pir||T24629 glutamate synthase (NADH) (EC 1.4.1.14) precursor [s...   191  2e-47
gb|AAD41676.1|AF082880_2 (AF082880) glutamate synthase small sub...   189  5e-47
pir||G72689 probable glutamate synthase small chain APE0935 - Ae...   183  4e-45
gb|AAF46461.2| (AE003446) Reg-3 gene product [Drosophila melanog...   182  1e-44
pir||D81416 glutamate synthase (NADPH) (EC 1.4.1.13) small chain...   181  1e-44
pir||T28635 glutamate synthase (NADH) (EC 1.4.1.14) - malaria pa...   175  1e-42
gi|11421673 dihydropyrimidine dehydrogenase [Homo sapiens]            165  1e-39
dbj|BAA75930.1| (AB024708) glutamine 2-oxoglutarate aminotransfe...   161  1e-38
gb|AAG13082.1| (U84760) DsrL [Allochromatium vinosum]                 161  2e-38
dbj|BAA83927.1| (AB024555) GLTB [Bacillus halodurans]                  97  4e-19
pir||D71016 probable thioredoxin reductase - Pyrococcus horikosh...    88  2e-16
pir||D75116 thioredoxin reductase (trxb) PAB0500 - Pyrococcus ab...    83  6e-15
emb|CAB60604.1| (AL132865) cDNA EST yk60c5.5 comes from this gen...    83  6e-15
emb|CAC12113.1| (AL445066) probable thioredoxin reductase [Therm...    81  3e-14
sp|O06465|AHPF_XANCH ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F >gi...    78  3e-13
gb|AAD29664.1|AF124757_24 (AF124757) thioredoxin reductase [Zymo...    78  3e-13
dbj|BAB07290.1| (AP001519) thioredoxin reductase (NADPH) [Bacill...    77  4e-13
pir||C75513 probable ferredoxin/ferredoxin--NADP reductase - Dei...    76  1e-12
pir||A75330 thioredoxin reductase - Deinococcus radiodurans (str...    76  1e-12
sp|P52213|TRXB_CLOLI THIOREDOXIN REDUCTASE (TRXR) >gi|2117556|pi...    76  1e-12
gb|AAC97377.1| (AF107264) glutamate synthase small subunit [Rhiz...    76  1e-12
pir||C75218 probable monooxygenase PAB0184 - Pyrococcus abyssi (...    76  1e-12
gi|11499149 thioredoxin reductase (trxB) [Archaeoglobus fulgidus...    75  1e-12
gb|AAG13948.1|AF283287_1 (AF283287) ferrodoxin-NADP(+) reductase...    75  1e-12
emb|CAA11546.1| (AJ223781) thioredoxin reductase [Staphylococcus...    75  2e-12
pir||T45351 ferredoxin [imported] - Mycobacterium leprae >gi|244...    74  3e-12
sp|Q10547|FPRB_MYCTU PROBABLE FERREDOXIN/FERREDOXIN--NADP REDUCT...    74  3e-12
pir||D72383 NADH oxidase - Thermotoga maritima (strain MSB8) >gi...    74  3e-12
emb|CAC01564.1| (AL391039) 2,4-dienoyl-CoA reductase [NADPH] [St...    74  3e-12
pir||A70920 probable adrenodoxin and NADPH ferredoxin reductase ...    74  4e-12
pir||H71171 probable NADH oxidase - Pyrococcus horikoshii >gi|32...    72  1e-11
emb|CAB60462.1| (AL132856) putative ferredoxin/ferredoxin-NADP r...    72  1e-11
sp|O66790|TRXB_AQUAE THIOREDOXIN REDUCTASE (TRXR) >gi|7427756|pi...    72  2e-11
sp|P56522|ADRO_RAT NADPH:ADRENODOXIN OXIDOREDUCTASE PRECURSOR (A...    72  2e-11
pir||D75107 NADH oxidase (noxa-2) PAB1931 - Pyrococcus abyssi (s...    71  2e-11
pir||T45314 probable ferredoxin [imported] - Mycobacterium lepra...    71  3e-11
sp|O05204|AHPF_STAAU ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F >gi...    71  4e-11
gi|6679767 ferredoxin reductase [Mus musculus] >gi|3023277|sp|Q6...    70  5e-11
pir||G69759 thioredoxin reductase homolog ycgT - Bacillus subtil...    70  5e-11
sp|Q9Z8M4|TRXB_CHLPN THIOREDOXIN REDUCTASE (TRXR) >gi|7431887|pi...    70  5e-11
gi|4758354 ferredoxin reductase; adrenodoxin reductase; Ferredox...    70  6e-11
gb|AAA51668.1| (M58509) adrenodoxin reductase [Homo sapiens]           70  6e-11
gb|AAA51669.1| (M58509) adrenodoxin reductase [Homo sapiens]           70  6e-11
sp|P22570|ADRO_HUMAN NADPH:ADRENODOXIN OXIDOREDUCTASE PRECURSOR ...    70  6e-11
pir||H83044 2,4-dienoyl-CoA reductase FadH2 PA4814 [imported] - ...    70  6e-11

>pir||B75024 glutamate synthase small chain. PAB1214 - Pyrococcus abyssi
           (strain Orsay) >gi|5459146|emb|CAB50632.1| (AJ248288)
           GLUTAMATE SYNTHASE SMALL CHAIN. [Pyrococcus abyssi]
           Length = 475
           
 Score =  957 bits (2448), Expect = 0.0
 Identities = 475/475 (100%), Positives = 475/475 (100%)

Query: 1   MPKLIKERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNI 60
           MPKLIKERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNI
Sbjct: 1   MPKLIKERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNI 60

Query: 61  DIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPI 120
           DIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPI
Sbjct: 61  DIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPI 120

Query: 121 NIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEV 180
           NIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEV
Sbjct: 121 NIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEV 180

Query: 181 TIFEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEY 240
           TIFEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEY
Sbjct: 181 TIFEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEY 240

Query: 241 DAIFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIG 300
           DAIFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIG
Sbjct: 241 DAIFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIG 300

Query: 301 AGNTAMDAARSALRLGAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDE 360
           AGNTAMDAARSALRLGAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDE
Sbjct: 301 AGNTAMDAARSALRLGAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDE 360

Query: 361 EGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLK 420
           EGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLK
Sbjct: 361 EGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLK 420

Query: 421 VREDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSKSA 475
           VREDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSKSA
Sbjct: 421 VREDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSKSA 475


>pir||D71200 probable glutamate synthase small chain - Pyrococcus horikoshii
           >gi|3258312|dbj|BAA30995.1| (AP000007) 476aa long
           hypothetical glutamate synthase small chain [Pyrococcus
           horikoshii]
           Length = 476
           
 Score =  899 bits (2297), Expect = 0.0
 Identities = 433/475 (91%), Positives = 462/475 (97%)

Query: 1   MPKLIKERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNI 60
           MPKLIKERVPTPER   ER++DF+EVNLGYTWELAL+EAERCLQCP EYAPCIKGCPVNI
Sbjct: 1   MPKLIKERVPTPERPVEERIKDFDEVNLGYTWELALKEAERCLQCPVEYAPCIKGCPVNI 60

Query: 61  DIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPI 120
           +IPGFI+ALREN+DNPRKAV+EAL+VIWACNSLPAITGRVCPQEDQCEG CVVGKVGDP+
Sbjct: 61  NIPGFIKALRENKDNPRKAVKEALRVIWACNSLPAITGRVCPQEDQCEGACVVGKVGDPV 120

Query: 121 NIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEV 180
           NIGKLERFVADYAR+HGIDDELLMEEI+ IK+NGK+VAVIGAGPAGLTCAAELAKMGY+V
Sbjct: 121 NIGKLERFVADYARQHGIDDELLMEEIKNIKKNGKKVAVIGAGPAGLTCAAELAKMGYDV 180

Query: 181 TIFEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEY 240
           TI+EALHEPGGVLAYGIPEFRLPKEILRKELKKL  LGV+IKTDHIVGRTVTIPELL+EY
Sbjct: 181 TIYEALHEPGGVLAYGIPEFRLPKEILRKELKKLSILGVKIKTDHIVGRTVTIPELLKEY 240

Query: 241 DAIFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIG 300
           DAIFI TGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPI+VGKRVIVIG
Sbjct: 241 DAIFIGTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIIVGKRVIVIG 300

Query: 301 AGNTAMDAARSALRLGAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDE 360
           AGNTAMDAARSALRLGAEVIIAYRRG+EDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDE
Sbjct: 301 AGNTAMDAARSALRLGAEVIIAYRRGEEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDE 360

Query: 361 EGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLK 420
            GRVKAVKFEKMKPLEERD RGKRKI+GTGEY+TVE DTV+IAIGQTPN+I+W+TTPGLK
Sbjct: 361 NGRVKAVKFEKMKPLEERDSRGKRKIIGTGEYVTVETDTVVIAIGQTPNRIIWKTTPGLK 420

Query: 421 VREDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSKSA 475
           VRE+GTI+VDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSK +
Sbjct: 421 VRENGTIVVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSKKS 475


>pir||E75069 glutamate synthase small chain PAB1738 - Pyrococcus abyssi  (strain
           Orsay) >gi|5458370|emb|CAB49858.1| (AJ248286) GLUTAMATE
           SYNTHASE SMALL CHAIN [Pyrococcus abyssi]
           Length = 474
           
 Score =  788 bits (2012), Expect = 0.0
 Identities = 389/475 (81%), Positives = 428/475 (89%), Gaps = 1/475 (0%)

Query: 1   MPKLIKERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNI 60
           MPKLIKERVPTPERS  ER+RDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNI
Sbjct: 1   MPKLIKERVPTPERSVEERIRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNI 60

Query: 61  DIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPI 120
           DIPGFIRALRENRD+P KAVREALK+IW  NSLPAITGRVCPQEDQCEGVCVVGKVGDP+
Sbjct: 61  DIPGFIRALRENRDDPDKAVREALKIIWDSNSLPAITGRVCPQEDQCEGVCVVGKVGDPV 120

Query: 121 NIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEV 180
           NIGKLERFVADYAR+HGI+DELL E+IRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEV
Sbjct: 121 NIGKLERFVADYARQHGIEDELLEEQIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEV 180

Query: 181 TIFEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEY 240
           TIFEALHEPGGVLAYGIPEFRLPKEI++KE++KLK LGV+I+T+ +VG+TVT  EL EE+
Sbjct: 181 TIFEALHEPGGVLAYGIPEFRLPKEIVKKEVEKLKRLGVKIETNVLVGKTVTFEELREEF 240

Query: 241 DAIFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIG 300
           DAIFI TGAGTP++   PG+NLNGIYSANEFLTRINLMKAYKFPEYDTPI +GKRV VIG
Sbjct: 241 DAIFIGTGAGTPRIYPWPGVNLNGIYSANEFLTRINLMKAYKFPEYDTPIKIGKRVAVIG 300

Query: 301 AGNTAMDAARSALRLGAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDE 360
           AGNTAMDAARSALRLGAEV I YRR +++MTAR EE++HA+EEGVKFMF V+P  FIGDE
Sbjct: 301 AGNTAMDAARSALRLGAEVWILYRRTRKEMTAREEEIKHAEEEGVKFMFLVSPKRFIGDE 360

Query: 361 EGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLK 420
            G +KA++ EKMK L E D+ G+R+ + TGE   +E DT IIAIGQTPNK   +T P LK
Sbjct: 361 NGNLKAIELEKMK-LGEPDETGRRRPIPTGETFVMEFDTAIIAIGQTPNKTFLQTVPELK 419

Query: 421 VREDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSKSA 475
           V E G IIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIH+YLS S+
Sbjct: 420 VDEKGRIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHKYLSSSS 474


>dbj|BAA21091.1| (D86223) glutamate synthase [Pyrococcus sp.]
           Length = 481
           
 Score =  765 bits (1953), Expect = 0.0
 Identities = 375/471 (79%), Positives = 425/471 (89%), Gaps = 2/471 (0%)

Query: 3   KLIKERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDI 62
           KLIKERVPTPER P ER++DF EVNLGYT+ELA++EAERCLQCP EYAPCIKGCPV+I+I
Sbjct: 5   KLIKERVPTPERPPEERIKDFKEVNLGYTFELAVKEAERCLQCPYEYAPCIKGCPVHINI 64

Query: 63  PGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINI 122
           PGFI  L E RD+P KAV+EAL VIWACNSLPA TGRVCPQEDQCE  CV+GKVGD INI
Sbjct: 65  PGFISKLVEYRDDPDKAVKEALNVIWACNSLPATTGRVCPQEDQCEMNCVMGKVGDKINI 124

Query: 123 GKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTI 182
           GKLERFVADYARE GID+ELL E I  I++ G++VA+IGAGPAGLT A ELAK+GY+VTI
Sbjct: 125 GKLERFVADYAREKGIDEELLFEIIPKIEKKGQKVAIIGAGPAGLTAAGELAKLGYDVTI 184

Query: 183 FEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDA 242
           +EALHEPGGVL YGIPEFRLPKEI+ KE++KL+ LGV+I TDH+VGRTVTI ELL+EYDA
Sbjct: 185 YEALHEPGGVLMYGIPEFRLPKEIVNKEIEKLRKLGVKILTDHVVGRTVTIEELLQEYDA 244

Query: 243 IFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAG 302
           +FI +GAGTP+L+  PGINLNGIY+ANEFLTR+NLMKAY FPEYDTP+ VGK+VIVIGAG
Sbjct: 245 VFIGSGAGTPRLINAPGINLNGIYTANEFLTRVNLMKAYLFPEYDTPVYVGKKVIVIGAG 304

Query: 303 NTAMDAARSALRLGAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEG 362
           NTAMDAARSA R GAEV IAYRRG+ED++AR EEV+HAKEEG+KF++FVNPVEFIGDE G
Sbjct: 305 NTAMDAARSARRFGAEVTIAYRRGEEDVSAREEEVEHAKEEGIKFVYFVNPVEFIGDENG 364

Query: 363 RVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVR 422
           RVKAVKFEKMK L+ERD RGKRKIVGTGEY+T+EADTVIIAIG+ PN+++   TPGLKV 
Sbjct: 365 RVKAVKFEKMKALDERDARGKRKIVGTGEYVTLEADTVIIAIGKHPNRLI-INTPGLKV- 422

Query: 423 EDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSK 473
           E G I+VDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL+K
Sbjct: 423 ERGKIVVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLTK 473


>pir||D71076 probable glutamate synthase small chain - Pyrococcus horikoshii
           >gi|3257287|dbj|BAA29970.1| (AP000004) 472aa long
           hypothetical glutamate synthase small chain [Pyrococcus
           horikoshii]
           Length = 472
           
 Score =  742 bits (1896), Expect = 0.0
 Identities = 369/474 (77%), Positives = 414/474 (86%), Gaps = 9/474 (1%)

Query: 1   MPKLIKERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNI 60
           MPKLIKERVPTPER   ER++DF EVNLGYT+ELA +EAERCLQCP EYAPCIKGCPV+I
Sbjct: 1   MPKLIKERVPTPERPVEERIKDFKEVNLGYTFELAKKEAERCLQCPPEYAPCIKGCPVHI 60

Query: 61  DIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPI 120
           +IP FI  ++E        ++ AL++IW  N+LPAITGRVCPQEDQCEG CVVGKVGDP+
Sbjct: 61  NIPAFIAKIKEGD------IKGALRIIWNDNTLPAITGRVCPQEDQCEGACVVGKVGDPV 114

Query: 121 NIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEV 180
           NIGKLERFVADYAREHGI++ELL E       +  +VAV+GAGPAGLTCA ELAKMGY+V
Sbjct: 115 NIGKLERFVADYAREHGIEEELLREFTEKCDGSKGKVAVVGAGPAGLTCAGELAKMGYKV 174

Query: 181 TIFEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEY 240
           TIFEALH+PGGVLAYGIPEFRLPKEIL  ELKKLK LGVEI+TDH+VG+TVT+ ELL+EY
Sbjct: 175 TIFEALHKPGGVLAYGIPEFRLPKEILDHELKKLKMLGVEIRTDHVVGKTVTLDELLQEY 234

Query: 241 DAIFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIG 300
           DA+FI TGAGTPKLL IPGI L+ IYSANEFLTRINLMKAY+FPEYDTPI VGK+VIVIG
Sbjct: 235 DAVFIGTGAGTPKLLNIPGILLDRIYSANEFLTRINLMKAYEFPEYDTPIAVGKKVIVIG 294

Query: 301 AGNTAMDAARSALRLGAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDE 360
           AGNTAMDAARSALRLGAEV IAYRRG+EDMTAR EE++HA+EEGVKF FF+ PVEFIGDE
Sbjct: 295 AGNTAMDAARSALRLGAEVTIAYRRGREDMTAREEEIKHAEEEGVKFEFFLQPVEFIGDE 354

Query: 361 EGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPG-L 419
            GRVKAVKFE+ KPLEERD +GKRKIVGTGEY+T+EADTVIIAIG  PNKI+  T  G L
Sbjct: 355 NGRVKAVKFERTKPLEERDSKGKRKIVGTGEYVTLEADTVIIAIGLEPNKII--TEDGRL 412

Query: 420 KVREDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSK 473
           K   DGTI+VDENLMTSIPGVFAGGDAIRGEATVILAMGDG++AAKAI EY+ +
Sbjct: 413 KTNPDGTIVVDENLMTSIPGVFAGGDAIRGEATVILAMGDGKRAAKAIDEYIRR 466


>pir||H72230 glutamate synthase, beta subunit - Thermotoga maritima  (strain
           MSB8) >gi|4982213|gb|AAD36707.1|AE001806_17 (AE001806)
           glutamate synthase, beta subunit [Thermotoga maritima]
           Length = 468
           
 Score =  509 bits (1296), Expect = e-143
 Identities = 269/470 (57%), Positives = 341/470 (72%), Gaps = 19/470 (4%)

Query: 8   RVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIR 67
           + P  E+SP  R R+F EV LGYT E AL EA+RCLQCP    PC+ GCPV IDIPGFIR
Sbjct: 5   KTPMKEQSPESRRRNFEEVALGYTLEEALEEAQRCLQCPTH--PCVSGCPVEIDIPGFIR 62

Query: 68  ALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGD--PINIGKL 125
            LR+ +      + E+ +++ + N+LPA+ GRVCPQE QCE  CVVGK+ D  P+ IG+L
Sbjct: 63  KLRDGK------LEESYRILKSYNNLPAVCGRVCPQEVQCESRCVVGKMKDSEPVAIGRL 116

Query: 126 ERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEA 185
           ERFVAD+A E+  +D   ++ + G K+  ++VAV+G+GPAGLT AA+LAKMGY V IFEA
Sbjct: 117 ERFVADWAAENLEED---VKPLAGSKK--EKVAVVGSGPAGLTAAADLAKMGYHVDIFEA 171

Query: 186 LHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFI 245
            H+PGGVL YGIPEFRLPK I+ +E+  ++ LGV    + +VG+TV + ELL EYDA+FI
Sbjct: 172 FHKPGGVLVYGIPEFRLPKRIVEREVSYIRKLGVNFHLNTVVGKTVKVKELLSEYDAVFI 231

Query: 246 STGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTA 305
            TGAGTPK + IPG NLNG+YSANEFLTR+NLMKAY FPEYDTPI VGK+V VIGAGNTA
Sbjct: 232 GTGAGTPKFMGIPGTNLNGVYSANEFLTRVNLMKAYLFPEYDTPIRVGKKVAVIGAGNTA 291

Query: 306 MDAARSALRLGAE-VIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRV 364
           MDAARSALRLGAE V I YRR + +M AR EE  HA EEG++F++   P+ +IGD  G V
Sbjct: 292 MDAARSALRLGAEKVYIVYRRTEREMPARREEYHHALEEGIEFLWLTLPIRYIGDANGNV 351

Query: 365 KAVKFEKMKPLEERDKRGK-RKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVRE 423
           +A++  +M+ L+E D  G+ R +   G    +E D VI AIGQ PN++L    PGL++ E
Sbjct: 352 EAMECVRME-LKEADGSGRPRPVPIEGSNFVLEVDMVIEAIGQGPNRVLLSEFPGLELNE 410

Query: 424 DGTIIVDENL-MTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLS 472
            G I  DE+   TS+ GVFAGGD + G ATVI AMG G+KAA+ IH YL+
Sbjct: 411 RGYIKADEDTGATSVKGVFAGGDIVTGAATVIKAMGAGKKAAQFIHSYLT 460


>pir||D71288 probable glutamate synthase (gltA) - syphilis spirochete
           >gi|3323040|gb|AAC65703.1| (AE001245) glutamate synthase
           (gltA) [Treponema pallidum]
           Length = 518
           
 Score =  405 bits (1029), Expect = e-112
 Identities = 220/468 (47%), Positives = 306/468 (65%), Gaps = 24/468 (5%)

Query: 16  PVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDN 75
           P +R     E  LG+T + AL E++RCL C  +  PC+KGCPV + IP FI  ++     
Sbjct: 67  PKKRSLLMQEAALGFTEQQALVESQRCLNCKTK--PCVKGCPVGVPIPEFIACVQ----- 119

Query: 76  PRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGK----VGDPINIGKLERFVAD 131
            R A +EA+ +I   + LPAI GRVCP E QC+  C VGK    V   ++IG LERFVAD
Sbjct: 120 -RGAFKEAVDIIKTTSLLPAICGRVCPHERQCQLQCTVGKMFKDVSKAVSIGALERFVAD 178

Query: 132 YAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGG 191
           + R+HG   ++ +          K+VAVIG+GPAGL  A++ A+ G+ VT+FEALH+PGG
Sbjct: 179 WERQHG---QITVPYCA--PSTHKKVAVIGSGPAGLAVASDTARAGHSVTVFEALHKPGG 233

Query: 192 VLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEY--DAIFISTGA 249
           V+ YGIPEFRLPKE++  E++ LK +GV  + + +VGRT T+ +L  +Y  DA+FI TGA
Sbjct: 234 VVTYGIPEFRLPKEVVVTEIETLKKMGVTFRMNFLVGRTATLEQLFSQYGFDAVFIGTGA 293

Query: 250 GTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAA 309
           G P+ + I G  L G+++AN++LTR  LMKAY     DTP+   K V+V+G GN A+D++
Sbjct: 294 GLPRFMNIEGEELCGVFAANDYLTRATLMKAYDTAHADTPVYAAKSVVVVGGGNVAVDSS 353

Query: 310 RSALRLGAE-VIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVK 368
           R+ALRLGAE V   YR+ + DMTA +EE+  A++EGV F F       +GDEEG V+AV 
Sbjct: 354 RTALRLGAEQVHCLYRKTRADMTACVEEIAQAEDEGVTFHFLCQTTRILGDEEGNVRAVV 413

Query: 369 FEKMKPLEERDKRGKRKIVGTGE-YITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTI 427
           F   +  +E+   G+R  +  G+    + AD VI+A+G   N ++ +TT  L V E GTI
Sbjct: 414 F---RDCQEQIDAGERVFLPCGDAECKLAADAVIVAVGNGSNPLMAKTTRSLAVSERGTI 470

Query: 428 IVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSKSA 475
           +VDE+  TSIPGV+AGGD + G ATVI AMG GR+AA +I+ YL++ A
Sbjct: 471 VVDEDQRTSIPGVWAGGDIVLGAATVIRAMGQGRRAAASINAYLAQKA 518


>pir||A70477 glutamate synthase small subunit gltD - Aquifex aeolicus
           >gi|2984275|gb|AAC07800.1| (AE000770) glutamate synthase
           small subunit gltD [Aquifex aeolicus]
           Length = 476
           
 Score =  395 bits (1004), Expect = e-109
 Identities = 225/475 (47%), Positives = 302/475 (63%), Gaps = 25/475 (5%)

Query: 7   ERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFI 66
           +R   P   P ERV+ F E  LGY+  LAL EA+RCL C      CIKGCPV++DIPGFI
Sbjct: 9   DRNKEPTLPPEERVKTFREFELGYSVNLALDEAQRCLFCKDAEQRCIKGCPVHVDIPGFI 68

Query: 67  RALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVV--------GKVGD 118
           + + E        +  A KVI   +  P+I GRVCPQE QCEG C++           G 
Sbjct: 69  KKITEGD------LVGAYKVITQSDIFPSICGRVCPQERQCEGSCILYYDTVRNRKNKGL 122

Query: 119 PINIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGY 178
           P+ IG LE+FV D+ R  GI+ E   E   G      RVAVIGAGPAGL+CA ELAK G+
Sbjct: 123 PVAIGALEKFVGDFIRISGIEIEEEKEPPTGF-----RVAVIGAGPAGLSCAHELAKKGH 177

Query: 179 EVTIFEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLE 238
           EV ++EAL +PGGV+ YGIP  RL K I+  E+K+L+ LG++    +++G+ +T+ EL E
Sbjct: 178 EVHVYEALPKPGGVMYYGIPNARLDKSIIEWEVKRLEKLGIKFFYGYLIGKNITLQELRE 237

Query: 239 EYDAIFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIV 298
           +YDA+FI+ GAG  KL  +PG +L G+YSA +FL R+NL KA +FP+   P+ +GKR ++
Sbjct: 238 KYDAVFIAVGAGRGKL-GLPGDHLKGVYSAIDFLMRVNLYKANEFPKKGVPVELGKRTVI 296

Query: 299 IGAGNTAMDAARSALRLGAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIG 358
           IG G TA+D A +A RLG E  + YRR +E  +AR EE  H  EEGVK  +   PVE IG
Sbjct: 297 IGGGFTAVDCAITANRLGVETHVVYRRTRETSSARQEEWDHLMEEGVKIHWLTQPVEVIG 356

Query: 359 DEEGRVKAVKFEKMKPLEERDKRGKRK--IVGTGEYITVEADTVIIAIGQTPNKILWRTT 416
           +E+G V  +K  KM+ L E D+ G+ +   V   E+I +E D+VI AIGQ  N I +  +
Sbjct: 357 NEKGEVVGLKCIKME-LGEPDESGRPRPVPVPNSEHI-IECDSVIFAIGQRANPIAYEGS 414

Query: 417 PGLKVREDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
            G+K  + GTI V+E   T++ GVFAGGD I G   V++A+  G++AAK IHEYL
Sbjct: 415 -GIKTTKWGTIEVNERYETNLEGVFAGGDVINGGDRVVVALAHGKEAAKYIHEYL 468


>pir||JC5184 glutamate synthase (GOGAT) (EC 1.4.1.-) small chain - Thiobacillus
           ferrooxidans >gi|1033071|gb|AAA79783.1| (U36427)
           glutamate synthase small subunit gltD [Acidithiobacillus
           ferrooxidans]
           Length = 465
           
 Score =  283 bits (717), Expect = 3e-75
 Identities = 174/466 (37%), Positives = 252/466 (53%), Gaps = 22/466 (4%)

Query: 12  PERSPVERVRD-FNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALR 70
           P++  VE  R+ F E+   +    A  +A+RCL C   Y  C   CPV+  IP +++ + 
Sbjct: 14  PKKLDVEERREAFREIYQSFDLGSAQLQADRCLHCGNPY--CEWKCPVHNYIPNWLQLIV 71

Query: 71  ENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVA 130
           ENR      + EA  +    N+LP I GR+CPQ+  CEG C +   G  + IG LERFV 
Sbjct: 72  ENR------LEEAATLSHQTNTLPEICGRICPQDRLCEGACTLNATGGAVTIGNLERFVT 125

Query: 131 DYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPG 190
           + A       ++       I  NGKRVAV+G GPAGL CA  L + G EV +F+     G
Sbjct: 126 EEALARAWQPDM-----PDILPNGKRVAVVGGGPAGLGCADILNRAGTEVVVFDRYPAVG 180

Query: 191 GVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAG 250
           G+L +GIP F+L K ++ +    L+ +G+  + D  VGR +++ +LLE++DA+F+  G  
Sbjct: 181 GLLTFGIPSFKLEKAVVARRANLLQEMGIRFQLDTEVGRDISLGKLLEDFDAVFLGMGTY 240

Query: 251 TPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIV--VGKRVIVIGAGNTAMDA 308
           T K    PG  L G+  A  +L   N     + P+   P +   GKRV+V+G G+TAMD 
Sbjct: 241 TAKTGDFPGEKLPGVLKALSYLI-ANTRHLMQLPDPTLPYISLSGKRVVVLGGGDTAMDC 299

Query: 309 ARSALRLGA-EVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAV 367
            R+A+R GA +V   YRR +E+M     EV +A+EEGV F+F   PVE +GD        
Sbjct: 300 LRTAIRQGARQVTCVYRRDEENMPGSRREVANAREEGVHFLFHRQPVEVVGDAASGSPG- 358

Query: 368 KFEKMKPLEERDKRGKR--KIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDG 425
           +     P  E D RG+R  +I+   E + ++AD VIIA G  P+   W     +     G
Sbjct: 359 RASGGDPSGEPDARGRRHPEIIPGSEQV-LDADVVIIAFGFDPSPAPWFAEHHITTDSRG 417

Query: 426 TIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
            I  +    TS P +FAGGD  RG   V+ A+ +GR+AA+ I +YL
Sbjct: 418 RISTNAQFQTSNPRIFAGGDMRRGSDLVVTAVDEGRRAAQGILDYL 463


>sp|P09832|GLTD_ECOLI GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN (GLUTAMATE SYNTHASE BETA
           SUBUNIT) (NADPH-GOGAT) (GLTS BETA CHAIN)
           >gi|7448188|pir||G65112 glutamate synthase (NADPH) (EC
           1.4.1.13) small chain - Escherichia coli
           >gi|606152|gb|AAA58015.1| (U18997) glutamate synthase,
           small subunit [Escherichia coli]
           >gi|1789606|gb|AAC76245.1| (AE000400) glutamate
           synthase, small subunit [Escherichia coli K12]
           Length = 472
           
 Score =  283 bits (716), Expect = 3e-75
 Identities = 176/475 (37%), Positives = 266/475 (55%), Gaps = 26/475 (5%)

Query: 7   ERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFI 66
           +RV  P++    R  +F E+   ++   A  +A+RCL C   Y  C   CPV+  IP ++
Sbjct: 12  QRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQADRCLSCGNPY--CEWKCPVHNYIPNWL 69

Query: 67  RALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLE 126
           +   E R      + EA ++    N+LP + GRVCPQ+  CEG C +      + IG +E
Sbjct: 70  KLANEGR------IFEAAELSHQTNTLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIGNIE 123

Query: 127 RFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEAL 186
           R++ D A E G        ++ G+K+ GK+VA+IGAGPAGL CA  L + G +  +F+  
Sbjct: 124 RYINDKAFEMG-----WRPDMSGVKQTGKKVAIIGAGPAGLACADVLTRNGVKAVVFDRH 178

Query: 187 HEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFIS 246
            E GG+L +GIP F+L KE++ +  +    +G+E K +  VGR V + +LL +YDA+F+ 
Sbjct: 179 PEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDVQLDDLLSDYDAVFLG 238

Query: 247 TGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPE-YDTPIV--VGKRVIVIGAGN 303
            G        +   + +G+Y+A  FL   N  +   F E  D P V   GKRV+V+G G+
Sbjct: 239 VGTYQSMRGGLENEDADGVYAALPFLI-ANTKQLMGFGETRDEPFVSMEGKRVVVLGGGD 297

Query: 304 TAMDAARSALRLGAE-VIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEG 362
           TAMD  R+++R GA+ V  AYRR +E+M     EV++A+EEGV+F F V P+    +  G
Sbjct: 298 TAMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKNAREEGVEFKFNVQPLGIEVNGNG 357

Query: 363 RVKAVKFEKMKPLEERDKRGKRK--IVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLK 420
           +V  VK  + + + E D +G+R+  IV   E+I V AD VI+A G  P+ + W     ++
Sbjct: 358 KVSGVKMVRTE-MGEPDAKGRRRAEIVAGSEHI-VPADAVIMAFGFRPHNMEWLAKHSVE 415

Query: 421 VREDGTIIV----DENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
           +   G II     D    TS P +FAGGD +RG   V+ A+ +GRKAA  I  +L
Sbjct: 416 LDSQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRKAADGIMNWL 470


>sp|P37127|AEGA_ECOLI AEGA PROTEIN >gi|7451584|pir||C65022 yffG protein - Escherichia
           coli (strain K-12) >gi|1788811|gb|AAC75521.1| (AE000333)
           putative oxidoreductase, Fe-S subunit [Escherichia coli
           K12]
           Length = 659
           
 Score =  279 bits (706), Expect = 5e-74
 Identities = 171/469 (36%), Positives = 261/469 (55%), Gaps = 22/469 (4%)

Query: 12  PERSPVE-RVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALR 70
           P++  +E R   F+E+ L +  + A REA RCL+C  E++ C   CP++  IP +I  ++
Sbjct: 196 PDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCG-EHSVCEWTCPLHNHIPQWIELVK 254

Query: 71  ENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVA 130
                    +  A+++    N+LP ITGRVCPQ+  CEG C +      + IG +ER+++
Sbjct: 255 AGN------IDAAVELSHQTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTIGNIERYIS 308

Query: 131 DYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPG 190
           D A   G   +L       + +  KRVA+IGAGPAGL CA  L + G  VT+++   E G
Sbjct: 309 DQALAKGWRPDL-----SHVTKVDKRVAIIGAGPAGLACADVLTRNGVGVTVYDRHPEIG 363

Query: 191 GVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAG 250
           G+L +GIP F+L K +L +  +    +G+  + +  VG+ V++  LLE+YDA+F+  G  
Sbjct: 364 GLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVGKDVSLDSLLEQYDAVFVGVGTY 423

Query: 251 TPKLLKIPGINLNGIYSANEFL--TRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDA 308
                 +P  +  G+Y A  FL      +M   + PE       G  V+V+G G+TAMD 
Sbjct: 424 RSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAMDC 483

Query: 309 ARSALRLGA-EVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAV 367
            R+ALR GA  V  AYRR + +M    +EV++A+EEG  F F V PV    +E+G V  +
Sbjct: 484 VRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCGI 543

Query: 368 KFEKMKPLEERDKRGKRKIVGT-GEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGT 426
           +F + + L E D +G+R+ V   G    + AD VI+A G  P+ + W  + G+ V + G 
Sbjct: 544 RFLRTR-LGEPDAQGRRRPVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGR 602

Query: 427 IIVD----ENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
           II D        T+ P +FAGGDA+RG   V+ AM +GR AA+ I ++L
Sbjct: 603 IIADVESQYRYQTTNPKIFAGGDAVRGADLVVTAMAEGRHAAQGIIDWL 651


>dbj|BAA16342.1| (D90875) similar to [SwissProt Accession Number P37127]~start codon
           is not identified yet [Escherichia coli]
           Length = 671
           
 Score =  279 bits (706), Expect = 5e-74
 Identities = 171/469 (36%), Positives = 261/469 (55%), Gaps = 22/469 (4%)

Query: 12  PERSPVE-RVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALR 70
           P++  +E R   F+E+ L +  + A REA RCL+C  E++ C   CP++  IP +I  ++
Sbjct: 208 PDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCG-EHSVCEWTCPLHNHIPQWIELVK 266

Query: 71  ENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVA 130
                    +  A+++    N+LP ITGRVCPQ+  CEG C +      + IG +ER+++
Sbjct: 267 AGN------IDAAVELSHQTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTIGNIERYIS 320

Query: 131 DYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPG 190
           D A   G   +L       + +  KRVA+IGAGPAGL CA  L + G  VT+++   E G
Sbjct: 321 DQALAKGWRPDL-----SHVTKVDKRVAIIGAGPAGLACADVLTRNGVGVTVYDRHPEIG 375

Query: 191 GVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAG 250
           G+L +GIP F+L K +L +  +    +G+  + +  VG+ V++  LLE+YDA+F+  G  
Sbjct: 376 GLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVGKDVSLDSLLEQYDAVFVGVGTY 435

Query: 251 TPKLLKIPGINLNGIYSANEFL--TRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDA 308
                 +P  +  G+Y A  FL      +M   + PE       G  V+V+G G+TAMD 
Sbjct: 436 RSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAMDC 495

Query: 309 ARSALRLGA-EVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAV 367
            R+ALR GA  V  AYRR + +M    +EV++A+EEG  F F V PV    +E+G V  +
Sbjct: 496 VRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCGI 555

Query: 368 KFEKMKPLEERDKRGKRKIVGT-GEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGT 426
           +F + + L E D +G+R+ V   G    + AD VI+A G  P+ + W  + G+ V + G 
Sbjct: 556 RFLRTR-LGEPDAQGRRRPVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGR 614

Query: 427 IIVD----ENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
           II D        T+ P +FAGGDA+RG   V+ AM +GR AA+ I ++L
Sbjct: 615 IIADVESQYRYQTTNPKIFAGGDAVRGADLVVTAMAEGRHAAQGIIDWL 663


>pir||G83017 glutamate synthase small chain PA5035 [imported] - Pseudomonas
           aeruginosa (strain PAO1) >gi|1750398|gb|AAB39260.1|
           (U81261) glutamate synthase small subunit [Pseudomonas
           aeruginosa] >gi|9951324|gb|AAG08420.1|AE004916_9
           (AE004916) glutamate synthase small chain [Pseudomonas
           aeruginosa]
           Length = 477
           
 Score =  272 bits (689), Expect = 5e-72
 Identities = 171/463 (36%), Positives = 258/463 (54%), Gaps = 27/463 (5%)

Query: 18  ERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDNPR 77
           +R R+F E++  +  + A  +A RCL C   Y  C   CPV+  IP +++ + E      
Sbjct: 31  QRKREFVEIHDLFKPQQAADQAHRCLGCGNPY--CEWKCPVHNFIPNWLKLVSEGN---- 84

Query: 78  KAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVADYAREHG 137
             +  A ++    N+LP + GRVCPQ+  CEG C +      + IG +E+++ D A   G
Sbjct: 85  --ILAAAELSHQTNTLPEVCGRVCPQDRLCEGACTLNDGFGAVTIGSVEKYITDTAFAMG 142

Query: 138 IDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYGI 197
              +L       +K  G+RVAVIGAGPAGL CA  L + G    +F+   E GG+L +GI
Sbjct: 143 WRPDLSK-----VKPTGRRVAVIGAGPAGLGCADVLVRNGVTPVVFDRNPEIGGLLTFGI 197

Query: 198 PEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKI 257
           PEF+L K +L +  +    +G+E + +  +G+ VT+ +LL+EYDA+F+  G  T      
Sbjct: 198 PEFKLEKHVLSRRREVFTGMGIEFRLNTEIGKDVTMEQLLDEYDAVFMGMGTYTYMKGGF 257

Query: 258 PGINLNGIYSANEFL-TRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLG 316
           PG +L G++ A +FL   +N    ++    D   + GKRV+V+G G+TAMD  R+++R G
Sbjct: 258 PGEDLPGVHDALDFLIANVNRNLGFEKSAEDFVDMKGKRVVVLGGGDTAMDCNRTSIRQG 317

Query: 317 AE-VIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPL 375
           A+ V  AYRR +E+M    +EV++AKEEGVKF+F   P+  +G  E RV+ VK  + + L
Sbjct: 318 AKSVTCAYRRDEENMPGSRKEVKNAKEEGVKFLFNRQPIAIVG--EDRVEGVKVVETR-L 374

Query: 376 EERDKRGKRK---IVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDEN 432
            E D RG+R    I G+ E I  EA  V+IA G  P+   W     +     G ++    
Sbjct: 375 GEPDARGRRSPEPIPGSEEIIPAEA--VLIAFGFRPSPAPWFERFEIATDSQGRVVAPAQ 432

Query: 433 L----MTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
                 TS P +FAGGD +RG   V+ A+ +GR AA+ I +YL
Sbjct: 433 AQFKHQTSNPKIFAGGDMVRGSDLVVTAIFEGRTAAEGILDYL 475


>gb|AAB18329.1| (U73807) formate dehydrogenase beta subunit [Moorella
           thermoacetica]
           Length = 707
           
 Score =  270 bits (683), Expect = 3e-71
 Identities = 176/443 (39%), Positives = 247/443 (55%), Gaps = 41/443 (9%)

Query: 50  APCIKGCPVNIDIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEG 109
           APC+K CP ++DIP +I A+++ R        E+L +I    +L  + GRVC     CE 
Sbjct: 195 APCLKRCPAHLDIPAYIDAIKDGR------YEESLAIIRQRTALAGVLGRVCVH--PCEE 246

Query: 110 VCVVGKVGDPINIGKLERFVADYAREHGIDDELLM-----------------EEIRGIKR 152
            C  G V +P+ I  L+RFVADY  + G     +                  EE   +  
Sbjct: 247 NCRRGNVDEPLAIRGLKRFVADYEVKRGRRPVAVCGGNLFTGPWRPAGQAGGEETTAV-T 305

Query: 153 NGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYGIPEFRLPKEILRKELK 212
           +GK+VA+IGAGPAGL+ A +LA  GY+VTIFEAL   GG+LA GIP +RLP++IL  E++
Sbjct: 306 SGKKVAIIGAGPAGLSAAYQLAGRGYKVTIFEALPVAGGMLAVGIPSYRLPRDILAGEIE 365

Query: 213 KLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGIN--LNGIYSANE 270
            +K LGV I  +  VG  VT+ +L  +YDA+FI+TG      + + G +    G     +
Sbjct: 366 AIKALGVTINLNTRVGVDVTMDQLQRDYDAVFIATGLHASSRMGVAGEDEGYGGFIPGVK 425

Query: 271 FLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGA-EVIIAYRRGKED 329
           FL  +NL +         P + GK V V+G GN AMD ARSALR GA EV + YRR + +
Sbjct: 426 FLRDLNLDRC--------PSLEGKVVAVVGGGNVAMDCARSALRRGAREVHLIYRRSRAE 477

Query: 330 MTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGKRKIVGT 389
           M A   EV+ A+ EGV + F VNP   +  E+G +K ++  +MK  E  D   +R +   
Sbjct: 478 MPAHATEVRDAEAEGVIYHFLVNPTALVA-EKGNIKGMQCVRMKLGEPDDSGRRRPVPVP 536

Query: 390 GEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDE-NLMTSIPGVFAGGDAIR 448
           G    +  D V+ AIGQ  +  L      ++V + GTI VD   L TS+PGVFAGGD + 
Sbjct: 537 GTEFFLPCDIVVPAIGQAAD--LSFLDGRIEVGKRGTISVDPVTLATSVPGVFAGGDIVL 594

Query: 449 GEATVILAMGDGRKAAKAIHEYL 471
           G  TV+ A+  G +AA +I +YL
Sbjct: 595 GARTVVEAVAQGNRAAVSIDQYL 617


>pir||G82083 glutamate synthase, small subunit VC2377 [imported] - Vibrio
           cholerae (group O1 strain N16961)
           >gi|9656948|gb|AAF95520.1| (AE004308) glutamate
           synthase, small subunit [Vibrio cholerae]
           Length = 471
           
 Score =  266 bits (673), Expect = 4e-70
 Identities = 169/472 (35%), Positives = 257/472 (53%), Gaps = 31/472 (6%)

Query: 12  PERSPVE-RVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALR 70
           P + P+  R  +F E+   +T + A  +A+RCL C   Y  C   CPV+  IP +++   
Sbjct: 17  PAKKPLHIRKIEFVEIYEPFTKQQATAQADRCLDCGNPY--CEWKCPVHNYIPQWLKLAN 74

Query: 71  ENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVA 130
           E R      + EA  +    NSLP + GRVCPQ+  CEG C +      + IG +E+++ 
Sbjct: 75  EGR------ILEAADLAHQTNSLPEVCGRVCPQDRLCEGSCTLNADFGAVTIGNIEKYIT 128

Query: 131 DYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPG 190
           D A E G   ++       +    K+VA+IGAGPAGL  A  L + G    +F+   E G
Sbjct: 129 DTAFEMGWKPDM-----SNVVWTDKKVAIIGAGPAGLAAADILVRNGVRPVVFDRYPEIG 183

Query: 191 GVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAG 250
           G+L +GIP F+L K ++    +    +G+E + +  VG+ +T+ +LL+EYDA+F+  G  
Sbjct: 184 GLLTFGIPSFKLEKGVMENRRRIFSEMGIEFRLNVEVGQDITLQQLLDEYDAVFLGVGTY 243

Query: 251 TPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEY--DTPIV--VGKRVIVIGAGNTAM 306
                 +   +  G+Y A  FL    +   YK  E   + P +   GK V+V+G G+TAM
Sbjct: 244 QYMRAGLANEDAPGVYDALPFL----ISNTYKVMELNNEAPFIDMAGKNVVVLGGGDTAM 299

Query: 307 DAARSALRLGA-EVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVK 365
           D  R+++R GA  VI AYRR +E+M     EV++AKEEGV+FMF + P+    + +G+V 
Sbjct: 300 DCVRTSIRQGASRVICAYRRDEENMPGSRREVKNAKEEGVEFMFNLQPLGIEVNAQGQVT 359

Query: 366 AVKFEKMKPLEERDKRGKRK--IVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVRE 423
            VK  K   L E D  G+RK   V   E++ + AD VI+A G  P+K+ W     +++ +
Sbjct: 360 GVKVVK-TALGEPDAAGRRKPEPVAGSEHV-LPADAVIMAFGFQPHKMAWLEPFDVELDQ 417

Query: 424 DGTIIVDE----NLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
            G I           T+ P +FAGGDA+RG   V+ A+ +GRKAA+ I +YL
Sbjct: 418 WGRIKAPAKQTYQYQTTNPKIFAGGDAVRGSDLVVTAIDEGRKAAEGILDYL 469


>gb|AAG38999.1|AF192408_3 (AF192408) NADPH-dependent glutamate synthase small subunit
           precursor [Azospirillum brasilense]
           Length = 482
           
 Score =  265 bits (670), Expect = 8e-70
 Identities = 176/478 (36%), Positives = 261/478 (53%), Gaps = 27/478 (5%)

Query: 7   ERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFI 66
           +R+P  +R   ER +DF E+   ++ E A  +A RC QC   +  C   CPV+ +IP ++
Sbjct: 14  QRMPD-KRPAAERRQDFAEIYARFSDERANEQANRCSQCGVPF--CQVHCPVSNNIPDWL 70

Query: 67  RALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGK-VGDPINIGKL 125
           +   E R      + EA +V  A N+ P I GR+CPQ+  CEG CV+ +     + IG +
Sbjct: 71  KLTSEGR------LEEAYEVSQATNNFPEICGRICPQDRLCEGNCVIEQSTHGAVTIGSV 124

Query: 126 ERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEA 185
           E+++ D A + G      ++     +  G  V VIGAGPAGL  A EL   GYEV +++ 
Sbjct: 125 EKYINDTAWDQG-----WVKPRTPSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDR 179

Query: 186 LHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFI 245
               GG+L YGIP F+L K ++ + +K L   GV    +  VGR  ++PEL  ++ A+ +
Sbjct: 180 YDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGRDASLPELRRKHVAVLV 239

Query: 246 STGAGTPKLLKIPGINLNGIYSANEFLT---RINLMKAYKFPEYDTPIVVGKRVIVIGAG 302
           +TG    + +K PG  L  I +A ++LT   +++L    +  E  +    GK V+V+G G
Sbjct: 240 ATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGG 299

Query: 303 NTAMDAARSALRLGA-EVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDE- 360
           +TAMD  R+A+R GA  V   YRR +++M     EV HA+EEGV+F++   P  F GD  
Sbjct: 300 DTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIWQAAPEGFTGDTV 359

Query: 361 EGRVKAVKFEKMKPLEERDKRGKR-KIVGTGEYITVEADTVIIAIGQTPNKILWR-TTPG 418
              V+AV+      L   D  G++   V  G   TV+AD VI A+G  P  +      P 
Sbjct: 360 VTGVRAVRIH----LGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPE 415

Query: 419 LKVREDGTIIVDENL-MTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSKSA 475
           LKV   GT++VD    MT++ GVFA GD +RG + V+ A+ DGR AA+ IH Y    A
Sbjct: 416 LKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKAKA 473


>pir||H82523 glutamate synthase, beta subunit XF2709 [imported] - Xylella
           fastidiosa (strain 9a5c)
           >gi|9107954|gb|AAF85506.1|AE004077_2 (AE004077)
           glutamate synthase, beta subunit [Xylella fastidiosa]
           Length = 494
           
 Score =  264 bits (667), Expect = 2e-69
 Identities = 171/485 (35%), Positives = 256/485 (52%), Gaps = 36/485 (7%)

Query: 12  PERSPVE--RVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRAL 69
           P+R PVE     D+ E+   +    A  +A RCL C   Y  C   CPV+  IP +++ +
Sbjct: 17  PQRIPVELRTSGDWRELYGKFDKAEAQYQAGRCLDCGNPY--CSWKCPVHNAIPQWLQLV 74

Query: 70  RENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFV 129
           +ENR      + EA  +  A N LP + GRVCPQ+  CEG C + + G  + IG +E+++
Sbjct: 75  QENR------IDEAAALCHATNPLPEVCGRVCPQDRLCEGSCTLEEFG-AVTIGAVEKYI 127

Query: 130 ADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEP 189
            D A + G   +L       ++  G RVAV+GAGPAGL CA  LA+ G +  +++   + 
Sbjct: 128 VDTALQQGWRPDL-----SHVQPTGWRVAVVGAGPAGLACADRLARAGVQAVVYDRYEQI 182

Query: 190 GGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGA 249
           GG+L +GIP F+L K ++    K L+ +GVE +    +G+ + I  LLE YDA+F+  GA
Sbjct: 183 GGLLQFGIPSFKLDKAVMSTRRKVLEGMGVEFRLGVEIGKDLGIEALLEHYDAVFLGVGA 242

Query: 250 GTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFP----------EYDTPIVVGKRVIVI 299
                  +PG +L  +  A  FL +   + +   P          +   P V GK V+V+
Sbjct: 243 YRYTDGGLPGQDLKNVLPALPFLVQNGRIVSGNDPYGRPIAGWEDQVQLPDVTGKSVVVL 302

Query: 300 GAGNTAMDAARSALRLGA-EVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIG 358
           G G+T MD  RSA+RLGA +V   YRR + +M     EV +A+EEGV+F+F   P+    
Sbjct: 303 GGGDTGMDCVRSAIRLGATKVTCIYRRDEANMPGSAREVANAREEGVRFLFNRQPLSIQS 362

Query: 359 DEEGRVKAVKFEKMKPLEERDKRGKRKIVG-TGEYITVEADTVIIAIGQTPNKILWRTTP 417
             + +   V   + K L E D  G+R  V   G    +EAD VIIA G +P    W T  
Sbjct: 363 GTDKQAIGVTVVETK-LAEPDANGRRNAVPIQGTEAVLEADVVIIAFGFSPMLPEWLTAQ 421

Query: 418 GLKVREDGTIIV-------DENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEY 470
           G++   +G I+V            T+ P +FAGGD +RG   V+ A+ +GR AA++I  +
Sbjct: 422 GIQASSNGRIVVALSDTGDGLTYQTTHPKLFAGGDCVRGADLVVTAVAEGRDAAESIVRW 481

Query: 471 LSKSA 475
           L  +A
Sbjct: 482 LRATA 486


>emb|CAC11556.1| (AL445064) GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN related protein
           [Thermoplasma acidophilum]
           Length = 484
           
 Score =  259 bits (656), Expect = 4e-68
 Identities = 183/475 (38%), Positives = 262/475 (54%), Gaps = 38/475 (8%)

Query: 7   ERVPTPERSPVERVRDFNEVNL-GYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGF 65
           ERV   +  P ERV+ F+   L  YT E A+ EA RCL C      C   CP ++DI G+
Sbjct: 5   ERVRIKKADPDERVKTFDIEPLDNYTDEEAIAEASRCLGCNM----CSAACPASLDISGY 60

Query: 66  IRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKL 125
           IR+      +P + VR  ++ +      PAI GRVC     CE +CV+   G PI I  L
Sbjct: 61  IRSTAAG--DPAQTVRIIMETL----PFPAIIGRVCTH--MCEDICVMYDGGGPIAIRHL 112

Query: 126 ERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEA 185
           +R+ AD   ++G   E+L  + R  K  GK+VAVIG GPAGLT A  L+  G +VT+FE 
Sbjct: 113 KRYAADKFDDYG---EILRPQKR--KFIGKKVAVIGGGPAGLTVAYYLSLQGVKVTLFEE 167

Query: 186 LHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFI 245
               GG +  GIP +RLP+ +L KE+  +   GV++K +  VGR ++  ++++EYDA+F+
Sbjct: 168 RPALGGFMKTGIPRYRLPQSVLDKEIGYVVSRGVDVKLNTKVGRDISFDQIMKEYDAVFL 227

Query: 246 STGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTA 305
             G   P++   PG +   +  A EFL R++         +   I VG  V VIG G TA
Sbjct: 228 GVGNHKPRMTGTPGSDAPNVMHATEFLERVS---------FGERIDVGDTVAVIGGGFTA 278

Query: 306 MDAARSALRLGAE-VIIAYRR------GKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIG 358
            D+AR++LRLGA+ V I YRR      G   M A  EE+  A+EE V++++ V P E++ 
Sbjct: 279 NDSARTSLRLGAKHVYIMYRRRDVDRPGYPSMNAD-EEMDEAEEEKVEYVWEVTPFEYV- 336

Query: 359 DEEGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQ-TPNKILWRTTP 417
            E GRV A+K+   + ++E   R K   +    Y T++ D VI A GQ T    L     
Sbjct: 337 KENGRVVAMKYWMNEMVKEGKGRAKPVPIKDKVY-TIKVDMVIEATGQETDYSFLGDYVK 395

Query: 418 GLKVREDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLS 472
            L++   G  IVD+N MTSI GVF+GGD+      +I A+ DG  A + I +YL+
Sbjct: 396 KLRLNPHGEPIVDQNGMTSIEGVFSGGDSTNPNRDLISAVRDGDIAVQGILKYLN 450


>sp|Q05756|GLTD_AZOBR GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN (GLUTAMATE SYNTHASE BETA
           SUBUNIT) (NADPH-GOGAT) (GLTS BETA CHAIN)
           >gi|420793|pir||A46602 glutamate synthase (NADPH) (EC
           1.4.1.13) beta chain [validated] - Azospirillum
           brasilense
           Length = 481
           
 Score =  256 bits (647), Expect = 4e-67
 Identities = 171/468 (36%), Positives = 256/468 (54%), Gaps = 27/468 (5%)

Query: 7   ERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFI 66
           +R+P  +R   ER +DF E+   ++ E A  +A RC QC   +  C   CPV+ +IP ++
Sbjct: 14  QRMPD-KRPAAERRQDFAEIYARFSDERANEQANRCSQCGVPF--CQVHCPVSNNIPDWL 70

Query: 67  RALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGK-VGDPINIGKL 125
           +   E R      + EA +V  A N+ P I GR+CPQ+  CEG CV+ +     + IG +
Sbjct: 71  KLTSEGR------LEEAYEVSQATNNFPEICGRICPQDRLCEGNCVIEQSTHGAVTIGSV 124

Query: 126 ERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEA 185
           E+++ D A + G      ++     +  G  V VIGAGPAGL  A EL   GYEV +++ 
Sbjct: 125 EKYINDTAWDQG-----WVKPRTPSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDR 179

Query: 186 LHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFI 245
               GG+L YGIP F+L K ++ + +K L   GV    +  VGR  ++PEL  ++ A+ +
Sbjct: 180 YDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGRDASLPELRRKHVAVLV 239

Query: 246 STGAGTPKLLKIPGINLNGIYSANEFLT---RINLMKAYKFPEYDTPIVVGKRVIVIGAG 302
           +TG    + +K PG  L  I +A ++LT   +++L    +  E  +    GK V+V+G G
Sbjct: 240 ATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGG 299

Query: 303 NTAMDAARSALRLGA-EVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDE- 360
           +TAMD  R+A+R GA  V   YRR +++M     EV HA+EEGV+F++   P  F GD  
Sbjct: 300 DTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIWQAAPEGFTGDTV 359

Query: 361 EGRVKAVKFEKMKPLEERDKRGKR-KIVGTGEYITVEADTVIIAIGQTPNKILWR-TTPG 418
              V+AV+      L   D  G++   V  G   TV+AD VI A+G  P  +      P 
Sbjct: 360 VTGVRAVRIH----LGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPE 415

Query: 419 LKVREDGTIIVDENL-MTSIPGVFAGGDAIRGEATVILAMGDGRKAAK 465
           LKV   GT++VD    MT++ GVFA GD +RG + V+ A+ DGR A +
Sbjct: 416 LKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAGR 463


>sp|Q46820|YGFT_ECOLI HYPOTHETICAL 69.1 KD PROTEIN IN KDUI-LYSS INTERGENIC REGION
           Length = 639
           
 Score =  255 bits (644), Expect = 9e-67
 Identities = 164/468 (35%), Positives = 243/468 (51%), Gaps = 19/468 (4%)

Query: 5   IKERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPG 64
           +  R    + S  ER   F E+  G   + A  E++RC+ C  E A C   CP++  IP 
Sbjct: 173 VNSRKGADKISASERKTHFGEIYCGLDPQQATYESDRCVYCA-EKANCNWHCPLHNAIPD 231

Query: 65  FIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGK 124
           +IR ++E +      + EA ++    +SLP I GRVCPQ+  CEG C +      ++IG 
Sbjct: 232 YIRLVQEGK------IIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKDHSGAVSIGN 285

Query: 125 LERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFE 184
           LER++ D A   G        ++  +    ++VAVIGAGPAGL CA  LA+ G +V +F+
Sbjct: 286 LERYITDTALAMG-----WRPDVSKVVPRSEKVAVIGAGPAGLGCADILARAGVQVDVFD 340

Query: 185 ALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIF 244
              E GG+L +GIP F+L K +L +  +    +G++   +  +GR +T  +L  EYDA+F
Sbjct: 341 RHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDITFSDLTSEYDAVF 400

Query: 245 ISTGAGTPKLLKIPGINLNGIYSANEFLT--RINLMKAYKFPEYDTPIVVGKRVIVIGAG 302
           I  G        +P  +  G+  A  FLT     LM   +  EY    V GKRV+V+G G
Sbjct: 401 IGVGTYGMMRADLPHEDAPGVIQALPFLTAHTRQLMGLPESEEYPLTDVEGKRVVVLGGG 460

Query: 303 NTAMDAARSALRL-GAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEE 361
           +T MD  R+++RL  A V  AYRR +  M    +EV +A+EEGV+F F V P     DE+
Sbjct: 461 DTTMDCLRTSIRLNAASVTCAYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDED 520

Query: 362 GRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKV 421
           GR+ AV   +    E      +R     G    + AD +I+A G   + + W    G+K+
Sbjct: 521 GRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQAHAMPWLQGSGIKL 580

Query: 422 REDGTIIVDE----NLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAK 465
            + G I   +       T +  VFAGGDA+ G   V+ AM  GR+AA+
Sbjct: 581 DKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAAR 628


>pir||G65072 hypothetical protein b2887 - Escherichia coli (strain K-12)
           >gi|887837|gb|AAA83068.1| (U28375) ORF_f644 [Escherichia
           coli] >gi|1789253|gb|AAC75925.1| (AE000372) putative
           oxidoreductase, Fe-S subunit [Escherichia coli K12]
           Length = 644
           
 Score =  255 bits (644), Expect = 9e-67
 Identities = 164/468 (35%), Positives = 243/468 (51%), Gaps = 19/468 (4%)

Query: 5   IKERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPG 64
           +  R    + S  ER   F E+  G   + A  E++RC+ C  E A C   CP++  IP 
Sbjct: 178 VNSRKGADKISASERKTHFGEIYCGLDPQQATYESDRCVYCA-EKANCNWHCPLHNAIPD 236

Query: 65  FIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGK 124
           +IR ++E +      + EA ++    +SLP I GRVCPQ+  CEG C +      ++IG 
Sbjct: 237 YIRLVQEGK------IIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKDHSGAVSIGN 290

Query: 125 LERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFE 184
           LER++ D A   G        ++  +    ++VAVIGAGPAGL CA  LA+ G +V +F+
Sbjct: 291 LERYITDTALAMG-----WRPDVSKVVPRSEKVAVIGAGPAGLGCADILARAGVQVDVFD 345

Query: 185 ALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIF 244
              E GG+L +GIP F+L K +L +  +    +G++   +  +GR +T  +L  EYDA+F
Sbjct: 346 RHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDITFSDLTSEYDAVF 405

Query: 245 ISTGAGTPKLLKIPGINLNGIYSANEFLT--RINLMKAYKFPEYDTPIVVGKRVIVIGAG 302
           I  G        +P  +  G+  A  FLT     LM   +  EY    V GKRV+V+G G
Sbjct: 406 IGVGTYGMMRADLPHEDAPGVIQALPFLTAHTRQLMGLPESEEYPLTDVEGKRVVVLGGG 465

Query: 303 NTAMDAARSALRL-GAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEE 361
           +T MD  R+++RL  A V  AYRR +  M    +EV +A+EEGV+F F V P     DE+
Sbjct: 466 DTTMDCLRTSIRLNAASVTCAYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDED 525

Query: 362 GRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKV 421
           GR+ AV   +    E      +R     G    + AD +I+A G   + + W    G+K+
Sbjct: 526 GRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQAHAMPWLQGSGIKL 585

Query: 422 REDGTIIVDE----NLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAK 465
            + G I   +       T +  VFAGGDA+ G   V+ AM  GR+AA+
Sbjct: 586 DKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAAR 633


>gb|AAD56915.1|AF180145_7 (AF180145) glutamate synthase small subunit gltS [Zymomonas
           mobilis]
           Length = 490
           
 Score =  249 bits (628), Expect = 7e-65
 Identities = 172/479 (35%), Positives = 265/479 (54%), Gaps = 31/479 (6%)

Query: 5   IKERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPG 64
           +K+  P  +RS  ER +DFNE+   ++ E A  +A RC QC   Y  C   CP++ +IP 
Sbjct: 12  LKQAYPE-KRSAQERDKDFNEIYRSFSDEQASCQASRCSQCGVPY--CSAYCPLHNNIPD 68

Query: 65  FIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGD-PINIG 123
           +++   E R      +++A  +  A +++P I GR+CPQ+  CEG CV+   G   + IG
Sbjct: 69  WLKMTAEGR------LQDAYALSSATSTMPEICGRICPQDRLCEGNCVIENSGHGAVTIG 122

Query: 124 KLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIF 183
            +E+++ D A + G      +E ++ I   G  V +IG+GPAGLT A +L + GY+V ++
Sbjct: 123 SVEKYITDTAWKEG-----WVEPLQPITELGISVGIIGSGPAGLTAAEKLRQQGYQVHVY 177

Query: 184 EALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLE--EYD 241
           +     GG+L Y IP FRL K+I+ + +K+L   G  +   +   R V +P L     + 
Sbjct: 178 DRHVRAGGLLTYCIPGFRLDKDIVARRVKRLADWGCHL--PYQFARRVKMPALKNCVTHA 235

Query: 242 AIFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAY--KFPEYD--TPIVVGKRVI 297
           AI I+TG    + L  PG  LNGI  A +FL   N  K++  K   +D  T    GK+V+
Sbjct: 236 AILIATGVYKARGLATPGKELNGIVDALDFLISSN-RKSFGDKVEAFDNGTLDAKGKKVV 294

Query: 298 VIGAGNTAMDAARSALRLGAE-VIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEF 356
           VIG G+TAMD  R+A+R GAE V   YRR + +M     EV++A++EG +F++   P  F
Sbjct: 295 VIGGGDTAMDCVRTAIRQGAESVRCLYRRDRVNMPGSAREVKNAEDEGAEFVWLSAPESF 354

Query: 357 IGDEEGRVKAVKFEKMKPLEERDKRGKRK-IVGTGEYITVEADTVIIAIGQTPNKI-LWR 414
           +G +   V++VK   M+ L   D  G+R           ++AD VI A+G +P  +    
Sbjct: 355 VGKD--HVQSVKVRGMR-LGAPDGSGRRSPEPDPARLFDMDADLVICALGFSPEDLPTLF 411

Query: 415 TTPGLKVREDGTIIVDE-NLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLS 472
             P L V   GT+  D   L TSI GVFA GD +RG + V+ A+ DG  A++ +H++L+
Sbjct: 412 NAPELSVTPWGTVEADPVTLQTSIEGVFAAGDIVRGASLVVWAIRDGLVASEQMHQWLA 470


>pir||G72281 glutamate synthase, beta subunit - Thermotoga maritima  (strain
           MSB8) >gi|4981770|gb|AAD36292.1|AE001778_13 (AE001778)
           glutamate synthase, beta subunit [Thermotoga maritima]
           Length = 618
           
 Score =  240 bits (606), Expect = 3e-62
 Identities = 168/479 (35%), Positives = 257/479 (53%), Gaps = 39/479 (8%)

Query: 7   ERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFI 66
           ER+  P   P  R++ F E+  GY+ E A++EA RC++C      C   CP ++DIP +I
Sbjct: 165 ERIEMPVEPPEVRIKSFIEIVKGYSREQAMQEAARCVEC----GVCTYTCPEHMDIPQYI 220

Query: 67  RALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLE 126
           +++ E+       + E L+ ++  N L  + GRVC    +CE  C VG  G+P+ I  L+
Sbjct: 221 KSVYEDN------LEEGLRWLYRTNPLSMVCGRVCTH--RCETACSVGVRGEPVAIQWLK 272

Query: 127 RFVADYA--REHGIDDELLMEEIRGIK--RNGKRVAVIGAGPAGLTCAAELAKMGYEVTI 182
           R++ D      +G        EI  IK  R GK V +IG+GPAGL  A  LA MGY+VTI
Sbjct: 273 RYIVDSIPLERYG--------EILDIKPERKGKSVGIIGSGPAGLAAAYFLATMGYDVTI 324

Query: 183 FEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDA 242
           +E+  +PGGV+ YGIP++RLP E L K++  ++ LGV+I  +  V + V+  ++ + +D 
Sbjct: 325 YESESKPGGVMRYGIPKYRLPDEALDKDIAFIEALGVKILLNTRVVQDVSFEDVRKRHDV 384

Query: 243 IFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAG 302
           +F++TG G  +   +PG +   +  A   L  + +++ Y   +   P  V +R++VIG G
Sbjct: 385 VFLATGFGLGRSTGVPGTDHPDVKQA---LPLLKMIRDYLRGDGPKP-PVPERLVVIGGG 440

Query: 303 NTAMDAARSALRLG-------AEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVE 355
           N AMD +RS  RL           +++     EDM A +EE++ A EEG+       P+E
Sbjct: 441 NVAMDISRSMARLQFMEYGRVNVQVLSLEGCFEDMPADMEEIEEALEEGIVINPGWGPME 500

Query: 356 FIGDEEGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRT 415
            +  E  R+K VKF+K   + + + R   +     E I VEAD V+ AIGQ P+      
Sbjct: 501 VV-IENDRIKGVKFKKCVSVFDGEGRFNPQF-DEKEQIFVEADMVVEAIGQAPDYSYLPE 558

Query: 416 TPGLKVR-EDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSK 473
               K+    G I  +E   TS+  +FAGGD + G   +I  + DG  AAK I  YL K
Sbjct: 559 EIRSKLEFFRGRIKTNEYNQTSVEWLFAGGDIVHG-PDIIHGIADGYAAAKGIDMYLRK 616


>pir||G83590 probable oxidoreductase PA0440 [imported] - Pseudomonas aeruginosa
           (strain PAO1) >gi|9946298|gb|AAG03829.1|AE004481_5
           (AE004481) probable oxidoreductase [Pseudomonas
           aeruginosa]
           Length = 455
           
 Score =  239 bits (604), Expect = 5e-62
 Identities = 158/443 (35%), Positives = 235/443 (52%), Gaps = 34/443 (7%)

Query: 35  ALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDNPRKAVREALKVIWACNSLP 94
           A  E+ RCL C    APC+  CP  IDIPGFIR++ +        V+ A + I + N L 
Sbjct: 34  AALESARCLYCYD--APCVNACPTEIDIPGFIRSIAQEN------VQGAAQKILSANILG 85

Query: 95  AITGRVCPQEDQCEGVCVVGKVGD--PINIGKLERFVADYAREHGIDDELLMEEIRGIKR 152
               RVCP E  C+  CV     +  P+ IG+L+R+  D+A   G D+       +    
Sbjct: 86  GSCARVCPTEILCQRACVRNNAQECAPVLIGQLQRYALDHA---GFDEH----PFKRSPA 138

Query: 153 NGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYGIPEFRLPKEILRKELK 212
            GKR+AV+GAGPAGL+CA  LA  G++V +FEA  + GG+  YGI  ++L  +  R+E++
Sbjct: 139 TGKRIAVVGAGPAGLSCAHRLAMHGHDVVLFEARTKAGGLNEYGIARYKLVDDFARREVE 198

Query: 213 -KLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSANEF 271
             L+  G+E++    +G  + +  L +EYDA+F+  G    K L +   +  G+ +A ++
Sbjct: 199 FLLQIGGIELRHGQRLGDNLALGALHDEYDAVFLGIGLAASKRLGLEDEDAPGLLAATDY 258

Query: 272 LTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGA-EVIIAYRRGKEDM 330
           +  +           D P  V  R IVIGAGNTA+D A    RLGA +V + YRRG E+M
Sbjct: 259 IRELRQSDDL----LDLP--VADRCIVIGAGNTAIDMAVQMSRLGARDVNLVYRRGFEEM 312

Query: 331 TARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGKRKIVGTG 390
            A   E + AK   V+ + +  P   + DE GRV+ ++F        R +    ++  TG
Sbjct: 313 GATGHEQEIAKASQVRLLTWARPERVLLDEHGRVRGMRF-------ARTRLENGRLGDTG 365

Query: 391 EYITVEADTVIIAIGQTPNKILWRTTPGLKVREDG-TIIVDENLMTSIPGVFAGGDAIR- 448
           E+  + AD +  AIGQ             ++R DG  I VD  + TSIPG++AGGD +  
Sbjct: 366 EHFELAADAIFKAIGQAFEGASLGDPLAAQLRRDGERIQVDGQMRTSIPGIYAGGDCVAL 425

Query: 449 GEATVILAMGDGRKAAKAIHEYL 471
           GE   + A+  G+ AA+AIH  L
Sbjct: 426 GEDLTVQAVQHGKLAAEAIHAQL 448


>gb|AAB46944.1| (L34011) Fe-S center and glutamate synthase (GltD) protein
           [Escherichia coli]
           Length = 652
           
 Score =  239 bits (603), Expect = 6e-62
 Identities = 147/419 (35%), Positives = 229/419 (54%), Gaps = 18/419 (4%)

Query: 12  PERSPVE-RVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALR 70
           P++  +E R   F+E+ L +  + A REA RCL+C  E++ C   CP++  IP +I  ++
Sbjct: 196 PDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCG-EHSVCEWTCPLHNHIPQWIELVK 254

Query: 71  ENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVA 130
                    +  A+++    N+LP ITGRVCPQ+  CEG C +      + IG +ER+++
Sbjct: 255 AGN------IDAAVELSHQTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTIGNIERYIS 308

Query: 131 DYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPG 190
           D A   G   +L       + +  KRVA+IGAGPAGL CA  L + G  VT+++   E G
Sbjct: 309 DQALAKGWRPDL-----SHVTKVDKRVAIIGAGPAGLACADVLTRNGVGVTVYDRHPEIG 363

Query: 191 GVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAG 250
           G+L +GIP F+L K +L +  +    +G+  + +  VG+ V++  LLE+YDA+F+  G  
Sbjct: 364 GLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVGKDVSLDSLLEQYDAVFVGVGTY 423

Query: 251 TPKLLKIPGINLNGIYSANEFL--TRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDA 308
                 +P  +  G+Y A  FL      +M   + PE       G  V+V+G G+TAMD 
Sbjct: 424 RSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAMDC 483

Query: 309 ARSALRLGA-EVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAV 367
            R+A R GA  V  AYRR + +M    +E ++A+EEG  F F V PV    +E+G V  +
Sbjct: 484 VRTARRHGASNVTCAYRRDEANMPGSKKEAKNAREEGANFEFNVQPVALELNEQGHVCGI 543

Query: 368 KFEKMKPLEERDKRGKRKIVGT-GEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDG 425
           +F + + L E D +G+R+ V   G    + AD VI+A G  P+ + W  + G+ V + G
Sbjct: 544 RFLRTR-LGEPDAQGRRRPVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWG 601


>gb|AAD18034.1| (AF119099) glutamate synthase small subunit [Pseudomonas
           fluorescens]
           Length = 437
           
 Score =  238 bits (602), Expect = 8e-62
 Identities = 148/419 (35%), Positives = 231/419 (54%), Gaps = 23/419 (5%)

Query: 18  ERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDNPR 77
           +R ++F E+   +  + +  +A RCL C   Y  C   CPV+  IP +++ + E      
Sbjct: 26  QRKKEFVEIYEPFKPQQSADQAHRCLGCGNPY--CEWKCPVHNFIPNWLKLVAEGN---- 79

Query: 78  KAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVADYAREHG 137
             + +A ++    N+LP + GRVCPQ+  CEG C +      + IG +E+++ D A   G
Sbjct: 80  --ILQAAELSHQTNTLPEVCGRVCPQDRLCEGACTLNDGFGAVTIGSVEKYITDTAFAMG 137

Query: 138 IDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYGI 197
                   ++  +K  GKRVA+IGAGPAGL CA  L + G    +F+   E GG+L +GI
Sbjct: 138 -----WRPDMSKVKPTGKRVAIIGAGPAGLGCADVLVRGGVTPVVFDKNPEIGGLLTFGI 192

Query: 198 PEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKI 257
           PEF+L K +L    +    +G+E + +  VG+ VT+ +LLEEYDA+F+  G  T      
Sbjct: 193 PEFKLEKTVLSNRREVFTGMGIEFRLNTEVGKDVTMEQLLEEYDAVFMGMGTYTYMKGGF 252

Query: 258 PGINLNGIYSANEFL-TRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLG 316
            G +L G+Y A +FL   +N    ++    D   + GK+V+V+G G+TAMD  R+++R G
Sbjct: 253 AGEDLPGVYDALDFLIANVNRNLGFEKSPEDFVDMKGKKVVVLGGGDTAMDCNRTSIRQG 312

Query: 317 AE-VIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPL 375
           A+ V  AYRR + +M    +EV++AKEEGVKF++   P+  +G  E +V+ VK  + + L
Sbjct: 313 AKSVTCAYRRDEANMPGSRKEVKNAKEEGVKFLYNRQPIAIVG--EDKVEGVKVVETR-L 369

Query: 376 EERDKRGKRK---IVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDE 431
            E D RG+R    I G+ E I   AD V+IA G  P+   W     ++    G ++  E
Sbjct: 370 GEPDARGRRSPEPIPGSEEII--PADAVVIAFGFRPSPAPWFEQFSIQTDSQGRVVAPE 426


>pir||B29617 glutamate synthase (NADPH) (EC 1.4.1.13) small chain - Escherichia
           coli >gi|146209|gb|AAA23905.1| (M18747) glutamate
           synthase small subunit [Escherichia coli]
           Length = 471
           
 Score =  230 bits (580), Expect = 3e-59
 Identities = 156/475 (32%), Positives = 242/475 (50%), Gaps = 27/475 (5%)

Query: 7   ERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFI 66
           +RV  P++    R  +F E+   ++     R      +    Y  C   CPV+  IP ++
Sbjct: 12  QRVDPPKKPLKIRKIEFVEIYEPFSEARPKRRLTAACRAANPY--CEWKCPVHNYIPNWL 69

Query: 67  RALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLE 126
           +   E R      + EA ++    N+LP + GRVCPQ+  CEG C +      + IG ++
Sbjct: 70  KLANEGR------IFEAAELSHQTNTLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIGNIK 123

Query: 127 RFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEAL 186
           R++ D A E G        ++ G+K+ GK+VA+IGAGPAGL CA  L + G +   F+  
Sbjct: 124 RYINDKAFEMG-----WRPDMSGVKQTGKKVAIIGAGPAGLACADVLTRNGVKAVCFDRH 178

Query: 187 HEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFIS 246
            E GG+L +GIP F+L KE++ +  +    +G+E K +  VGR V + +LL +YDA+F+ 
Sbjct: 179 PEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDVQLDDLLSDYDAVFLG 238

Query: 247 TGAGTPKLLKIPGINLNGIYS--ANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNT 304
            G        +   + +G      +   T  +LM   +  +     + GKRV+V+G G+T
Sbjct: 239 VGTYQSMRGGLENEDADGCTQRCRSSSPTPNSLMGFGETRDEPFVSMEGKRVVVLGGGDT 298

Query: 305 AMDAARSALRLGA-EVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGR 363
           AMD  R+++R GA +V  AYRR +E+M     EV++A+EEGV+F F V P+    +  G+
Sbjct: 299 AMDCVRTSVRQGANDVTCAYRRDEENMPGSRREVKNAREEGVEFKFNVQPLGIEVNGNGK 358

Query: 364 VKAVKF---EKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLK 420
           V  VK    E  +P  +   RG R    T  Y T         +   P+ + W     ++
Sbjct: 359 VSGVKMVRTEMGEPDAKASPRGDRCRFRT--YRTGRCGD--HGVWFRPHNMEWLAKHSVE 414

Query: 421 VREDGTIIV----DENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
           +   G II     D    TS P +FAGGD +RG   V+ A+ +GRKAA  I  +L
Sbjct: 415 LDSQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRKAADGIMNWL 469


>pir||G70655 probable small subunit of NADH-dependent glutamate synthase -
           Mycobacterium tuberculosis (strain H37RV)
           >gi|1781098|emb|CAB06232.1| (Z83864) gltD [Mycobacterium
           tuberculosis]
           Length = 488
           
 Score =  224 bits (564), Expect = 2e-57
 Identities = 160/481 (33%), Positives = 248/481 (51%), Gaps = 39/481 (8%)

Query: 12  PERSPVE-RVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALR 70
           P+R PV  R+RD+ EV   +  E   ++A RC+ C   +  C  GCP+   IP +   +R
Sbjct: 16  PKRRPVPLRLRDWREVYEEFDNESLRQQATRCMDCGIPF--CHNGCPLGNLIPEWNDLVR 73

Query: 71  ENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVA 130
             R       R+A++ + A N+ P  TGR+CP    CE  CV+G   DP+ I ++E  + 
Sbjct: 74  RGR------WRDAIERLHATNNFPDFTGRLCPAP--CEPACVLGINQDPVTIKQIELEII 125

Query: 131 DYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPG 190
           D A + G      ++     K  G+ VAV+G+GPAGL  A +L + G+ VT+FE     G
Sbjct: 126 DKAFDEG-----WVQPRPPRKLTGQTVAVVGSGPAGLAAAQQLTRAGHTVTVFEREDRIG 180

Query: 191 GVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAG 250
           G+L YGIPEF++ K  L + L +++  G E +    VG  ++  +L  ++DA+ ++ GA 
Sbjct: 181 GLLRYGIPEFKMEKRHLDRRLDQMRSEGTEFRPGVNVGVDISAEKLRADFDAVVLAGGAT 240

Query: 251 TPKLLKIPGINLNGIYSANEFLTRINLMKAYK--FPEYDTPIVV--GKRVIVIGAGNTAM 306
             + L IPG  L G++ A EFL   N ++       E   P +   GK+V++IG G+T  
Sbjct: 241 AWRELPIPGRELEGVHQAMEFLPWANRVQEGDDVLDEDGQPPITAKGKKVVIIGGGDTGA 300

Query: 307 DAARSALRLGAEVIIAYRRGKEDMTARIE-----------EVQHAKEEGVKFMFFVNPVE 355
           D   +  R GA  +  +        AR E            V  A EEG + +F VN   
Sbjct: 301 DCLGTVHRQGAIAVHQFEIMPRPPDARAESTPWPTYPLMYRVSAAHEEGGERVFSVNTEA 360

Query: 356 FIGDEEGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQT-PNKILWR 414
           F+G  +GRV A++  ++  L+     GK   V  G    +EAD V++A+G   P +    
Sbjct: 361 FVG-TDGRVSALRAHEVTMLD-----GKFVKV-EGSDFELEADLVLLAMGFVGPERAGLL 413

Query: 415 TTPGLKVREDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSKS 474
           T  G+K  E G +   ++  TS+PGVF  GD  RG++ ++ A+ +GR AA A+  YL  S
Sbjct: 414 TDLGVKFTERGNVARGDDFDTSVPGVFVAGDMGRGQSLIVWAIAEGRAAAAAVDRYLMGS 473

Query: 475 A 475
           +
Sbjct: 474 S 474


>pir||T34868 probable glutamate synthase small chain - Streptomyces coelicolor
           >gi|5738513|emb|CAB52860.1| (AL109849) putative
           glutamate synthase small subunit [Streptomyces
           coelicolor A3(2)]
           Length = 487
           
 Score =  219 bits (552), Expect = 6e-56
 Identities = 154/470 (32%), Positives = 242/470 (50%), Gaps = 37/470 (7%)

Query: 18  ERVRDFNEVNL-GYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDNP 76
           ERV+D+NEV + G    +  ++A RC+ C   +  C  GCP+   IP +      N    
Sbjct: 22  ERVKDWNEVYVPGSLLPIISKQASRCMDCGIPF--CHNGCPLGNLIPEW------NDYAY 73

Query: 77  RKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVADYAREH 136
           R+    A + + A N+ P  TGR+CP    CE  CV+G    P+ I  +E  + D A E 
Sbjct: 74  REDWSAASERLHATNNFPEFTGRLCPAP--CESACVLGINQPPVTIKNVEVSIIDKAWET 131

Query: 137 GIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYG 196
           G     + E +     +GK VAVIG+GPAGL  A +L + G+ V ++E     GG+L YG
Sbjct: 132 GDVAPRIPERL-----SGKTVAVIGSGPAGLAAAQQLTRAGHTVAVYERADRVGGLLRYG 186

Query: 197 IPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLK 256
           IPEF++ K  + + +++++  G   +T   +GR +   +L + YDA+ I+ G+ T + L 
Sbjct: 187 IPEFKMEKRHINRRIEQMRAEGTRFRTGVEIGRDLKATDLKKRYDAVVIAAGSTTARDLP 246

Query: 257 IPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVV--GKRVIVIGAGNTAMDAARSALR 314
           +PG  LNGI+ A E+L   N ++     +Y  P +   GK V+VIG G+T  D   +A R
Sbjct: 247 VPGRELNGIHQAMEYLPLANKVQE---GDYVAPPITAEGKHVVVIGGGDTGADCVGTAHR 303

Query: 315 LGA----EVIIAYRRGKEDMTAR--------IEEVQHAKEEGVKFMFFVNPVEFIGDEEG 362
            GA    ++ I  R G+E    R        + +V  A EEG + ++ V+   F GDE+G
Sbjct: 304 QGAASVTQLEIMPRPGEERDAVRQPWPTFPMLYKVTSAHEEGGERVYAVSTTHFEGDEDG 363

Query: 363 RVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVR 422
               V++  M  +E  D +   K  GT   I  +  T+ +    T          GL++ 
Sbjct: 364 N---VQWLHMSEVEFVDGKLTSK-PGTERKIPAQLVTLAMGFTGTDKDNGLVDQFGLELD 419

Query: 423 EDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLS 472
           E G I  D +  T++PGVF  GDA RG++ ++ A+ +GR AA+    +L+
Sbjct: 420 ERGNIARDADFQTNVPGVFVAGDAGRGQSLIVWAIAEGRSAARGADRFLT 469


>pir||JE0142 glutamate synthase (EC 1.4.1.-) small chain - Rhodobacter
           sphaeroides
           Length = 413
           
 Score =  219 bits (551), Expect = 8e-56
 Identities = 140/387 (36%), Positives = 219/387 (56%), Gaps = 17/387 (4%)

Query: 96  ITGRVCPQEDQCEGVCVVGKVGD-PINIGKLERFVADYAREHGIDDELLMEEIRGIKRNG 154
           I GR+CPQ+ +CEG CV+ + G   + IG +E+++ D A E+G      +   +      
Sbjct: 32  ICGRICPQDRKCEGNCVIEQSGHGTVTIGAVEKYITDTAWENG-----WVVPGKPAYERS 86

Query: 155 KRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYGIPEFRLPKEILRKELKKL 214
           + V +IGAGP GL  A  L + G +VT+++     GG+L YGIP F+L K+++ + +++L
Sbjct: 87  ESVGIIGAGPGGLAAADALRRAGLQVTVYDRYDRAGGLLTYGIPGFKLEKDVVARRVEQL 146

Query: 215 KFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSANEFLTR 274
           +  GV+   +  VG  ++   +  ++DA+ I+TG    + L  PG+   G+  A  +LT 
Sbjct: 147 EQAGVQFVLNCNVGEDLSFDAIRGQHDAVLIATGVYKQRDLAAPGVGSAGVVQALSYLTA 206

Query: 275 INLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGA-EVIIAYRRGKEDMTAR 333
            N        + D     GKRV+VIG G+TAMD  R+A+R GA  V   YRR + +M   
Sbjct: 207 SNRRSFGDEVDDDGLDASGKRVVVIGGGDTAMDCVRTAIRQGATSVKCLYRRDRANMPGS 266

Query: 334 IEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGKR--KIVGTGE 391
             EV +A+EEGV+F++   P  FI  +   V+ V  +KM+ L E D  G++  +I+   +
Sbjct: 267 QREVANAEEEGVEFVWLSAPRGFIAGD--AVEGVIVQKMR-LGEPDATGRQMPEIIEGAD 323

Query: 392 YITVEADTVIIAIGQTPNKI--LWRTTPGLKVREDGTIIVD-ENLMTSIPGVFAGGDAIR 448
           Y+   AD  I+A+G  P  +  LW   P L V   GTI  D     TS+PGV+A GD +R
Sbjct: 324 YVE-PADLAIMALGFEPEDLPTLW-GVPDLTVTRWGTIKADFRTHATSLPGVYAVGDIVR 381

Query: 449 GEATVILAMGDGRKAAKAIHEYLSKSA 475
           G + V+ A+ DGR AA++I +YL++ A
Sbjct: 382 GASLVVWAIRDGRDAAQSILDYLAQPA 408


>emb|CAA73084.1| (Y12481) glutamine--pyruvate aminotransferase [Rhodobacter
           sphaeroides]
           Length = 413
           
 Score =  218 bits (550), Expect = 1e-55
 Identities = 144/418 (34%), Positives = 228/418 (54%), Gaps = 25/418 (5%)

Query: 65  FIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGD-PINIG 123
           F++  RE  +   +++R              I GR+CPQ+  CEG CV+ + G   + IG
Sbjct: 9   FVKMARETPEKRPRSLRS--------QDFHEICGRICPQDRLCEGNCVIEQSGHGTVTIG 60

Query: 124 KLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIF 183
            +E+++ D A E+G      +   +      + V +IGAGP GL  A  L + G +VT++
Sbjct: 61  AVEKYITDTAWENG-----WVVPGKPAYERSESVGIIGAGPGGLAAADALRRAGLQVTVY 115

Query: 184 EALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAI 243
           +     GG+L YGIP F+L K+++ + +++L+  GV+   +  VG  ++   +  ++DA+
Sbjct: 116 DRYDRAGGLLTYGIPGFKLEKDVVARRVEQLEQAGVQFVLNCNVGEDLSFDAIRGQHDAV 175

Query: 244 FISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGN 303
            I+TG    + L  PG+   G+  A  +LT  N        + D     GKRV+VIG G+
Sbjct: 176 LIATGVYKQRDLAAPGVGSAGVVQALSYLTASNRRSFGDEVDDDGLDASGKRVVVIGGGD 235

Query: 304 TAMDAARSALRLGA-EVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEG 362
           TAMD  R+A+R GA  V   YRR + +M     EV +A+EEGV+F++   P  FI  +  
Sbjct: 236 TAMDCVRTAIRQGATSVKCLYRRDRANMPGSQREVANAEEEGVEFVWLSAPRGFIAGD-- 293

Query: 363 RVKAVKFEKMKPLEERDKRGKR--KIVGTGEYITVEADTVIIAIGQTPNKI--LWRTTPG 418
            V+ V  +KM+ L E D  G++  +I+   +Y+   AD  I+A+G  P  +  LW   P 
Sbjct: 294 AVEGVIVQKMR-LGEPDATGRQMPEIIEGADYVE-PADLAIMALGFEPEDLPTLW-GVPD 350

Query: 419 LKVREDGTIIVD-ENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSKSA 475
           L V   GTI  D     TS+PGV+A GD +RG + V+ A+ DGR AA++I +YL++ A
Sbjct: 351 LTVTRWGTIKADFRTHATSLPGVYAVGDIVRGASLVVWAIRDGRDAAQSILDYLAQPA 408


>gb|AAC17982.1| (AF031406) NADPH dependent glutamate synthase small subunit
           homolog838 [Rhodobacter capsulatus]
           Length = 443
           
 Score =  213 bits (537), Expect = 3e-54
 Identities = 154/437 (35%), Positives = 218/437 (49%), Gaps = 40/437 (9%)

Query: 39  AERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITG 98
           A RC  C +  APC   CP +ID+P FIR +      P  A R  L      N +  +  
Sbjct: 40  AARCYFCAE--APCTTACPSDIDVPLFIRQILTG--TPEAAARTILSQ----NIMGGMCA 91

Query: 99  RVCPQEDQCEGVCV-VGKVGDPINIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRV 157
           RVCP E  CEG CV     G P+ IG L+RF  D  +  G+             R  K V
Sbjct: 92  RVCPTETLCEGACVREAAEGMPVEIGALQRFATDRLQAAGV------HPFTRAPRTEKSV 145

Query: 158 AVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYGIPEFRLPKEILRKELK-KLKF 216
           AV+GAGPAGL CA  LA +G+EVT+++A  +PGG+  YGI  ++ P     +E+   L+ 
Sbjct: 146 AVVGAGPAGLACAHRLAMLGHEVTVYDARLKPGGLNEYGIAAYKAPGGFAAREVAWLLQI 205

Query: 217 LGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSANEFLTRIN 276
            G+ +  +  +GR  ++ +LL E+DA+F+  G      L IPG        A EF+  + 
Sbjct: 206 GGIAVLENWKLGRNGSVADLLAEHDAVFLGMGLAGVNALTIPG--AEHATPATEFIAHLR 263

Query: 277 LMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGAEVI-IAYRRGKEDMTARIE 335
                        + VG+RV+VIG G TA+DAA  A  LGAE   I YRR + +M A   
Sbjct: 264 QAGDL------ATVPVGRRVVVIGGGMTAVDAAVQAKLLGAETASIVYRRSQAEMPASAH 317

Query: 336 EVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITV 395
           E +HA++ GV+ +    PV    D++G    V+F        R +    K+V   + + +
Sbjct: 318 EQEHAQKNGVRIVPNAAPVAIRKDDQG--YEVEF-------ARTETQGGKLVQLDDTLRI 368

Query: 396 EADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENLMTSIPGVFAGGD-AIRGEATVI 454
           +AD +  AIGQT    L     GL +   G I +D    T +  V+AGGD A  GE   +
Sbjct: 369 KADQIFTAIGQT----LGPVPEGLTI-TGGKIEIDAQGRTGMAHVWAGGDCATGGEDLTV 423

Query: 455 LAMGDGRKAAKAIHEYL 471
            A+  GR AA+ IH +L
Sbjct: 424 TAVAQGRDAAEDIHAFL 440


>dbj|BAA35120.1| (AB008845) NADH dependent Glutamate Synthase [Oryza sativa]
            Length = 2166
            
 Score =  212 bits (533), Expect = 1e-53
 Identities = 162/496 (32%), Positives = 251/496 (49%), Gaps = 45/496 (9%)

Query: 7    ERVPTPERSPVERVRDFNEVNL-GYTWELALREAERCLQCPKEYA---PCIKGCPVNIDI 62
            ER     R P ERV+D+ EV +      L   ++ RC+ C   +        GCP+   I
Sbjct: 1667 ERESISYRDPNERVKDWKEVAIESVPGPLLNTQSARCMDCGTPFCHQESSGAGCPLGNKI 1726

Query: 63   PGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINI 122
            P F   + +NR       REAL  +   N+ P  TGRVCP    CEG CV+G + +P++I
Sbjct: 1727 PEFNELVHQNR------WREALDRLLETNNFPEFTGRVCPAP--CEGSCVLGIIENPVSI 1778

Query: 123  GKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTI 182
              +E  + D   E G      M     ++R GK+VA+IG+GPAGL  A +L KMG+ VT+
Sbjct: 1779 KSIECAIIDKGFEEG-----WMVPRPPLQRTGKKVAIIGSGPAGLAAADQLNKMGHFVTV 1833

Query: 183  FEALHEPGGVLAYGIPEFRLPK-EILRKELKKLKFLGVEIKTDHIVGR--TVTIPELLEE 239
            FE     GG++ YG+P  +  K EI+++ +  +   G+    +  VG     +I  L  E
Sbjct: 1834 FERADRIGGLMMYGVPNMKTDKIEIVQRRVNLMAEEGITFVVNANVGSDPLYSIERLRSE 1893

Query: 240  YDAIFISTGAGTPKLLKIPGINLNGIYSANEFL---TRINLMKAYKFPEYDTPIVVGKRV 296
             DA+ ++ GA  P+ L IPG  L+G++ A EFL   T+  L    +   Y +    GK+V
Sbjct: 1894 NDAVILACGATKPRDLGIPGRELSGVHFAMEFLHANTKSLLDSNLEDGRYIS--AKGKKV 1951

Query: 297  IVIGAGNTAMDAARSALRLGAEVII--------AYRRGKED---MTARIEEVQHAKEE-G 344
            +VIG G+T  D   +++R G   I+          +R  ++      RI  V +  +E  
Sbjct: 1952 VVIGGGDTGTDCIGTSIRHGCTSIVNLELLTKPPSKRAADNPWPQWPRIFRVDYGHQEAS 2011

Query: 345  VKF-----MFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADT 399
             KF      + V    FIGDE G VKA++  ++K  +   +   ++I G+ E  T+EAD 
Sbjct: 2012 SKFGNDPRTYEVLTKRFIGDENGNVKALEVVRVKWEKVDGRFQLKEIEGSNE--TIEADL 2069

Query: 400  VIIAIGQTPNKILWRTTPGLKVREDGTIIVD-ENLMTSIPGVFAGGDAIRGEATVILAMG 458
            V++A+G    +       GL+            N  TS+ G+FA GD  RG++ V+ A+ 
Sbjct: 2070 VLLAMGFLGPEATIAEKLGLEKDNRSNFKAQFGNFATSVDGIFAAGDCRRGQSLVVWAIT 2129

Query: 459  DGRKAAKAIHEYLSKS 474
            +GR+AA A+ +YLS++
Sbjct: 2130 EGRQAAAAVDKYLSRN 2145


>pir||A64983 hypothetical protein b2146 - Escherichia coli (strain K-12)
           >gi|1788468|gb|AAC75207.1| (AE000303) putative
           oxidoreductase [Escherichia coli K12]
           Length = 412
           
 Score =  210 bits (528), Expect = 4e-53
 Identities = 147/450 (32%), Positives = 228/450 (50%), Gaps = 53/450 (11%)

Query: 24  NEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALR-ENRDNPRKAVRE 82
           +E+   +T  LA++EA RCL C    APC + CP   D   FIR++   N     + +RE
Sbjct: 8   DELTPAFTSLLAIKEASRCLLCHD--APCSQACPAQTDPGKFIRSIYFRNFKGAAETIRE 65

Query: 83  ALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVADYAREHGIDDEL 142
                   N+L A+  RVCP E  C+  C    V  PI+IG+L+RFV D+ ++ G+  E+
Sbjct: 66  N-------NALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQRFVTDFEQQTGM--EI 116

Query: 143 LMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYGIPEFRL 202
                 G K  GK VA+IGAGPAGL  +  L   GY+VTI+E    PGG L  GIP+FRL
Sbjct: 117 YQP---GTKTLGK-VAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPGGWLRNGIPQFRL 172

Query: 203 PKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINL 262
           P+ +L  E+ +++ +GV IK ++ VG T+T+ +L  E  A+ ++ G  +     +P    
Sbjct: 173 PQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVGLSSGS--GLPLFEH 230

Query: 263 NGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGAEVIIA 322
           + +  A +FL R          +    I + +  ++IG G+ AMD A +   LG + +  
Sbjct: 231 SDVEIAVDFLQRAR--------QAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTC 282

Query: 323 YRRGK-EDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKR 381
             R + ++  A  +E   A+E GV  +    PV   G++      V F+ ++   E    
Sbjct: 283 VAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGNK------VTFKHVRLSGE---- 332

Query: 382 GKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENLMTSIPGVF 441
                      +T+ AD +I+A+GQ       R     ++      I  +N  T  P VF
Sbjct: 333 -----------LTMAADKIILAVGQHA-----RLDAFAELEPQRNTIKTQNYQTRDPQVF 376

Query: 442 AGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
           A GD + G+ TV+ A+  G++AA+AIH YL
Sbjct: 377 AAGDIVEGDKTVVYAVKTGKEAAEAIHHYL 406


>sp|Q28007|DPYD_BOVIN DIHYDROPYRIMIDINE DEHYDROGENASE [NADP+] (DPD) (DIHYDROURACIL
           DEHYDROGENASE) (DIHYDROTHYMINE DEHYDROGENASE)
           >gi|677951|gb|AAB40985.1| (U20981) dihydropyrimidine
           dehydrogenase [Bos taurus]
           Length = 1025
           
 Score =  208 bits (525), Expect = 8e-53
 Identities = 157/454 (34%), Positives = 246/454 (53%), Gaps = 35/454 (7%)

Query: 35  ALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDNPRKAVREALKVIWACNSLP 94
           ALREA RCL+C    APC K CP N+DI  FI ++        K    A K+I++ N L 
Sbjct: 72  ALREAMRCLKCAD--APCQKSCPTNLDIKSFITSISN------KNYYGAAKMIFSDNPLG 123

Query: 95  AITGRVCPQEDQCEGVCVVGKVGD-PINIGKLERFVADYAREHGID---DELLMEEIRGI 150
              G VCP  D C G C +    + PINIG L+++  +  +   I    +  L    +  
Sbjct: 124 LTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQYATEVFKAMNIPQIRNPSLPPPEKMP 183

Query: 151 KRNGKRVAVIGAGPAGLTCAAELAKMGY-EVTIFEALHEPGGVLAYGIPEFRLPKEILRK 209
           +    ++A++GAGPA ++CA+ LA++GY ++TIFE     GG+    IP+FRLP +++  
Sbjct: 184 EAYSAKIALLGAGPASISCASFLARLGYNDITIFEKQEYVGGISTSEIPQFRLPYDVVNF 243

Query: 210 ELKKLKFLGVEIKTDHIVGRTVTIPELL------EEYDAIFISTGAGTPKLLKI-PGINL 262
           E++ +K LGV+I    I G+++++ ++       E Y A FI  G   PK   I  G+  
Sbjct: 244 EIELMKDLGVKI----ICGKSLSVNDITLSTLKEEGYKAAFIGIGLPEPKKDHIFQGLTQ 299

Query: 263 N-GIYSANEFLTRINLMKAYKFPEYDTPIV-VGKRVIVIGAGNTAMDAARSALRLGA-EV 319
           + G Y++ +FL  +            +P++ +   VIV+GAG+TA D A SALR GA  V
Sbjct: 300 DQGFYTSKDFLPLVAKSSKAGMCACHSPLLSIRGTVIVLGAGDTAFDCATSALRCGARRV 359

Query: 320 IIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERD 379
            I +R+G  ++ A  EEV+ A+EE  +F+ F++P + I  + GR+ A++F +     E+D
Sbjct: 360 FIVFRKGFVNIRAVPEEVELAREEKCEFLPFLSPRKVI-VKGGRIVAMQFVR----TEQD 414

Query: 380 KRGKRKIVGTGEYITVEADTVIIAIGQ--TPNKILWRTTPGLKVREDGTIIVDENLMTSI 437
           + GK    G  +   ++AD VI A G   +  K+    +P    R D   +  E + TS 
Sbjct: 415 ETGKWNEDG-DQIACLKADVVISAFGSVLSDPKVKEALSPIKFNRWDLPEVDPETMQTSE 473

Query: 438 PGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
           P VFAGGD +    T + A+ DG++A+  IH Y+
Sbjct: 474 PWVFAGGDVVGIANTTVEAVNDGKQASWYIHRYI 507


>sp|Q28943|DPYD_PIG DIHYDROPYRIMIDINE DEHYDROGENASE [NADP+] PRECURSOR (DPD)
           (DIHYDROURACIL DEHYDROGENASE) (DIHYDROTHYMINE
           DEHYDROGENASE) >gi|1082961|pir||B54718 dihydropyrimidine
           dehydrogenase (NADP+) (EC 1.3.1.2) - pig
           >gi|558307|gb|AAA57475.1| (U09179) dihydropyrimidine
           dehydrogenase [Sus scrofa]
           Length = 1025
           
 Score =  205 bits (516), Expect = 1e-51
 Identities = 158/454 (34%), Positives = 246/454 (53%), Gaps = 35/454 (7%)

Query: 35  ALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDNPRKAVREALKVIWACNSLP 94
           ALREA RCL+C    APC K CP ++DI  FI ++        K    A K+I++ N L 
Sbjct: 72  ALREAMRCLKCAD--APCQKSCPTHLDIKSFITSISN------KNYYGAAKMIFSDNPLG 123

Query: 95  AITGRVCPQEDQCEGVCVVGKVGD-PINIGKLERFVADYAREHGID---DELLMEEIRGI 150
              G VCP  D C G C +    +  INIG L++F ++  +   I    +  L  + +  
Sbjct: 124 LTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMP 183

Query: 151 KRNGKRVAVIGAGPAGLTCAAELAKMGY-EVTIFEALHEPGGVLAYGIPEFRLPKEILRK 209
           +    ++A++GAGPA ++CA+ LA++GY ++TIFE     GG+    IP+FRLP +++  
Sbjct: 184 EAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNF 243

Query: 210 ELKKLKFLGVEIKTDHIVGRT-----VTIPELLEE-YDAIFISTGAGTPKLLKI-PGINL 262
           E++ +K LGV+I    I G++     +T+  L EE Y A FI  G   PK   I  G+  
Sbjct: 244 EIELMKDLGVKI----ICGKSLSENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQ 299

Query: 263 N-GIYSANEFLTRINLMKAYKFPEYDTPI-VVGKRVIVIGAGNTAMDAARSALRLGA-EV 319
           + G Y++ +FL  +            +P+  +   VIV+GAG+TA D A SALR GA  V
Sbjct: 300 DQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRV 359

Query: 320 IIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERD 379
            + +R+G  ++ A  EEV+ AKEE  +F+ F++P + I  + GR+ AV+F +     E+D
Sbjct: 360 FLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVI-VKGGRIVAVQFVR----TEQD 414

Query: 380 KRGKRKIVGTGEYITVEADTVIIAIGQT--PNKILWRTTPGLKVREDGTIIVDENLMTSI 437
           + GK       + + ++AD VI A G      K+    +P    R D   +  E + TS 
Sbjct: 415 ETGKWN-EDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSE 473

Query: 438 PGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
           P VFAGGD +    T + ++ DG++A+  IH+Y+
Sbjct: 474 PWVFAGGDIVGMANTTVESVNDGKQASWYIHKYI 507


>pir||H69634 glutamate synthase (small subunit) gltB - Bacillus subtilis
           >gi|2634227|emb|CAB13727.1| (Z99113) glutamate synthase
           (small subunit) [Bacillus subtilis]
           >gi|2634238|emb|CAB13737.1| (Z99114) glutamate synthase
           (small subunit) [Bacillus subtilis]
           Length = 493
           
 Score =  203 bits (511), Expect = 4e-51
 Identities = 152/501 (30%), Positives = 245/501 (48%), Gaps = 50/501 (9%)

Query: 5   IKERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPG 64
           IK   P  ER P+ R++D+ E +  ++ E + R+  RC+ C   +      C +  DI G
Sbjct: 10  IKREKPA-ERDPLTRLKDWKEYSAPFSEEASKRQGARCMDCGTPF------CQIGADING 62

Query: 65  FIRALRENRDNP-------RKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVG 117
           F          P       R   +EAL+ +   N+ P  TGRVCP    CEG C +    
Sbjct: 63  FTSGCPIYNLIPEWNDLVYRGRWKEALERLLKTNNFPEFTGRVCPAP--CEGSCTLAISD 120

Query: 118 DPINIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMG 177
             ++I  +ER + D   E+G     + +     KR GK+VA++G+GPAGL  A +L + G
Sbjct: 121 PAVSIKNIERTIIDKGFENGWIQPRIPK-----KRTGKKVAIVGSGPAGLASADQLNQAG 175

Query: 178 YEVTIFEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELL 237
           + VT+FE     GG+L YGIP  +L K I+ + +K L   G++  T+  +G  +T  EL 
Sbjct: 176 HSVTVFERADRAGGLLTYGIPNMKLEKGIVERRIKLLTQEGIDFVTNTEIGVDITADELK 235

Query: 238 EEYDAIFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAY---KFPEYDTPIVVGK 294
           E++DA+ + TGA   + L I G +  G++ A ++LT     K+Y    F +       GK
Sbjct: 236 EQFDAVILCTGAQKQRDLLIEGRDSKGVHYAMDYLTLAT--KSYLDSNFKDKQFIDAKGK 293

Query: 295 RVIVIGAGNTAMDAARSALRLGAEVIIAYRRGKEDMTARIEE-----------VQHAKEE 343
            VIVIG G+T  D   +ALR  A+ +  + +  +   AR  +           +++A EE
Sbjct: 294 DVIVIGGGDTGADCVATALRQKAKSVHQFGKHPKLPPARTNDNMWPEQPHVFTLEYAYEE 353

Query: 344 -GVKF-----MFFVNPVEFIGDEEGRVK---AVKFEKMKPLEERDKRGKRKIVGTGEYIT 394
              KF      + +   + + D+ G++K    ++ EK+K   E  K   R++ GT +   
Sbjct: 354 REAKFGRDPREYSIQTTKMVADKNGKLKELHTIQMEKVK--NEHGKYEFRELPGTEK--V 409

Query: 395 VEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENLMTSIPGVFAGGDAIRGEATVI 454
             A  V IAIG    +       G+    +       +  T+I GVFA GDA RG++ ++
Sbjct: 410 WPAQLVFIAIGFEGTEQPLLKQFGVNSVNNKISAAYGDYQTNIDGVFAAGDARRGQSLIV 469

Query: 455 LAMGDGRKAAKAIHEYLSKSA 475
            A+ +GR+ A+ +  YL  S+
Sbjct: 470 WAINEGREVAREVDRYLMGSS 490


>dbj|BAA33218.1| (D85035) dihydropyrimidine dehydrogenase [Rattus norvegicus]
           Length = 1025
           
 Score =  203 bits (511), Expect = 4e-51
 Identities = 157/455 (34%), Positives = 247/455 (53%), Gaps = 37/455 (8%)

Query: 35  ALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDNPRKAVREALKVIWACNSLP 94
           ALREA RCL+C    APC K CP ++DI  FI ++        K    A K+I++ N L 
Sbjct: 72  ALREAVRCLKCAD--APCQKSCPTSLDIKSFITSIAN------KNYYGAAKLIFSDNPLG 123

Query: 95  AITGRVCPQEDQCEGVCVVGKVGD-PINIGKLERFVADYAREHGIDD---ELLMEEIRGI 150
              G VCP  D C G C +    + PINIG L++F  +  +   I      LL       
Sbjct: 124 LTCGMVCPTSDLCVGGCNLHATEEGPINIGGLQQFATEVFKAMNIPQIRSPLLPPPEHMP 183

Query: 151 KRNGKRVAVIGAGPAGLTCAAELAKMGY-EVTIFEALHEPGGVLAYGIPEFRLPKEILRK 209
           +    ++A+ GAGPA ++CA+ LA++GY ++TIFE     GG+    IP+FRLP +++  
Sbjct: 184 EAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNF 243

Query: 210 ELKKLKFLGVEIKTDHIVGRTVTIPEL----LEE--YDAIFISTGAGTPKLLKI-PGIN- 261
           E++ +K LGV+I    I G++++  E+    L+E  Y A FI  G   PK   I  G+  
Sbjct: 244 EIELMKDLGVKI----ICGKSISTDEMTLSTLKENGYKAAFIGIGLPEPKKDHIFQGLTQ 299

Query: 262 LNGIYSANEFLTRINLMKAYKFPEYDTPIV-VGKRVIVIGAGNTAMDAARSALRLGAE-V 319
           + G Y++ +FL  +            +P+  V   VIV+GAG+TA D A SALR GA  V
Sbjct: 300 VQGFYTSKDFLPLVAKGSKPGMCACHSPLPSVRGAVIVLGAGDTAFDCATSALRCGARRV 359

Query: 320 IIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERD 379
            I +R+G  ++ A  EE++ AKEE  +F+ F++P + I  ++G++  ++F +     E+D
Sbjct: 360 FIVFRKGFANIRAVPEEMELAKEEKCEFLPFLSPRKVIV-KDGKIVGMQFVRT----EQD 414

Query: 380 KRGKRKIVGTGEYITVEADTVIIAIGQTPN--KILWRTTPGLKVREDGTIIVD-ENLMTS 436
           + G   +    + + ++AD VI   G   +  K++   +P +K    G   V+ E + TS
Sbjct: 415 ETGNW-VEDEEQIVRLKADVVISPFGSVLDDPKVIEALSP-IKFNRWGLPEVNPETMQTS 472

Query: 437 IPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
            P VFAGGD +    T + ++ DG++A+  IHEY+
Sbjct: 473 EPWVFAGGDVVGMANTTVESVNDGKQASWYIHEYI 507


>pir||S74625 NADH-glutamate synthase small chain gltD - Synechocystis sp.
           (strain PCC 6803) >gi|1651850|dbj|BAA16777.1| (D90900)
           NADH-glutamate synthase small subunit [Synechocystis
           sp.]
           Length = 494
           
 Score =  203 bits (510), Expect = 5e-51
 Identities = 155/488 (31%), Positives = 238/488 (48%), Gaps = 46/488 (9%)

Query: 13  ERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEY-------APCIKGCPVNIDIPGF 65
           E SP +R+R+++E ++    +    +  RC+ C   +       +    GCP+N  IP F
Sbjct: 17  ELSPGDRLRNWDEFHVTMPDKQVETQGARCMDCGTPFCHTGSLISGMASGCPINNLIPEF 76

Query: 66  IRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKL 125
                 N    R   REAL  +   N+ P  TGRVCP    CEG CV+G    P+ I  +
Sbjct: 77  ------NDLVYRGLWREALDRLHKTNNFPEFTGRVCPAP--CEGSCVLGINNPPVTIKNI 128

Query: 126 ERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEA 185
           E  + +   + G      +      KR GK+VAV+G+GPAGL  AA+L K G+ VT++E 
Sbjct: 129 EYSIIEKGWQEG-----WVTPEPPAKRTGKKVAVVGSGPAGLAAAAQLNKAGHWVTVYER 183

Query: 186 LHEPGGVLAYGIPEFRLPK-EILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIF 244
              PGG+L YGIP  +L K E++ + L  L+  GV    +  +G+ +    LL++YDA+ 
Sbjct: 184 EDRPGGLLMYGIPNMKLDKEEVVLRRLNVLEAEGVTFVCNTEIGKDLPPETLLKDYDAVV 243

Query: 245 ISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNT 304
           + TGA  P+ L I G  L GI+ A EFLT        K P  +      K V++IG G+T
Sbjct: 244 LCTGATKPRDLAIAGRELEGIHFAMEFLTANTKAILDKTPGPNFISAKDKDVVIIGGGDT 303

Query: 305 AMDAARSALRLGAEVIIAYR---RGKEDMTA--------RIEEVQHAKEEGVKF------ 347
             D   ++LR G   ++      +  E+  A        ++ ++ + +EE          
Sbjct: 304 GTDCVGTSLRHGCRSLVQLEIMPKPPEERAANNPWPEWPKVYKMDYGQEEAAAVYGHDPR 363

Query: 348 MFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGK---RKIVGTGEYITVEADTVIIAI 404
            +     +  GD++GRVKAV    ++   E+D +G+   +++ GT +     A  V++A+
Sbjct: 364 SYLTTATKIEGDDQGRVKAVHTVDVR--WEKDGQGRFIPQQVAGTEQ--VRPAQLVLLAM 419

Query: 405 GQTPNKILWRTTPGLKVREDGTIIVD-ENLMTSIPGVFAGGDAIRGEATVILAMGDGRKA 463
           G    +        L     G I  +     TSIPGVFA GD  RG++ V+ A  +GR A
Sbjct: 420 GFVGPESQLLDAMKLDKDARGNIKAEYGQYETSIPGVFAAGDCRRGQSLVVWAFNEGRGA 479

Query: 464 AKAIHEYL 471
           AKA   YL
Sbjct: 480 AKACDLYL 487


>pir||F65071 hypothetical protein b2878 - Escherichia coli (strain K-12)
           >gi|887828|gb|AAA83059.1| (U28375) was o492p and o826p
           before splice [Escherichia coli]
           >gi|1789243|gb|AAC75916.1| (AE000371) putative
           oxidoreductase, Fe-S subunit [Escherichia coli K12]
           Length = 1032
           
 Score =  202 bits (508), Expect = 8e-51
 Identities = 147/421 (34%), Positives = 225/421 (52%), Gaps = 34/421 (8%)

Query: 50  APCIKGCPVNIDIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEG 109
           APC+  C +  DIP +IR L E+R        +AL++I+  N+LPAITG +C  + QC+ 
Sbjct: 458 APCVTACAIKQDIPEYIRLLGEHR------YADALELIYQRNALPAITGHIC--DHQCQY 509

Query: 110 VCVVGKVGDPINIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTC 169
            C        +NI +L++     A E G D+            +   VAVIGAGPAGL  
Sbjct: 510 NCTRLDYDSALNIRELKKV----ALEKGWDEYKQRWHKPAGSGSRHPVAVIGAGPAGLAA 565

Query: 170 AAELAKMGYEVTIFEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGR 229
              LA+ G+ VT+FE     GGV+   IP+FR+P E+++ ++  +   GV  K ++    
Sbjct: 566 GYFLARAGHPVTLFEREANAGGVVKNIIPQFRIPAELIQHDIDFVAAHGV--KFEYGCSP 623

Query: 230 TVTIPELLEE-YDAIFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDT 288
            +TI +L  + +  + I+TG      +K+ G N N ++ +  FL   N   A K      
Sbjct: 624 DLTIEQLKNQGFHYVLIATGTDKNSGVKLAGDNQN-VWKSLPFLREYNKGTALK------ 676

Query: 289 PIVVGKRVIVIGAGNTAMDAARSALRL-GAE-VIIAYRRGKEDMTARIEEVQHAKEEGVK 346
              +GK V+V+GAGNTAMD AR+ALR+ G E   I YRR  ++M A  EE + A  +GV+
Sbjct: 677 ---LGKHVVVVGAGNTAMDCARAALRVPGVEKATIVYRRSLQEMPAWREEYEEALHDGVE 733

Query: 347 FMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQ 406
           F F  NP  F  D +G +      ++  L E D++G+R+ V T E +T+  D++I AIG+
Sbjct: 734 FRFLNNPERF--DADGTLTL----RVMSLGEPDEKGRRRPVETNETVTLLVDSLITAIGE 787

Query: 407 TPNKILWRTTPGLKVREDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKA 466
             +        G+ + ++G   VD N  T +  VF  GD  RG ++++ A+G  R+A  A
Sbjct: 788 QQDTEALNAM-GVPLDKNGWPDVDHNGETRLTDVFMIGDVQRGPSSIVAAVGTARRATDA 846

Query: 467 I 467
           I
Sbjct: 847 I 847


>sp|Q03460|GLSN_MEDSA GLUTAMATE SYNTHASE [NADH] PRECURSOR (NADH-GOGAT)
            >gi|484529|pir||JQ1977 glutamate synthase (NADH) (EC
            1.4.1.14) precursor [validated] - alfalfa
            >gi|166412|gb|AAB46617.1| (L01660) NADH-glutamate
            synthase [Medicago sativa]
            Length = 2194
            
 Score =  201 bits (507), Expect = 1e-50
 Identities = 157/495 (31%), Positives = 247/495 (49%), Gaps = 48/495 (9%)

Query: 7    ERVPTPERSPVERVRDFNEVNLGYT-WELALREAERCLQCPKEYAPCIK-GCPVNIDIPG 64
            ER     R P  R+ D+NEV +      L   ++ RC+ C   +      GCP+   IP 
Sbjct: 1688 EREGVQYRDPNVRLNDWNEVMMETKPGPLLKTQSARCMDCGTPFCHQENSGCPLGNKIPE 1747

Query: 65   FIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGK 124
            F   + +NR       +EAL+ +   N+ P  TGRVCP    CEG CV+G + +P++I  
Sbjct: 1748 FNELVYQNR------WQEALERLLETNNFPEFTGRVCPAP--CEGSCVLGIIENPVSIKN 1799

Query: 125  LERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFE 184
            +E  + D A E G      M     +KR GKRVA++G+GP+GL  A +L KMG+ VT+FE
Sbjct: 1800 IECAIIDKAFEEG-----WMIPRPPVKRTGKRVAIVGSGPSGLAAADQLNKMGHIVTVFE 1854

Query: 185  ALHEPGGVLAYGIPEFRLPK-EILRKELKKLKFLGVEIKTDHIVG--RTVTIPELLEEYD 241
                 GG++ YG+P  +  K +I+++ +  +   G+    +  +G     ++  L EE D
Sbjct: 1855 RADRIGGLMMYGVPNMKTDKVDIVQRRVNLMAEEGINFVVNANIGLDPLYSLERLREEND 1914

Query: 242  AIFISTGAGTPKLLKIPGINLNGIYSANEFL---TRINLMKAYKFPEYDTPIVVGKRVIV 298
            AI ++ GA  P+ L +PG  L+G++ A EFL   T+  L    +   Y +    GK+V+V
Sbjct: 1915 AIVLAVGATKPRDLPVPGRELSGVHFAMEFLHANTKSLLDSNLQDGNYIS--AKGKKVVV 1972

Query: 299  IGAGNTAMDAARSALRLGAEVIIAYRRGKE-----------DMTARIEEVQHAKEEG-VK 346
            IG G+T  D   +++R G   ++      +               RI  V +  +E   K
Sbjct: 1973 IGGGDTGTDCIGTSIRHGCTAVVNLELLPQPPPTRAPGNPWPQWPRIFRVDYGHQEAETK 2032

Query: 347  F-----MFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGK---RKIVGTGEYITVEAD 398
            F      + V    F+GDE G VK +  E ++   E+D+ GK   ++I G+ E I  EAD
Sbjct: 2033 FGKDPRTYEVLTKRFVGDENGVVKGL--EVVRVCWEKDETGKFQFKEIEGSEEII--EAD 2088

Query: 399  TVIIAIGQTPNKILWRTTPGLKVREDGTIIVD-ENLMTSIPGVFAGGDAIRGEATVILAM 457
             V++A+G    +       G++         D     TS+ GVFA GD  RG++ V+ A+
Sbjct: 2089 LVLLAMGFLGPEATIAEKLGVERDNRSNFKADYGRFSTSVDGVFAAGDCRRGQSLVVWAI 2148

Query: 458  GDGRKAAKAIHEYLS 472
             +GR+AA  +  YL+
Sbjct: 2149 SEGRQAAAQVDSYLT 2163


>pir||B75551 glutamate synthase, small subunit - Deinococcus radiodurans
           (strain R1) >gi|6457850|gb|AAF09769.1|AE001880_6
           (AE001880) glutamate synthase, small subunit
           [Deinococcus radiodurans]
           Length = 488
           
 Score =  201 bits (507), Expect = 1e-50
 Identities = 153/488 (31%), Positives = 245/488 (49%), Gaps = 56/488 (11%)

Query: 15  SPVE-RVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENR 73
           +P++ R++ ++E  L      A  +A RC+ C   +  C  GCPVN  IP F   + E+ 
Sbjct: 18  APIDARLKHYHEFMLPLDSASARLQATRCMDCGIPF--CNNGCPVNNIIPDFNNLVFEDD 75

Query: 74  DNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVADYA 133
                  + AL V+ A N+ P  TGR+CP    CE  C +    DP+ I  +E  + +  
Sbjct: 76  ------WKAALDVLHATNNFPEFTGRICPAP--CEAACTLNISEDPVGIKSIELAIIERG 127

Query: 134 REHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVL 193
            + G      +       + GK+VAV+G+GPAGL  A +LA+ G++VT+FE     GG++
Sbjct: 128 WQEG-----WVRPTPAEVKTGKKVAVVGSGPAGLAAAQQLARAGHDVTVFEKNDRVGGLV 182

Query: 194 AYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVG-------------RTVTIPELLEEY 240
            YGIP+F+L K  + + +++++  GV  +T  +VG               VT  EL E++
Sbjct: 183 RYGIPDFKLDKSHIDRRIEQMQAEGVTFRTGVLVGDWDENSKITNLSKERVTPAELREQF 242

Query: 241 DAIFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKA-YKFPEYDTPIVVGKRVIVI 299
           DA+ ++ G+ TP+ L  PG  LNGI+ A EFL + N + A  KF         GK V+VI
Sbjct: 243 DAVVLAGGSETPRDLPAPGRELNGIHYAMEFLPQQNRVNAGDKFKGQIR--ADGKHVVVI 300

Query: 300 GAGNTAMDAARSALRLGAEVIIAYRRGKEDMTARIE-----------EVQHAKEEGVKFM 348
           G G+T  D   ++ R GA  +  +    +      +               + EEG    
Sbjct: 301 GGGDTGSDCVGTSNRHGAAGVTQFEVMPQPPEQENKPLTWPYWPMKLRTSTSHEEGAVRE 360

Query: 349 FFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGK-RKIVGTGEYITVEADTVIIAIGQT 407
           F +   EFIG + G+V  V+  +++      K GK  +I G+ E  T +AD V++A+G T
Sbjct: 361 FAIATKEFIG-KGGKVTGVRTVRVEM-----KDGKLEEIPGSEE--THKADLVLLAMGFT 412

Query: 408 PNKILWRTTPGLKVREDGTIIVDE----NLMTSIPGVFAGGDAIRGEATVILAMGDGRKA 463
                     G+     G ++         +TS+PGVFA GD  RG++ V+ A+ +GR+A
Sbjct: 413 NPMQSVLDAFGVDKDPRGNVLAGTEEHGGYLTSVPGVFAAGDMRRGQSLVVWAIREGRQA 472

Query: 464 AKAIHEYL 471
           A+A+ ++L
Sbjct: 473 ARAVDQFL 480


>dbj|BAA12742.1| (D85230) small subunit of NADH-dependent glutamate synthase
           [Plectonema boryanum]
           Length = 492
           
 Score =  200 bits (504), Expect = 2e-50
 Identities = 155/491 (31%), Positives = 250/491 (50%), Gaps = 54/491 (10%)

Query: 13  ERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEY-------APCIKGCPVNIDIPGF 65
           E +P++R+R+++E +L    E    +  RC+ C   +       +    GCP+N  IP +
Sbjct: 17  ELAPLDRIRNWDEFHLSMPEENLRTQGARCMDCGIPFCHTGTLISGMASGCPINNLIPEW 76

Query: 66  IRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKL 125
              +       R   +EAL  +   N+ P  TGRVCP    CEG CV+G    P+ I  +
Sbjct: 77  NDLIY------RGLWKEALDRLHKTNNFPEFTGRVCPAP--CEGSCVLGIHNPPVTIKNI 128

Query: 126 ERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEA 185
           E  +A    E G ++  +  E    KR GK++A++G+GPAGL+ AA+L K+G+ VT+FE 
Sbjct: 129 EYSIA----EKGWNEGWIKPEPPA-KRTGKKIAIVGSGPAGLSAAAQLNKVGHWVTVFER 183

Query: 186 LHEPGGVLAYGIPEFRLPK-EILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIF 244
              PGG+L YGIP  +L K E++ + L  L+  GV+   +  +G+ +   +LL ++DA+ 
Sbjct: 184 ADRPGGLLMYGIPNMKLDKQEVVMRRLNILEAEGVKFVCNTEIGKDLPAEDLLRDFDAVV 243

Query: 245 ISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVV--GKRVIVIGAG 302
           + TGA  P+ L I G  L GI+ A +FLT           +   P +   GK V++IG G
Sbjct: 244 LCTGATKPRDLPIEGRQLKGIHFAMDFLT----ANTQAVLDQTEPAITAQGKDVVIIGGG 299

Query: 303 NTAMDAARSALRLGAEVIIAYR---RGKEDMT--------ARIEEVQHAKEE-GVKF--- 347
           +T  D   +++R G   ++      +  E+           ++ ++ + +EE   KF   
Sbjct: 300 DTGTDCVGTSIRHGCNGLVQLEILPQPPEERAPNNPWPEYPKVYKMDYGQEEAAAKFGGD 359

Query: 348 --MFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGK---RKIVGTGEYITVEADTVII 402
              +      F GDE+G VKAV   +++   ER+++G+   ++I GT + I   A  V++
Sbjct: 360 PRAYLRTATHFEGDEQGNVKAVHTVEVQ--WERNEQGQFIPKQIPGTEKII--PAQLVLL 415

Query: 403 AIGQTPNKILWRTTPGLKVREDGTIIVDE--NLMTSIPGVFAGGDAIRGEATVILAMGDG 460
           A+G    +       GL  R+  + I  E     TSIP VFA GD  RG++ V+ A  +G
Sbjct: 416 AMGFLGPEQPLLDAMGLD-RDARSNIKSEYGRYTTSIPKVFAAGDCRRGQSLVVWAFNEG 474

Query: 461 RKAAKAIHEYL 471
           R AA+    YL
Sbjct: 475 RGAARECDLYL 485


>gb|AAB41904.1| (L37606) NADH-dependent glutamate synthase [Medicago sativa]
            Length = 2194
            
 Score =  199 bits (502), Expect = 4e-50
 Identities = 156/495 (31%), Positives = 246/495 (49%), Gaps = 48/495 (9%)

Query: 7    ERVPTPERSPVERVRDFNEVNLGYT-WELALREAERCLQCPKEYAPCIK-GCPVNIDIPG 64
            ER     R P  R+ D+NEV +      L   ++ RC+ C   +      GCP+   IP 
Sbjct: 1688 EREGVQYRDPNVRLNDWNEVMMETKPGPLLKTQSARCMDCGTPFCHQENSGCPLGNKIPE 1747

Query: 65   FIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGK 124
            F   + +NR       +EAL+ +   N+ P  TGRVCP    CEG CV+G + +P++I  
Sbjct: 1748 FNELVYQNR------WQEALERLLETNNFPEFTGRVCPAP--CEGSCVLGIIENPVSIKN 1799

Query: 125  LERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFE 184
            +E  + D A E G      M     +KR GKRVA++G+GP+GL  A +L KMG+ VT+FE
Sbjct: 1800 IECAIIDKAFEEG-----WMIPRPPVKRTGKRVAIVGSGPSGLAAADQLNKMGHIVTVFE 1854

Query: 185  ALHEPGGVLAYGIPEFRLPK-EILRKELKKLKFLGVEIKTDHIVG--RTVTIPELLEEYD 241
                 GG++ YG+P  +  K +I+++ +  +   G+    +  +G     ++  L EE D
Sbjct: 1855 RADRIGGLMMYGVPNMKTDKVDIVQRRVNLMAEEGINFVVNANIGLDPLYSLERLREEND 1914

Query: 242  AIFISTGAGTPKLLKIPGINLNGIYSANEFL---TRINLMKAYKFPEYDTPIVVGKRVIV 298
            AI ++ GA  P+ L +PG  L+G++ A EFL   T+  L    +   Y +    GK+V+V
Sbjct: 1915 AIVLAVGATKPRDLPVPGRELSGVHFAMEFLHANTKSLLDSNLQDGNYIS--AKGKKVVV 1972

Query: 299  IGAGNTAMDAARSALRLGAEVIIAYRRGKE-----------DMTARIEEVQHAKEEG-VK 346
            IG G+T  D   +++R G   ++      +               RI  V +  +E   K
Sbjct: 1973 IGGGDTGTDCIGTSIRHGCTAVVNLELLPQPPPTRAPGNPWPQWPRIFRVDYGHQEAETK 2032

Query: 347  F-----MFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGK---RKIVGTGEYITVEAD 398
            F      + V    F+GDE G VK +  E ++   E+D+ GK   ++I G+ E I  EAD
Sbjct: 2033 FGKDPRTYEVLTKRFVGDENGVVKGL--EVVRVCWEKDETGKFQFKEIEGSEEII--EAD 2088

Query: 399  TVIIAIGQTPNKILWRTTPGLKVREDGTIIVD-ENLMTSIPGVFAGGDAIRGEATVILAM 457
             V++A+G    +       G++         D     TS+ GVFA GD  RG++ V+ A+
Sbjct: 2089 LVLLAMGFLGPEATIAEKLGVERDNRSNFKADYGRFSTSVDGVFAAGDCRRGQSLVVWAI 2148

Query: 458  GDGRKAAKAIHEYLS 472
             +GR+ A  +  YL+
Sbjct: 2149 SEGRQRAAQVDSYLT 2163


>gi|4503373 dihydropyrimidine dehydrogenase [Homo sapiens]
           >gi|2498310|sp|Q12882|DPYD_HUMAN DIHYDROPYRIMIDINE
           DEHYDROGENASE [NADP+] PRECURSOR (DPD) (DIHYDROURACIL
           DEHYDROGENASE) (DIHYDROTHYMINE DEHYDROGENASE)
           >gi|1082333|pir||A54718 dihydropyrimidine dehydrogenase
           (NADP+) (EC 1.3.1.2) - human >gi|558305|gb|AAA57474.1|
           (U09178) dihydropyrimidine dehydrogenase [Homo sapiens]
           Length = 1025
           
 Score =  199 bits (501), Expect = 6e-50
 Identities = 158/455 (34%), Positives = 247/455 (53%), Gaps = 37/455 (8%)

Query: 35  ALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDNPRKAVREALKVIWACNSLP 94
           ALREA RCL+C    APC K CP N+DI  FI ++        K    A K+I++ N L 
Sbjct: 72  ALREAMRCLKCAD--APCQKSCPTNLDIKSFITSIAN------KNYYGAAKMIFSDNPLG 123

Query: 95  AITGRVCPQEDQCEGVCVVGKVGD-PINIGKLERFVADYAREHGID---DELLMEEIRGI 150
              G VCP  D C G C +    + PINIG L++F  +  +   I    +  L    +  
Sbjct: 124 LTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMSIPQIRNPSLPPPEKMS 183

Query: 151 KRNGKRVAVIGAGPAGLTCAAELAKMGY-EVTIFEALHEPGGVLAYGIPEFRLPKEILRK 209
           +    ++A+ GAGPA ++CA+ LA++GY ++TIFE     GG+    IP+FRLP +++  
Sbjct: 184 EAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNF 243

Query: 210 ELKKLKFLGVEIKTDHIVGRTVTIPEL----LEE--YDAIFISTGAGTP-KLLKIPGINL 262
           E++ +K LGV+I    I G+++++ E+    L+E  Y A FI  G   P K     G+  
Sbjct: 244 EIELMKDLGVKI----ICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPEPNKDAIFQGLTQ 299

Query: 263 N-GIYSANEFLTRINLMKAYKFPEYDTPI-VVGKRVIVIGAGNTAMDAARSALRLGA-EV 319
           + G Y++ +FL  +            +P+  +   VIV+GAG+TA D A SALR GA  V
Sbjct: 300 DQGFYTSKDFLPLVAKGSKAGMCACHSPLPSIRGVVIVLGAGDTAFDCATSALRCGARRV 359

Query: 320 IIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERD 379
            I +R+G  ++ A  EE++ AKEE  +F+ F++P + I  + GR+ A++F +     E+D
Sbjct: 360 FIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVI-VKGGRIVAMQFVR----TEQD 414

Query: 380 KRGKRKIVGTGEYITVEADTVIIAIGQ--TPNKILWRTTPGLKVREDGTIIVD-ENLMTS 436
           + GK       + + ++AD VI A G   +  K+    +P +K    G   VD E + TS
Sbjct: 415 ETGKWN-EDEDQMVHLKADVVISAFGSVLSDPKVKEALSP-IKFNRWGLPEVDPETMQTS 472

Query: 437 IPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
              VFAGGD +    T + ++ DG++A+  IH+Y+
Sbjct: 473 EAWVFAGGDVVGLANTTVESVNDGKQASWYIHKYV 507


>gb|AAB51366.1| (U20938) No definition line found [Homo sapiens]
           >gi|6729338|dbj|BAA89789.1| (AB003063) dihydropyrimidine
           dehydrogenase [Homo sapiens]
           Length = 1025
           
 Score =  199 bits (501), Expect = 6e-50
 Identities = 158/455 (34%), Positives = 247/455 (53%), Gaps = 37/455 (8%)

Query: 35  ALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDNPRKAVREALKVIWACNSLP 94
           ALREA RCL+C    APC K CP N+DI  FI ++        K    A K+I++ N L 
Sbjct: 72  ALREAMRCLKCAD--APCQKSCPTNLDIKSFITSIAN------KNYYGAAKMIFSDNPLG 123

Query: 95  AITGRVCPQEDQCEGVCVVGKVGD-PINIGKLERFVADYAREHGID---DELLMEEIRGI 150
              G VCP  D C G C +    + PINIG L++F  +  +   I    +  L    +  
Sbjct: 124 LTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMSIPQIRNPSLPPPEKMS 183

Query: 151 KRNGKRVAVIGAGPAGLTCAAELAKMGY-EVTIFEALHEPGGVLAYGIPEFRLPKEILRK 209
           +    ++A+ GAGPA ++CA+ LA++GY ++TIFE     GG+    IP+FRLP +++  
Sbjct: 184 EAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNF 243

Query: 210 ELKKLKFLGVEIKTDHIVGRTVTIPEL----LEE--YDAIFISTGAGTP-KLLKIPGINL 262
           E++ +K LGV+I    I G+++++ E+    L+E  Y A FI  G   P K     G+  
Sbjct: 244 EIELMKDLGVKI----ICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPEPNKDAIFQGLTQ 299

Query: 263 N-GIYSANEFLTRINLMKAYKFPEYDTPI-VVGKRVIVIGAGNTAMDAARSALRLGA-EV 319
           + G Y++ +FL  +            +P+  +   VIV+GAG+TA D A SALR GA  V
Sbjct: 300 DQGFYTSKDFLPLVAKGSKAGMCACHSPLPSIRGVVIVLGAGDTAFDCATSALRCGARRV 359

Query: 320 IIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERD 379
            I +R+G  ++ A  EE++ AKEE  +F+ F++P + I  + GR+ A++F +     E+D
Sbjct: 360 FIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVI-VKGGRIVAMQFVR----TEQD 414

Query: 380 KRGKRKIVGTGEYITVEADTVIIAIGQ--TPNKILWRTTPGLKVREDGTIIVD-ENLMTS 436
           + GK       + + ++AD VI A G   +  K+    +P +K    G   VD E + TS
Sbjct: 415 ETGKWN-EDEDQMVHLKADVVISAFGSVLSDPKVKEALSP-IKFNRWGLPEVDPETMQTS 472

Query: 437 IPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
              VFAGGD +    T + ++ DG++A+  IH+Y+
Sbjct: 473 EAWVFAGGDVVGLANTTVESVNDGKQASWYIHKYV 507


>gb|AAF49409.1| (AE003526) CG9674 gene product [alt 1] [Drosophila melanogaster]
            Length = 2162
            
 Score =  199 bits (500), Expect = 7e-50
 Identities = 151/488 (30%), Positives = 247/488 (49%), Gaps = 41/488 (8%)

Query: 7    ERVPTPERSPVERVRDFNEV-NLGYTWELALREAERCLQCPKEYAPCIK-GCPVNIDIPG 64
            +R   P R   ER +D++EV N  +  +    +A RC++C   +      GCP+   IP 
Sbjct: 1678 KRESAPYRDAGERQKDWDEVYNFPHVRKNLKVQAARCMECGVPFCQSNSTGCPLGNIIPK 1737

Query: 65   FIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGK 124
            +   +           +EAL+ +   N+ P  TGRVCP    CEG CV+G     + I  
Sbjct: 1738 WNDLVFHGE------WQEALRQLLQTNNFPEFTGRVCPAP--CEGSCVLGISEPAVTIKN 1789

Query: 125  LERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFE 184
            +E  + D+A E G     +  EI  + R GKRVA++G+GP+GL  + +L + G+ VT+FE
Sbjct: 1790 IECAIIDHAFEQG----WIKPEIPEV-RTGKRVAIVGSGPSGLAASQQLNRAGHFVTVFE 1844

Query: 185  ALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIF 244
                 GG+L YGIP  +L KE++++ +  +   G+E +T+  VG+ +   +LL+EYDA+ 
Sbjct: 1845 RNDRVGGLLQYGIPTMKLSKEVVKRRVDLMADEGIEFRTNVHVGKDLKAEQLLQEYDAVL 1904

Query: 245  ISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNT 304
            ++TG+  P+ L +   +L GI+ A EFL      K     + D     GK VI+IG G+T
Sbjct: 1905 LTTGSTWPRDLPLANRDLKGIHFAMEFLEA--QQKKQLGGKNDIISAAGKNVIIIGGGDT 1962

Query: 305  AMDAARSALRLGAEVIIAYRRGKEDMTARIEE-----------VQHAKEEGVKFMFFVNP 353
              D   ++LR GA+ I  +    E    R ++           V +  EE VK  +  +P
Sbjct: 1963 GCDCIATSLRQGAKSITTFEILPEPPQKRAQDNPWPQWPKVFRVDYGHEE-VKLKWGKDP 2021

Query: 354  -------VEFIGDEEGRVKAVKFEKMK-PLEERDKRGKRKIVGTGEYITVEADTVIIAIG 405
                    EF+G E G +K V   +++    E  +   +++ G+ +Y    AD +++A+G
Sbjct: 2022 RQYCTTTKEFVG-ENGAIKGVNTVEVEWTKTETGQWRMQEVAGSEKYF--PADLILLAMG 2078

Query: 406  QTPNKILWRTTPGLKVREDGTIIVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGRKAA 464
                +    +  GL++   G I        TS   VFA GD  RG++ V+ A+ +GR+AA
Sbjct: 2079 FLGPEKTVPSELGLELDPRGNIKASNGQYGTSNSKVFAAGDCRRGQSLVVWAITEGRQAA 2138

Query: 465  KAIHEYLS 472
            + +  YL+
Sbjct: 2139 RQVDSYLT 2146


>gb|AAF49410.1| (AE003526) CG9674 gene product [alt 3] [Drosophila melanogaster]
           >gi|7294056|gb|AAF49411.1| (AE003526) CG9674 gene
           product [alt 2] [Drosophila melanogaster]
           Length = 915
           
 Score =  199 bits (500), Expect = 7e-50
 Identities = 151/488 (30%), Positives = 247/488 (49%), Gaps = 41/488 (8%)

Query: 7   ERVPTPERSPVERVRDFNEV-NLGYTWELALREAERCLQCPKEYAPCIK-GCPVNIDIPG 64
           +R   P R   ER +D++EV N  +  +    +A RC++C   +      GCP+   IP 
Sbjct: 431 KRESAPYRDAGERQKDWDEVYNFPHVRKNLKVQAARCMECGVPFCQSNSTGCPLGNIIPK 490

Query: 65  FIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGK 124
           +   +           +EAL+ +   N+ P  TGRVCP    CEG CV+G     + I  
Sbjct: 491 WNDLVFHGE------WQEALRQLLQTNNFPEFTGRVCPAP--CEGSCVLGISEPAVTIKN 542

Query: 125 LERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFE 184
           +E  + D+A E G     +  EI  + R GKRVA++G+GP+GL  + +L + G+ VT+FE
Sbjct: 543 IECAIIDHAFEQG----WIKPEIPEV-RTGKRVAIVGSGPSGLAASQQLNRAGHFVTVFE 597

Query: 185 ALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIF 244
                GG+L YGIP  +L KE++++ +  +   G+E +T+  VG+ +   +LL+EYDA+ 
Sbjct: 598 RNDRVGGLLQYGIPTMKLSKEVVKRRVDLMADEGIEFRTNVHVGKDLKAEQLLQEYDAVL 657

Query: 245 ISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNT 304
           ++TG+  P+ L +   +L GI+ A EFL      K     + D     GK VI+IG G+T
Sbjct: 658 LTTGSTWPRDLPLANRDLKGIHFAMEFLEA--QQKKQLGGKNDIISAAGKNVIIIGGGDT 715

Query: 305 AMDAARSALRLGAEVIIAYRRGKEDMTARIEE-----------VQHAKEEGVKFMFFVNP 353
             D   ++LR GA+ I  +    E    R ++           V +  EE VK  +  +P
Sbjct: 716 GCDCIATSLRQGAKSITTFEILPEPPQKRAQDNPWPQWPKVFRVDYGHEE-VKLKWGKDP 774

Query: 354 -------VEFIGDEEGRVKAVKFEKMK-PLEERDKRGKRKIVGTGEYITVEADTVIIAIG 405
                   EF+G E G +K V   +++    E  +   +++ G+ +Y    AD +++A+G
Sbjct: 775 RQYCTTTKEFVG-ENGAIKGVNTVEVEWTKTETGQWRMQEVAGSEKYF--PADLILLAMG 831

Query: 406 QTPNKILWRTTPGLKVREDGTIIVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGRKAA 464
               +    +  GL++   G I        TS   VFA GD  RG++ V+ A+ +GR+AA
Sbjct: 832 FLGPEKTVPSELGLELDPRGNIKASNGQYGTSNSKVFAAGDCRRGQSLVVWAITEGRQAA 891

Query: 465 KAIHEYLS 472
           + +  YL+
Sbjct: 892 RQVDSYLT 899


>gi|6320030 Glutamate synthase (NADPH); Glt1p [Saccharomyces cerevisiae]
            >gi|2131263|pir||S61041 glutamate synthase (NADH) (EC
            1.4.1.14) glt1 precursor [similarity] - yeast
            (Saccharomyces cerevisiae) >gi|1061267|emb|CAA91574.1|
            (Z67750) putative protein [Saccharomyces cerevisiae]
            >gi|1431274|emb|CAA98745.1| (Z74219) ORF YDL171c
            [Saccharomyces cerevisiae]
            Length = 2145
            
 Score =  198 bits (499), Expect = 9e-50
 Identities = 144/488 (29%), Positives = 241/488 (48%), Gaps = 35/488 (7%)

Query: 4    LIKERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIP 63
            +I +R     R P  RV D+ E     T + A  +  RC+ C   +     GCP++  IP
Sbjct: 1645 MIHKRRHETHRDPRTRVNDWKEFTNPITKKDAKYQTARCMDCGTPFCLSDTGCPLSNIIP 1704

Query: 64   GFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIG 123
             F   L +N+       + AL  +   N+ P  TGRVCP    CEG C +G + DP+ I 
Sbjct: 1705 KFNELLFKNQ------WKLALDKLLETNNFPEFTGRVCPAP--CEGACTLGIIEDPVGIK 1756

Query: 124  KLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIF 183
             +ER + D A + G      ++      R G  V VIG+GPAGL CA  L + G+ VT++
Sbjct: 1757 SVERIIIDNAFKEG-----WIKPCPPSTRTGFTVGVIGSGPAGLACADMLNRAGHTVTVY 1811

Query: 184  EALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAI 243
            E     GG+L YGIP  +L K I+++ +  L   G++  T+  +G+T+++ EL  +++A+
Sbjct: 1812 ERSDRCGGLLMYGIPNMKLDKAIVQRRIDLLSAEGIDFVTNTEIGKTISMDELKNKHNAV 1871

Query: 244  FISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGN 303
              + G+  P+ L I G  L  I  A + L         K  E     + GK+VIV+G G+
Sbjct: 1872 VYAIGSTIPRDLPIKGRELKNIDFAMQLLESNTKALLNKDLEIIREKIQGKKVIVVGGGD 1931

Query: 304  TAMDAARSALRLGAEVIIAY--------RRGKED---MTARIEEVQHAKEEGVKFMFFVN 352
            T  D   +++R GA  ++ +         R K++      R+  V +   E VK  +  +
Sbjct: 1932 TGNDCLGTSVRHGAASVLNFELLPEPPVERAKDNPWPQWPRVMRVDYGHAE-VKEHYGRD 1990

Query: 353  P-------VEFIGDEEGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIG 405
            P        EFIG++EG V A++  +++  + +    +   +   E I  EAD +++++G
Sbjct: 1991 PREYCILSKEFIGNDEGEVTAIRTVRVEWKKSQSGVWQMVEIPNSEEI-FEADIILLSMG 2049

Query: 406  QTPNKILWRTTPGLKVREDGTIIVDENLMTSIPG--VFAGGDAIRGEATVILAMGDGRKA 463
                +++      +K    GTI   ++   SI G   FA GD  RG++ ++ A+ +GRK 
Sbjct: 2050 FVGPELINGNDNEVKKTRRGTIATLDDSSYSIDGGKTFACGDCRRGQSLIVWAIQEGRKC 2109

Query: 464  AKAIHEYL 471
            A ++ ++L
Sbjct: 2110 AASVDKFL 2117


>dbj|BAA97323.1| (AB020754) NADH-dependent glutamate synthase [Arabidopsis thaliana]
            Length = 2216
            
 Score =  198 bits (499), Expect = 9e-50
 Identities = 152/497 (30%), Positives = 252/497 (50%), Gaps = 48/497 (9%)

Query: 7    ERVPTPERSPVERVRDFNEV-NLGYTWELALREAERCLQCPKEYAPCIK-GCPVNIDIPG 64
            ER     R P  R+ D+NEV        L   ++ RC+ C   +      GCP+   IP 
Sbjct: 1717 EREGVKYRDPNVRLNDWNEVMEESKPGPLLTTQSARCMDCGTPFCHQENSGCPLGNKIPE 1776

Query: 65   FIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGK 124
            F   + +NR       +EAL  +   N+ P  TGRVCP    CEG CV+G + +P++I  
Sbjct: 1777 FNELVYQNR------WQEALNRLLETNNFPEFTGRVCPAP--CEGSCVLGIIENPVSIKS 1828

Query: 125  LERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFE 184
            +E  + D A E G      M     +KR GK+VA+IG+GPAGL  A +L KMG+ VT++E
Sbjct: 1829 IECAIIDKAFEEG-----WMVPRPPLKRTGKKVAIIGSGPAGLAAADQLNKMGHLVTVYE 1883

Query: 185  ALHEPGGVLAYGIPEFRLPK-EILRKELKKLKFLGVEIKTDHIVGR--TVTIPELLEEYD 241
                 GG++ YG+P  +  K +++++ +  +   G+    +  +G+  + ++  L EE D
Sbjct: 1884 RSDRIGGLMMYGVPNMKTDKIDVVQRRVDLMTKEGINFVVNANIGKDPSYSLDGLKEEND 1943

Query: 242  AIFISTGAGTPKLLKIPGINLNGIYSANEFL---TRINLMKAYKFPEYDTPIVVGKRVIV 298
            AI ++ G+  P+ L +PG +L+G++ A EFL   T+  L   ++   Y +    GK+V+V
Sbjct: 1944 AIVLAVGSTKPRDLPVPGRDLSGVHFAMEFLHANTKSLLDSNHEDGNYIS--AKGKKVVV 2001

Query: 299  IGAGNTAMDAARSALRLGAEVIIAYRRGKEDMTA-----------RIEEVQHAKEEG-VK 346
            IG G+T  D   +++R G   I+      +  +            R+  + +  +E   K
Sbjct: 2002 IGGGDTGTDCIGTSIRHGCTNIVNLELLPQPPSTRAPGNPWPQWPRVFRIDYGHQEATTK 2061

Query: 347  F-----MFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGK---RKIVGTGEYITVEAD 398
            F      + V    FIGD+ G VK +  E ++   E+D+ G+   ++I G+ E I  EAD
Sbjct: 2062 FGKDPRTYEVLTKRFIGDDNGNVKGL--ELVRVSWEKDETGRFQFKEIEGSEEII--EAD 2117

Query: 399  TVIIAIGQTPNKILWRTTPGLKVREDGTIIVD-ENLMTSIPGVFAGGDAIRGEATVILAM 457
             V +A+G    +       GL+         +     T++ GVFA GD  RG++ V+ A+
Sbjct: 2118 LVFLAMGFLGPEPTLAEKLGLECDNRSNFKAEYGRFSTTVEGVFAAGDCRRGQSLVVWAI 2177

Query: 458  GDGRKAAKAIHEYLSKS 474
             +GR+AA  + ++L+K+
Sbjct: 2178 SEGRQAADQVDKFLTKT 2194


>pir||F82085 glutamate synthase, small chain VC2374 [imported] - Vibrio cholerae
           (group O1 strain N16961) >gi|9656944|gb|AAF95517.1|
           (AE004307) glutamate synthase, small subunit [Vibrio
           cholerae]
           Length = 489
           
 Score =  198 bits (499), Expect = 9e-50
 Identities = 139/473 (29%), Positives = 239/473 (50%), Gaps = 37/473 (7%)

Query: 16  PVERVRDFNEVNLGYTWELAL-REAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRD 74
           P ER+++  E  L   +   + ++A RC+ C   +  C  GCP+   IP F  A+     
Sbjct: 20  PAERIKNNKEFVLNQEFGKKINQQASRCMDCGVPF--CHNGCPIGNIIPEFNDAVY---- 73

Query: 75  NPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVADYAR 134
             R +  EA  ++ + N+ P  TGRVCP    CE  CV+G   DPI I  +E+ + + A 
Sbjct: 74  --RDSWEEAWNILSSTNNFPEFTGRVCPAP--CETACVLGINQDPITICNIEKTIVERAY 129

Query: 135 EHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLA 194
           + G              R GK VA+IG+GPAGL  A +L   G+ VT+FE   + GG+L 
Sbjct: 130 QEGYAKPKTPRS-----RTGKTVAIIGSGPAGLAAAEQLNAAGHSVTVFERDEKVGGLLR 184

Query: 195 YGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKL 254
           +GIP+F+L  +++ +++  ++  GV+   +  +G  +   +L +E+DA+ ++ G+  P+ 
Sbjct: 185 FGIPDFKLGMDVIDRKINLMEQAGVKFVVNAHIGVDINAQQLRQEFDAVLLTGGSTVPRD 244

Query: 255 LKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALR 314
           L IPG +L G+Y A +FL + N        + +     GK V+VIG G+T  D   ++ R
Sbjct: 245 LSIPGRDLKGVYFAMQFLAQNNRRANGMDLKGEEIHAKGKHVVVIGGGDTGSDCVGTSNR 304

Query: 315 LGAEVI-------IAYRRGKEDMT----ARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGR 363
            GA  I       I  ++   +M       I     + EEG +  + +   EFIG+E+G 
Sbjct: 305 HGAASITQVEIMPIPPQKRPVNMPWPQYPMILRTSTSHEEGCERHWNILTKEFIGNEQGE 364

Query: 364 VKAVKFEKM--KPLEERDKRGKRKIVGTGEYITVEADTVIIAIG---QTPNKILWRTTPG 418
           V  ++   +  K     ++    ++VG+     +  D   +A+G     P+ +L +   G
Sbjct: 365 VTGLRIADIVWKDAAPGERPSFDEVVGSER--VIPCDMAFLAMGFLHPEPHGVLAQL--G 420

Query: 419 LKVREDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
           +K+ E G  +  ++  T+  GVFA GD   G++ V+  + +GR+ A+A+  +L
Sbjct: 421 IKLDERGN-VATQDFATNQKGVFAAGDMRTGQSLVVRCINEGRECARAVDTFL 472


>sp|Q12680|GLT1_YEAST GLUTAMATE SYNTHASE [NADPH] PRECURSOR (NADPH-GOGAT)
            >gi|1370295|emb|CAA61505.1| (X89221) glutamate synthase
            (NADPH) [Saccharomyces cerevisiae]
            Length = 2144
            
 Score =  198 bits (498), Expect = 1e-49
 Identities = 144/488 (29%), Positives = 241/488 (48%), Gaps = 35/488 (7%)

Query: 4    LIKERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIP 63
            +I +R     R P  RV D+ E     T + A  +  RC+ C   +     GCP++  IP
Sbjct: 1644 MIHKRRHETHRDPRTRVNDWKEFTNPITKKDAKYQTARCMDCGTPFCLSDTGCPLSNIIP 1703

Query: 64   GFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIG 123
             F   L +N+       + AL  +   N+ P  TGRVCP    CEG C +G + DP+ I 
Sbjct: 1704 KFNELLFKNQ------WKLALDKLLETNNFPEFTGRVCPAP--CEGACTLGIIEDPLGIK 1755

Query: 124  KLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIF 183
             +ER + D A + G      ++      R G  V VIG+GPAGL CA  L + G+ VT++
Sbjct: 1756 SVERIIIDNAFKEG-----WIKPCPPSTRTGFTVGVIGSGPAGLACADMLNRAGHTVTVY 1810

Query: 184  EALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAI 243
            E     GG+L YGIP  +L K I+++ +  L   G++  T+  +G+T+++ EL  +++A+
Sbjct: 1811 ERSDRCGGLLMYGIPNMKLDKAIVQRRIDLLSAEGIDFVTNTEIGKTISMDELKNKHNAV 1870

Query: 244  FISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGN 303
              + G+  P+ L I G  L  I  A + L         K  E     + GK+VIV+G G+
Sbjct: 1871 VYAIGSTIPRDLPIKGRELKNIDFAMQLLESNTKALLNKDLEIIREKIQGKKVIVVGGGD 1930

Query: 304  TAMDAARSALRLGAEVIIAY--------RRGKED---MTARIEEVQHAKEEGVKFMFFVN 352
            T  D   +++R GA  ++ +         R K++      R+  V +   E VK  +  +
Sbjct: 1931 TGNDCLGTSVRHGAASVLNFELLPEPPVERAKDNPWPQWPRVMRVDYGHAE-VKEHYGRD 1989

Query: 353  P-------VEFIGDEEGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIG 405
            P        EFIG++EG V A++  +++  + +    +   +   E I  EAD +++++G
Sbjct: 1990 PREYCILSKEFIGNDEGEVTAIRTVRVEWKKSQSGVWQMVEIPNSEEI-FEADIILLSMG 2048

Query: 406  QTPNKILWRTTPGLKVREDGTIIVDENLMTSIPG--VFAGGDAIRGEATVILAMGDGRKA 463
                +++      +K    GTI   ++   SI G   FA GD  RG++ ++ A+ +GRK 
Sbjct: 2049 FVGPELINGNDNEVKKTRRGTIATLDDSSYSIDGGKTFACGDCRRGQSLIVWAIQEGRKC 2108

Query: 464  AKAIHEYL 471
            A ++ ++L
Sbjct: 2109 AASVDKFL 2116


>dbj|BAB05448.1| (AP001513) glutamate synthase (small subunit) [Bacillus halodurans]
           Length = 495
           
 Score =  198 bits (498), Expect = 1e-49
 Identities = 152/496 (30%), Positives = 239/496 (47%), Gaps = 49/496 (9%)

Query: 7   ERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIK--------GCPV 58
           +R   P++ P ER +++ E  L        ++  RC+ C   +             GCPV
Sbjct: 11  KRETPPKKDPFERSKNWQEFTLLMPESALRQQGARCMDCGVPFCQTGTSMDGSGEIGCPV 70

Query: 59  NIDIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGD 118
              IP +      N    R   +EAL+ +   N+ P  TGRVCP    CEG C V    D
Sbjct: 71  YNLIPEW------NDLVYRGHWKEALERLHKTNNFPEFTGRVCPAP--CEGSCTVAISDD 122

Query: 119 PINIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGY 178
            + I  +E  + +   + G    ++    R   R GK+VAV+G+GPAGL  AA+L K G+
Sbjct: 123 AVAIKSMEFHIVERGFQEGW---IVPNPPRS--RTGKKVAVVGSGPAGLAAAAQLNKAGH 177

Query: 179 EVTIFEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLE 238
            VT+FE     GG+L YGIP+ +LP  ++ + +  LK  G+E +T+  +G+ V+  +L +
Sbjct: 178 WVTVFEREDRIGGLLTYGIPDVKLPYHVVERRINLLKEEGIEFRTNVEIGKDVSAKQLKD 237

Query: 239 EYDAIFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIV--VGKRV 296
           ++DA+ + TGA  P+ + + G  L GI+ A +FLT  N          D   +   GK V
Sbjct: 238 DFDAVVLCTGATKPRDVNVKGRELKGIHFAMDFLT-ANTKSLLNSNHQDGNYISAKGKHV 296

Query: 297 IVIGAGNTAMDAARSALRLGAEVIIAYRRGKEDMTARIEE-------VQHAKEEGVK--- 346
           +VIG G+T  D   +++R GA+ I  +   +E    R +        + H  E+G K   
Sbjct: 297 VVIGGGDTGADCITTSVRHGAKSITQFDINREKSNERPDNNPWPLFPIVHTVEDGHKEAA 356

Query: 347 -------FMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADT 399
                    + V   +F+GD EG VK +    ++     D   K ++   G      AD 
Sbjct: 357 AVYGKDPRAYQVMTTKFVGDAEGHVKEIHTISVETTVHPD-GSKTRVEIPGTEKVWPADL 415

Query: 400 VIIAIGQT-PNKILWRTTPGLKVREDGTIIVDE---NLMTSIPGVFAGGDAIRGEATVIL 455
           V +A+G T P + L R    L++  D    +        TS+ GVFA GD  RG++ V+ 
Sbjct: 416 VFLAVGFTGPEEQLVRE---LELETDTRSNIKAEYGKYETSLEGVFAAGDNRRGQSLVVW 472

Query: 456 AMGDGRKAAKAIHEYL 471
           A+ +GR+AA+   +YL
Sbjct: 473 AIHEGREAARECDKYL 488


>sp|Q18164|DPYD_CAEEL PROBABLE DIHYDROPYRIMIDINE DEHYDROGENASE [NADP+] (DPD)
           (DIHYDROURACIL DEHYDROGENASE) (DIHYDROTHYMINE
           DEHYDROGENASE) >gi|7451559|pir||T15616 hypothetical
           protein C25F6.3 - Caenorhabditis elegans
           >gi|1049458|gb|AAA80433.1| (U39742) coded for by C.
           elegans cDNA yk28e9.3; coded for by C. elegans cDNA
           yk28e9.5; coded for by C. elegans cDNA yk28h9.3; coded
           for by C. elegans cDNA yk28h9.5; coded for by C. elegans
           cDNA yk40e4.5; coded for by C. elegans cDNA yk5h3.5;
           weakly si>
           Length = 1084
           
 Score =  197 bits (496), Expect = 2e-49
 Identities = 152/451 (33%), Positives = 249/451 (54%), Gaps = 30/451 (6%)

Query: 35  ALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDNPRKAVREALKVIWACNSLP 94
           AL+EA RCL+C    APC K CP  +D+  FI ++        K    A + I + N L 
Sbjct: 112 ALKEAMRCLKCAD--APCQKSCPTQLDVKSFITSISN------KNYYGAARQILSDNPLG 163

Query: 95  AITGRVCPQEDQCEGVC-VVGKVGDPINIGKLERFVADYAREHGIDDELLMEEIRGIKR- 152
              G +CP  D C G C +       INIG L+++  D  ++  +  +++ +E+R  +  
Sbjct: 164 LTCGMICPTSDLCVGSCNLQASEEGAINIGGLQQYACDVFKQMNVR-QIVSKEVRENRNA 222

Query: 153 -NGKRVAVIGAGPAGLTCAAELAKMGY-EVTIFEALHEPGGVLAYGIPEFRLPKEILRKE 210
            + ++VA+IG GPA ++CA+ LA++GY ++TI+E     GG+ +  IP+FRLP +++  E
Sbjct: 223 SHKEQVALIGCGPASISCASFLARLGYTDITIYEKRAYIGGLSSAEIPQFRLPYDVVDFE 282

Query: 211 LKKLKFLGVEIKTDHIVGRT-VTIPELLEE-YDAIFISTGAGTPKLLKI-PGINL-NGIY 266
           ++  + +GV+I+T+  +G+  +T+ +L E+   A+FI  G   PK+  +  G+ + NG Y
Sbjct: 283 IQLARDIGVQIETNRPLGKDGLTLAKLKEQGAAAVFIGIGNPEPKIDPLFEGLTIENGFY 342

Query: 267 SANEFLTRI-NLMKAYKFPEYDTPI-VVGKRVIVIGAGNTAMDAARSALRLGA-EVIIAY 323
           ++  +L  +    K        TP+  +  RV+V+GAG+TAMD A SALR GA  V IA+
Sbjct: 343 TSKNYLPAVAAASKPGMCGCKRTPLPTMRGRVVVLGAGDTAMDCATSALRCGASRVTIAF 402

Query: 324 RRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGK 383
           R+G   + A  EE++ AKEE  +F+ F  P + I  ++GR+ +++F K     E+D  GK
Sbjct: 403 RKGFTGIRAVPEEMEAAKEEKCEFLPFSAPRK-INVKDGRIVSIEFNK----TEQDDNGK 457

Query: 384 RKIVGTGEYITVEADTVIIAIGQT--PNKILWRTTPGLKVREDGTIIVDENL-MTSIPGV 440
                  + + ++ D VI A G T   + +L    P  ++ + G I VD     TS   V
Sbjct: 458 -WYEDEEQIVILKCDYVISAFGSTLKEDAVLSALQP-CQLNKWGGIEVDSTTQQTSEKWV 515

Query: 441 FAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
           FAGGD      T + ++ DG+ AA  +H Y+
Sbjct: 516 FAGGDVAGVAETTVESVNDGKIAAWNMHRYI 546


>pir||T49818 probable glutamate synthase (NADPH) [imported] - Neurospora crassa
            >gi|8218225|emb|CAB92626.1| (AL356815) probable glutamate
            synthase (NADPH) [Neurospora crassa]
            Length = 2116
            
 Score =  193 bits (486), Expect = 3e-48
 Identities = 145/495 (29%), Positives = 240/495 (48%), Gaps = 64/495 (12%)

Query: 14   RSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENR 73
            R P  RV+D+ E++     +    ++ RC+ C   +     GCP++  IP +   + + +
Sbjct: 1628 RKPATRVKDWAELSQRLDEDELKYQSARCMDCGVPFCQSDSGCPISNIIPKWNELVFQGQ 1687

Query: 74   DNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVADYA 133
                   R+AL  +   N+ P  TGRVCP    CEG CV+G    P+ I  +E  + D  
Sbjct: 1688 ------WRDALNRLLMTNNFPEFTGRVCPAP--CEGACVLGINEQPVGIKSIECAIIDRG 1739

Query: 134  REHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVL 193
             E G     ++ E   I R GK VA+IG+GPAGL  A +L K G+ VT++E     GG+L
Sbjct: 1740 FEMG----WMVPEPPKI-RTGKNVAIIGSGPAGLAAADQLNKAGHNVTVYERADRLGGLL 1794

Query: 194  AYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPK 253
             YGIP  +L K I+++    +   GV+ KT   +G  +T+ +L ++ DA+ I+TGA   +
Sbjct: 1795 MYGIPNMKLDKRIVKRRTDFMAAEGVQFKTGVAIGEDITLVDLKKQNDAVIIATGATVAR 1854

Query: 254  LLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVG--KRVIVIGAGNTAMDAARS 311
             L I   NL GI+ A EFL + N          D   +    K VIVIG G+T  D   +
Sbjct: 1855 DLPIKNRNLEGIHFAMEFLHK-NTKSLLDSELADGSYISAKDKHVIVIGGGDTGNDCIGT 1913

Query: 312  ALRLGAEVIIAYR--------RGKED---MTARIEEVQHAKEEGVKFM------FFVNPV 354
            ++R GA+ +I +         RG+++      R+  V +  +E  +        + +   
Sbjct: 1914 SVRHGAKSVINFELLPKPPPARGRDNPWPQWPRVYRVDYGHDEVKQHTGKDPREYCIMSE 1973

Query: 355  EFIGDEEGRVKAVKFEKMKPLEERDKR-GKRKIVGTGEYITVEADTVIIAIG-------- 405
            EF+ D  G+V+ +   +++  +        +KI G+ ++    AD V++++G        
Sbjct: 1974 EFVDDGNGKVRGINTIRVEWTKSASGGWDMKKIEGSQQFF--PADLVLLSMGFLGPEARV 2031

Query: 406  ------QTPNKILWRTTPGLKVREDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMGD 459
                  + P K + +T PG                T++ GVFA GD  RG++ ++  + +
Sbjct: 2032 LGDEIEKDPRKNV-KTPPG-------------KYSTNVEGVFAAGDCRRGQSLIVWGINE 2077

Query: 460  GRKAAKAIHEYLSKS 474
            GR+AA+ +  YL KS
Sbjct: 2078 GRQAAREVDLYLEKS 2092


>pir||T24629 glutamate synthase (NADH) (EC 1.4.1.14) precursor [similarity] -
            Caenorhabditis elegans >gi|3879588|emb|CAA90070.1|
            (Z49889) contains similarity to Pfam domain: PF00070
            (Pyridine nucleotide-disulphide oxidoreductase),
            Score=64.4, E-value=9.7e-19, N=3; PF01493 (Domain of
            unknown function), Score=261.9, E-value=2.8e-75, N=1;
            PF01645 (Conserved region in glutamate synt>
            >gi|3880576|emb|CAA90032.1| (Z49868) contains similarity
            to Pfam domain: PF00070 (Pyridine nucleotide-disulphide
            oxidoreductase), Score=64.4, E-value=9.7e-19, N=3;
            PF01493 (Domain of unknown function), Score=261.9,
            E-value=2.8e-75, N=1; PF01645 (Conserved region in
            glutamate synt>
            Length = 2207
            
 Score =  191 bits (480), Expect = 2e-47
 Identities = 148/484 (30%), Positives = 237/484 (48%), Gaps = 43/484 (8%)

Query: 14   RSPVERVRDFNEVNLGYTWELA---LRE-AERCLQCPKEYAPCIKGCPVNIDIPGFIRAL 69
            R P ER+ D++EV   Y +E     +RE A RC+ C   +     GCP+   IP +    
Sbjct: 1718 RDPKERLNDWDEV---YDFEAVRSNIREQAARCMDCGVPFCQGHSGCPLGNIIPKW---- 1770

Query: 70   RENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFV 129
              N    +K  R+AL+ +   N+ P  TGRVCP    CEG C +G     + I  +E  +
Sbjct: 1771 --NDFVFKKNWRQALEQLLQTNNFPEFTGRVCPAP--CEGACTLGIGSPAVTIKSIECAI 1826

Query: 130  ADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEP 189
             DYA   G      M+  +     GKR+A+IG+GP+GL  AA+L K+G+ V ++E  +  
Sbjct: 1827 IDYAFMQG-----WMKPCKPAFNTGKRIAIIGSGPSGLGAAAQLVKVGHTVVVYERKNRV 1881

Query: 190  GGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGA 249
            GG+L YGIP  +L K ++ + +  L+  GV   T+  +G+ V    LL+E DAI + TG+
Sbjct: 1882 GGLLRYGIPTMKLDKFVVDRRVSLLEQEGVRFLTNTEIGKHVPADFLLKENDAIIVCTGS 1941

Query: 250  GTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAA 309
             T + L + G +  G+  A E+L +    +A     ++      K+VI++G G+TA D  
Sbjct: 1942 TTARDLNVEGRDAKGVCFAMEYLEKSQRRRAGDDVSWEGLDPANKKVIILGGGDTATDCI 2001

Query: 310  RSALRLGAEVIIAYRRGKEDMTAR-----------IEEVQHAKEEGVKF------MFFVN 352
             ++ RLG + + A+    +    R           I  V +  EE  +        + V+
Sbjct: 2002 ATSNRLGCKTVGAFEILPQPGPNRKPENPWPEWPLIFRVDYGHEEAKEMTGSDPRTYSVS 2061

Query: 353  PVEFI--GDEEGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYI-TVEADTVIIAIGQT-P 408
               F+   +  G       E +    E+D +G  K++   E I T+E D  I+A+G   P
Sbjct: 2062 TKRFLTTTNAAGITVLTGLEIVDVEWEKDDKGAWKLIEKNETIRTIECDLCILAMGFVGP 2121

Query: 409  NKILWRTTPGLKVREDGTIIVDENLMTS-IPGVFAGGDAIRGEATVILAMGDGRKAAKAI 467
             K +      LK      I+  ++   S +  VFA GD  RG++ V+ A+ +GR+AA+ +
Sbjct: 2122 EKSVIEQL-NLKTDPRSNILTPKDKYDSDVAKVFAAGDCRRGQSLVVWAIHEGRQAARQV 2180

Query: 468  HEYL 471
             EYL
Sbjct: 2181 DEYL 2184


>gb|AAD41676.1|AF082880_2 (AF082880) glutamate synthase small subunit [Clostridium
           acetobutylicum]
           Length = 490
           
 Score =  189 bits (476), Expect = 5e-47
 Identities = 142/487 (29%), Positives = 240/487 (49%), Gaps = 45/487 (9%)

Query: 14  RSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPC-------IKGCPVNIDIPGFI 66
           R P ER++D+ E +     E    +  RC+ C   +          + GCP++  IP + 
Sbjct: 18  REPKERLKDYKEFHQRLPLEKQCIQGARCMDCGVPFCQAGVLFSGMVSGCPLHNLIPEW- 76

Query: 67  RALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLE 126
                N    R     A + +   N  P  TGRVCP    CE  C  G  G  I I + E
Sbjct: 77  -----NDLVYRGKWELAYERLNKTNPFPEFTGRVCPAP--CEAGCTAGLNGPAITIKENE 129

Query: 127 RFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEAL 186
           R + D A E+G      ++    +KR GK+VAVIG+GP+GL  A  L K G++VT+FE  
Sbjct: 130 RSIIDNAFENGF-----VKANTPLKRTGKKVAVIGSGPSGLAVANTLNKCGHKVTVFERS 184

Query: 187 HEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFIS 246
             PGG+L YGIP  +L KE++ + +  +   G++   +  VG      E+L+E+DA+ ++
Sbjct: 185 DRPGGLLMYGIPNMKLDKEVILRRVHLMAEEGIKFVNNANVGDNYDAKEILDEFDAVVLA 244

Query: 247 TGAGTPKLLKIPG-INLNGIYSANEFLTRINLMKAYKFPEYDTPIVVG--KRVIVIGAGN 303
           TGA  P+ L+  G  N+NGI+ A +FL + N          D   +    K VI+IG G+
Sbjct: 245 TGASQPRDLQAEGRDNVNGIHFAVDFL-KANTKSLLDSDHEDNNYISAKDKNVIIIGGGD 303

Query: 304 TAMDAARSALRLGAEVIIAYRRGKEDMTARIE-----------EVQHAKEEGVKFMFFVN 352
           T  D   ++LR G + ++ +    E    R E           +V + +EE ++ ++  +
Sbjct: 304 TGTDCVATSLRHGCKSVVQFEIMGEPAHERTESNPMPEWPKVLKVDYGQEEFIE-LYGKD 362

Query: 353 PVEFI-------GDEEGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIG 405
           P E++        D++G +++V   K++  ++ D          G      A+ +++A+G
Sbjct: 363 PREYLTTVTAVHSDKDGNLESVDTVKVE-WKKGDNGRMFPAHVEGSEKNWPAELILLAMG 421

Query: 406 QTPNKILWRTTPGLKVREDGTIIV-DENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAA 464
            T ++   +   G++  E   +   + + MT++P VFA GDA RG++ V+ A+ +G  A 
Sbjct: 422 FTGSEDYLKNAFGIESDERSNVKAGNVDFMTNVPKVFATGDARRGQSLVVTAISEGIAAG 481

Query: 465 KAIHEYL 471
            A+ ++L
Sbjct: 482 IAVDKFL 488


>pir||G72689 probable glutamate synthase small chain APE0935 - Aeropyrum pernix
           (strain K1) >gi|5104604|dbj|BAA79919.1| (AP000060) 337aa
           long hypothetical glutamate synthase small chain
           [Aeropyrum pernix]
           Length = 337
           
 Score =  183 bits (460), Expect = 4e-45
 Identities = 111/325 (34%), Positives = 179/325 (54%), Gaps = 10/325 (3%)

Query: 154 GKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYGIPEFRLPKEILRKELKK 213
           GK V++IGAGPAGL  A  L   G+EV +++ + EPGG++ +GIP+ R+PK+ +RK +++
Sbjct: 14  GKTVSIIGAGPAGLGAAGFLRCRGHEVVVYDMMPEPGGMMMFGIPDDRIPKDNIRKSVRE 73

Query: 214 LKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSANEFLT 273
           L   G  I  ++ VGR +++ ++++  DA+ I+TG   P+ L  PG +L  +  A ++L 
Sbjct: 74  LVEGGARIILNNKVGRDISLEDIIKASDAVLIATGTWKPRRLGAPGEDLPWVLPAADWLV 133

Query: 274 RINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSAL-----RLGAE-VIIAYRRGK 327
            +++ +    P    P  VG R++V+G G TA DA    L     + G E V+++YRR +
Sbjct: 134 EVHMARYGYLPWAKVP-KVGGRILVVGGGLTAADAVHVPLTYPEFKDGVEKVVLSYRRTR 192

Query: 328 EDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGKRKIV 387
           +    R  E +   + G +      P+ F   EEG  K VKF +M+ L+  D    + + 
Sbjct: 193 DYAPMRKNEFERLIKMGAEAWELTQPIAFY--EEGGRKVVKFVRME-LKASDSGRPKPVP 249

Query: 388 GTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENLMTSIPGVFAGGDAI 447
             G     E D  ++AIG+ P         G+++  DGTI  DEN MT+  GVFA GD  
Sbjct: 250 IEGSEFEAEFDWALLAIGEVPTPPFNNGCCGIELNPDGTIKTDENFMTTRKGVFASGDVR 309

Query: 448 RGEATVILAMGDGRKAAKAIHEYLS 472
            G + +  A+  G  AA+ +H YL+
Sbjct: 310 HGPSLIGKALKSGLDAAQKVHLYLT 334


>gb|AAF46461.2| (AE003446) Reg-3 gene product [Drosophila melanogaster]
           Length = 1031
           
 Score =  182 bits (456), Expect = 1e-44
 Identities = 142/451 (31%), Positives = 231/451 (50%), Gaps = 39/451 (8%)

Query: 35  ALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDNPRKAVREALKVIWACNSLP 94
           AL EA RCL+C    APC K CP  +DI  FI ++        K    A K I++ N L 
Sbjct: 74  ALEEAARCLKCAD--APCQKSCPTQLDIKSFITSIAN------KNFYGAAKAIFSDNPLG 125

Query: 95  AITGRVCPQEDQCEGVC-VVGKVGDPINIGKLERFVADYAREHGIDDELLMEEIRGIKRN 153
              G VCP  D C G C +      PINIG L++F  +  ++ G+      +        
Sbjct: 126 LTCGMVCPTSDLCVGGCNLQASEAGPINIGGLQQFATEVFKKMGVRQRRTPQA--EANPL 183

Query: 154 GKRVAVIGAGPAGLTCAAELAKMGY-EVTIFEALHEPGGVLAYGIPEFRLPKEILRKELK 212
            +++A++G GPA L+CA  LA++GY +VTI+E     GG+ A  IP++RLP + +  E+ 
Sbjct: 184 SQKIALVGGGPASLSCATFLARLGYRDVTIYERRSYLGGLSAAEIPQYRLPIDAVNFEID 243

Query: 213 KLKFLGVEIKTDHIVG-RTVTIPELLEE-YDAIFISTGAGTPKLLKI-PGIN-LNGIYSA 268
            ++ LGV I+T   +G + +TI  LL   +DA+F+  G   PKL  I  G+   NG Y++
Sbjct: 244 LVRDLGVRIETGRSLGTKDLTIQGLLSTGHDAVFVGIGLPEPKLNPIFAGLQPSNGFYTS 303

Query: 269 NEFLTRIN---------LMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGA-E 318
             FL  ++            A   P+      +   VIV+GAG+TA D A SALR GA  
Sbjct: 304 KNFLPLVSDGSKPGLCACKAAAGLPK------LHGNVIVLGAGDTAFDCATSALRCGARR 357

Query: 319 VIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEER 378
           V + +R+G   + A  EEV+ A++E  + + +++P + I  ++G + A++F + +  E  
Sbjct: 358 VFVVFRKGSSGIRAVPEEVELARDERCELLPYLSPRKVI-VKDGLITAMEFCRTEQNEND 416

Query: 379 DKRGKRKIVGTGEYITVEADTVIIAIGQ-TPNKILWRTTPGLKVREDGTIIVDENLMTSI 437
           +      +    +   ++A+ VI A G    ++ +      L+ R +  ++    + +S+
Sbjct: 417 E-----WVEDEEQTQRLKANFVISAFGSGLEDQDVKAALAPLQFRGELPVVDRVTMQSSV 471

Query: 438 PGVFAGGDAIRGEATVILAMGDGRKAAKAIH 468
             VF GGD      T + ++ DG+ AA +IH
Sbjct: 472 KQVFLGGDLAGVANTTVESVNDGKVAAWSIH 502


>pir||D81416 glutamate synthase (NADPH) (EC 1.4.1.13) small chain Cj0009
           [imported] - Campylobacter jejuni (strain NCTC 11168)
           >gi|6967514|emb|CAB72502.1| (AL139074) glutamate
           synthase (NADPH) small subunit [Campylobacter jejuni]
           Length = 481
           
 Score =  181 bits (455), Expect = 1e-44
 Identities = 147/495 (29%), Positives = 242/495 (48%), Gaps = 52/495 (10%)

Query: 7   ERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPC-------IKGCPVN 59
           +R+   + +P ER+ ++ E  +    +    +  RC+ C   +            GCP+N
Sbjct: 11  KRMDFKKIAPKERILNYKEFTIPLDKKEQEVQGGRCMDCGVAFCHTGVMSEGKDVGCPLN 70

Query: 60  IDIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDP 119
             IP +      N    R   +EA + +   N  P  TGRVCP    CE  CV    G  
Sbjct: 71  NLIPEW------NDLVYRSLWKEAYERLDLTNPFPEFTGRVCPAP--CEDSCVCAINGVS 122

Query: 120 INIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYE 179
           ++I   E  + + A +     E L+   +  + NGK++AVIG+GPAGL CA  L  +GY+
Sbjct: 123 VSIKNNELSIIENAFK-----ENLVRVNKPKQYNGKKIAVIGSGPAGLACANTLNSLGYK 177

Query: 180 VTIFEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEE 239
           V++FE   + GG+L YGIP+ +L K I+++ +  LK  G+E K +  +     + +LL+E
Sbjct: 178 VSVFERSDKIGGLLMYGIPDMKLDKSIVQRRVDLLKKSGIEFKVNENIDSKDKVSKLLKE 237

Query: 240 YDAIFISTGAGTPKLLKIPGINLNGIYSANEFLTR--INLMKAYKFPEYDTPIVVGKRVI 297
           +DA+ + TGA  P  L I G  L G+  A +FLT+    L+K  K       +  GK V+
Sbjct: 238 FDALVLCTGASKPIDLDIEGRKLKGVEFALDFLTQNTKTLLKTGK----GADMAKGKNVL 293

Query: 298 VIGAGNTAMDAARSALRLGAEVIIAYRRGKE-----------DMTARIEEVQHAKEEGVK 346
           VIG+G+T++D    A R GA+ I+ + R  +            + A I    +  EE + 
Sbjct: 294 VIGSGDTSVDCIAVATRQGAKSIVRFERSPKRPLQRSQNNPWPLKADIFTTDYGLEEAIA 353

Query: 347 FMFFVNPVE-------FIGDEEGRVKAVKFEKMKPLEERDKRGKR-KIVGTGEYITVEAD 398
            ++  +P E       F+G        V+  +   L+   K GK   +  +    T +AD
Sbjct: 354 -VYGKDPREYQKMTKKFLGKTH-----VEGVEANDLKREFKEGKAINVEISNSKKTYKAD 407

Query: 399 TVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENLMTSIPGVFAGGDAIRGEATVILAMG 458
            V++A+G +  +       G+K+ E   I   EN  T+   +FA GDA +G++ V+ A+ 
Sbjct: 408 LVLLAMGFSGCEEAISKNFGVKLDEKNNIST-ENFQTTHKKIFACGDARKGQSLVVWAIK 466

Query: 459 DGRKAAKAIHEYLSK 473
           DG + A ++H+ L+K
Sbjct: 467 DGIECALSLHQNLAK 481


>pir||T28635 glutamate synthase (NADH) (EC 1.4.1.14) - malaria parasite
            (Plasmodium falciparum) >gi|3036869|emb|CAA76602.1|
            (Y17045) NAD(P)H-dependent glutamate synthase [Plasmodium
            falciparum]
            Length = 3097
            
 Score =  175 bits (439), Expect = 1e-42
 Identities = 132/413 (31%), Positives = 207/413 (49%), Gaps = 47/413 (11%)

Query: 7    ERVPTPERSPVERVRDFNEVNLGYTWELALR------EAERCLQC--PKEYAPCIKG--C 56
            ER+  P +    RV D++E+ +    +  L       +A RC+ C  P  + P   G  C
Sbjct: 2509 ERLSHPLKDISSRVLDYSEITVPINVKSKLHNQLLKTQASRCVDCGTPTCHYPNSSGGGC 2568

Query: 57   PVNIDIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKV 116
            P+   I  +   + EN        ++AL+ +   N+ P ITGRVCP    CE  CV+   
Sbjct: 2569 PLGNRIFDWNNLVYENE------WKKALERLLDTNNFPEITGRVCPAP--CEDACVLSIN 2620

Query: 117  GDPINIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKM 176
               ++I  +E  + +Y    G   + +   I  I R GK+VA++G+GPAGLT A +L K 
Sbjct: 2621 EKAVSIKFIELSIIEY----GFIKKWIQPMIP-ISRTGKKVAIVGSGPAGLTAAQQLNKA 2675

Query: 177  GYEVTIFEALHEPGGVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPEL 236
            G+EVT+FE     GG+L  GIP  RL K+IL + L  +K  G+ +K +  VG  +T+ +L
Sbjct: 2676 GHEVTVFEKDEYFGGLLMNGIPNVRLDKKILERRLILMKKEGILMKNNVNVGVDITLSDL 2735

Query: 237  LEEYDAIFISTGAGTPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVG-KR 295
            ++EYDAI ++TG   P+ L IPG NLN IY A +FLT   +         D  I V  K 
Sbjct: 2736 VKEYDAILLATGYKIPRKLDIPGANLNNIYFAMDFLTSCQISLTKSDMTDDNYIDVSEKH 2795

Query: 296  VIVIGAGNTAMDAARSALRLGAEVIIAYRRGKEDMTARIEE-----------VQHAKEEG 344
            VI++G G TA+D    A+R+GA  ++ + R +E +     E           V+++ EE 
Sbjct: 2796 VIILGGGKTAVDCISLAIRMGASSVLQFTR-QEILPMNTSEYWWPGLKNIFKVEYSHEEA 2854

Query: 345  VKFM------FFVNPVEFIGDEE-----GRVKAVKFEKMKPLEERDKRGKRKI 386
            +         F V  +EFI   +       ++A++ +  K L+   K+  + +
Sbjct: 2855 IVIQGRDPREFCVRSLEFIPSNKDPKRVSGIRAIRVKLKKNLKSEMKQNNKML 2907


>gi|11421673 dihydropyrimidine dehydrogenase [Homo sapiens]
           Length = 465
           
 Score =  165 bits (413), Expect = 1e-39
 Identities = 135/404 (33%), Positives = 220/404 (54%), Gaps = 29/404 (7%)

Query: 86  VIWACNSLPAITGRVCPQEDQCEGVCVVGKVGD-PINIGKLERFVADYAREHGID---DE 141
           +I++ N L    G VCP  D C G C +    + PINIG L++F  +  +   I    + 
Sbjct: 1   MIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMSIPQIRNP 60

Query: 142 LLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGY-EVTIFEALHEPGGVLAYGIPEF 200
            L    +  +    ++A+ GAGPA ++CA+ LA++GY ++TIFE     GG+    IP+F
Sbjct: 61  SLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQF 120

Query: 201 RLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPEL----LEE--YDAIFISTGAGTP-K 253
           RLP +++  E++ +K LGV+I    I G+++++ E+    L+E  Y A FI  G   P K
Sbjct: 121 RLPYDVVNFEIELMKDLGVKI----ICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPEPNK 176

Query: 254 LLKIPGINLN-GIYSANEFLTRINLMKAYKFPEYDTPI-VVGKRVIVIGAGNTAMDAARS 311
                G+  + G Y++ +FL  +            +P+  +   VIV+GAG+TA D A S
Sbjct: 177 DAIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCACHSPLPSIRGVVIVLGAGDTAFDCATS 236

Query: 312 ALRLGA-EVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFE 370
           ALR GA  V I +R+G  ++ A  EE++ AKEE  +F+ F++P + I  + GR+ A++F 
Sbjct: 237 ALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVI-VKGGRIVAMQFV 295

Query: 371 KMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQ--TPNKILWRTTPGLKVREDGTII 428
           +     E+D+ GK       + + ++AD VI A G   +  K+    +P +K    G   
Sbjct: 296 R----TEQDETGKWN-EDEDQMVHLKADVVISAFGSVLSDPKVKEALSP-IKFNRWGLPE 349

Query: 429 VD-ENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
           VD E + TS   VFAGGD +    T + ++ DG++A+  IH+Y+
Sbjct: 350 VDPETMQTSEAWVFAGGDVVGLANTTVESVNDGKQASWYIHKYV 393


>dbj|BAA75930.1| (AB024708) glutamine 2-oxoglutarate aminotransferase small subunit
           [Corynebacterium glutamicum]
           Length = 506
           
 Score =  161 bits (404), Expect = 1e-38
 Identities = 144/501 (28%), Positives = 232/501 (45%), Gaps = 77/501 (15%)

Query: 12  PERSPVE-RVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALR 70
           P   PV  R+ D++EV           +A RC+ C   +  C +GCP+   IP +   +R
Sbjct: 15  PAHRPVPLRLMDYSEVYEKAPAGQIEEQAARCMDCGVPF--CHEGCPLGNIIPEWNDLVR 72

Query: 71  ENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVA 130
           + R       +EA   + A N+ P  TGR+CP    CEG CV+G   D + I  +E  + 
Sbjct: 73  QGR------WKEAYDRLHATNNFPEFTGRLCPAP--CEGACVLGINDDSVTIKNVELEIV 124

Query: 131 DYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPG 190
           + A   G      ++ +      G  VAV+G+GPAGL  A +L + G+ VT+FE     G
Sbjct: 125 EKAFREG-----WVQPVVASMSTGLSVAVVGSGPAGLAAAQQLTRAGHSVTVFERDDRLG 179

Query: 191 GVLAYGIPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAG 250
           G++ YG+PE+++    + + +++++  G    T   VG +    E L  +DAI ++TG  
Sbjct: 180 GLMRYGVPEYKMENRWIDRRIEQMEAEG----TTFQVGTSPRAAE-LALFDAILLATGTP 234

Query: 251 TPKLLKIPGINLNGIYSANEFLTRINLMKAYKFPEYD---TPI-VVGKRVIVIGAGNTAM 306
             + L +PG +LNGI++A ++LT  N     +  E D   +PI   GK+V++IG G+T  
Sbjct: 235 VARELSVPGHDLNGIHAAMDYLTAQN-----RINEGDGEVSPINAKGKKVVIIGGGDTGT 289

Query: 307 DAARSALRLGAEVI--------IAYRRGKE---DMTARIEEVQHAKEEGVKFM------- 348
           D   +ALR GAE +          ++R       M   +     A EEG   +       
Sbjct: 290 DCFGTALRQGAESVTQFDIRPRAPFQRADSTPWPMYPNLFRTATAHEEGEYIITGDESAD 349

Query: 349 --------------------FFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGKRKIVG 388
                               F VN VEF G+  G V  +   +++ +      GKR+ + 
Sbjct: 350 EIAALGLAERAAGSTLGERKFAVNTVEFHGN-NGHVTGLTGNQIRVV-----NGKREPI- 402

Query: 389 TGEYITVEADTVIIAIGQT-PNKILWRTTPGLKVREDGTIIVDENLMTSIPG-VFAGGDA 446
            G     EAD V++A+G T   +       G+   + G I+ D    +     V+  GD 
Sbjct: 403 EGTEFPFEADLVLVALGFTGAEQGGLAHELGVGFDDRGRILRDSEYRSPTNSRVYIAGDN 462

Query: 447 IRGEATVILAMGDGRKAAKAI 467
            RG++ ++ A+ +GR  A AI
Sbjct: 463 GRGQSLIVWAIAEGRACAAAI 483


>gb|AAG13082.1| (U84760) DsrL [Allochromatium vinosum]
           Length = 654
           
 Score =  161 bits (402), Expect = 2e-38
 Identities = 138/476 (28%), Positives = 217/476 (44%), Gaps = 70/476 (14%)

Query: 40  ERCLQCPK---EYAPCIKGCPVNIDIPGFIRALRENRDNPRKA--VREALKVIWACNSLP 94
           +R  +CP    +  PC   CP   DI G+++ +R     P+       A +     N  P
Sbjct: 35  DRSHKCPTYVHKTPPCQGSCPSGEDIRGWLQIVRGMEKPPQGMDWQEYAFRRSTDANPFP 94

Query: 95  AITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVADYAREHGIDDELLMEEIRGIKRNG 154
           A+ GRVCP    C+  C   ++ D + I  +E+F+ D A  +G   E    +       G
Sbjct: 95  AMMGRVCPA--PCQDGCNRNELEDFVGINSVEQFIGDTAIANGYTFEAPELD------TG 146

Query: 155 KRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYGIPEFRLPKEILRKELKKL 214
           KR+A++G GPAGL  A +L + G+  TIFEA    GG+  +GIP +R+P++ L  E++++
Sbjct: 147 KRIAIVGGGPAGLAAAYQLRRKGHSCTIFEANDGLGGMFRFGIPGYRVPRDKLDAEIQRI 206

Query: 215 KFLG-VEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSANEFLT 273
             +G VE++    +G  VT+ +L ++YDAI  + G  + + L +PG            +T
Sbjct: 207 LDMGRVEVRLKTRIGTDVTVEQLEKDYDAILWAIGCQSGRGLPVPGWE-----GTPNCVT 261

Query: 274 RINLMKAYKFPEYDTPIVVGKRVIVIGAGNT----------------------------- 304
            +  +KA  F E    +  GK V+ +G G+T                             
Sbjct: 262 GVAFLKA--FNEGRMKVTAGK-VVCVGGGDTSIDVVSVARRLGHVNKSNPNELPETVIRD 318

Query: 305 ---AMDAARSALRLGAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEE 361
              A DAA +A   GAEV +     ++ MTA   EV  A  EGV  +  V PVE I D  
Sbjct: 319 GYVAHDAASAAAAQGAEVTLTSLFTRDKMTASEHEVDDATREGVTILDGVMPVEVIKDAN 378

Query: 362 GRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKV 421
           GR   +K       + R       + GT     +EAD ++ AIGQ  +        GL+ 
Sbjct: 379 GRAIGLKVADCTMTDGR----PTPVEGTER--VLEADLIVSAIGQGGD------LSGLEQ 426

Query: 422 REDGTIIVDENLMTSIPGV---FAGGDAIRGEATVILAMGDGRKAAKAIHEYLSKS 474
            ++G  ++D +    +PG    F  GD IR    +  A+G    AA +I  Y+ ++
Sbjct: 427 LDNGRGLMDSDKFYQVPGKAGHFVAGDIIRPH-LLTTAIGQAWIAADSIDAYVMQA 481


>dbj|BAA83927.1| (AB024555) GLTB [Bacillus halodurans]
           Length = 201
           
 Score = 97.1 bits (238), Expect = 4e-19
 Identities = 68/204 (33%), Positives = 99/204 (48%), Gaps = 21/204 (10%)

Query: 7   ERVPTPERSPVERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIK--------GCPV 58
           +R   P++ P ER +++ E  L        ++  RC+ C   +             GCPV
Sbjct: 11  KRETPPKKDPFERSKNWQEFTLLMPESALRQQGARCMDCGVPFCQTGTSMDGSGEIGCPV 70

Query: 59  NIDIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGD 118
              IP +      N    R   +EAL+ +   N+ P  TGRVCP    CEG C V    D
Sbjct: 71  YNLIPEW------NDLVYRGHWKEALERLHKTNNFPEFTGRVCPAP--CEGSCTVAISDD 122

Query: 119 PINIGKLERFVADYAREHGIDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGY 178
            + I  +E  + +   + G    ++    R   R GK+VAV+G+GPAGL  AA+L K G+
Sbjct: 123 AVAIKSMEFHIVERGFQEGW---IVPNPPRS--RTGKKVAVVGSGPAGLAAAAQLNKAGH 177

Query: 179 EVTIFEALHEPGGVLAYGIPEFRL 202
            VT+FE     GG+L YGIP+ +L
Sbjct: 178 WVTVFEREDRIGGLLTYGIPDVKL 201


>pir||D71016 probable thioredoxin reductase - Pyrococcus horikoshii
           >gi|3257849|dbj|BAA30532.1| (AP000006) 336aa long
           hypothetical thioredoxin reductase [Pyrococcus
           horikoshii]
           Length = 336
           
 Score = 88.2 bits (215), Expect = 2e-16
 Identities = 97/338 (28%), Positives = 144/338 (41%), Gaps = 59/338 (17%)

Query: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAY--------GIPEFRLPKEILR 208
           V +IGAGPAG T A   A+ G +  I     + GG +A         G PE     E+ +
Sbjct: 26  VIIIGAGPAGYTAAIYAARFGLDTIIITK--DLGGNMAITDLIENYPGFPEGISGSELSK 83

Query: 209 KELKKLKFLGVEIKTDHIVG-------------RTVTIPELLEEYDA--IFISTGAGTPK 253
           K   ++K  GVE+  D ++                V      +EY A  I I+ GA  P+
Sbjct: 84  KMYDQVKKYGVEVIIDEVIRIDPAECAYYEGPCNFVVKTANGKEYKAKTIIIAVGA-EPR 142

Query: 254 LLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSAL 313
            L +PG          EF  R     A      D P+ VGK VIV+G GNTA+  A    
Sbjct: 143 KLNVPG--------EKEFTGRGVSYCA----TCDGPLFVGKEVIVVGGGNTALQEALYLH 190

Query: 314 RLGAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMK 373
            +G +V + +RR K      +++    K+ G+  +      E  G    +V++V  + +K
Sbjct: 191 SIGVKVTLVHRRDKFRADKILQD--RFKQAGIPAILNTVVTEIKG--TNKVESVVLKNVK 246

Query: 374 PLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENL 433
                          TGE +  + D V I IG  P K  +    G+   E G I VD  +
Sbjct: 247 ---------------TGETVEKKVDGVFIFIGYEP-KTDFVKHLGI-TDEYGYIPVDMYM 289

Query: 434 MTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
            T +PG+FA GD       + +A+G G  AA +  E++
Sbjct: 290 RTKVPGIFAAGDITNVFKQIAVAVGQGAIAANSAKEFI 327


>pir||D75116 thioredoxin reductase (trxb) PAB0500 - Pyrococcus abyssi  (strain
           Orsay) >gi|5458156|emb|CAB49645.1| (AJ248285)
           thioredoxin reductase (trxB) [Pyrococcus abyssi]
           Length = 345
           
 Score = 83.1 bits (202), Expect = 6e-15
 Identities = 95/338 (28%), Positives = 141/338 (41%), Gaps = 59/338 (17%)

Query: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAY--------GIPEFRLPKEILR 208
           V +IGAGPAG T A   A+ G +  I     + GG +A         G PE     E+ +
Sbjct: 35  VIIIGAGPAGYTAAIYAARFGLDTIIITK--DLGGNMAITDLIENYPGFPEGISGSELAK 92

Query: 209 KELKKLKFLGVEIKTDHIVGRTVTIPELLE-------------EYDA--IFISTGAGTPK 253
           +  + +K  GV++  D +V          E             EY    I I+ GA  P+
Sbjct: 93  RMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGA-EPR 151

Query: 254 LLKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSAL 313
            L +PG          EF  R     A      D P+ VGK VIV+G GNTA+  A    
Sbjct: 152 KLHVPG--------EKEFTGRGVSYCA----TCDGPLFVGKEVIVVGGGNTALQEALYLH 199

Query: 314 RLGAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMK 373
            +G +V + +RR K      +++    K+ G+  +      E  G    +V++V  + +K
Sbjct: 200 SIGVKVTLVHRRDKFRADKILQD--RLKQAGIPTILNTVVTEIRG--TNKVESVVLKNVK 255

Query: 374 PLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENL 433
                          TGE    + D V I IG  P K  +    G+   E G I VD  +
Sbjct: 256 ---------------TGETFEKKVDGVFIFIGYEP-KTDFVKHLGI-TDEYGYIKVDMYM 298

Query: 434 MTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
            T +PG+FA GD       + +A+G G  AA +  E++
Sbjct: 299 RTKVPGIFAAGDITNVFKQIAVAVGQGAIAANSAKEFI 336


>emb|CAB60604.1| (AL132865) cDNA EST yk60c5.5 comes from this gene [Caenorhabditis
           elegans]
           Length = 458
           
 Score = 83.1 bits (202), Expect = 6e-15
 Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 22/175 (12%)

Query: 147 IRGIKRNGK-RVAVIGAGPAGL-TCAAELAKMGYEVTIFEALHEPGGVLAYGI-PEFRLP 203
           ++  K +GK R+A++G+GPAG+  C   L K  + V +FE    P G++ YG+ P+ +  
Sbjct: 17  LKSRKLSGKPRLAIVGSGPAGMFACNGLLRKSNFSVDVFENSPVPFGLVRYGVAPDHQEV 76

Query: 204 KEILR-------KELKKLK-FLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLL 255
           K ++        K  ++LK F  V I      GR +T  EL   YDA+ ++ G+   + L
Sbjct: 77  KNVINTFDAMFEKNRERLKLFCNVNI------GRDITFDELTRGYDAVLLAYGSYKTRTL 130

Query: 256 KIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAAR 310
            IPG + + + S +EF+   N       P   TP +    V+++G GN A+D AR
Sbjct: 131 DIPGSDASNVISGSEFVGWYN-----GVPNASTPDLTTSNVVIVGNGNVALDCAR 180


>emb|CAC12113.1| (AL445066) probable thioredoxin reductase [Thermoplasma
           acidophilum]
           Length = 319
           
 Score = 80.8 bits (196), Expect = 3e-14
 Identities = 90/326 (27%), Positives = 137/326 (41%), Gaps = 46/326 (14%)

Query: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYG--IPEFRLPKEILRKELKKL 214
           V ++GAG AG + A   A+ G+ V I +     GG+ A    +  +   K I+  EL KL
Sbjct: 19  VVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAPLVENYLGFKSIVGSELAKL 77

Query: 215 KF----------LGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNG 264
                        GVE+++         I    + Y A ++    GT    K  G+    
Sbjct: 78  FADHAANYAKIREGVEVRSIKKTQGGFDIETNDDTYHAKYVIITTGTTH--KHLGVKGES 135

Query: 265 IYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGAEV-IIAY 323
            Y      +  +    Y F         GKRV+ IG GN+   AA S       V II Y
Sbjct: 136 EYFGKG-TSYCSTCDGYLFK--------GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEY 186

Query: 324 RRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGK 383
                   A ++E+   K+  + ++      E +GD + +V  VK++             
Sbjct: 187 MPKYMCENAYVQEI---KKRNIPYIMNAQVTEIVGDGK-KVTGVKYKDRT---------- 232

Query: 384 RKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENLMTSIPGVFAG 443
                TGE   +E D V I +G  P     + + G+K+ E G I+VD    TS+PGV+A 
Sbjct: 233 -----TGEEKLIETDGVFIYVGLIPQTSFLKDS-GVKLDERGYIVVDSRQRTSVPGVYAA 286

Query: 444 GDAIRGE-ATVILAMGDGRKAAKAIH 468
           GD   G  A +  A+GDG KAA +++
Sbjct: 287 GDVTSGNFAQIASAVGDGCKAALSLY 312


>sp|O06465|AHPF_XANCH ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F >gi|2098747|gb|AAC45426.1|
           (U94336) alkyl hydroperoxide reductase subunit F
           [Xanthomonas campestris]
           Length = 530
           
 Score = 77.6 bits (188), Expect = 3e-13
 Identities = 62/196 (31%), Positives = 93/196 (46%), Gaps = 26/196 (13%)

Query: 284 PEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGAEVIIAYRRGKEDMTARIEEVQHAK-- 341
           P  D P+  GKRV VIG GN+ ++AA     + A V +     + D   R +EV   K  
Sbjct: 345 PHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVAHVTLV----EFDDKLRADEVLQRKLR 400

Query: 342 -EEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTV 400
               V+ +      E +GD          +K+  L  +D+ G       G+   +E + V
Sbjct: 401 SLHNVRIITSAQTTEVLGDG---------QKVTGLVYKDRTG-------GDIQHIELEGV 444

Query: 401 IIAIGQTPNKILWRTTPGLKVREDGTIIVDENLMTSIPGVFAGGDAIR-GEATVILAMGD 459
            + IG  PN    R T  L  R  G IIVD+   T +PGVFA GDA       +++AMG+
Sbjct: 445 FVQIGLLPNTEFLRGTVALSPR--GEIIVDDRGQTDVPGVFAAGDATTVPYKQIVIAMGE 502

Query: 460 GRKAAKAIHEYLSKSA 475
           G KAA +  ++L +++
Sbjct: 503 GSKAALSAFDHLIRTS 518


>gb|AAD29664.1|AF124757_24 (AF124757) thioredoxin reductase [Zymomonas mobilis]
           Length = 318
           
 Score = 77.6 bits (188), Expect = 3e-13
 Identities = 89/344 (25%), Positives = 143/344 (40%), Gaps = 66/344 (19%)

Query: 156 RVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAY-----GIPEFRLPKE---IL 207
           RV ++G+GPAGLT A   A+ G    + + L +PGG L         P FR P +   ++
Sbjct: 9   RVFILGSGPAGLTAAIYAARAGLNPIVAQGL-QPGGQLTITTEVENFPGFREPIQGPWLM 67

Query: 208 RKELKKLKFLGVEIKTDHIVG--------RTVTIPELLEEYDAIFISTGA-----GTPKL 254
            +   + + +G ++  D I          R +     +   D++ ISTGA     G    
Sbjct: 68  EEMQAQAENVGAKLVWDIITSVDFSQRPYRLMGDGGQVYLADSLIISTGAQARWLGLESE 127

Query: 255 LKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALR 314
             + G  ++   + + F  R                  GK+V+VIG GNTA++ A     
Sbjct: 128 TALRGKGISACATCDGFFFR------------------GKKVVVIGGGNTAVEEALYLTN 169

Query: 315 LGAEVIIAYRRGKEDMTARIEEVQHAK---EEGVKFMFFVNPVEFIGDEEGRVKAVKFEK 371
              EV + +RR     + R E++   +      +K  +     EFI  E+  + AVK + 
Sbjct: 170 HSPEVTLIHRRD----SLRAEKIMQKRLLANPKIKIRWNSEVAEFIAGEDSALSAVKLKD 225

Query: 372 MKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTI-IVD 430
            K               TGE   +E +   IAIG  P   L++    LK+ ++G I +  
Sbjct: 226 TK---------------TGEESLLETEGAFIAIGHKPATELFQ--GHLKLDDEGYIEVTP 268

Query: 431 ENLMTSIPGVFAGGDAI-RGEATVILAMGDGRKAAKAIHEYLSK 473
               TSI G+FA GD + +     + A G G  AA     +L +
Sbjct: 269 GTTQTSIKGIFACGDVMDKHYRQAVTAAGTGCMAALEAERFLGE 312


>dbj|BAB07290.1| (AP001519) thioredoxin reductase (NADPH) [Bacillus halodurans]
           Length = 315
           
 Score = 77.3 bits (187), Expect = 4e-13
 Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 50/335 (14%)

Query: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAY-----GIPEFR--LPKEILRK 209
           V + GAGPAG+T A   ++      + E    PGG +A        P F   L  E+  K
Sbjct: 10  VVIAGAGPAGMTAAVYTSRANLSTVMVER-GVPGGQMANTEDVENYPGFDHILGPELSTK 68

Query: 210 ELKKLKFLGVE-----IKTDHIVGRTVTIPELLEEYDA--IFISTGAGTPKLLKIPGINL 262
             +  K  G E     IK     G    +    +EY A  + ++TGA   KL        
Sbjct: 69  MFEHAKKFGAEYAYGDIKEIIDQGDLKLVKAGNKEYKARAVIVATGAEYKKL-------- 120

Query: 263 NGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGAEVIIA 322
            G+    E   R     A      D     GK ++V+G G++A++ A    R  ++V I 
Sbjct: 121 -GVPGEKELSGRGVSYCAV----CDGAFFKGKELVVVGGGDSAVEEAVYLTRFASKVTII 175

Query: 323 YRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRG 382
           +RR  + + A+    Q A +       + + V+ I   +G+V +V  E  K         
Sbjct: 176 HRR--DQLRAQKILQQRAFDNDKIEFIWDHVVKQINGTDGKVSSVTIEHAK--------- 224

Query: 383 KRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVRED-GTIIVDENLMTSIPGVF 441
                 TGE    + D V I IG  P   L      L +  D G I+ +E + TS+PG+F
Sbjct: 225 ------TGEQQDFKTDGVFIYIGMLP---LNEAVKNLNILNDEGYIVTNEEMETSVPGIF 275

Query: 442 AGGDA-IRGEATVILAMGDGRKAAKAIHEYLSKSA 475
           A GD   +    ++ A GDG  AA+ +  Y+ + A
Sbjct: 276 AAGDVREKSLRQIVTATGDGSLAAQNVQHYIEELA 310


>pir||C75513 probable ferredoxin/ferredoxin--NADP reductase - Deinococcus
           radiodurans (strain R1)
           >gi|6458182|gb|AAF10073.1|AE001908_8 (AE001908)
           ferredoxin/ferredoxin--NADP reductase, putative
           [Deinococcus radiodurans]
           Length = 479
           
 Score = 75.7 bits (183), Expect = 1e-12
 Identities = 97/384 (25%), Positives = 152/384 (39%), Gaps = 94/384 (24%)

Query: 156 RVAVIGAGPAGLTCAAELAKMG---YEVTIFEALHEPGGVLAYGIPEFRLPKEILRKELK 212
           RVAVIG+GP+G+  A  L K      EV +++ L  P G++ YG+    L  + + K  +
Sbjct: 38  RVAVIGSGPSGIYAAEALLKQTEFPVEVDVYDRLPTPYGLVRYGVAPDHLTIKSVTKGFE 97

Query: 213 K------LKFLG-VEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGI 265
           K      ++FLG VE       GR ++  +    YDA+  + GA + + L IPG +L G 
Sbjct: 98  KTLSDPRVRFLGNVEF------GRELSAEDARAHYDAVMYTVGASSDRRLNIPGEDLQGS 151

Query: 266 YSANEFLTRINLMKAYKFPEYDT--PIVVGKRVIVIGAGNTAMDAARSALRLGAE----- 318
            SA EF+   N       P+  T   ++  + V VIG GN A+D +R   +   E     
Sbjct: 152 MSATEFVAWYN-----GHPDAATREMLLSAEGVAVIGVGNVALDVSRILAKTVNELRGSD 206

Query: 319 ----------------VIIAYRRGKEDMTARIEEVQHAKE-EGVKFMFFVNPVEFIGDEE 361
                           + I  RRG        +E++   E  G + +     V+   +EE
Sbjct: 207 IAPHALPVLERSSVKDIYILGRRGPAQAAFTTKELREFGELAGAEPVVKPAEVQLREEEE 266

Query: 362 GR----VKAVKFEKMKPLEERDKRGKRK-------------------------------- 385
            +    VK    E ++    R + GK +                                
Sbjct: 267 AQVTDNVKKKNIEVLRDFAVRTQEGKERRVHLRFLVSPVEILDDGEGRVAGLKVERNRLD 326

Query: 386 ----IVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVRE-DGTIIVDENLMTSIPGV 440
                VGTGEY T+    V+ ++G     +     PG+   +  G I  +E  +   PG 
Sbjct: 327 EQGNAVGTGEYETLPVQLVLRSVGYRGVAL-----PGVPFDDRRGVIPNEEGRVQGRPGE 381

Query: 441 FAGGDAIRGEATVILAMGDGRKAA 464
           +  G   RG + V+   G  RK A
Sbjct: 382 YTAGWIKRGPSGVV---GTNRKDA 402


>pir||A75330 thioredoxin reductase - Deinococcus radiodurans (strain R1)
           >gi|6459771|gb|AAF11534.1|AE002036_5 (AE002036)
           thioredoxin reductase [Deinococcus radiodurans]
           Length = 325
           
 Score = 75.7 bits (183), Expect = 1e-12
 Identities = 96/347 (27%), Positives = 144/347 (40%), Gaps = 76/347 (21%)

Query: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAY--------GIPEFRLPKEILR 208
           V +IG GPAGLT A    +      I E    PGG +A+        G PE     E+ +
Sbjct: 11  VVIIGGGPAGLTAAIYTGRAQLSTLILEK-GMPGGQIAWSEEVENFPGFPEPIAGMELAQ 69

Query: 209 KELKKLKFLGVEIKTDHIVG---------RTVTIPELLEEY--DAIFISTGAGTPKLLKI 257
           +  ++ +  G +++ D + G            T+     EY   A+ ++TGA  P+ L I
Sbjct: 70  RMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGAD-PRKLGI 128

Query: 258 PGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGA 317
           PG +       +   T       YK          GK+V+VIG G+ A++      +   
Sbjct: 129 PGEDNFWGKGVSTCATCDGFF--YK----------GKKVVVIGGGDAAVEEGMFLTKFAD 176

Query: 318 EVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNP-VEFIGD---EE----GRVKAVKF 369
           EV + +RR     T R  +V  A+        F NP ++FI D   EE      V  VK 
Sbjct: 177 EVTVIHRRD----TLRANKVAQARA-------FANPKMKFIWDTAVEEIQGADSVSGVKL 225

Query: 370 EKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIV 429
             +K               TGE   +  D V I IG  PN    + T  + +R+DG + V
Sbjct: 226 RNLK---------------TGEVSELATDGVFIFIGHVPNTAFVKDT--VSLRDDGYVDV 268

Query: 430 DENLMTSIPGVFAGGDA----IRGEATVILAMGDGRKAAKAIHEYLS 472
            + + T+IP +FA GD      R  AT   ++G G +AA      L+
Sbjct: 269 RDEIYTNIPMLFAAGDVSDYIYRQLAT---SVGAGTRAAMMTERQLA 312


>sp|P52213|TRXB_CLOLI THIOREDOXIN REDUCTASE (TRXR) >gi|2117556|pir||S63990 thioredoxin
           reductase (NADPH) (EC 1.6.4.5) - Clostridium litorale
           >gi|1171125|gb|AAC43575.1| (U24268) thioredoxin
           reductase [Clostridium litorale]
           Length = 315
           
 Score = 75.7 bits (183), Expect = 1e-12
 Identities = 90/336 (26%), Positives = 143/336 (41%), Gaps = 50/336 (14%)

Query: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAY--------GIPEFRLPKEILR 208
           +A+IG+GPAGL  A   A+   +  + E +   G ++           +PE   P  I R
Sbjct: 7   IAIIGSGPAGLAAALYGARAKMKTLLLEGMKVGGQIVITHEVANYPGSVPEATGPSLIGR 66

Query: 209 KELKKLKFLGVEIKTDHIVGRTVT-----IPELLEEYDA--IFISTGAGTPKLLKIPGIN 261
            E ++++  G E   D+IV    T     +     EY A  + ++TGA +PKL   PG  
Sbjct: 67  ME-EQVEEFGAERVMDNIVDVDFTDKIKVLKGAKGEYKAKAVIVATGA-SPKLAGCPG-- 122

Query: 262 LNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGAEVII 321
                   + LT   +         D        V VIG G+TA++ A    +   +V I
Sbjct: 123 -------EKELTGKGVSYC---ATCDADFFEDMEVFVIGGGDTAVEEAMFLTKFARKVTI 172

Query: 322 AYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKR 381
            +RR +      I+E +  K E + FM+     E  GD  G V++  F+  +  E     
Sbjct: 173 VHRRAELRAAKSIQE-KAFKNEKLNFMWNTVIEEIKGD--GIVESAVFKNRETGE----- 224

Query: 382 GKRKIVGTGEYITVEADT---VIIAIGQTPNKILWRTTPGLKVREDGTIIVDENLMTSIP 438
                    E++  E D    + + IG  P   L      L++ E G I  D+N+ T++ 
Sbjct: 225 -------VTEFVAPEEDGTFGIFVFIGYDPKSAL--VEGKLELDETGYIPTDDNMKTNVE 275

Query: 439 GVFAGGD-AIRGEATVILAMGDGRKAAKAIHEYLSK 473
           GVFA GD  ++    V+ A  DG  AA    +Y+ +
Sbjct: 276 GVFAAGDIRVKSLRQVVTATADGAIAAVQAEKYIEE 311


>gb|AAC97377.1| (AF107264) glutamate synthase small subunit [Rhizobium etli]
           Length = 471
           
 Score = 75.7 bits (183), Expect = 1e-12
 Identities = 52/174 (29%), Positives = 79/174 (44%), Gaps = 14/174 (8%)

Query: 18  ERVRDFNEVNLGYTWELALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDNPR 77
           +R+R F E  +  +     ++A RC+ C   Y     GCPV+  IP +   +  N     
Sbjct: 29  DRIRHFREFTIPMSDPEVQKQAARCMDCGIPYCHGPTGCPVHNQIPDWNDLVYNNN---- 84

Query: 78  KAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGDPINIGKLERFVADYAREHG 137
                A++ + + N+ P  TGRVCP    CE  C +     P+ I  +E+ +AD A E G
Sbjct: 85  --WEAAIQNLHSTNNFPEFTGRVCPA--PCEEACTLNLEDAPVAIKTVEQAIADKAYELG 140

Query: 138 IDDELLMEEIRGIKRNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGG 191
                 +         GK+VAVIG+GPAG+  A   A    +      + +PGG
Sbjct: 141 -----FIRPQPATVHTGKKVAVIGSGPAGMAAAQHSAAPATKCMSMN-VRQPGG 188


>pir||C75218 probable monooxygenase PAB0184 - Pyrococcus abyssi (strain Orsay)
           >gi|5457703|emb|CAB49194.1| (AJ248283) PROBABLE
           MONOOXYGENASE [Pyrococcus abyssi]
           Length = 407
           
 Score = 75.7 bits (183), Expect = 1e-12
 Identities = 93/345 (26%), Positives = 148/345 (41%), Gaps = 60/345 (17%)

Query: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVL------AYGIPEFR---LPKEIL 207
           VAVIG GPAG+  A +  ++G  V + +     GG+L       +GI  F+      E  
Sbjct: 4   VAVIGGGPAGMAAAIKARELGLSVILIDENDYLGGILPQCIHPGFGIHYFKEELTGPEFA 63

Query: 208 RKELKKLKFLGVEIKTDHIVGRTVTI-----------PELLEEYDAIFISTGAGTPKL-- 254
            K + +L+   VE++T   V   +             P  +EE  A  I   AG  +   
Sbjct: 64  YKLMNRLR--DVEVRTSARVVEIINYSDIEKRLKVISPSGIEEIRAKTIIYAAGARERHA 121

Query: 255 --LKIPGINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSA 312
             + I G  + GI++A E  T   LM  Y        I+ G+ ++++G+G+  +  AR  
Sbjct: 122 FEIGITGDRVAGIFTAGEAQT---LMDIY-------GIMPGREILIVGSGDVGLIMARRF 171

Query: 313 LRLGAEV-----IIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAV 367
              GA V     ++ Y  G          V    +  +        VE  G  +GRV+ V
Sbjct: 172 ALEGARVKAVIELMPYPGG------LARNVMILNDFNIPLYLSHKVVEIRG--KGRVQRV 223

Query: 368 KFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPN-KILWRTTPGLKVREDGT 426
           K  K+           R+I GT  +  V+ DTVII+ G  PN K+L +    +     G 
Sbjct: 224 KIVKV-------DENLREIPGTEFW--VDVDTVIISAGLIPNVKLLTKVGVAIDPSTGGP 274

Query: 427 IIVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
            IV++ L T++PG+F  G+A+     V   +  G  AA+   E++
Sbjct: 275 -IVNDRLETTVPGIFVAGNALVINDLVDYVVEQGELAAEGAKEFI 318


>gi|11499149 thioredoxin reductase (trxB) [Archaeoglobus fulgidus]
           >gi|7427758|pir||A69444 thioredoxin reductase (NADPH)
           (EC 1.6.4.5) - Archaeoglobus fulgidus
           >gi|2649006|gb|AAB89692.1| (AE000995) thioredoxin
           reductase (trxB) [Archaeoglobus fulgidus]
           Length = 300
           
 Score = 75.3 bits (182), Expect = 1e-12
 Identities = 91/331 (27%), Positives = 137/331 (40%), Gaps = 50/331 (15%)

Query: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYGIPEFRLP------KEILRKE 210
           VA+IG GPAGLT A   A+ G +   FE + +P   L+        P       E+L K 
Sbjct: 4   VAIIGGGPAGLTAALYSARYGLKTVFFETV-DPVSQLSLAAKIENYPGFEGSGMELLEKM 62

Query: 211 LKKLKFLGVEIKTDHIV-----GRTVTIPELLEEYD--AIFISTGAGTPKLLKIPGINLN 263
            ++    G E K + +      G T T+     EY+  AI ++TG    +          
Sbjct: 63  KEQAVKAGAEWKLEKVERVERNGETFTVIAEGGEYEAKAIIVATGGKHKEA--------- 113

Query: 264 GIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGAEVIIAY 323
           GI   + F+ R            D     GK+VIV G+G  A++ A     +G EV I  
Sbjct: 114 GIEGESAFIGR----GVSYCATCDGNFFRGKKVIVYGSGKEAIEDAIYLHDIGCEVTIVS 169

Query: 324 RRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRV-KAVKFEKMKPLEERDKRG 382
           R       A    V+  ++ G+   +     + IG   G+V K V + + K         
Sbjct: 170 R--TPSFRAEKALVEEVEKRGIPVHYSTTIRKIIG--SGKVEKVVAYNREKK-------- 217

Query: 383 KRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENLMTSIPGVFA 442
                   E   +EAD + +AIG  P   +     G++    G I VD+   T++ GVFA
Sbjct: 218 --------EEFEIEADGIFVAIGMRPATDVVAEL-GVERDSMGYIKVDKEQRTNVEGVFA 268

Query: 443 GGDAIRGE-ATVILAMGDGRKAAKAIHEYLS 472
            GD        V+ A GDG  AA + ++YL+
Sbjct: 269 AGDCCDNPLKQVVTACGDGAVAAYSAYKYLT 299


>gb|AAG13948.1|AF283287_1 (AF283287) ferrodoxin-NADP(+) reductase [Salvelinus fontinalis]
           Length = 498
           
 Score = 75.3 bits (182), Expect = 1e-12
 Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 6/161 (3%)

Query: 156 RVAVIGAGPAGLTCAAELAKM--GYEVTIFEALHEPGGVLAYGI-PEFRLPKEILRKELK 212
           +V ++G GPAG   A  L K     +V I+E L  P G++ +G+ P+    K ++    +
Sbjct: 45  KVCIVGGGPAGFYTAQHLVKTRTDVQVDIYERLPVPFGLVRFGVAPDHPEVKNVINTFTQ 104

Query: 213 KLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSANEFL 272
             +        +  VG+ VT+ EL E Y A+ +S GA   + + +PG +L G+YSA +F+
Sbjct: 105 TARHARCSFHGNVRVGKDVTVEELQEAYHAVVLSYGAEGNRTMGVPGEDLAGVYSAKDFV 164

Query: 273 TRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSAL 313
              N +   +      P +  +  +++G GN A+D AR  L
Sbjct: 165 GWYNGLPRNRELR---PDLSCETAVILGQGNVALDVARMLL 202


>emb|CAA11546.1| (AJ223781) thioredoxin reductase [Staphylococcus aureus]
           Length = 311
           
 Score = 74.9 bits (181), Expect = 2e-12
 Identities = 88/331 (26%), Positives = 143/331 (42%), Gaps = 50/331 (15%)

Query: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAY-----GIPEFRL--PKEILRK 209
           +A+IGAGPAG+T A   ++   +  + E    PGG +A        P F +    ++  K
Sbjct: 8   IAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMANTEEVENFPGFEMITGPDLSTK 66

Query: 210 ELKKLKFLGV-----EIKTDHIVGRTVTIPELLEEYDA--IFISTGAGTPKLLKIPGINL 262
             +  K  G      +IK+    G    I    +E  A  + I+TGAG  K+  +PG   
Sbjct: 67  MFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAGYKKI-GVPGEQE 125

Query: 263 NGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGAEVIIA 322
            G    +                 D      KR+ VIG G++A++      +   +V I 
Sbjct: 126 LGGRGVSYCAV------------CDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIV 173

Query: 323 YRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRG 382
           +RR  E    RI + +  K + + F++  + ++ I +++G+V +V     K   E     
Sbjct: 174 HRRD-ELRAQRILQDRAFKNDKIDFIWS-HTLKSINEKDGKVGSVTLTSTKDGSEE---- 227

Query: 383 KRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVRED-GTIIVDENLMTSIPGVF 441
                      T EAD V I IG  P   L      L +  D G I+  +++ TS+PG+F
Sbjct: 228 -----------THEADGVFIYIGMKP---LTAPFKDLGITNDVGYIVTKDDMTTSVPGIF 273

Query: 442 AGGDA-IRGEATVILAMGDGRKAAKAIHEYL 471
           A GD   +G   ++ A GDG  AA++   Y+
Sbjct: 274 AAGDVRDKGLRQIVTATGDGSIAAQSTSGYI 304


>pir||T45351 ferredoxin [imported] - Mycobacterium leprae
           >gi|2440106|emb|CAB16679.1| (Z99494) ferredoxin
           [Mycobacterium leprae]
           Length = 555
           
 Score = 74.1 bits (179), Expect = 3e-12
 Identities = 115/475 (24%), Positives = 180/475 (37%), Gaps = 109/475 (22%)

Query: 52  CIKGCPVNIDIPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVC 111
           C+  CPVN         +    D P  A  E L           I    C     C   C
Sbjct: 15  CVFACPVN--------CIHPTPDEPGFATSEMLY----------IDPVACVDCGACVSAC 56

Query: 112 VVGKVGDPINIGKLE----RFVADYAREHGIDDEL-----LMEEIRG----IKRNGKRVA 158
            VG +     +   +       A Y     ID +L     L   I      ++R    VA
Sbjct: 57  PVGAIASDTRLAPKQLPFIEINASYYPARPIDLKLPPTSKLAPVIPAAQVHVRRRPLTVA 116

Query: 159 VIGAGPAGLTCAAEL-AKMGYEVTIFEALHEPGGVLAYGI-PEFRLPKEILR-----KEL 211
           ++G+GPA +  A EL  + G  V +FE L  P G++  G+ P+ +  K++        E 
Sbjct: 117 IVGSGPAAMYAADELLTQPGVWVNVFEKLPTPYGLVRAGLAPDHQNTKKVTELFDRVAEH 176

Query: 212 KKLKF-LGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSANE 270
           ++ +F L VEI      GR ++  ELL  + A+  + GA   + L I G+ + G  +A E
Sbjct: 177 RRFRFFLNVEI------GRHLSHDELLAHHHAVLYAVGAPDDRRLNIDGMGIPGTGTATE 230

Query: 271 FLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAAR-------------------- 310
            +  IN    + +   D   +  +RV+VIG GN A+D AR                    
Sbjct: 231 LVAWINAHPDFAYLPVD---LSHERVVVIGNGNVALDVARLLTADPDNLARTDISEFALH 287

Query: 311 ----SALRLGAEVIIAYRRGKE----------DMTARIEEVQHAKEEGVKFMFFVNPVEF 356
               SA+R   EV++A RRG             + A  E V  A +  +    F    + 
Sbjct: 288 VLGGSAVR---EVVVAARRGPAHSAFTLPELIGLKATSEVVLDAGDRKLVEGDFATVSDS 344

Query: 357 IGDEEGRVKAVKFEKMKPLEERDKR-----------GKRK-------IVGTGEYITVEAD 398
           +  ++  V +   +  KP   R  R           G ++       + GT E    +A 
Sbjct: 345 LTRKKLEVLSSLVDSSKPTSRRRIRLAYQLTPKRVLGNQRATGVEFSVTGTEESRRFDAG 404

Query: 399 TVIIAIGQTPNKILWRTTP----GLKVREDGTIIVDENLMTSIPGVFAGGDAIRG 449
            V+ ++G    +I  R  P       +  DG  +VD +    +PG +  G   RG
Sbjct: 405 LVLTSVGYRGKRI--RDLPFDEEAAVIPNDGGRVVDPSRGRPMPGAYVAGWIKRG 457


>sp|Q10547|FPRB_MYCTU PROBABLE FERREDOXIN/FERREDOXIN--NADP REDUCTASE (FNR)
           >gi|7451579|pir||C70781 probable fprB protein -
           Mycobacterium tuberculosis (strain H37RV)
           >gi|1314025|emb|CAA97393.1| (Z73101) fprB [Mycobacterium
           tuberculosis]
           Length = 575
           
 Score = 74.1 bits (179), Expect = 3e-12
 Identities = 98/368 (26%), Positives = 157/368 (42%), Gaps = 76/368 (20%)

Query: 146 EIRGIKRNGKRVAVIGAGPAGLTCAAEL-AKMGYEVTIFEALHEPGGVLAYGI-PEFRLP 203
           E+R ++R    VAV+G+GPA +  A EL  + G +V +FE L  P G++  G+ P+ +  
Sbjct: 105 EVR-VRRQPLTVAVVGSGPAAMYAADELLVQQGVQVNVFEKLPTPYGLVRSGVAPDHQNT 163

Query: 204 KEILR-----KELKKLKF-LGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKI 257
           K + R        ++ +F L VEI      G+ +   ELL  + A+  + GA   + L I
Sbjct: 164 KRVTRLFDRIAGHRRFRFYLNVEI------GKHLGHAELLAHHHAVLYAVGAPDDRRLTI 217

Query: 258 PGINLNGIYSANEFLTRINLMKAYKFPEY-DTPIVVG-KRVIVIGAGNTAMDAAR----- 310
            G+ L G  +A E +  +N       P++ D P+ +  +RV++IG GN A+D AR     
Sbjct: 218 DGMGLPGTGTATELVAWLN-----GHPDFNDLPVDLSHERVVIIGNGNVALDVARVLAAD 272

Query: 311 --------------SALRLGA--EVIIAYRRGKEDMTARIEEV----------------Q 338
                         SALR  A  EV++A RRG       + E+                Q
Sbjct: 273 PHELAATDIADHALSALRNSAVREVVVAARRGPAHSAFTLPELIGLTAGADVVLDPGDHQ 332

Query: 339 HAKEE--GVKFMFFVNPVEF---IGDEEGRVKAVKFEKMK---PLEERDKRGKRK----- 385
              ++   V      N +E    +GD     + V   +++    L  R   G+R+     
Sbjct: 333 RVLDDLAIVADPLTRNKLEILSTLGDGSAPARRVGRPRIRLAYRLTPRRVLGQRRAGGVQ 392

Query: 386 --IVGTGEYITVEADTVIIAIGQTPNKI--LWRTTPGLKVREDGTIIVDENLMTSIPGVF 441
             + GT E   ++A  V+ +IG     I  L        V  DG  ++D      +PG +
Sbjct: 393 FSVTGTDELRQLDAGLVLTSIGYRGKPIPDLPFDEQAALVPNDGGRVIDPGTGEPVPGAY 452

Query: 442 AGGDAIRG 449
             G   RG
Sbjct: 453 VAGWIKRG 460


>pir||D72383 NADH oxidase - Thermotoga maritima (strain MSB8)
           >gi|4980883|gb|AAD35465.1|AE001718_2 (AE001718) NADH
           oxidase [Thermotoga maritima]
           Length = 443
           
 Score = 74.1 bits (179), Expect = 3e-12
 Identities = 81/310 (26%), Positives = 130/310 (41%), Gaps = 53/310 (17%)

Query: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYGIPEFRLPKEILRKELK---- 212
           V V+G GPAGL  A    +   +  I         ++  GIP        +  +      
Sbjct: 5   VVVVGGGPAGLVAAFTTKRFFGDKKILVVKKTEKEMVPCGIPYIFHTLGSVENDYMGIED 64

Query: 213 KLKFLGVEIKTDHIVGRTVTIPELLEE------YDAIFISTGAGTPKLLKIPGINLNGIY 266
           + K  G+++  D +V       +L  +      YD + I+TG+ +P + KIPG++L G++
Sbjct: 65  RFKGAGIDLLIDEVVDGNPDEKKLFTKSGKEISYDKLIIATGS-SPNIPKIPGVDLKGVF 123

Query: 267 SANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGAEVIIAYRRG 326
           +  +    + L+        D        V++IG G   ++ A    + G  V +     
Sbjct: 124 TVPKEADYLKLLHEKVKDAND--------VVIIGGGFIGVEVADEIKKSGKNVTL----- 170

Query: 327 KEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGD-EEGRVKAVKFEKMKPLEER---DKRG 382
                             V+ M  + PV F  D  E   K ++ + +K L  R   +  G
Sbjct: 171 ------------------VEIMDSLLPVSFDPDFGELARKELESDNVKVLTGRKVTEILG 212

Query: 383 KRKIVG----TGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENLMTSIP 438
             K+ G    +GE  T+ AD V++A G  PN  L R   GLKV E G I  DE + TS P
Sbjct: 213 TEKVEGVKLDSGE--TIPADVVVLATGYKPNSELARKL-GLKVTELGFIETDEYMRTSKP 269

Query: 439 GVFAGGDAIR 448
            +FA GD ++
Sbjct: 270 DIFAAGDCVQ 279


>emb|CAC01564.1| (AL391039) 2,4-dienoyl-CoA reductase [NADPH] [Streptomyces
           coelicolor A3(2)]
           Length = 671
           
 Score = 74.1 bits (179), Expect = 3e-12
 Identities = 56/160 (35%), Positives = 79/160 (49%), Gaps = 22/160 (13%)

Query: 152 RNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVL--AYGIPEFRLPKEILRK 209
           R  KRVAV+GAGPAGL CA   A+ G+EVT+F+A  E GG L  A  IP  +   E LR 
Sbjct: 373 RRRKRVAVVGAGPAGLACAVSAAERGHEVTLFDAASEIGGQLNVARKIPGKQEFDETLRY 432

Query: 210 ELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSAN 269
              +L   GV+++ +  VG        L  +D + ++TG  TP+   IPG++   +    
Sbjct: 433 FRTQLAAHGVDVRLNTRVGVAD-----LTGHDEVVVATGV-TPRTPDIPGVDHPSVVGYL 486

Query: 270 EFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAA 309
           + L                   VG+RV ++GAG    D A
Sbjct: 487 DVLR--------------DAAPVGERVAILGAGGIGFDVA 512


>pir||A70920 probable adrenodoxin and NADPH ferredoxin reductase - Mycobacterium
           tuberculosis (strain H37RV) >gi|2076681|emb|CAB08363.1|
           (Z95150) fprA [Mycobacterium tuberculosis]
           Length = 456
           
 Score = 73.7 bits (178), Expect = 4e-12
 Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 23/194 (11%)

Query: 157 VAVIGAGPAGLTCAAELAK-------MGYEVTIFEALHEPGGVLAYGI-PEFRLPKEILR 208
           +A++G+GP+    AA L K       +   V + E L  P G++  G+ P+    K I +
Sbjct: 6   IAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISK 65

Query: 209 KELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSA 268
           +  K  +        + +VG  V   EL E YDA+  + GA + ++L IPG +L G  +A
Sbjct: 66  QFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAA 125

Query: 269 NEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGAEVIIAYRRGKE 328
            +F+   N   A+   E  +P + G R +VIG GN A+D AR  L               
Sbjct: 126 VDFVGWYN---AHPHFEQVSPDLSGARAVVIGNGNVALDVARILLT------------DP 170

Query: 329 DMTARIEEVQHAKE 342
           D+ AR +   HA E
Sbjct: 171 DVLARTDIADHALE 184


>pir||H71171 probable NADH oxidase - Pyrococcus horikoshii
           >gi|3256978|dbj|BAA29661.1| (AP000002) 445aa long
           hypothetical NADH oxidase [Pyrococcus horikoshii]
           Length = 445
           
 Score = 72.2 bits (174), Expect = 1e-11
 Identities = 79/312 (25%), Positives = 142/312 (45%), Gaps = 56/312 (17%)

Query: 155 KRVAVIGAGPAGLTCAAELAKMG--YEVTIFEAL----HEPGGV------------LAYG 196
           K+V +IG G AG++ A+ + ++   ++V +FEA     H P G+            L Y 
Sbjct: 7   KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYY 66

Query: 197 IPEFRLPKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLK 256
            PE  + K  +   L       +E+ T ++  R     E   E+D +  + GA +P++  
Sbjct: 67  PPEVFIKKRGIDLHLNAEV---IEVDTGYVRVRE-NGGEKSYEWDYLVFANGA-SPQVPA 121

Query: 257 IPGINLNGIYSAN---EFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSAL 313
           I G+NL G+++A+   + L     M+ YK           + V++IG G   ++ A +  
Sbjct: 122 IEGVNLKGVFTADLPPDALAIREYMEKYKV----------ENVVIIGGGYIGIEMAEAFA 171

Query: 314 RLGAEVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMK 373
             G  V +  R  +    +  +EV    EE +K    VN              ++ +++ 
Sbjct: 172 AQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKK--HVN--------------LRLQEIT 215

Query: 374 PLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENL 433
              E ++R ++ +   GEY   +A+ VI+A G  PN  L +   G+++ E G I  +E +
Sbjct: 216 MKIEGEERVEKVVTDAGEY---KAELVILATGIKPNIELAKQL-GVRIGETGAIWTNEKM 271

Query: 434 MTSIPGVFAGGD 445
            TS+  V+A GD
Sbjct: 272 QTSVENVYAAGD 283


>emb|CAB60462.1| (AL132856) putative ferredoxin/ferredoxin-NADP reductase (EC
           1.18.1.2) [Streptomyces coelicolor A3(2)]
           Length = 454
           
 Score = 72.2 bits (174), Expect = 1e-11
 Identities = 55/179 (30%), Positives = 89/179 (48%), Gaps = 25/179 (13%)

Query: 156 RVAVIGAGPAGLTCAAELAKM------GYEVTIFEALHEPGGVLAYGI----PEFRLPKE 205
           RVA++G+GPAG+  A  L K       G  + IFE +  P G++ YG+    P  +    
Sbjct: 6   RVAIVGSGPAGIYAADALLKSEVAADPGVSIDIFERMPAPFGLIRYGVAPDHPRIKGIIT 65

Query: 206 ILRKELKKLK---FLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINL 262
            L + L K +   F  V   TD      V++ +L   YD +  +TGA   + L +PGI+L
Sbjct: 66  ALHQVLDKPQIRLFGNVNYPTD------VSLDDLRAFYDGVIFATGATADRDLSLPGIDL 119

Query: 263 NGIYSANEFLTRINLMKAYKFPEYD-TPIVVGKRVIVIGAGNTAMDAARSALRLGAEVI 320
           +G Y A +F+   +       P++  T  +  ++V V+G GN A+D AR   +   E++
Sbjct: 120 DGSYGAADFVAWYD-----GHPDFPRTWPLEAEKVAVLGVGNVALDIARVLAKTADELL 173


>sp|O66790|TRXB_AQUAE THIOREDOXIN REDUCTASE (TRXR) >gi|7427756|pir||B70345 thioredoxin
           reductase (NADPH) (EC 1.6.4.5) - Aquifex aeolicus
           >gi|2983154|gb|AAC06756.1| (AE000693) thioredoxin
           reductase [Aquifex aeolicus]
           Length = 323
           
 Score = 71.8 bits (173), Expect = 2e-11
 Identities = 85/339 (25%), Positives = 141/339 (41%), Gaps = 62/339 (18%)

Query: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAY--------GIPEFRLPKEILR 208
           V +IGAGPAG T A   A+ G++  +     E  G L          G+P      E+L+
Sbjct: 15  VIIIGAGPAGTTAAIYTARAGWKTLVLYRA-EADGALGVTQKIENYPGVPGPLSGYELLK 73

Query: 209 KELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNG--IY 266
              ++ K  G E     ++   +                 +   K+  I G    G  I 
Sbjct: 74  IMREQAKSFGAEFVRGKVIATDL----------------NSDPKKVYTIDGREFRGKTII 117

Query: 267 SANEFLTRINLMKAYKFPEY-----------DTPIVVGKRVIVIGAGNTAMDAARSALRL 315
            A+  + R N  K  +  E+           D      + V VIG  + A++ A    R 
Sbjct: 118 VASGAMERANKFKGEE--EFLGRGVSYCGVCDAAFFKDQPVAVIGDDDYAIEEAEFIARF 175

Query: 316 GAEVIIAYRRGKEDMTARIEEVQH-AKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKP 374
             +V       K  + A  E ++H  K   V+ +    P+E +GD+      VK  K+K 
Sbjct: 176 ANKVFFVVPGSK--IKAPPEVIEHFEKLPNVEILLRHRPIEIVGDQ-----VVKGIKLKD 228

Query: 375 LEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENLM 434
           LE+++++             +E + V I +G T   + +     +++ E   I+V+E +M
Sbjct: 229 LEKKEEK------------LLEVNGVFIFLGGTKPSVDF-LMGQVEMTEGDCIVVNEEMM 275

Query: 435 TSIPGVFAGGDAIRGEA-TVILAMGDGRKAAKAIHEYLS 472
           TS+PGVFA GD +  E    ++A   G KAA A+ ++LS
Sbjct: 276 TSVPGVFAAGDVLCNEVKQAVVAAAMGCKAALAVDKFLS 314


>sp|P56522|ADRO_RAT NADPH:ADRENODOXIN OXIDOREDUCTASE PRECURSOR (ADRENODOXIN REDUCTASE)
           (FERREDOXIN-NADP(+) REDUCTASE)
           >gi|2665454|dbj|BAA23759.1| (D63761) precursor for
           adrenodoxin reductase [Rattus norvegicus]
           Length = 494
           
 Score = 71.8 bits (173), Expect = 2e-11
 Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 156 RVAVIGAGPAGLTCAAELAK--MGYEVTIFEALHEPGGVLAYGI-PEFRLPKEILRKELK 212
           ++ V+G+GPAG   A  L K      V I+E    P G++ +G+ P+    K ++    +
Sbjct: 42  QICVVGSGPAGFYTAQHLLKHHTRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQ 101

Query: 213 KLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSANEFL 272
             +      + + +VGR V++PEL E Y A+ +S GA   + L+IPG  L G+ SA  F+
Sbjct: 102 TARSDRCAFRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFV 161

Query: 273 TRINLMKAYKFPEYD--TPIVVGKRVIVIGAGNTAMDAARSAL 313
              N       PE     P +     +++G GN A+D AR  L
Sbjct: 162 GWYN-----GLPENQKLAPDLSCDTAVILGQGNVALDVARILL 199


>pir||D75107 NADH oxidase (noxa-2) PAB1931 - Pyrococcus abyssi (strain Orsay)
           >gi|5458084|emb|CAB49573.1| (AJ248285) NADH oxidase
           (noxA-2) [Pyrococcus abyssi]
           Length = 440
           
 Score = 71.4 bits (172), Expect = 2e-11
 Identities = 93/347 (26%), Positives = 144/347 (40%), Gaps = 72/347 (20%)

Query: 156 RVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEP-------------GGVLAYGIPEFRL 202
           RV VIG+G AG   A  L K+  +  I     EP              G +         
Sbjct: 2   RVVVIGSGTAGSNFALFLRKLDRKAEIIVIGKEPTMQYSPCALPHVISGTIEKPEDVIVF 61

Query: 203 PKEILRKELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINL 262
           P E   K+  K+  LGVE K      + V   +    YD + ++TG+    +  I G+  
Sbjct: 62  PNEFYEKQKIKM-MLGVEAKKIDRERKVVITDKGEVPYDKLVLATGSKA-FIPPIKGVEN 119

Query: 263 NGIYSANEFLTRINLMKAYKFPEYDTPIVVGKR----VIVIGAGNTAMDAARSALRLGAE 318
            G+++    L  +  +K Y          +GKR     +VIGAG   ++ A +  +LG E
Sbjct: 120 EGVFTLKS-LDDVRRIKEY----------IGKRNPKKAVVIGAGLIGLEGAEAFAKLGME 168

Query: 319 VIIAY-------RRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEK 371
           V++             +DM + ++  ++ +E GVKF F V   E IG+    V+AVK   
Sbjct: 169 VLVVELLEHLLPTMLDKDMASIVQ--KNMEEHGVKFRFGVGVSEIIGNP---VEAVKIGD 223

Query: 372 MKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDE 431
                                 TVEAD V++A G   N  L +   GL+V     I+V+E
Sbjct: 224 E---------------------TVEADLVLVATGVRANVDLAKDA-GLEVNRG--IVVNE 259

Query: 432 NLMTSIPGVFAGG------DAIRGEATVILAMGDGRKAAKAIHEYLS 472
            L TS P ++A G      DA+ G+ T+        + AK   E+++
Sbjct: 260 YLQTSDPDIYAIGDCAEVIDAVTGKRTLSQLGTSAVRMAKVAAEHIA 306


>pir||T45314 probable ferredoxin [imported] - Mycobacterium leprae
           >gi|2326694|emb|CAB11006.1| (Z98271) possible ferredoxin
           [Mycobacterium leprae]
           Length = 456
           
 Score = 71.0 bits (171), Expect = 3e-11
 Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 38/266 (14%)

Query: 157 VAVIGAGPAGLTCAAELAK-------MGYEVTIFEALHEPGGVLAYGI-PEFRLPKEILR 208
           +A++G+GP+G   AA + K       +   V + E L  P G++  G+ P+    K I +
Sbjct: 9   IAIVGSGPSGFFAAASVLKAADASDEINVAVDMLEMLPTPWGLVRSGVAPDHPKIKSISK 68

Query: 209 KELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSA 268
           +  K  +        + IVG+ +   EL E YDA+  + GA + + L IPG +L G  +A
Sbjct: 69  QFEKTAEDPRFRFFGNVIVGKHIEPAELAERYDAVIYAVGAQSDRALNIPGEDLPGSIAA 128

Query: 269 NEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSAL--------------- 313
            +F+   N   A+      +P + G R +VIG GN A+D  R  +               
Sbjct: 129 VDFVGWYN---AHPNFHERSPDLSGSRAVVIGNGNVALDVTRILITDPDVLAFTDIADHA 185

Query: 314 ------RLGAEVIIAYRRGK-EDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEE----G 362
                 R   EV+I  RRG  +     +E  + A  EGV  +     +E I DE     G
Sbjct: 186 LESLRPRGIEEVVIVGRRGPLQTAFTTLELRELADIEGVDVLVDPAQLEGISDENAAAAG 245

Query: 363 RVKAVKFEKMKPLEER-DKRGKRKIV 387
           +      + ++    R  K G R+IV
Sbjct: 246 KTTRQNIKVLRDYTVRTPKPGHRRIV 271


>sp|O05204|AHPF_STAAU ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F >gi|1916317|gb|AAB51152.1|
           (U92441) alkyl hydroperoxide reductase subunit F
           [Staphylococcus aureus]
           Length = 507
           
 Score = 70.6 bits (170), Expect = 4e-11
 Identities = 87/337 (25%), Positives = 136/337 (39%), Gaps = 56/337 (16%)

Query: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVL--AYGIPEFRLPKEILRKELKK- 213
           V ++G GPA  + A   A+ G    I       GG +    GI  F   KE    E    
Sbjct: 208 VLIVGGGPASGSAAIYTARKGLRTGI--VADRIGGQVNDTAGIENFITVKETTGSEFSSN 265

Query: 214 ---------------LKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIP 258
                          ++   +E KTD  +  T+    +LE    + I+TGAG  KL  IP
Sbjct: 266 LAAHIDQYDIDAMTGIRATDIE-KTDEAIKVTLENGAVLES-KTVIIATGAGWRKL-NIP 322

Query: 259 GINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGAE 318
           G          E L  IN   A+  P  D P+   K V VIG GN+ ++AA     +   
Sbjct: 323 G---------EEQL--INKGVAF-CPHCDGPLFENKDVAVIGGGNSGVEAAIDLAGIVNH 370

Query: 319 VIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEER 378
           V + +    E     + + +      V         E +G++   V  +++E M      
Sbjct: 371 VTL-FEFASELKADNVLQDRLRSLSNVDIKTNAKTTEVVGEDH--VTGIRYEDMN----- 422

Query: 379 DKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENLMTSIP 438
                     TGE   +  D + + IG  PN   W     +++ E G I++D N  T++P
Sbjct: 423 ----------TGEEHLLNLDGIFVQIGLLPNTS-W-LNDAVELNERGEIVIDRNNNTNVP 470

Query: 439 GVFAGGDAI-RGEATVILAMGDGRKAAKAIHEYLSKS 474
           G+FA GD   +    +I++MG G  AA    +Y+ ++
Sbjct: 471 GIFAAGDVTDQKNKQIIISMGAGANAALNAFDYIIRN 507


>gi|6679767 ferredoxin reductase [Mus musculus]
           >gi|3023277|sp|Q61578|ADRO_MOUSE NADPH:ADRENODOXIN
           OXIDOREDUCTASE PRECURSOR (ADRENODOXIN REDUCTASE)
           (FERREDOXIN-NADP(+) REDUCTASE) >gi|2117685|pir||S60028
           ferredoxin--NADP+ reductase (EC 1.18.1.2) precursor -
           mouse >gi|1088469|dbj|BAA08659.1| (D49920)
           Ferredoxin-NADP Reductase precursor [Mus musculus]
           Length = 494
           
 Score = 70.2 bits (169), Expect = 5e-11
 Identities = 51/163 (31%), Positives = 80/163 (48%), Gaps = 10/163 (6%)

Query: 156 RVAVIGAGPAGLTCAAELAK--MGYEVTIFEALHEPGGVLAYGI-PEFRLPKEILRKELK 212
           ++ V+G+GPAG   A  L K      V I+E    P G++ +G+ P+    K ++    +
Sbjct: 42  QICVVGSGPAGFYTAQHLLKHHTHAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQ 101

Query: 213 KLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSANEFL 272
             +      + + +VGR V++PEL E Y A+ +S GA   + L IPG  L G+ SA  F+
Sbjct: 102 TARSDRCAFQGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLGIPGEELPGVVSARAFV 161

Query: 273 TRINLMKAYKFPEYD--TPIVVGKRVIVIGAGNTAMDAARSAL 313
              N       PE     P +     +++G GN A+D AR  L
Sbjct: 162 GWYN-----GLPENQELAPDLSCDTAVILGQGNVALDVARILL 199


>pir||G69759 thioredoxin reductase homolog ycgT - Bacillus subtilis
           >gi|2632613|emb|CAB12121.1| (Z99105) similar to
           thioredoxin reductase [Bacillus subtilis]
           Length = 336
           
 Score = 70.2 bits (169), Expect = 5e-11
 Identities = 87/336 (25%), Positives = 140/336 (40%), Gaps = 42/336 (12%)

Query: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLAYGIPEF------RLPKEILRKE 210
           V +IG GP GL  A        +  + E L + GG ++   PE        +P    ++ 
Sbjct: 10  VTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGKVSLFFPEKIIRDIGGIPGIAGKQL 69

Query: 211 LKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGI--YSA 268
           +++LK        D ++ + VT  E L+  D   + TG+   K      I   G+     
Sbjct: 70  IEQLKEQAATFDPDIVLNQRVTGFERLD--DGTIVLTGSEGKKHYTRTVILACGMGTLEV 127

Query: 269 NEFLTRINLMKAYKFPEYDTPIV---VGKRVIVIGAGNTAMDAARSALRLGAEVIIAYRR 325
           NEF +      A K   Y    +    GKRV++ G G+TA+D A     + A V + +RR
Sbjct: 128 NEFDSEDAARYAGKNLHYGVEKLDAFKGKRVVISGGGDTAVDWANELEPIAASVTVVHRR 187

Query: 326 GKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEERDKRGKRK 385
             E+       V   K+  V+ +      +  GDEEG +K+V     +  + +D      
Sbjct: 188 --EEFGGMESSVTKMKQSSVRVLTPYRLEQLNGDEEG-IKSVTVCHTESGQRKD------ 238

Query: 386 IVGTGEYITVEADTVIIAIG---QTPNKILWRTTPGLKVREDGTIIVDENLMTSIPGVFA 442
                    +E D +II  G        + W    GL++ E+G +  D ++ T++PGVF 
Sbjct: 239 ---------IEIDELIINHGFKIDLGPMMEW----GLEI-EEGRVKADRHMRTNLPGVFV 284

Query: 443 GGDAIRGEATVILAMG---DGRKAAKAIHEYLSKSA 475
            GDA   E+ + L  G   +G  A  +   YL   A
Sbjct: 285 AGDAAFYESKLRLIAGGFTEGPTAVNSAKAYLDPKA 320


>sp|Q9Z8M4|TRXB_CHLPN THIOREDOXIN REDUCTASE (TRXR) >gi|7431887|pir||C72093 thioredoxin
           reductase CP0444 [imported] - Chlamydophila pneumoniae
           (strains CWL029 and AR39) >gi|4376591|gb|AAD18463.1|
           (AE001616) Thioredoxin Reductase [Chlamydophila
           pneumoniae CWL029] >gi|7189366|gb|AAF38283.1| (AE002205)
           thioredoxin reductase [Chlamydophila pneumoniae AR39]
           >gi|8978688|dbj|BAA98524.1| (AP002546) thioredoxin
           reductase [Chlamydophila pneumoniae J138]
           Length = 311
           
 Score = 70.2 bits (169), Expect = 5e-11
 Identities = 81/308 (26%), Positives = 126/308 (40%), Gaps = 47/308 (15%)

Query: 156 RVAVIGAGPAGLTCAAELAKMGYEVTIFEALHE--PGGVLAY--------GIPEFRLPKE 205
           R+ +IG+GP+G T A   ++      +FE       GG L          G PE  L  +
Sbjct: 5   RLIIIGSGPSGYTAAIYASRALLHPLLFEGFFSGISGGQLMTTTEVENFPGFPEGILGPK 64

Query: 206 ILRKELKKLKFLGVEIKTDHIVGRTVTIPELL-----EEY--DAIFISTGAGTPKLLKIP 258
           ++    ++    G +     I+    ++   +     E Y  DA  I+TGA   K L+IP
Sbjct: 65  LMNNMKEQAVRFGTKTLAQDIISVDFSVRPFILKSKEETYSCDACIIATGASA-KRLEIP 123

Query: 259 GINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGAE 318
           G   +  +           + A    +  +PI   K + VIG G++A++ A    R G+ 
Sbjct: 124 GAGNDEFWQKG--------VTACAVCDGASPIFKNKDLYVIGGGDSALEEALYLTRYGSH 175

Query: 319 VIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEER 378
           V + +RR K    ++  E +    E + F++    V+  GD   R   +           
Sbjct: 176 VYVVHRRDKL-RASKAMEARAQNNEKITFLWNSEIVKISGDSIVRSVDI----------- 223

Query: 379 DKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENL-MTSI 437
                 K V T E  T EA  V  AIG  PN         L + E G I+ ++    TS+
Sbjct: 224 ------KNVQTQEITTREAAGVFFAIGHKPNTDF--LGGQLTLDESGYIVTEKGTSKTSV 275

Query: 438 PGVFAGGD 445
           PGVFA GD
Sbjct: 276 PGVFAAGD 283


>gi|4758354 ferredoxin reductase; adrenodoxin reductase; Ferredoxin reductase
           (adrenodoxin reductase) [Homo sapiens]
           >gi|105982|pir||A40487 ferredoxin--NADP+ reductase (EC
           1.18.1.2), long form, precursor - human
           >gi|178214|gb|AAB59498.1| (J03826) adrenodoxin reductase
           precursor species 2 [Homo sapiens]
           Length = 497
           
 Score = 69.9 bits (168), Expect = 6e-11
 Identities = 51/160 (31%), Positives = 79/160 (48%), Gaps = 5/160 (3%)

Query: 156 RVAVIGAGPAGLTCAAELAKMGY-EVTIFEALHEPGGVLAYGI-PEFRLPKEILRKELKK 213
           ++ V+G+GPAG   A  L K     V I+E    P G++ +G+ P+    K ++    + 
Sbjct: 40  QICVVGSGPAGFYTAQHLLKHPQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQT 99

Query: 214 LKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSANEFLT 273
                     +  VGR VT+PEL E Y A+ +S GA   + L+IPG  L G+ SA  F+ 
Sbjct: 100 AHSGRCAFWGNVEVGRDVTVPELQEAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVG 159

Query: 274 RINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSAL 313
             N +   +  E   P +     +++G GN A+D AR  L
Sbjct: 160 WYNGLPENQELE---PDLSCDTAVILGQGNVALDVARILL 196


>gb|AAA51668.1| (M58509) adrenodoxin reductase [Homo sapiens]
           Length = 497
           
 Score = 69.9 bits (168), Expect = 6e-11
 Identities = 51/160 (31%), Positives = 79/160 (48%), Gaps = 5/160 (3%)

Query: 156 RVAVIGAGPAGLTCAAELAKMGY-EVTIFEALHEPGGVLAYGI-PEFRLPKEILRKELKK 213
           ++ V+G+GPAG   A  L K     V I+E    P G++ +G+ P+    K ++    + 
Sbjct: 40  QICVVGSGPAGFYTAQHLLKHPQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQT 99

Query: 214 LKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSANEFLT 273
                     +  VGR VT+PEL E Y A+ +S GA   + L+IPG  L G+ SA  F+ 
Sbjct: 100 AHSGRCAFWGNVEVGRDVTVPELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVG 159

Query: 274 RINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSAL 313
             N +   +  E   P +     +++G GN A+D AR  L
Sbjct: 160 WYNGLPENQELE---PDLSCDTAVILGQGNVALDVARILL 196


>gb|AAA51669.1| (M58509) adrenodoxin reductase [Homo sapiens]
           Length = 491
           
 Score = 69.9 bits (168), Expect = 6e-11
 Identities = 51/160 (31%), Positives = 79/160 (48%), Gaps = 5/160 (3%)

Query: 156 RVAVIGAGPAGLTCAAELAKMGY-EVTIFEALHEPGGVLAYGI-PEFRLPKEILRKELKK 213
           ++ V+G+GPAG   A  L K     V I+E    P G++ +G+ P+    K ++    + 
Sbjct: 40  QICVVGSGPAGFYTAQHLLKHPQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQT 99

Query: 214 LKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSANEFLT 273
                     +  VGR VT+PEL E Y A+ +S GA   + L+IPG  L G+ SA  F+ 
Sbjct: 100 AHSGRCAFWGNVEVGRDVTVPELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVG 159

Query: 274 RINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSAL 313
             N +   +  E   P +     +++G GN A+D AR  L
Sbjct: 160 WYNGLPENQELE---PDLSCDTAVILGQGNVALDVARILL 196


>sp|P22570|ADRO_HUMAN NADPH:ADRENODOXIN OXIDOREDUCTASE PRECURSOR (ADRENODOXIN REDUCTASE)
           (FERREDOXIN-NADP(+) REDUCTASE) >gi|178213|gb|AAB59497.1|
           (J03826) adrenodoxin reductase precursor species 1 [Homo
           sapiens]
           Length = 491
           
 Score = 69.9 bits (168), Expect = 6e-11
 Identities = 51/160 (31%), Positives = 79/160 (48%), Gaps = 5/160 (3%)

Query: 156 RVAVIGAGPAGLTCAAELAKMGY-EVTIFEALHEPGGVLAYGI-PEFRLPKEILRKELKK 213
           ++ V+G+GPAG   A  L K     V I+E    P G++ +G+ P+    K ++    + 
Sbjct: 40  QICVVGSGPAGFYTAQHLLKHPQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQT 99

Query: 214 LKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSANEFLT 273
                     +  VGR VT+PEL E Y A+ +S GA   + L+IPG  L G+ SA  F+ 
Sbjct: 100 AHSGRCAFWGNVEVGRDVTVPELQEAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVG 159

Query: 274 RINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSAL 313
             N +   +  E   P +     +++G GN A+D AR  L
Sbjct: 160 WYNGLPENQELE---PDLSCDTAVILGQGNVALDVARILL 196


>pir||H83044 2,4-dienoyl-CoA reductase FadH2 PA4814 [imported] - Pseudomonas
           aeruginosa (strain PAO1)
           >gi|9951081|gb|AAG08199.1|AE004894_5 (AE004894)
           2,4-dienoyl-CoA reductase FadH2 [Pseudomonas aeruginosa]
           Length = 681
           
 Score = 69.9 bits (168), Expect = 6e-11
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 22/160 (13%)

Query: 152 RNGKRVAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGV--LAYGIPEFRLPKEILRK 209
           R  KR+AVIGAGPAGL+ A   A+ G+ V++FEA  E GG   LA  IP     +E LR 
Sbjct: 382 RTQKRIAVIGAGPAGLSAACVAAERGHRVSLFEASGEIGGQFNLAKRIPGKEEFRETLRY 441

Query: 210 ELKKLKFLGVEIKTDHIVGRTVTIPELLEEYDAIFISTGAGTPKLLKIPGINLNGIYSAN 269
              +L+ LGV+++    +G  V   EL  ++D + ++TG   P+  +I GI         
Sbjct: 442 FRVRLERLGVDLR----LGHRVRQGELDGQFDDVVVATGI-QPRRPRIDGI------GGP 490

Query: 270 EFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAA 309
             L+ +++++            VG RV ++GAG    D A
Sbjct: 491 TVLSYVDVLRG---------APVGARVAIVGAGGIGFDVA 521


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.320    0.140    0.410 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 183150156
Number of Sequences: 2977
Number of extensions: 8265406
Number of successful extensions: 26413
Number of sequences better than 1.0e-10: 100
Number of HSP's better than  0.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 25805
Number of HSP's gapped (non-prelim): 148
length of query: 475
length of database: 189,106,746
effective HSP length: 55
effective length of query: 420
effective length of database: 156,189,961
effective search space: 65599783620
effective search space used: 65599783620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 167 (69.5 bits)