BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1249 (PAB1249) DE:Hypothetical protein
(213 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75015 probable phosphoesterase (EC 3.1.-.-) PAB1249 - Pyro... 435 e-121
pir||C71456 probable phosphoesterase (EC 3.1.-.-) PH0305 - Pyroc... 352 2e-96
pir||S41581 probable phosphoesterase (EC 3.1.-.-) U - Methanothe... 188 5e-47
pir||H69118 probable phosphoesterase (EC 3.1.-.-) MTH1882 - Meth... 175 3e-43
pir||A64445 probable phosphoesterase (EC 3.1.-.-) MJ1162 - Metha... 149 3e-35
gi|11498144 conserved hypothetical protein [Archaeoglobus fulgid... 117 1e-25
pir||G72454 hypothetical protein APE2283 - Aeropyrum pernix (str... 98 9e-20
gb|AAK42406.1| Conserved hypothetical protein [Sulfolobus solfat... 80 3e-14
gb|AAK42264.1| Hypothetical protein [Sulfolobus solfataricus] 79 5e-14
pir||S73080 hypothetical protein c0613 - Sulfolobus solfataricus... 79 5e-14
gb|AAK42836.1| Hypothetical protein [Sulfolobus solfataricus] 78 8e-14
gb|AAK42840.1| Hypothetical protein [Sulfolobus solfataricus] 69 4e-11
>pir||H75015 probable phosphoesterase (EC 3.1.-.-) PAB1249 - Pyrococcus abyssi
(strain Orsay) >gi|5459080|emb|CAB50566.1| (AJ248288)
hypothetical protein [Pyrococcus abyssi]
Length = 213
Score = 435 bits (1107), Expect = e-121
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLNIRV 60
MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLNIRV
Sbjct: 1 MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLNIRV 60
Query: 61 LAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYSS 120
LAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYSS
Sbjct: 61 LAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYSS 120
Query: 121 LKKNYKQGDIVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEARGID 180
LKKNYKQGDIVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEARGID
Sbjct: 121 LKKNYKQGDIVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEARGID 180
Query: 181 EIGDTVIVNPGPLSRGYYAIVDTKTWSVELERL 213
EIGDTVIVNPGPLSRGYYAIVDTKTWSVELERL
Sbjct: 181 EIGDTVIVNPGPLSRGYYAIVDTKTWSVELERL 213
>pir||C71456 probable phosphoesterase (EC 3.1.-.-) PH0305 - Pyrococcus
horikoshii >gi|3256695|dbj|BAA29378.1| (AP000001) 213aa
long hypothetical protein [Pyrococcus horikoshii]
Length = 213
Score = 352 bits (893), Expect = 2e-96
Identities = 156/213 (73%), Positives = 194/213 (90%)
Query: 1 MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLNIRV 60
M+IVAVTDIHGN S VALA +++ + EL+LIAGDITHF G++A+QILEPLL+L +RV
Sbjct: 1 MRIVAVTDIHGNMASTVALANILKKIEAELLLIAGDITHFSGGEIAKQILEPLLKLGVRV 60
Query: 61 LAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYSS 120
LA+MGNCDG+DVP++L+ LGINVHN RV+VK+ GVVG GGS+VTPFSTIWEFS++EIYSS
Sbjct: 61 LAVMGNCDGKDVPKVLDELGINVHNARVEVKKVGVVGFGGSSVTPFSTIWEFSEEEIYSS 120
Query: 121 LKKNYKQGDIVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEARGID 180
LK+NY+ GDIVLTH+PPY T++D+TFSG+HAGSKGLR F+EEEQPPICICGHIHEARGID
Sbjct: 121 LKRNYRSGDIVLTHAPPYRTRIDKTFSGIHAGSKGLRKFIEEEQPPICICGHIHEARGID 180
Query: 181 EIGDTVIVNPGPLSRGYYAIVDTKTWSVELERL 213
+IG+T++VNPGPLSR YYA++D++TW V+LERL
Sbjct: 181 KIGETLVVNPGPLSRRYYAVIDSETWEVKLERL 213
>pir||S41581 probable phosphoesterase (EC 3.1.-.-) U - Methanothermus fervidus
Length = 212
Score = 188 bits (472), Expect = 5e-47
Identities = 95/204 (46%), Positives = 139/204 (67%), Gaps = 7/204 (3%)
Query: 1 MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLNIRV 60
MKI+ ++D+HG ++ L + E++ +LI+++GDIT FG ++AE+IL L N+ V
Sbjct: 1 MKILGISDLHGK---LLELNNLNEEI--DLIIVSGDITDFGPVELAEKILNKLTSYNVPV 55
Query: 61 LAIMGNCDGRDVPRILERLG-INVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYS 119
LA+ GNCD + I+E+ G IN+HN +++K + G GGSN TPF T +EF + EIY+
Sbjct: 56 LALPGNCDLPETVDIIEKSGTINIHNNAIEIKGIKICGFGGSNPTPFDTPFEFQEKEIYN 115
Query: 120 SLKKNY-KQGDIVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEARG 178
SLK K I++TH+PPYNTK+D+ SG + GSK +R +EE QP + IC HIHEARG
Sbjct: 116 SLKNIISKDTTILVTHAPPYNTKVDQIQSGDNVGSKSIRKIIEEYQPKVNICAHIHEARG 175
Query: 179 IDEIGDTVIVNPGPLSRGYYAIVD 202
ID++G+T I+N GP G A++D
Sbjct: 176 IDQLGNTTIINTGPAFEGKVAVID 199
>pir||H69118 probable phosphoesterase (EC 3.1.-.-) MTH1882 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2623020|gb|AAB86348.1| (AE000940) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 223
Score = 175 bits (440), Expect = 3e-43
Identities = 94/208 (45%), Positives = 137/208 (65%), Gaps = 8/208 (3%)
Query: 1 MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLNIRV 60
MKI+AV+D+HG+ ++ L +++ R ++I++AGDITHFG ++AE++L L I V
Sbjct: 1 MKILAVSDLHGS--NIPELHSYLKNNRVDIIVVAGDITHFGPPELAEELLNDLASHKIPV 58
Query: 61 LAIMGNCDGRDVP-RILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYS 119
+A+ GNCD + RI IN+H + + VK GLGGSN TPF+T E +DEI S
Sbjct: 59 VAVPGNCDPHGIASRIENSRAINIHARTLSVKNVTFCGLGGSNPTPFNTPLELGEDEIRS 118
Query: 120 SLKK---NYKQGD--IVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIH 174
L K N K D I++TH+PP+ T +DR SG + GS G+R +E+ QP I ICGHIH
Sbjct: 119 ELDKLLENLKGNDRLILVTHAPPHGTGVDRIPSGDNVGSTGVRDVIEKHQPCINICGHIH 178
Query: 175 EARGIDEIGDTVIVNPGPLSRGYYAIVD 202
E+ G++ +G+T+IVNPG LS G A+++
Sbjct: 179 ESPGVERLGETLIVNPGQLSEGRAALIE 206
>pir||A64445 probable phosphoesterase (EC 3.1.-.-) MJ1162 - Methanococcus
jannaschii >gi|1591788|gb|AAB99164.1| (U67558) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 218
Score = 149 bits (372), Expect = 3e-35
Identities = 89/220 (40%), Positives = 129/220 (58%), Gaps = 20/220 (9%)
Query: 1 MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAEQILEPLLRLN--I 58
MKIV +TD+HG V K D+ +++ GDITHFG G +++E L L+ +
Sbjct: 5 MKIVGITDLHGKLPPAVREFKDFADV----LVVCGDITHFGKGI---EVIEKLAELSDYM 57
Query: 59 RVLAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIY 118
VL + GNCD ++V L +N+ K K++ VG+GGSN TPF+T E++++EIY
Sbjct: 58 EVLCVPGNCDTKEVIDELNSFKLNIDRKVKKIENINFVGIGGSNKTPFNTPNEYTEEEIY 117
Query: 119 SSL---KKNYKQGDIVLTHSPPYNTKLD--RTFSGVHAGSKGLRMFLEE--EQPPICICG 171
+ L KN K +++H+PPYNT D +H GSK +R +E+ E C CG
Sbjct: 118 NKLINVVKNLK-NIFLVSHAPPYNTMADIVDLDKDIHVGSKSIRKIIEDFNENIRFCACG 176
Query: 172 HIHEARGIDEIGDTVIVNPGPLSRGYYAIVDTKTWSVELE 211
HIHE+R ID+IG+T++VNP P S Y + DTK V L+
Sbjct: 177 HIHESRCIDKIGNTIVVNPSPKS---YFVYDTKKNMVVLD 213
>gi|11498144 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7447472|pir||E69316 probable phosphoesterase (EC
3.1.-.-) AF0533 - Archaeoglobus fulgidus
>gi|2650087|gb|AAB90701.1| (AE001067) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 206
Score = 117 bits (290), Expect = 1e-25
Identities = 77/217 (35%), Positives = 122/217 (55%), Gaps = 15/217 (6%)
Query: 1 MKIVAVTDIHGNKGSVVALAKVIEDLRPELILIAGDITHFG--DGKVAEQILEPLLRLNI 58
M+++ ++DIH S L K+++ + + IAGD+T F D KV ++I+
Sbjct: 1 MRVLLLSDIHS---STQNLEKILKAAEYDAVFIAGDLTQFRPKDAKVVDEIIS---EQTD 54
Query: 59 RVLAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIY 118
LA+ GNCD + + +H K V+ V G+GGS +TPF+T E+++ EI
Sbjct: 55 SCLAVHGNCDHEAILGEKYKALKFIHGKSVEFDGYTVHGVGGSGITPFNTPSEYTEREIL 114
Query: 119 SSLKKNYKQGD--IVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEA 176
+ N+ D I+L+H PP LDRT+SGVHAG + +R + E + +CGHIHE+
Sbjct: 115 E-IMDNFVLRDFNILLSHCPPKGF-LDRTYSGVHAGCEAIRERMIEFD--VILCGHIHES 170
Query: 177 RGIDEIGDTVIVNPGPLSRGYYAIVDTKTWSVELERL 213
G+ + +IVNPGP+ G +A++D + VEL +L
Sbjct: 171 HGVVD-SPQLIVNPGPVMWGRFAVIDVEKKVVELRKL 206
>pir||G72454 hypothetical protein APE2283 - Aeropyrum pernix (strain K1)
>gi|5105984|dbj|BAA81295.1| (AP000064) 251aa long
hypothetical protein [Aeropyrum pernix]
Length = 251
Score = 97.9 bits (240), Expect = 9e-20
Identities = 70/201 (34%), Positives = 103/201 (50%), Gaps = 16/201 (7%)
Query: 3 IVAVTDIHGNKGSVVALAKVIEDL--RPELILIAGDITHFGDGKVAEQILEPLLRLNIRV 60
I+ V+DIH S+ L +I L +P + GD F K A I+E R + +
Sbjct: 51 ILHVSDIHC---SLRRLEDIISSLPVKPSTVAATGD---FECEKAAVAIVEWSRREGVPL 104
Query: 61 LAIMGNCDGRDVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFSTIWEFSDDEIYSS 120
+A+ GN D V R+L G+ + + +V G+GG + S + + S
Sbjct: 105 VAVTGNLDHAGVRRVLRSAGVLMDGRVDRVGGLVFGGVGGMDPRT-------SMEMLLRS 157
Query: 121 LKKNYKQGDIVLTHSPPYNTKLDRTFSGVHAGSKGLRMFLEEEQPPICICGHIHEARGID 180
L+ + D++LTH PP+ LD TF+GV AG LR ++ +P + GHIHE+ GI+
Sbjct: 158 LESSGLTVDVLLTHHPPHGV-LDTTFAGVRAGLHDLRSLVDSLKPRAHLFGHIHESPGIE 216
Query: 181 EIGDTVIVNPGPLSRGYYAIV 201
IG TV VNPGP G YA+V
Sbjct: 217 SIGGTVFVNPGPAYEGRYALV 237
>gb|AAK42406.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 325
Score = 79.6 bits (193), Expect = 3e-14
Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 22/118 (18%)
Query: 95 VVGLGGSNVTPFSTIWEFSDDEIYSSLKK------NYKQGDIVLTHSPPYNTKLDRT--- 145
+V G N TP++T E +++IYS L K NY + I H+PPYNT LD
Sbjct: 181 IVSYGYVNPTPWNTFREKKEEDIYSDLSKIVSKINNYSKA-IYNFHAPPYNTNLDNAPLL 239
Query: 146 ------------FSGVHAGSKGLRMFLEEEQPPICICGHIHEARGIDEIGDTVIVNPG 191
H GSK +R +EE +P + + GHIHE+RG D+I +T+++NPG
Sbjct: 240 DENLKPIIRGGEIVYTHVGSKSIRKIIEETKPLLGLHGHIHESRGFDKINNTIVINPG 297
>gb|AAK42264.1| Hypothetical protein [Sulfolobus solfataricus]
Length = 316
Score = 78.8 bits (191), Expect = 5e-14
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 14/196 (7%)
Query: 9 IHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAE--QILEPLLRLNIRVLAIMGN 66
+ K VV +VIED++ + + + +++ +I E + RL +V +
Sbjct: 80 LRSGKYIVVDKKEVIEDIKSDKSKLEKIVIEKASEQMSRWVKIAEEIFRLE-KVFWSPAH 138
Query: 67 CDGRDVPRILERLGINVHNKRV-KVKETGVVGLG-GSNVTPFSTIWEFSDDEIYSSLKKN 124
D + IL+ G N+ N+ V ++E +V LG GS + ++ E D E+Y K
Sbjct: 139 GDIPQLDSILKNYGSNLINENVINLEEIQIVSLGFGSPIG--NSYREIPDSELYIKGKSL 196
Query: 125 YKQGD----IVLTHSPPYNTKLDRTFSGV---HAGSKGLRMFLEEEQPPICICGHIHEAR 177
K D I+ H PP NTKLD G+ H GSK + + E QP I + GH+HE+
Sbjct: 197 LKDADKERLIMNFHMPPLNTKLDNAKVGLRKSHVGSKAVLDLITEFQPIISLHGHVHEST 256
Query: 178 GIDEIGDTVIVNPGPL 193
+D++G+T+ +NPG L
Sbjct: 257 SMDKVGETIAINPGSL 272
>pir||S73080 hypothetical protein c0613 - Sulfolobus solfataricus
>gi|1707692|emb|CAA69496.1| (Y08256) orf c06013
[Sulfolobus solfataricus]
Length = 309
Score = 78.8 bits (191), Expect = 5e-14
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 14/196 (7%)
Query: 9 IHGNKGSVVALAKVIEDLRPELILIAGDITHFGDGKVAE--QILEPLLRLNIRVLAIMGN 66
+ K VV +VIED++ + + + +++ +I E + RL +V +
Sbjct: 73 LRSGKYIVVDKKEVIEDIKSDKSKLEKIVIEKASEQMSRWVKIAEEIFRLE-KVFWSPAH 131
Query: 67 CDGRDVPRILERLGINVHNKRV-KVKETGVVGLG-GSNVTPFSTIWEFSDDEIYSSLKKN 124
D + IL+ G N+ N+ V ++E +V LG GS + ++ E D E+Y K
Sbjct: 132 GDIPQLDSILKNYGSNLINENVINLEEIQIVSLGFGSPIG--NSYREIPDSELYIKGKSL 189
Query: 125 YKQGD----IVLTHSPPYNTKLDRTFSGV---HAGSKGLRMFLEEEQPPICICGHIHEAR 177
K D I+ H PP NTKLD G+ H GSK + + E QP I + GH+HE+
Sbjct: 190 LKDADKERLIMNFHMPPLNTKLDNAKVGLRKSHVGSKAVLDLITEFQPIISLHGHVHEST 249
Query: 178 GIDEIGDTVIVNPGPL 193
+D++G+T+ +NPG L
Sbjct: 250 SMDKVGETIAINPGSL 265
>gb|AAK42836.1| Hypothetical protein [Sulfolobus solfataricus]
Length = 324
Score = 78.0 bits (189), Expect = 8e-14
Identities = 57/164 (34%), Positives = 83/164 (49%), Gaps = 24/164 (14%)
Query: 51 EPLLRLNIRVLAIMGNCDGR---DVPRILERLGINVHNKRVKVKETGVVGLGGSNVTPFS 107
E L N+++ +GN D DV ER+ + + V + ++ G N TP++
Sbjct: 134 EKLKGTNLKIYTNLGNDDPLYMFDVITKSERM-VKCEGEIVNINGYEMITFGYVNPTPWN 192
Query: 108 TIWEFSDDEIYSSLKKNY-KQGDIVLT----HSPPYNTKLD------RTFSGV------- 149
T E ++D+IYS+LK+ K G+ T H+PPY T LD +T V
Sbjct: 193 TPREMTEDQIYSNLKRIIEKVGNPAKTIFNLHAPPYGTNLDNAPLLDKTLKPVVKNGEIV 252
Query: 150 --HAGSKGLRMFLEEEQPPICICGHIHEARGIDEIGDTVIVNPG 191
H GS +R EE QP + I GHIHE+R D+I T+I+NPG
Sbjct: 253 MTHVGSMSIRKLEEEFQPLLGIHGHIHESRAFDKINKTIIINPG 296
>gb|AAK42840.1| Hypothetical protein [Sulfolobus solfataricus]
Length = 302
Score = 69.1 bits (166), Expect = 4e-11
Identities = 41/112 (36%), Positives = 66/112 (58%), Gaps = 11/112 (9%)
Query: 101 SNVTPFSTIWEFSDDEIYSS----LKKNYKQGDIVLT-HSPPYNTKLDRTFSG---VHAG 152
+N TP+ + + IY+ LKK + +++ H+PPYNT+LD + +H G
Sbjct: 168 TNETPYKSYRVAPEYIIYNKGHEMLKKINETKNVIFNFHAPPYNTRLDNAYVNGQWIHVG 227
Query: 153 SKGLRMFLEEEQPPICICGHIHEARGIDEIGDTVIVNPGPL-SRGY--YAIV 201
S+ +R E+ QP + + GHIHE+ ID+IG T+++NPG + S G YAI+
Sbjct: 228 SRSVRELEEKFQPLLGLHGHIHESSAIDKIGKTLVINPGSMYSEGVLKYAII 279
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.141 0.417
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86447002
Number of Sequences: 2977
Number of extensions: 3693214
Number of successful extensions: 7620
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7588
Number of HSP's gapped (non-prelim): 16
length of query: 213
length of database: 189,106,746
effective HSP length: 52
effective length of query: 161
effective length of database: 157,985,422
effective search space: 25435652942
effective search space used: 25435652942
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 163 (67.9 bits)