BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1222 (hps) DE:D-arabino 3-hexulose 6-phosphate formaldehyde
lyase (hps)
(406 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75022 d-arabino 3-hexulose 6-phosphate formaldehyde lyase ... 788 0.0
pir||B71209 probable D-arabino 3-hexulose 6-phosphate formaldehy... 769 0.0
gi|11498467 D-arabino 3-hexulose 6-phosphate formaldehyde lyase ... 233 4e-60
gb|AAK40498.1| D-arabino 3-hexulose 6-phosphate formaldehyde lya... 198 8e-50
pir||C69073 conserved hypothetical protein MTH1546 - Methanobact... 196 3e-49
sp|Q9YAK0|YJ40_AERPE HYPOTHETICAL PROTEIN APE1940 >gi|7516834|pi... 192 8e-48
sp|P42405|HUMS_BACSU PROBABLE HEXULOSE-6-PHOSPHATE SYNTHASE (HUM... 174 1e-42
sp|O26351|Y249_METTH CONSERVED PROTEIN >gi|7429964|pir||B69131 c... 174 1e-42
sp|Q48907|HUMS_METAM HEXULOSE-6-PHOSPHATE SYNTHASE (HUMPS) (D-AR... 172 7e-42
gb|AAG29505.1|AF294615_1 (AF294615) 3-hexulose-6-phosphate synth... 171 9e-42
gi|11499385 conserved hypothetical protein [Archaeoglobus fulgid... 168 1e-40
dbj|BAA90546.1| (AB034913) 3-hexulose-6-phosphate synthase [Myco... 164 2e-39
gb|AAK40548.1| D-arabino 3-hexulose 6-phosphate formaldehyde lya... 156 5e-37
dbj|BAA06434.1| (D30762) unknown [Bacillus subtilis] >gi|1805418... 144 2e-33
sp|P42404|YCKF_BACSU HYPOTHETICAL 20.0 KDA PROTEIN IN TLPC-SRFAA... 137 3e-31
gi|11498903 D-arabino 3-hexulose 6-phosphate formaldehyde lyase ... 128 1e-28
sp|Q58644|YC47_METJA HYPOTHETICAL PROTEIN MJ1247 >gi|2128051|pir... 120 4e-26
dbj|BAA83098.1| (AB026428) 6-phospho-3-hexuloisomerase [Methylom... 119 5e-26
dbj|BAA90545.1| (AB034913) 6-phospho-3-hexuloisomerase [Mycobact... 116 6e-25
pir||H72691 probable hexulose-6-phosphate synthase APE0952 - Aer... 115 1e-24
sp|Q58842|YE47_METJA HYPOTHETICAL PROTEIN MJ1447 >gi|2128863|pir... 109 5e-23
pir||D69063 conserved hypothetical protein MTH1474 - Methanobact... 106 4e-22
pir||H82483 probable hexulose-6-phosphate synthase SgbH VCA0242 ... 88 2e-16
sp|P39304|SGAH_ECOLI PROBABLE HEXULOSE-6-PHOSPHATE SYNTHASE (HUM... 83 4e-15
sp|P75293|SGAH_MYCPN PROBABLE HEXULOSE-6-PHOSPHATE SYNTHASE (HUM... 81 2e-14
dbj|BAA97462.1| (AB025603) gene_id:F17P19.9~similar to unknown p... 81 2e-14
sp|P37678|SGBH_ECOLI PROBABLE HEXULOSE-6-PHOSPHATE SYNTHASE (HUM... 81 3e-14
sp|P44988|SGBH_HAEIN PROBABLE HEXULOSE-6-PHOSPHATE SYNTHASE (HUM... 73 6e-12
sp|P77245|YFET_ECOLI HYPOTHETICAL 31.2 KDA PROTEIN IN CYSP-AMIA ... 69 9e-11
>pir||C75022 d-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps) PAB1222 -
Pyrococcus abyssi (strain Orsay)
>gi|5459131|emb|CAB50617.1| (AJ248288) D-arabino
3-hexulose 6-phosphate formaldehyde lyase (hps)
[Pyrococcus abyssi]
Length = 406
Score = 788 bits (2012), Expect = 0.0
Identities = 406/406 (100%), Positives = 406/406 (100%)
Query: 1 MILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVAD 60
MILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVAD
Sbjct: 1 MILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVAD 60
Query: 61 LKTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQR 120
LKTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQR
Sbjct: 61 LKTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQR 120
Query: 121 AKELEQMGVHYILVHTGIDEQAQGKSPLEDLEKVVKAVKVPVAVAGGLNLETIPKVIELG 180
AKELEQMGVHYILVHTGIDEQAQGKSPLEDLEKVVKAVKVPVAVAGGLNLETIPKVIELG
Sbjct: 121 AKELEQMGVHYILVHTGIDEQAQGKSPLEDLEKVVKAVKVPVAVAGGLNLETIPKVIELG 180
Query: 181 ATIIIVGSAITKAKDPEAVTRKIIDLFWDEYMRTIRKAMKDITEHIEEVADKLKLEEVRG 240
ATIIIVGSAITKAKDPEAVTRKIIDLFWDEYMRTIRKAMKDITEHIEEVADKLKLEEVRG
Sbjct: 181 ATIIIVGSAITKAKDPEAVTRKIIDLFWDEYMRTIRKAMKDITEHIEEVADKLKLEEVRG 240
Query: 241 LVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLDFNVYVVGETITPAFEEGDLLIAISGS 300
LVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLDFNVYVVGETITPAFEEGDLLIAISGS
Sbjct: 241 LVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLDFNVYVVGETITPAFEEGDLLIAISGS 300
Query: 301 GETRTIVDAAEIAKQQGGKVVAITSYRDSTLGKLADVVVEIPGRTKADLPTDYIARQMLT 360
GETRTIVDAAEIAKQQGGKVVAITSYRDSTLGKLADVVVEIPGRTKADLPTDYIARQMLT
Sbjct: 301 GETRTIVDAAEIAKQQGGKVVAITSYRDSTLGKLADVVVEIPGRTKADLPTDYIARQMLT 360
Query: 361 KYKWTAPMGTLFEDSTMIFLDGIIALLMATFQKTEKDMRKKHATLE 406
KYKWTAPMGTLFEDSTMIFLDGIIALLMATFQKTEKDMRKKHATLE
Sbjct: 361 KYKWTAPMGTLFEDSTMIFLDGIIALLMATFQKTEKDMRKKHATLE 406
>pir||B71209 probable D-arabino 3-hexulose 6-phosphate formaldehyde lyase -
Pyrococcus horikoshii >gi|3258382|dbj|BAA31065.1|
(AP000007) 406aa long hypothetical D-arabino 3-hexulose
6-phosphate formaldehyde lyase [Pyrococcus horikoshii]
Length = 406
Score = 769 bits (1965), Expect = 0.0
Identities = 389/406 (95%), Positives = 403/406 (98%)
Query: 1 MILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVAD 60
MILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVAD
Sbjct: 1 MILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVAD 60
Query: 61 LKTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQR 120
LKTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYG+K+MVDLIGVKDKVQR
Sbjct: 61 LKTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGVKIMVDLIGVKDKVQR 120
Query: 121 AKELEQMGVHYILVHTGIDEQAQGKSPLEDLEKVVKAVKVPVAVAGGLNLETIPKVIELG 180
AKELEQMGVHYILVHTGIDEQAQGK+PLEDLEKVVKAVK+PVAVAGGLNLETIPKVIELG
Sbjct: 121 AKELEQMGVHYILVHTGIDEQAQGKTPLEDLEKVVKAVKIPVAVAGGLNLETIPKVIELG 180
Query: 181 ATIIIVGSAITKAKDPEAVTRKIIDLFWDEYMRTIRKAMKDITEHIEEVADKLKLEEVRG 240
ATI+IVGSAITK+KDPE VTRKIIDLFWDEYM+TIRKAMKDIT+HI EVADKL+L+EVRG
Sbjct: 181 ATIVIVGSAITKSKDPEGVTRKIIDLFWDEYMKTIRKAMKDITDHINEVADKLRLDEVRG 240
Query: 241 LVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLDFNVYVVGETITPAFEEGDLLIAISGS 300
LVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLDFNVYVVGETITPAFEEGDLLIAISGS
Sbjct: 241 LVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLDFNVYVVGETITPAFEEGDLLIAISGS 300
Query: 301 GETRTIVDAAEIAKQQGGKVVAITSYRDSTLGKLADVVVEIPGRTKADLPTDYIARQMLT 360
GET+TIVDAAEIAKQQGGKVVAITSY+DSTLG+LADVVVEIPGRTK D+PTDYIARQMLT
Sbjct: 301 GETKTIVDAAEIAKQQGGKVVAITSYKDSTLGRLADVVVEIPGRTKTDVPTDYIARQMLT 360
Query: 361 KYKWTAPMGTLFEDSTMIFLDGIIALLMATFQKTEKDMRKKHATLE 406
KYKWTAPMGTLFEDSTMIFLDGIIALLMATFQKTEKDMRKKHATLE
Sbjct: 361 KYKWTAPMGTLFEDSTMIFLDGIIALLMATFQKTEKDMRKKHATLE 406
>gi|11498467 D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps-1)
[Archaeoglobus fulgidus] >gi|7429976|pir||E69357
D-arabino 3-hexulose 6-phosphate formaldehyde lyase
(hps-1) homolog - Archaeoglobus fulgidus
>gi|2649745|gb|AAB90381.1| (AE001045) D-arabino
3-hexulose 6-phosphate formaldehyde lyase (hps-1)
[Archaeoglobus fulgidus]
Length = 432
Score = 233 bits (587), Expect = 4e-60
Identities = 137/308 (44%), Positives = 195/308 (62%), Gaps = 10/308 (3%)
Query: 2 ILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVADL 61
ILQVALDL ++++AI IA +A GGA WLE GTPLIK EGM A+ LK+ + K++AD+
Sbjct: 5 ILQVALDLLELKRAIEIAGEAIEGGADWLEAGTPLIKSEGMNAIRELKKHYRGHKVLADM 64
Query: 62 KTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQRA 121
KT+DTGA+EVEMAA+ GAD+V IL ++DD TI +A+ ARKYG +VM DLI V D RA
Sbjct: 65 KTIDTGAIEVEMAAKSGADIVIILALSDDDTIAEAIRAARKYGCEVMADLINVPDPASRA 124
Query: 122 KELEQMGVHYILVHTGIDEQAQGKSPLEDLEKVVKAVKVPVAVAGGLNLETIPKVIELGA 181
KE+E++GV Y+ VH GID+Q +G PLE L+ VV +V +PVA AGGL+ E + +GA
Sbjct: 125 KEVEELGVDYLNVHVGIDQQMKGLDPLEVLKDVVDSVSIPVAAAGGLDAERAAACVSMGA 184
Query: 182 TIIIVGSAITKAKDPEAVTRKI---IDLFWDEYMRTIRKAMKDITEHIEEVADKLKLEEV 238
+I+IVGS I K+++ RK+ ID ++ +R+ K + E I E+ ++ V
Sbjct: 185 SIVIVGSNIVKSRNVTESARKVREAIDRAAEKGGVEVRR--KSLDEEIRELLMRVSTPNV 242
Query: 239 RGLVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLDFNVYVVGETITPAFEEGDLLIAIS 298
+ + ++ G+ +VGKA + M D+ V E I A EGD+L+ I
Sbjct: 243 SDAMHRAKAMDGVYPLVRGKK-IVGKAVTVSTMDGDWAKPV--EAINVA-GEGDVLV-IK 297
Query: 299 GSGETRTI 306
SG+T +
Sbjct: 298 VSGDTAAV 305
>gb|AAK40498.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hpS-1)
[Sulfolobus solfataricus]
Length = 209
Score = 198 bits (499), Expect = 8e-50
Identities = 106/204 (51%), Positives = 141/204 (68%), Gaps = 7/204 (3%)
Query: 209 DEYMRTIRKAMKDITEHIEEVADKLKLEEVRGLVDAMIGA------NKIFIYGAGRSGLV 262
D+Y ++ K M DI E I A +K E+ +V+ + K+ + GAGRSGLV
Sbjct: 6 DDYPLSL-KTMYDIAEFILRAAKAIKPEQTIKMVNELENFYKNNRNGKVLVMGAGRSGLV 64
Query: 263 GKAFAMRLMHLDFNVYVVGETITPAFEEGDLLIAISGSGETRTIVDAAEIAKQQGGKVVA 322
G+AFAMRL+HL FN YV+GETI PA + D+++AISGSG T+ I+ AAE AK+ G K+++
Sbjct: 65 GRAFAMRLLHLGFNSYVLGETIVPAIGKNDIVVAISGSGRTKLILTAAEAAKEAGAKLIS 124
Query: 323 ITSYRDSTLGKLADVVVEIPGRTKADLPTDYIARQMLTKYKWTAPMGTLFEDSTMIFLDG 382
ITSY DS L K++DVV+EIPGRTK DY ARQ+L + AP+GTLFED+T IFLDG
Sbjct: 125 ITSYFDSPLAKISDVVIEIPGRTKYSKNEDYFARQILGITEPLAPLGTLFEDTTQIFLDG 184
Query: 383 IIALLMATFQKTEKDMRKKHATLE 406
I+A LM +KTE+D+R HA +E
Sbjct: 185 IVAELMIRLKKTEEDLRLIHANIE 208
>pir||C69073 conserved hypothetical protein MTH1546 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622667|gb|AAB86020.1| (AE000915) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 254
Score = 196 bits (494), Expect = 3e-49
Identities = 98/192 (51%), Positives = 134/192 (69%)
Query: 215 IRKAMKDITEHIEEVADKLKLEEVRGLVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLD 274
I++A++DI ++E++ + + ++ + A +F+ G GRSGLV +AFAMRLMHL+
Sbjct: 63 IKEAIRDIIHNLEKMERDIDERTLDNFIEILTSAANVFVLGLGRSGLVARAFAMRLMHLE 122
Query: 275 FNVYVVGETITPAFEEGDLLIAISGSGETRTIVDAAEIAKQQGGKVVAITSYRDSTLGKL 334
N +VVGETITPA EGD+LIAISGSG T IV+AA IA+++G KVVA+TSY DS L L
Sbjct: 123 INAFVVGETITPAINEGDVLIAISGSGRTSYIVNAASIARERGAKVVAVTSYPDSDLAGL 182
Query: 335 ADVVVEIPGRTKADLPTDYIARQMLTKYKWTAPMGTLFEDSTMIFLDGIIALLMATFQKT 394
AD+ V I GRTK D DY+ RQM + P+GTLFE S ++FLDGIIA LM F K
Sbjct: 183 ADLTVTIKGRTKIDGEKDYMKRQMRGNHHSRTPLGTLFEISALVFLDGIIAELMERFDKR 242
Query: 395 EKDMRKKHATLE 406
E+D+ +H++ +
Sbjct: 243 EEDLHHRHSSFD 254
>sp|Q9YAK0|YJ40_AERPE HYPOTHETICAL PROTEIN APE1940 >gi|7516834|pir||H72582 hypothetical
protein APE1940 - Aeropyrum pernix (strain K1)
>gi|5105636|dbj|BAA80949.1| (AP000062) 222aa long
hypothetical protein [Aeropyrum pernix]
Length = 222
Score = 192 bits (482), Expect = 8e-48
Identities = 99/175 (56%), Positives = 123/175 (69%), Gaps = 8/175 (4%)
Query: 240 GLVDAMIGA--------NKIFIYGAGRSGLVGKAFAMRLMHLDFNVYVVGETITPAFEEG 291
G VD +G K+ + GAGRSGLVGKAFAMRL+HL FN YV+GETI P+ EG
Sbjct: 47 GQVDRFVGELERVYREKRKVLVMGAGRSGLVGKAFAMRLLHLGFNSYVLGETIVPSVREG 106
Query: 292 DLLIAISGSGETRTIVDAAEIAKQQGGKVVAITSYRDSTLGKLADVVVEIPGRTKADLPT 351
DL++AISGSG T+ IV AAE AKQ G V AIT+Y DS LG+L+D+VV +PGRTK+
Sbjct: 107 DLVVAISGSGRTKVIVTAAETAKQVGATVAAITTYPDSPLGRLSDIVVRVPGRTKSSKMD 166
Query: 352 DYIARQMLTKYKWTAPMGTLFEDSTMIFLDGIIALLMATFQKTEKDMRKKHATLE 406
DY ARQ+L ++ AP+GTLFED+TM+FLDG+I LM E+ MR HA +E
Sbjct: 167 DYFARQILGIHEPLAPLGTLFEDTTMVFLDGVIYSLMTRLGIDEEYMRNMHANVE 221
>sp|P42405|HUMS_BACSU PROBABLE HEXULOSE-6-PHOSPHATE SYNTHASE (HUMPS) (D-ARABINO
3-HEXULOSE 6-PHOSPHATE FORMALDEHYDE LYASE)
>gi|7448355|pir||A69761 D-arabino 3-hexulose 6-phosphate
formaldeh homolog yckG - Bacillus subtilis
>gi|2632632|emb|CAB12140.1| (Z99105) similar to
D-arabino 3-hexulose 6-phosphate formaldehyde lyase
[Bacillus subtilis]
Length = 210
Score = 174 bits (437), Expect = 1e-42
Identities = 91/207 (43%), Positives = 134/207 (63%), Gaps = 2/207 (0%)
Query: 1 MILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVAD 60
M LQ+ALDL +I +AI + ++ + +E+GTP++ EG+RAV+ +K FP K++AD
Sbjct: 1 MELQLALDLVNIPEAIELVKEVEQY-IDVVEIGTPVVINEGLRAVKEIKEAFPQLKVLAD 59
Query: 61 LKTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQR 120
LK MD G E+ A+ GAD++++LG DD TIK A+ A+K K++VD+I VKD R
Sbjct: 60 LKIMDAGGYEIMKASEAGADIITVLGATDDATIKGAVEEAKKQKKKILVDMINVKDIESR 119
Query: 121 AKELEQMGVHYILVHTGIDEQAQGKSPLEDLEKVVKAVK-VPVAVAGGLNLETIPKVIEL 179
AKE++ +GV YI VHTG D QA+GK+ E+L + VK A+AGG+ L+T+P+VI+
Sbjct: 120 AKEIDALGVDYICVHTGYDLQAEGKNSFEELTTIKNTVKNAKTAIAGGIKLDTLPEVIQQ 179
Query: 180 GATIIIVGSAITKAKDPEAVTRKIIDL 206
++IVG IT A D K+ L
Sbjct: 180 KPDLVIVGGGITSAADKAETASKMKQL 206
>sp|O26351|Y249_METTH CONSERVED PROTEIN >gi|7429964|pir||B69131 conserved hypothetical
protein MTH249 - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2621299|gb|AAB84755.1| (AE000812)
conserved protein [Methanobacterium thermoautotrophicum]
Length = 197
Score = 174 bits (437), Expect = 1e-42
Identities = 93/196 (47%), Positives = 129/196 (65%), Gaps = 3/196 (1%)
Query: 212 MRTIRKAMKDITEHIEEVADKLKLEEVRGLVDAMIGANKIFIYGAGRSGLVGKAFAMRLM 271
M +R ++ I +H E DK+ E+ ++ ++ A+ +FI G GRS L+GKAFAMRLM
Sbjct: 4 MEILRNTVQKIAKHAIEAIDKVDEAELEMMISKIMDASSVFIVGTGRSELIGKAFAMRLM 63
Query: 272 HLDFNVYVVGETITPAFEEGDLLIAISGSGETRTIVDAAEIAKQQGGKVVAITSYRDSTL 331
HL F V+VVG+ TPA + D LIAISGSGET+T+ AAE ++ G VVA+T+ +STL
Sbjct: 64 HLGFKVHVVGDVTTPAIRDEDCLIAISGSGETKTVTLAAETSRSVGATVVAVTATPESTL 123
Query: 332 GKLADVVVEIPGRTKADLPTDYIARQMLT-KYKWTAPMGTLFEDSTMIFLDGIIALLMAT 390
+DVV+ IP +TK P Y +L +Y PMGTLFEDST +FLDG+IA M+
Sbjct: 124 TGYSDVVICIPSKTKE--PWKYYTSGVLRGEYDDLTPMGTLFEDSTHLFLDGLIAEFMSI 181
Query: 391 FQKTEKDMRKKHATLE 406
K EKD++++HA +E
Sbjct: 182 LGKREKDLKERHAIIE 197
>sp|Q48907|HUMS_METAM HEXULOSE-6-PHOSPHATE SYNTHASE (HUMPS) (D-ARABINO 3-HEXULOSE
6-PHOSPHATE FORMALDEHYDE LYASE)
>gi|2104220|dbj|BAA19967.1| (D64136) D-arabino
3-hexulose 6-phosphate formaldehyde lyase [Methylomonas
aminofaciens] >gi|5706381|dbj|BAA83096.1| (AB026428)
3-hexulose-6-phosphate synthase [Methylomonas
aminofaciens] >gi|1588275|prf||2208290A
3-hexulose-6-phosphate synthase [Methylomonas
aminofaciens]
Length = 209
Score = 172 bits (431), Expect = 7e-42
Identities = 93/206 (45%), Positives = 130/206 (62%), Gaps = 2/206 (0%)
Query: 2 ILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVADL 61
+ Q+ALD D + +++AEK A LE+GTP IK G++ +E L+ +FP+ KI+ DL
Sbjct: 3 LTQMALDSLDFDATVALAEKVAPH-VDILEIGTPCIKHNGIKLLETLRAKFPNNKILVDL 61
Query: 62 KTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQRA 121
KTMD G E E + GAD+ ++LGVAD TIK + A KYG K +DLI V DK R
Sbjct: 62 KTMDAGFYEAEPFYKAGADITTVLGVADLGTIKGVIDAANKYGKKAQIDLINVGDKAART 121
Query: 122 KELEQMGVHYILVHTGIDEQAQGKSPLEDLEKVVKA-VKVPVAVAGGLNLETIPKVIELG 180
KE+ ++G H I VHTG+D+QA G++P DL V + + V+VAGG+ T+ +V + G
Sbjct: 122 KEVAKLGAHIIGVHTGLDQQAAGQTPFADLATVTGLNLGLEVSVAGGVKPATVAQVKDAG 181
Query: 181 ATIIIVGSAITKAKDPEAVTRKIIDL 206
ATII+ G+AI A DP A +I L
Sbjct: 182 ATIIVAGAAIYGAADPAAAAAEITGL 207
>gb|AAG29505.1|AF294615_1 (AF294615) 3-hexulose-6-phosphate synthase [Aminomonas aminovorus]
Length = 228
Score = 171 bits (430), Expect = 9e-42
Identities = 92/203 (45%), Positives = 130/203 (63%), Gaps = 2/203 (0%)
Query: 2 ILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVADL 61
++Q+ALD D +Q +++A A LE+GTP IK G++ +E L+ +FP+ KI+ DL
Sbjct: 5 LVQMALDSLDFDQTVALATTVAPH-VDILEIGTPCIKYNGIKLLETLRAKFPNNKILVDL 63
Query: 62 KTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQRA 121
KTMD G E E + GAD+V++LG AD TIK + VA KYG K VDLI V DK R
Sbjct: 64 KTMDAGFYEAEPFFKAGADIVTVLGTADIGTIKGVIDVANKYGKKAQVDLINVVDKAART 123
Query: 122 KELEQMGVHYILVHTGIDEQAQGKSPLEDLEKVVKA-VKVPVAVAGGLNLETIPKVIELG 180
KE+ ++G H I VHTG+D+QA G++P DL V + V ++VAGG+ T +V++ G
Sbjct: 124 KEVAKLGAHIIGVHTGLDQQAAGQTPFADLGLVSGLNLGVDISVAGGVKSTTAKQVVDAG 183
Query: 181 ATIIIVGSAITKAKDPEAVTRKI 203
ATI++ G+AI A DP A +I
Sbjct: 184 ATIVVAGAAIYGAADPAAAAAEI 206
>gi|11499385 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7388512|sp|O28478|YH96_ARCFU HYPOTHETICAL PROTEIN
AF1796 >gi|7429966|pir||C69474 conserved hypothetical
protein AF1796 - Archaeoglobus fulgidus
>gi|2648766|gb|AAB89472.1| (AE000979) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 183
Score = 168 bits (421), Expect = 1e-40
Identities = 87/185 (47%), Positives = 125/185 (67%), Gaps = 9/185 (4%)
Query: 222 ITEHIEEVADKLKLEEVRGLVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLDFNVYVVG 281
++EHI+ + + + LE V ++ + A IF+ GAGRSG + KAFAMRLMHL + VYVVG
Sbjct: 8 VSEHIKNLRNHIDLETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVG 67
Query: 282 ETITPAFEEGDLLIAISGSGETRTIVDAAEIAKQQGGKVVAITSYRDSTLGKLADVVVEI 341
ET+TP + D+L+AISGSGET ++V+ ++ AK G K+VA+T RDS+L K+ADVV+ +
Sbjct: 68 ETVTPRITDQDVLVAISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVV 127
Query: 342 PGRTKADLPTDYIARQMLTKYKWTAPMGTLFEDSTMIFLDGIIALLMATFQKTEKDMRKK 401
G+ K + D I Q+ AP+GT+FE + MIFLD ++A +M TEKD+ +
Sbjct: 128 KGKMKQE--RDEILSQL-------APLGTMFELTAMIFLDALVAEIMMQKHLTEKDLEAR 178
Query: 402 HATLE 406
HA LE
Sbjct: 179 HAVLE 183
>dbj|BAA90546.1| (AB034913) 3-hexulose-6-phosphate synthase [Mycobacterium gastri]
Length = 207
Score = 164 bits (410), Expect = 2e-39
Identities = 85/203 (41%), Positives = 129/203 (62%), Gaps = 1/203 (0%)
Query: 1 MILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVAD 60
M LQVA+DL E A+ +A K A +E+GTPLI+ EG+ + +K+ PD+ + AD
Sbjct: 1 MKLQVAIDLLSTEAALELAGKVAEY-VDIIELGTPLIEAEGLSVITAVKKAHPDKIVFAD 59
Query: 61 LKTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQR 120
+KTMD G LE ++A + GAD+V++LG ADD TI A+ A+ + V+VDLIG++DK R
Sbjct: 60 MKTMDAGELEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGIEDKATR 119
Query: 121 AKELEQMGVHYILVHTGIDEQAQGKSPLEDLEKVVKAVKVPVAVAGGLNLETIPKVIELG 180
A+E+ +G ++ +H G+DEQA+ L L + +VP +VAGG+ + TIP V + G
Sbjct: 120 AQEVRALGAKFVEMHAGLDEQAKPGFDLNGLLAAGEKARVPFSVAGGVKVATIPAVQKAG 179
Query: 181 ATIIIVGSAITKAKDPEAVTRKI 203
A + + G AI A DP A +++
Sbjct: 180 AEVAVAGGAIYGAADPAAAAKEL 202
>gb|AAK40548.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hpS-2)
[Sulfolobus solfataricus]
Length = 225
Score = 156 bits (390), Expect = 5e-37
Identities = 82/207 (39%), Positives = 131/207 (62%), Gaps = 3/207 (1%)
Query: 3 LQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVADLK 62
LQ+ALD DI AI + + +E+GTPL+K G+ + +K PD+ IVAD K
Sbjct: 15 LQIALDFIDINDAIKVVNEVKDLENEIIEIGTPLLKSFGIEGIRKIKSLVPDKIIVADTK 74
Query: 63 TMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQRAK 122
T D G +EVE+A GA ++++LG+ DD TI A+ AR+ I V DLI VK+ +R+K
Sbjct: 75 TADAGDVEVEIAKLGGAHIMTVLGIMDDSTIYSAVKKARELDILVQADLINVKNVYERSK 134
Query: 123 ELEQMGVHYILVHTGIDEQAQGKSPLEDLEKVVKAV---KVPVAVAGGLNLETIPKVIEL 179
EL+Q+GV I H G+D Q + DL+ ++ V + +++AGGLN + I ++I+L
Sbjct: 135 ELKQLGVDIIGFHVGLDVQKSRGISVADLKNEIRKVSELNLIISIAGGLNKDRILELIDL 194
Query: 180 GATIIIVGSAITKAKDPEAVTRKIIDL 206
+I +VG AIT++K+P+ V+++I+++
Sbjct: 195 PVSIYVVGGAITRSKEPKNVSKEIVNI 221
>dbj|BAA06434.1| (D30762) unknown [Bacillus subtilis] >gi|1805418|dbj|BAA08980.1|
(D50453) yckG [Bacillus subtilis]
Length = 175
Score = 144 bits (360), Expect = 2e-33
Identities = 76/171 (44%), Positives = 111/171 (64%), Gaps = 2/171 (1%)
Query: 1 MILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVAD 60
M LQ+ALDL +I +AI + ++ + +E+GTP++ EG+RAV+ +K FP K++AD
Sbjct: 1 MELQLALDLVNIPEAIELVKEVEQY-IDVVEIGTPVVINEGLRAVKEIKEAFPQLKVLAD 59
Query: 61 LKTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQR 120
LK MD G E+ A+ GAD++++LG DD TIK A+ A+K K++VD+I V D R
Sbjct: 60 LKIMDAGGYEIMKASEAGADIITVLGATDDATIKGAVEEAKKQKKKILVDMINVTDIESR 119
Query: 121 AKELEQMGVHYILVHTGIDEQAQGKSPLEDLEKVVKAVK-VPVAVAGGLNL 170
AKE++ +GV YI VHTG D QA+GK+ E+L + VK A+A NL
Sbjct: 120 AKEIDALGVDYICVHTGYDLQAEGKNSFEELTTIKNTVKNAKTAIAAASNL 170
>sp|P42404|YCKF_BACSU HYPOTHETICAL 20.0 KDA PROTEIN IN TLPC-SRFAA INTERGENIC REGION
(ORF9) >gi|7429967|pir||H69760 conserved hypothetical
protein yckF - Bacillus subtilis
>gi|1438846|dbj|BAA06433.1| (D30762) unknown [Bacillus
subtilis] >gi|1805417|dbj|BAA08979.1| (D50453) yckF
[Bacillus subtilis] >gi|2632631|emb|CAB12139.1| (Z99105)
similar to hypothetical proteins [Bacillus subtilis]
Length = 185
Score = 137 bits (341), Expect = 3e-31
Identities = 77/191 (40%), Positives = 112/191 (58%), Gaps = 16/191 (8%)
Query: 223 TEHIEEVADKL-------KLEEVRGLVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLDF 275
TE++ E+ ++L EE L D ++ +++IF GAGRSGL+ K+FAMRLMH+ F
Sbjct: 4 TEYVAEILNELHNSAAYISNEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGF 63
Query: 276 NVYVVGETITPAFEEGDLLIAISGSGETRTIVDAAEIAKQQGGKVVAITSYRDSTLGKLA 335
N ++VGE +TP EGDL+I SGSGET++++ A AK G V A+T +S++GK A
Sbjct: 64 NAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIGKQA 123
Query: 336 DVVVEIPGRTKADLPTDYIARQMLTKYKWTAPMGTLFEDSTMIFLDGIIALLMATFQKTE 395
D+++ +PG K Q YK PMG+LFE + ++F D +I LM
Sbjct: 124 DLIIRMPGSPK---------DQSNGSYKTIQPMGSLFEQTLLLFYDAVILKLMEKKGLDS 174
Query: 396 KDMRKKHATLE 406
+ M HA LE
Sbjct: 175 ETMFTHHANLE 185
>gi|11498903 D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps-2)
[Archaeoglobus fulgidus] >gi|7450099|pir||H69412
D-arabino 3-hexulose 6-phosphate formaldehyde lyase
(hps-2) homolog - Archaeoglobus fulgidus
>gi|2649276|gb|AAB89943.1| (AE001014) D-arabino
3-hexulose 6-phosphate formaldehyde lyase (hps-2)
[Archaeoglobus fulgidus]
Length = 394
Score = 128 bits (319), Expect = 1e-28
Identities = 76/204 (37%), Positives = 115/204 (56%), Gaps = 3/204 (1%)
Query: 3 LQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVADLK 62
LQ+A+D+ D+ + + + E+ EVGTPL K+ G + L+ PD + DLK
Sbjct: 176 LQIAIDIPDLGEVLKVLEQIPDSDHIVFEVGTPLAKRYGCEVILKLREVKPDAFYILDLK 235
Query: 63 TMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQRAK 122
T+D G LE MAA A+ V I G+A TI + A K GI VD++ V D ++R +
Sbjct: 236 TLDVGNLEARMAADATANAVVISGLAPTSTIVKGIREAEKTGILSYVDMMNVDDPIKRLE 295
Query: 123 ELEQMGV--HYILVHTGIDEQAQGKSPLEDLEKVVKAVKVPVAVAGGLNLETIPKVIELG 180
E+++ GV + + +H ID + + + P K+ + V VAVAGG+ E + +VI G
Sbjct: 296 EIQKAGVLPNVVELHRAIDSEDK-EPPWMLAGKIKEKFSVLVAVAGGIRPENVEEVIAAG 354
Query: 181 ATIIIVGSAITKAKDPEAVTRKII 204
A II+VG A+TKA+D E RK +
Sbjct: 355 ADIIVVGRAVTKARDVEGAVRKFM 378
>sp|Q58644|YC47_METJA HYPOTHETICAL PROTEIN MJ1247 >gi|2128051|pir||F64455 hypothetical
protein homolog MJ1247 - Methanococcus jannaschii
>gi|1591880|gb|AAB99251.1| (U67565) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 180
Score = 120 bits (297), Expect = 4e-26
Identities = 67/165 (40%), Positives = 97/165 (58%), Gaps = 18/165 (10%)
Query: 241 LVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLDFNVYVVGETITPAFEEGDLLIAISGS 300
L+D +I A KIFI+G GRSG +G+ FAMRLMHL F Y VGET TP++E+ DLLI ISGS
Sbjct: 33 LIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGS 92
Query: 301 GETRTIVDAAEIAKQQGGKVVAITSYRDSTLGKLADVVVEIPGRTKADLPTDYIARQMLT 360
G T +++ A+ AK ++AI + + + AD+ + + + +
Sbjct: 93 GRTESVLTVAKKAKNINNNIIAIVCECGNVV-EFADLTIPLEVKK--------------S 137
Query: 361 KYKWTAPMGTLFEDSTMIFLDGIIALLMATFQKTEKDMRKKHATL 405
KY PMGT FE++ +IFLD +IA +M E ++ K+H L
Sbjct: 138 KY---LPMGTTFEETALIFLDLVIAEIMKRLNLDESEIIKRHCNL 179
>dbj|BAA83098.1| (AB026428) 6-phospho-3-hexuloisomerase [Methylomonas aminofaciens]
Length = 181
Score = 119 bits (296), Expect = 5e-26
Identities = 74/198 (37%), Positives = 108/198 (54%), Gaps = 18/198 (9%)
Query: 209 DEYMRTIRKAMKDITEHIEEVADKLKLEEVRGLVDAMIGANKIFIYGAGRSGLVGKAFAM 268
++Y + + ++ + E D +++ LVDA A + FI GAGRS LV + FAM
Sbjct: 2 NKYQELVVSKLTNVINNTAEGYD----DKILSLVDA---AGRTFIGGAGRSLLVSRFFAM 54
Query: 269 RLMHLDFNVYVVGETITPAFEEGDLLIAISGSGETRTIVDAAEIAKQQGGKVVAITSYRD 328
RL+H + V +VGE +TP+ + GDL I ISGSG T T++ + AK QG K++ I+
Sbjct: 55 RLVHAGYQVSMVGEVVTPSIQAGDLFIVISGSGSTETLMPLVKKAKSQGAKIIVISMKAQ 114
Query: 329 STLGKLADVVVEIPGRTKADLPTDYIARQMLTKYKWTAPMGTLFEDSTMIFLDGIIALLM 388
S + +LAD+VV + G + PMGT+FE ST+ FL+ IA L+
Sbjct: 115 SPMAELADLVVPVGGNDANAFDKTH-----------GMPMGTIFELSTLWFLEATIAKLV 163
Query: 389 ATFQKTEKDMRKKHATLE 406
TE+ MR HA LE
Sbjct: 164 DQKGLTEEGMRAIHANLE 181
>dbj|BAA90545.1| (AB034913) 6-phospho-3-hexuloisomerase [Mycobacterium gastri]
Length = 199
Score = 116 bits (287), Expect = 6e-25
Identities = 68/185 (36%), Positives = 100/185 (53%), Gaps = 10/185 (5%)
Query: 222 ITEHIEEVADKLKLEEVRGLVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLDFNVYVVG 281
+ + + + A K+ E+V L ++ ++F+ GAGRSGLV + AMRLMH V+V G
Sbjct: 25 VRDEVADTAAKVDPEQVAVLARQIVQPGRVFVAGAGRSGLVLRMAAMRLMHFGLTVHVAG 84
Query: 282 ETITPAFEEGDLLIAISGSGETRTIVDAAEIAKQQGGKVVAITSYRDSTLGKLADVVVEI 341
+T TPA GDLL+ SGSG T +V +AE AK+ G ++ A T+ DS L LAD VV I
Sbjct: 85 DTTTPAISAGDLLLVASGSGTTSGVVKSAETAKKAGARIAAFTTNPDSPLAGLADAVVII 144
Query: 342 PGRTKADLPTDYIARQMLTKYKWTAPMGTLFEDSTMIFLDGIIALLMATFQKTEKDMRKK 401
P K D +I+RQ G+LFE + + + L + +++ +
Sbjct: 145 PAAQKTD-HGSHISRQY---------AGSLFEQVLFVVTEAVFQSLWDHTEVEAEELWTR 194
Query: 402 HATLE 406
HA LE
Sbjct: 195 HANLE 199
>pir||H72691 probable hexulose-6-phosphate synthase APE0952 - Aeropyrum pernix
(strain K1) >gi|5104621|dbj|BAA79936.1| (AP000060) 241aa
long hypothetical hexulose-6-phosphate synthase
[Aeropyrum pernix]
Length = 241
Score = 115 bits (284), Expect = 1e-24
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 10/220 (4%)
Query: 2 ILQVALDLTDIEQAISIAEK--AARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRK--I 57
+LQVALD T + A+S+A + A RG A LEVGTPL+K G R R + +
Sbjct: 22 VLQVALDYTSLWDAVSLASRIGARRGVA--LEVGTPLLKAHGARDSVAALRGVAGEEAPV 79
Query: 58 VADLKTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDK 117
V D KT D +E ++ A G D +++ A D T+K A A + G+ V DL+ +D
Sbjct: 80 VVDTKTADASDVEADIVASSGGDAFTVVAAAHDVTLKQAAEAAVQRGVAVYGDLVVSRDP 139
Query: 118 VQRAKELEQMGVHYILVHTGIDEQ----AQGKSPLEDLEKVVKAVKVPVAVAGGLNLETI 173
+ A+ + GVH +L+H G+D Q S ++ + ++ + +AVAGG+
Sbjct: 140 LLDARRVVDAGVHIVLLHLGLDVQRALGLTASSRVDLVRRIASEIDATIAVAGGVKPREA 199
Query: 174 PKVIELGATIIIVGSAITKAKDPEAVTRKIIDLFWDEYMR 213
+ GA+I+I+G AIT + DP K ++ E R
Sbjct: 200 GALASAGASIVIIGGAITGSPDPGREVEKALESLRGEGFR 239
>sp|Q58842|YE47_METJA HYPOTHETICAL PROTEIN MJ1447 >gi|2128863|pir||F64480 hypothetical
protein MJ1447 - Methanococcus jannaschii
>gi|1592092|gb|AAB99456.1| (U67585) D-arabino 3-hexulose
6-phosphate formaldehyde lyase isolog [Methanococcus
jannaschii]
Length = 381
Score = 109 bits (270), Expect = 5e-23
Identities = 73/204 (35%), Positives = 117/204 (56%), Gaps = 10/204 (4%)
Query: 3 LQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVADLK 62
LQ+ALD+ +E + + LE GTPLIKK G+ +E+++ F D IVADLK
Sbjct: 164 LQIALDVPTMENLEFLLQTIPNSDHIILEAGTPLIKKFGLEVIEIMREYF-DGFIVADLK 222
Query: 63 TMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQRAK 122
T+DTG +EV +A A+ V+I GVA TI A+ +K G+ +D++ V + Q+
Sbjct: 223 TLDTGRVEVRLAFEATANAVAISGVAPKSTIIKAIHECQKCGLISYLDMMNVSEP-QKLY 281
Query: 123 ELEQMGVHYILVHTGIDEQAQG-KSPLEDLEKVVKAVKVPVAVAGGLNLETIPKVIELGA 181
+ ++ +++H GIDE+ G K + E + +A+AGG+ +E + ++++
Sbjct: 282 DSLKLKPDVVILHRGIDEETFGIKKEWKFKENCL------LAIAGGVGVENVEELLK-EY 334
Query: 182 TIIIVGSAITKAKDPEAVTRKIID 205
I+IVG AITK+KDP V R I+
Sbjct: 335 QILIVGRAITKSKDPGRVIRMFIN 358
>pir||D69063 conserved hypothetical protein MTH1474 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622589|gb|AAB85949.1| (AE000908) D-arabino
3-hexulose 6-phosphate formaldehyde lyase related
protein [Methanobacterium thermoautotrophicum]
Length = 430
Score = 106 bits (263), Expect = 4e-22
Identities = 76/244 (31%), Positives = 126/244 (51%), Gaps = 31/244 (12%)
Query: 3 LQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVADLK 62
LQVALDL +E+ I LE GTPL+KK G+ V ++ D I+ADLK
Sbjct: 199 LQVALDLDSMEEMERIINTLPDRERILLEAGTPLVKKFGVGVVRRIRELRRDAFIIADLK 258
Query: 63 TMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQRAK 122
T+D G +EV+MAA AD V+I G+ ++I+ A+ A+K GI ++D++ V++ V + +
Sbjct: 259 TLDVGRIEVKMAADETADAVAISGLGTVESIEKAIHEAQKQGIYSILDMMNVENFVDKLR 318
Query: 123 ELEQMGVHYILVHTGIDEQAQGKSPLEDLEKV--------VKAVKVP---VAVAGGLNLE 171
L+ +L+H +D + E+L ++ +K + P VAVAGG+
Sbjct: 319 GLKYK-PDIVLLHRNVDLETLRAERGEELGEMSEWGNIREIKEILGPRGLVAVAGGITPS 377
Query: 172 TIPKVIELGATIIIVGSAITKAKDPEAVTRKIIDLFWDEYMRTIRKAMKDITEHIEEVAD 231
+ + ++ GA II+VG I ++D +R+A +D EH+ + D
Sbjct: 378 KMQEALDSGADIIVVGRYIIGSRD-------------------VRRAAEDFLEHMPQDPD 418
Query: 232 KLKL 235
++L
Sbjct: 419 TMRL 422
>pir||H82483 probable hexulose-6-phosphate synthase SgbH VCA0242 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9657637|gb|AAF96153.1| (AE004364)
hexulose-6-phosphate synthase SgbH, putative [Vibrio
cholerae]
Length = 215
Score = 87.8 bits (214), Expect = 2e-16
Identities = 63/212 (29%), Positives = 107/212 (49%), Gaps = 7/212 (3%)
Query: 2 ILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVADL 61
++Q+ALD T++ A+++A A +EVGT L EGM+AV L+ P+ +V D+
Sbjct: 5 MIQIALDQTNLTDAVAVASNVA-SYVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDM 63
Query: 62 KTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQRA 121
KT D GA+ MA GAD +++ A TI VA + ++ +++ G +Q A
Sbjct: 64 KTTDGGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYG-NWTMQDA 122
Query: 122 KELEQMGVHYILVHTGIDEQAQGKS-PLEDLEKV--VKAVKVPVAVAGGLNLETIPKVIE 178
K +G+ + H D + G +DL+K+ + A+ + +++ GG+ E I
Sbjct: 123 KAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLSALGIELSITGGIVPEDIYLFEG 182
Query: 179 LGATIIIVGSAITKAKDPE--AVTRKIIDLFW 208
+ I G A+ A+ + A R+ ID FW
Sbjct: 183 IKTKTFIAGRALAGAEGQQTAAALREQIDRFW 214
>sp|P39304|SGAH_ECOLI PROBABLE HEXULOSE-6-PHOSPHATE SYNTHASE (HUMPS) (D-ARABINO
3-HEXULOSE 6-PHOSPHATE FORMALDEHYDE LYASE)
>gi|1361156|pir||S56421 hypothetical 23.6K protein
(aidB-rpsF intergenic region) - Escherichia coli
>gi|537037|gb|AAA97092.1| (U14003) ORF_o216 [Escherichia
coli] >gi|1790640|gb|AAC77153.1| (AE000491) probable
hexulose-6-phosphate synthase [Escherichia coli K12]
Length = 216
Score = 83.5 bits (203), Expect = 4e-15
Identities = 64/204 (31%), Positives = 97/204 (47%), Gaps = 5/204 (2%)
Query: 2 ILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVADL 61
+LQVALD ++ A A +EVGT L EG+RAV LK +P + ++AD
Sbjct: 5 MLQVALDNQTMDSAYETTRLIAEE-VDIIEVGTILCVGEGVRAVRDLKALYPHKIVLADA 63
Query: 62 KTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQRA 121
K D G + M AD V+++ AD T K AL VA+++ V ++L G ++A
Sbjct: 64 KIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYW-TWEQA 122
Query: 122 KELEQMGVHYILVHTGIDEQAQGKSPLEDLEKVVKAVK---VPVAVAGGLNLETIPKVIE 178
++ G+ ++ H D QA G + E +K + V V GGL LE +P
Sbjct: 123 QQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLALEDLPLFKG 182
Query: 179 LGATIIIVGSAITKAKDPEAVTRK 202
+ + I G +I A P R+
Sbjct: 183 IPIHVFIAGRSIRDAASPVEAARQ 206
>sp|P75293|SGAH_MYCPN PROBABLE HEXULOSE-6-PHOSPHATE SYNTHASE (HUMPS) (D-ARABINO
3-HEXULOSE 6-PHOSPHATE FORMALDEHYDE LYASE)
>gi|2146312|pir||S73675 hypothetical protein yjfV -
Mycoplasma pneumoniae (strain ATCC 29342)
>gi|1674026|gb|AAB95997.1| (AE000033) 3-hexulose-6-
phosphate synthase [Mycoplasma pneumoniae]
Length = 218
Score = 81.1 bits (197), Expect = 2e-14
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 5/210 (2%)
Query: 2 ILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVADL 61
++Q+ALD + A++ K +EVGT L+ EG+ AV+ + +R+P + IVAD
Sbjct: 5 LIQIALDNLSLASALNDLAKVG-DAVDVIEVGTILLTAEGVNAVKEIAKRYPHKLIVADG 63
Query: 62 KTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKY-GIKVMVDLIGVKDKVQR 120
K DTG + +M GA +++ A+ T+KD + V Y IK + ++
Sbjct: 64 KIADTGKVFNQMFFDAGAHFTTVICAAELPTVKDVVTVGNSYTPIKETQVEMTSNFTWEQ 123
Query: 121 AKELEQMGVHYILVHTGIDEQAQGKS-PLEDLEKVVKAVKV--PVAVAGGLNLETIPKVI 177
+ +Q+GV ++ H D QA G + +DL+ V + + V V GG+ L I
Sbjct: 124 VTQWKQVGVQQVVWHRSRDAQAAGVNWSDKDLQAVKRLADLGFKVTVTGGITLNDIQLFK 183
Query: 178 ELGATIIIVGSAITKAKDPEAVTRKIIDLF 207
++ I I G I A DP ++ D F
Sbjct: 184 DIPIYIFIAGRTIRDASDPLQTVQQFKDEF 213
>dbj|BAA97462.1| (AB025603) gene_id:F17P19.9~similar to unknown protein~sp|P42404
[Arabidopsis thaliana]
Length = 208
Score = 81.1 bits (197), Expect = 2e-14
Identities = 51/161 (31%), Positives = 83/161 (50%), Gaps = 7/161 (4%)
Query: 249 NKIFIYGAGRSGLVGKAFAMRLMHLDFNVYVVGETITPAFEEGDLLIAISGSGETRTIVD 308
++IF+YG GR GL+ KAFAMRL H ++V + TP DLLIA +G G T+
Sbjct: 52 SRIFLYGVGREGLMLKAFAMRLFHFGLPTHLVFDMTTPPISSSDLLIASAGPGGFSTVDA 111
Query: 309 AAEIAKQQGGKVVAITSYRDSTLG---KLADVVVEIPGRTKADLPTDYIARQMLTKYKWT 365
+AK G KV+ IT+ + +G K A V +P +T A + +M +
Sbjct: 112 LCSVAKSNGAKVILITA--EPAIGSCVKHATDVCYVPAQTMASDNGGGDSVEM--GERRL 167
Query: 366 APMGTLFEDSTMIFLDGIIALLMATFQKTEKDMRKKHATLE 406
PMG+++E + + + ++ L ++ + +R +H LE
Sbjct: 168 LPMGSVYEGALFVLFEMVVYKLGEVLGESSESVRARHTNLE 208
>sp|P37678|SGBH_ECOLI PROBABLE HEXULOSE-6-PHOSPHATE SYNTHASE (HUMPS) (D-ARABINO
3-HEXULOSE 6-PHOSPHATE FORMALDEHYDE LYASE)
>gi|1073494|pir||S47802 hypothetical 23.4K protein
(avtA-selB intergenic region) - Escherichia coli
>gi|466719|gb|AAB18558.1| (U00039) No definition line
found [Escherichia coli] >gi|1790006|gb|AAC76605.1|
(AE000435) probable 3-hexulose 6-phosphate synthase
[Escherichia coli K12]
Length = 220
Score = 80.8 bits (196), Expect = 3e-14
Identities = 61/213 (28%), Positives = 105/213 (48%), Gaps = 8/213 (3%)
Query: 2 ILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVADL 61
+LQ+ALD + +E A + +E GT L EG+ AV+ L+ + PD+ IVAD
Sbjct: 5 LLQLALDHSSLEAAQRDVT-LLKDSVDIVEAGTILCLNEGLGAVKALREQCPDKIIVADW 63
Query: 62 KTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQRA 121
K D G + A GA+ ++I+ A T++ A+A++ G ++ ++L G + A
Sbjct: 64 KVADAGETLAQQAFGAGANWMTIICAAPLATVEKGHAMAQRCGGEIQIELFG-NWTLDDA 122
Query: 122 KELEQMGVHYILVHTGIDEQAQGKSPLE-DLE--KVVKAVKVPVAVAGGLNLETIPKVIE 178
++ ++GV + H G D QA G+ E DL K + + + +++ GG+ +P +
Sbjct: 123 RDWHRIGVRQAIYHRGRDAQASGQQWGEADLARMKALSDIGLELSITGGITPADLPLFKD 182
Query: 179 LGATIIIVGSAITKAKDPEAVTRKI---IDLFW 208
+ I G A+ A +P V ID W
Sbjct: 183 IRVKAFIAGRALAGAANPAQVAGDFHAQIDAIW 215
>sp|P44988|SGBH_HAEIN PROBABLE HEXULOSE-6-PHOSPHATE SYNTHASE (HUMPS) (D-ARABINO
3-HEXULOSE 6-PHOSPHATE FORMALDEHYDE LYASE)
>gi|1074610|pir||F64164 hypothetical protein HI1024 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574056|gb|AAC22684.1| (U32783) hexulose-6-phosphate
synthase, putative [Haemophilus influenzae Rd]
Length = 225
Score = 73.0 bits (176), Expect = 6e-12
Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 18/181 (9%)
Query: 2 ILQVALDLTDIEQAISIAEKAARGGAHWLEVGTPLIKKEGMRAVELLKRRFPDRKIVADL 61
+LQ+ALD +E A+ + K +EVGT L EGMRAV +L+ +P++ +V DL
Sbjct: 5 LLQIALDAQYLETAL-VDVKQIEHNIDIIEVGTILACSEGMRAVRILRALYPNQILVCDL 63
Query: 62 KTMDTGALEVEMAARHGADVVSILGVADDKTIKDALAVARKYGIKVMVDLIGVKDKVQ-- 119
KT D GA +MA GAD +++ A T VA ++ K+ +L GV ++Q
Sbjct: 64 KTTDAGATLAKMAFEAGADWLTVSAAAHPATKAACQKVAEEFN-KIQPNL-GVPKEIQIE 121
Query: 120 --------RAKELEQMGVHYILVHTGIDEQAQGKS----PLEDLEKVVKAVKVPVAVAGG 167
K Q+G+ + H D + G S +E++EK + ++ + +++ GG
Sbjct: 122 LYGNWNFDEVKNWLQLGIKQAIYHRSRDAELSGLSWSNQDIENIEK-LDSLGIELSITGG 180
Query: 168 L 168
+
Sbjct: 181 I 181
>sp|P77245|YFET_ECOLI HYPOTHETICAL 31.2 KDA PROTEIN IN CYSP-AMIA INTERGENIC REGION
>gi|7445060|pir||B65017 hypothetical protein b2427 -
Escherichia coli (strain K-12)
>gi|1788767|gb|AAC75480.1| (AE000330) orf, hypothetical
protein [Escherichia coli K12]
>gi|1799856|dbj|BAA16310.1| (D90872) similar to
[SwissProt Accession Number P37767] [Escherichia coli]
Length = 285
Score = 69.1 bits (166), Expect = 9e-11
Identities = 53/172 (30%), Positives = 87/172 (49%), Gaps = 21/172 (12%)
Query: 181 ATIIIVGSAITKAKDPEAVTRKIIDLFWDEYMRTIRKAMKDITEHIEEVADKLKLEEVRG 240
AT + + S+IT E + RK+ K++ +E+ L ++
Sbjct: 83 ATALHLHSSITSDDSLEVIARKL-------------NREKELA--LEQTCALLDYARLQK 127
Query: 241 LVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLDFNVYV-----VGETITPAFEEGDLLI 295
+++ + A I I G G S LVG+ + +LM + + V V T++ A ++GD+ I
Sbjct: 128 IIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQI 187
Query: 296 AISGSGETRTIVDAAEIAKQQGGKVVAITSYRDSTLGKLADVVVE-IPGRTK 346
AIS SG + IV AE A++QG V+AITS DS L +LA ++ + G T+
Sbjct: 188 AISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.137 0.375
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134215162
Number of Sequences: 2977
Number of extensions: 5441574
Number of successful extensions: 18267
Number of sequences better than 1.0e-10: 29
Number of HSP's better than 0.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 18217
Number of HSP's gapped (non-prelim): 31
length of query: 406
length of database: 189,106,746
effective HSP length: 60
effective length of query: 346
effective length of database: 153,197,526
effective search space: 53006343996
effective search space used: 53006343996
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 166 (69.1 bits)