BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1249 (PAB1249) DE:Hypothetical protein
         (213 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||H75015 probable phosphoesterase (EC 3.1.-.-) PAB1249 - Pyro...   435  e-121
pir||C71456 probable phosphoesterase (EC 3.1.-.-) PH0305 - Pyroc...   352  2e-96
pir||S41581 probable phosphoesterase (EC 3.1.-.-) U - Methanothe...   188  5e-47
pir||H69118 probable phosphoesterase (EC 3.1.-.-) MTH1882 - Meth...   175  3e-43
pir||A64445 probable phosphoesterase (EC 3.1.-.-) MJ1162 - Metha...   149  3e-35
gi|11498144 conserved hypothetical protein [Archaeoglobus fulgid...   117  1e-25
pir||G72454 hypothetical protein APE2283 - Aeropyrum pernix (str...    98  9e-20
gb|AAK42406.1| Conserved hypothetical protein [Sulfolobus solfat...    80  3e-14
gb|AAK42264.1| Hypothetical protein [Sulfolobus solfataricus]          79  5e-14
pir||S73080 hypothetical protein c0613 - Sulfolobus solfataricus...    79  5e-14
gb|AAK42836.1| Hypothetical protein [Sulfolobus solfataricus]          78  8e-14
gb|AAK42840.1| Hypothetical protein [Sulfolobus solfataricus]          69  4e-11

>pir||H75015 probable phosphoesterase (EC 3.1.-.-) PAB1249 - Pyrococcus abyssi
           (strain Orsay) >gi|5459080|emb|CAB50566.1| (AJ248288)
           hypothetical protein [Pyrococcus abyssi]
           Length = 213
           
 Score =  435 bits (1107), Expect = e-121
 Identities = 213/213 (100%), Positives = 213/213 (100%)

Query: 1   MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLNIRV 60
           MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLNIRV
Sbjct: 1   MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLNIRV 60

Query: 61  LAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYSS 120
           LAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYSS
Sbjct: 61  LAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYSS 120

Query: 121 LKKNYKQGDIVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEARGID 180
           LKKNYKQGDIVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEARGID
Sbjct: 121 LKKNYKQGDIVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEARGID 180

Query: 181 EIGDTVIVNPGPLSRGYYAIVDTKTWSVELERL 213
           EIGDTVIVNPGPLSRGYYAIVDTKTWSVELERL
Sbjct: 181 EIGDTVIVNPGPLSRGYYAIVDTKTWSVELERL 213


>pir||C71456 probable phosphoesterase (EC 3.1.-.-) PH0305 - Pyrococcus
           horikoshii >gi|3256695|dbj|BAA29378.1| (AP000001) 213aa
           long hypothetical protein [Pyrococcus horikoshii]
           Length = 213
           
 Score =  352 bits (893), Expect = 2e-96
 Identities = 156/213 (73%), Positives = 194/213 (90%)

Query: 1   MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLNIRV 60
           M+IVAVTDIHGN  S VALA +++ +  EL+LIAGDITHF  G++A+QILEPLL+L +RV
Sbjct: 1   MRIVAVTDIHGNMASTVALANILKKIEAELLLIAGDITHFSGGEIAKQILEPLLKLGVRV 60

Query: 61  LAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYSS 120
           LA+MGNCDG+DVP++L+ LGINVHN RV+VK+ GVVG GGS+VTPFSTIWEFS++EIYSS
Sbjct: 61  LAVMGNCDGKDVPKVLDELGINVHNARVEVKKVGVVGFGGSSVTPFSTIWEFSEEEIYSS 120

Query: 121 LKKNYKQGDIVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEARGID 180
           LK+NY+ GDIVLTH+PPY T++D+TFSG+HAGSKGLR F+EEEQPPICICGHIHEARGID
Sbjct: 121 LKRNYRSGDIVLTHAPPYRTRIDKTFSGIHAGSKGLRKFIEEEQPPICICGHIHEARGID 180

Query: 181 EIGDTVIVNPGPLSRGYYAIVDTKTWSVELERL 213
           +IG+T++VNPGPLSR YYA++D++TW V+LERL
Sbjct: 181 KIGETLVVNPGPLSRRYYAVIDSETWEVKLERL 213


>pir||S41581 probable phosphoesterase (EC 3.1.-.-) U - Methanothermus fervidus
           Length = 212
           
 Score =  188 bits (472), Expect = 5e-47
 Identities = 95/204 (46%), Positives = 139/204 (67%), Gaps = 7/204 (3%)

Query: 1   MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLNIRV 60
           MKI+ ++D+HG    ++ L  + E++  +LI+++GDIT FG  ++AE+IL  L   N+ V
Sbjct: 1   MKILGISDLHGK---LLELNNLNEEI--DLIIVSGDITDFGPVELAEKILNKLTSYNVPV 55

Query: 61  LAIMGNCDGRDVPRILERLG-INVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYS 119
           LA+ GNCD  +   I+E+ G IN+HN  +++K   + G GGSN TPF T +EF + EIY+
Sbjct: 56  LALPGNCDLPETVDIIEKSGTINIHNNAIEIKGIKICGFGGSNPTPFDTPFEFQEKEIYN 115

Query: 120 SLKKNY-KQGDIVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEARG 178
           SLK    K   I++TH+PPYNTK+D+  SG + GSK +R  +EE QP + IC HIHEARG
Sbjct: 116 SLKNIISKDTTILVTHAPPYNTKVDQIQSGDNVGSKSIRKIIEEYQPKVNICAHIHEARG 175

Query: 179 IDEIGDTVIVNPGPLSRGYYAIVD 202
           ID++G+T I+N GP   G  A++D
Sbjct: 176 IDQLGNTTIINTGPAFEGKVAVID 199


>pir||H69118 probable phosphoesterase (EC 3.1.-.-) MTH1882 - Methanobacterium
           thermoautotrophicum (strain Delta H)
           >gi|2623020|gb|AAB86348.1| (AE000940) conserved protein
           [Methanobacterium thermoautotrophicum]
           Length = 223
           
 Score =  175 bits (440), Expect = 3e-43
 Identities = 94/208 (45%), Positives = 137/208 (65%), Gaps = 8/208 (3%)

Query: 1   MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLNIRV 60
           MKI+AV+D+HG+  ++  L   +++ R ++I++AGDITHFG  ++AE++L  L    I V
Sbjct: 1   MKILAVSDLHGS--NIPELHSYLKNNRVDIIVVAGDITHFGPPELAEELLNDLASHKIPV 58

Query: 61  LAIMGNCDGRDVP-RILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYS 119
           +A+ GNCD   +  RI     IN+H + + VK     GLGGSN TPF+T  E  +DEI S
Sbjct: 59  VAVPGNCDPHGIASRIENSRAINIHARTLSVKNVTFCGLGGSNPTPFNTPLELGEDEIRS 118

Query: 120 SLKK---NYKQGD--IVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIH 174
            L K   N K  D  I++TH+PP+ T +DR  SG + GS G+R  +E+ QP I ICGHIH
Sbjct: 119 ELDKLLENLKGNDRLILVTHAPPHGTGVDRIPSGDNVGSTGVRDVIEKHQPCINICGHIH 178

Query: 175 EARGIDEIGDTVIVNPGPLSRGYYAIVD 202
           E+ G++ +G+T+IVNPG LS G  A+++
Sbjct: 179 ESPGVERLGETLIVNPGQLSEGRAALIE 206


>pir||A64445 probable phosphoesterase (EC 3.1.-.-) MJ1162 - Methanococcus
           jannaschii >gi|1591788|gb|AAB99164.1| (U67558) conserved
           hypothetical protein [Methanococcus jannaschii]
           Length = 218
           
 Score =  149 bits (372), Expect = 3e-35
 Identities = 89/220 (40%), Positives = 129/220 (58%), Gaps = 20/220 (9%)

Query: 1   MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLN--I 58
           MKIV +TD+HG     V   K   D+    +++ GDITHFG G    +++E L  L+  +
Sbjct: 5   MKIVGITDLHGKLPPAVREFKDFADV----LVVCGDITHFGKGI---EVIEKLAELSDYM 57

Query: 59  RVLAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIY 118
            VL + GNCD ++V   L    +N+  K  K++    VG+GGSN TPF+T  E++++EIY
Sbjct: 58  EVLCVPGNCDTKEVIDELNSFKLNIDRKVKKIENINFVGIGGSNKTPFNTPNEYTEEEIY 117

Query: 119 SSL---KKNYKQGDIVLTHSPPYNTKLD--RTFSGVHAGSKGLRMFLEE--EQPPICICG 171
           + L    KN K    +++H+PPYNT  D       +H GSK +R  +E+  E    C CG
Sbjct: 118 NKLINVVKNLK-NIFLVSHAPPYNTMADIVDLDKDIHVGSKSIRKIIEDFNENIRFCACG 176

Query: 172 HIHEARGIDEIGDTVIVNPGPLSRGYYAIVDTKTWSVELE 211
           HIHE+R ID+IG+T++VNP P S   Y + DTK   V L+
Sbjct: 177 HIHESRCIDKIGNTIVVNPSPKS---YFVYDTKKNMVVLD 213


>gi|11498144 conserved hypothetical protein [Archaeoglobus fulgidus]
           >gi|7447472|pir||E69316 probable phosphoesterase (EC
           3.1.-.-) AF0533 - Archaeoglobus fulgidus
           >gi|2650087|gb|AAB90701.1| (AE001067) conserved
           hypothetical protein [Archaeoglobus fulgidus]
           Length = 206
           
 Score =  117 bits (290), Expect = 1e-25
 Identities = 77/217 (35%), Positives = 122/217 (55%), Gaps = 15/217 (6%)

Query: 1   MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFG--DGKVAEQILEPLLRLNI 58
           M+++ ++DIH    S   L K+++    + + IAGD+T F   D KV ++I+        
Sbjct: 1   MRVLLLSDIHS---STQNLEKILKAAEYDAVFIAGDLTQFRPKDAKVVDEIIS---EQTD 54

Query: 59  RVLAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIY 118
             LA+ GNCD   +     +    +H K V+     V G+GGS +TPF+T  E+++ EI 
Sbjct: 55  SCLAVHGNCDHEAILGEKYKALKFIHGKSVEFDGYTVHGVGGSGITPFNTPSEYTEREIL 114

Query: 119 SSLKKNYKQGD--IVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEA 176
             +  N+   D  I+L+H PP    LDRT+SGVHAG + +R  + E    + +CGHIHE+
Sbjct: 115 E-IMDNFVLRDFNILLSHCPPKGF-LDRTYSGVHAGCEAIRERMIEFD--VILCGHIHES 170

Query: 177 RGIDEIGDTVIVNPGPLSRGYYAIVDTKTWSVELERL 213
            G+ +    +IVNPGP+  G +A++D +   VEL +L
Sbjct: 171 HGVVD-SPQLIVNPGPVMWGRFAVIDVEKKVVELRKL 206


>pir||G72454 hypothetical protein APE2283 - Aeropyrum pernix (strain K1)
           >gi|5105984|dbj|BAA81295.1| (AP000064) 251aa long
           hypothetical protein [Aeropyrum pernix]
           Length = 251
           
 Score = 97.9 bits (240), Expect = 9e-20
 Identities = 70/201 (34%), Positives = 103/201 (50%), Gaps = 16/201 (7%)

Query: 3   IVAVTDIHGNKGSVVALAKVIEDL--RPELILIAGDITHFGDGKVAEQILEPLLRLNIRV 60
           I+ V+DIH    S+  L  +I  L  +P  +   GD   F   K A  I+E   R  + +
Sbjct: 51  ILHVSDIHC---SLRRLEDIISSLPVKPSTVAATGD---FECEKAAVAIVEWSRREGVPL 104

Query: 61  LAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYSS 120
           +A+ GN D   V R+L   G+ +  +  +V      G+GG +          S + +  S
Sbjct: 105 VAVTGNLDHAGVRRVLRSAGVLMDGRVDRVGGLVFGGVGGMDPRT-------SMEMLLRS 157

Query: 121 LKKNYKQGDIVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEARGID 180
           L+ +    D++LTH PP+   LD TF+GV AG   LR  ++  +P   + GHIHE+ GI+
Sbjct: 158 LESSGLTVDVLLTHHPPHGV-LDTTFAGVRAGLHDLRSLVDSLKPRAHLFGHIHESPGIE 216

Query: 181 EIGDTVIVNPGPLSRGYYAIV 201
            IG TV VNPGP   G YA+V
Sbjct: 217 SIGGTVFVNPGPAYEGRYALV 237


>gb|AAK42406.1| Conserved hypothetical protein [Sulfolobus solfataricus]
           Length = 325
           
 Score = 79.6 bits (193), Expect = 3e-14
 Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 22/118 (18%)

Query: 95  VVGLGGSNVTPFSTIWEFSDDEIYSSLKK------NYKQGDIVLTHSPPYNTKLDRT--- 145
           +V  G  N TP++T  E  +++IYS L K      NY +  I   H+PPYNT LD     
Sbjct: 181 IVSYGYVNPTPWNTFREKKEEDIYSDLSKIVSKINNYSKA-IYNFHAPPYNTNLDNAPLL 239

Query: 146 ------------FSGVHAGSKGLRMFLEEEQPPICICGHIHEARGIDEIGDTVIVNPG 191
                           H GSK +R  +EE +P + + GHIHE+RG D+I +T+++NPG
Sbjct: 240 DENLKPIIRGGEIVYTHVGSKSIRKIIEETKPLLGLHGHIHESRGFDKINNTIVINPG 297


>gb|AAK42264.1| Hypothetical protein [Sulfolobus solfataricus]
           Length = 316
           
 Score = 78.8 bits (191), Expect = 5e-14
 Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 14/196 (7%)

Query: 9   IHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAE--QILEPLLRLNIRVLAIMGN 66
           +   K  VV   +VIED++ +   +   +      +++   +I E + RL  +V     +
Sbjct: 80  LRSGKYIVVDKKEVIEDIKSDKSKLEKIVIEKASEQMSRWVKIAEEIFRLE-KVFWSPAH 138

Query: 67  CDGRDVPRILERLGINVHNKRV-KVKETGVVGLG-GSNVTPFSTIWEFSDDEIYSSLKKN 124
            D   +  IL+  G N+ N+ V  ++E  +V LG GS +   ++  E  D E+Y   K  
Sbjct: 139 GDIPQLDSILKNYGSNLINENVINLEEIQIVSLGFGSPIG--NSYREIPDSELYIKGKSL 196

Query: 125 YKQGD----IVLTHSPPYNTKLDRTFSGV---HAGSKGLRMFLEEEQPPICICGHIHEAR 177
            K  D    I+  H PP NTKLD    G+   H GSK +   + E QP I + GH+HE+ 
Sbjct: 197 LKDADKERLIMNFHMPPLNTKLDNAKVGLRKSHVGSKAVLDLITEFQPIISLHGHVHEST 256

Query: 178 GIDEIGDTVIVNPGPL 193
            +D++G+T+ +NPG L
Sbjct: 257 SMDKVGETIAINPGSL 272


>pir||S73080 hypothetical protein c0613 - Sulfolobus solfataricus
           >gi|1707692|emb|CAA69496.1| (Y08256) orf c06013
           [Sulfolobus solfataricus]
           Length = 309
           
 Score = 78.8 bits (191), Expect = 5e-14
 Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 14/196 (7%)

Query: 9   IHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAE--QILEPLLRLNIRVLAIMGN 66
           +   K  VV   +VIED++ +   +   +      +++   +I E + RL  +V     +
Sbjct: 73  LRSGKYIVVDKKEVIEDIKSDKSKLEKIVIEKASEQMSRWVKIAEEIFRLE-KVFWSPAH 131

Query: 67  CDGRDVPRILERLGINVHNKRV-KVKETGVVGLG-GSNVTPFSTIWEFSDDEIYSSLKKN 124
            D   +  IL+  G N+ N+ V  ++E  +V LG GS +   ++  E  D E+Y   K  
Sbjct: 132 GDIPQLDSILKNYGSNLINENVINLEEIQIVSLGFGSPIG--NSYREIPDSELYIKGKSL 189

Query: 125 YKQGD----IVLTHSPPYNTKLDRTFSGV---HAGSKGLRMFLEEEQPPICICGHIHEAR 177
            K  D    I+  H PP NTKLD    G+   H GSK +   + E QP I + GH+HE+ 
Sbjct: 190 LKDADKERLIMNFHMPPLNTKLDNAKVGLRKSHVGSKAVLDLITEFQPIISLHGHVHEST 249

Query: 178 GIDEIGDTVIVNPGPL 193
            +D++G+T+ +NPG L
Sbjct: 250 SMDKVGETIAINPGSL 265


>gb|AAK42836.1| Hypothetical protein [Sulfolobus solfataricus]
           Length = 324
           
 Score = 78.0 bits (189), Expect = 8e-14
 Identities = 57/164 (34%), Positives = 83/164 (49%), Gaps = 24/164 (14%)

Query: 51  EPLLRLNIRVLAIMGNCDGR---DVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFS 107
           E L   N+++   +GN D     DV    ER+ +    + V +    ++  G  N TP++
Sbjct: 134 EKLKGTNLKIYTNLGNDDPLYMFDVITKSERM-VKCEGEIVNINGYEMITFGYVNPTPWN 192

Query: 108 TIWEFSDDEIYSSLKKNY-KQGDIVLT----HSPPYNTKLD------RTFSGV------- 149
           T  E ++D+IYS+LK+   K G+   T    H+PPY T LD      +T   V       
Sbjct: 193 TPREMTEDQIYSNLKRIIEKVGNPAKTIFNLHAPPYGTNLDNAPLLDKTLKPVVKNGEIV 252

Query: 150 --HAGSKGLRMFLEEEQPPICICGHIHEARGIDEIGDTVIVNPG 191
             H GS  +R   EE QP + I GHIHE+R  D+I  T+I+NPG
Sbjct: 253 MTHVGSMSIRKLEEEFQPLLGIHGHIHESRAFDKINKTIIINPG 296


>gb|AAK42840.1| Hypothetical protein [Sulfolobus solfataricus]
           Length = 302
           
 Score = 69.1 bits (166), Expect = 4e-11
 Identities = 41/112 (36%), Positives = 66/112 (58%), Gaps = 11/112 (9%)

Query: 101 SNVTPFSTIWEFSDDEIYSS----LKKNYKQGDIVLT-HSPPYNTKLDRTFSG---VHAG 152
           +N TP+ +     +  IY+     LKK  +  +++   H+PPYNT+LD  +     +H G
Sbjct: 168 TNETPYKSYRVAPEYIIYNKGHEMLKKINETKNVIFNFHAPPYNTRLDNAYVNGQWIHVG 227

Query: 153 SKGLRMFLEEEQPPICICGHIHEARGIDEIGDTVIVNPGPL-SRGY--YAIV 201
           S+ +R   E+ QP + + GHIHE+  ID+IG T+++NPG + S G   YAI+
Sbjct: 228 SRSVRELEEKFQPLLGLHGHIHESSAIDKIGKTLVINPGSMYSEGVLKYAII 279


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.319    0.141    0.417 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86447002
Number of Sequences: 2977
Number of extensions: 3693214
Number of successful extensions: 7620
Number of sequences better than 1.0e-10: 12
Number of HSP's better than  0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7588
Number of HSP's gapped (non-prelim): 16
length of query: 213
length of database: 189,106,746
effective HSP length: 52
effective length of query: 161
effective length of database: 157,985,422
effective search space: 25435652942
effective search space used: 25435652942
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 163 (67.9 bits)