BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1252 (PAB1252) DE:fragment pyrolysin related
(1204 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75015 probable pyrolysin (EC 3.4.-.-) homolog PAB1252 [sim... 2490 0.0
pir||H71456 probable pyrolysin (EC 3.4.-.-) homolog PH0310 [simi... 1717 0.0
gb|AAF40227.1| (AF239672) pyrolysin [Pyrococcus woesei] 178 2e-43
pir||T28159 pyrolysin (EC 3.4.-.-) [accepted] - Pyrococcus furio... 178 2e-43
pir||E71086 hypothetical protein PH0954 - Pyrococcus horikoshii ... 109 2e-22
>pir||C75015 probable pyrolysin (EC 3.4.-.-) homolog PAB1252 [similarity] -
Pyrococcus abyssi (strain Orsay)
>gi|5459075|emb|CAB50561.1| (AJ248288) fragment pyrolysin
related [Pyrococcus abyssi]
Length = 1204
Score = 2490 bits (6383), Expect = 0.0
Identities = 1204/1204 (100%), Positives = 1204/1204 (100%)
Query: 1 MASNFTIKENLYIQQFSILINDGIRGPSSSIIGGVSSMRIKRVISLIMLLMFVLSLVITP 60
MASNFTIKENLYIQQFSILINDGIRGPSSSIIGGVSSMRIKRVISLIMLLMFVLSLVITP
Sbjct: 1 MASNFTIKENLYIQQFSILINDGIRGPSSSIIGGVSSMRIKRVISLIMLLMFVLSLVITP 60
Query: 61 AMPVVAQPTKSVPLNPNDGMFPPRKTGLKWIPLEEYSKLTGNKYPVMDYKAFKEALEYAP 120
AMPVVAQPTKSVPLNPNDGMFPPRKTGLKWIPLEEYSKLTGNKYPVMDYKAFKEALEYAP
Sbjct: 61 AMPVVAQPTKSVPLNPNDGMFPPRKTGLKWIPLEEYSKLTGNKYPVMDYKAFKEALEYAP 120
Query: 121 FYLGRSQPLSSPEPNSLPSKVVNTEYLPPVGSQGYVGSCVGWSSTYYVWTYMINWWRSNP 180
FYLGRSQPLSSPEPNSLPSKVVNTEYLPPVGSQGYVGSCVGWSSTYYVWTYMINWWRSNP
Sbjct: 121 FYLGRSQPLSSPEPNSLPSKVVNTEYLPPVGSQGYVGSCVGWSSTYYVWTYMINWWRSNP 180
Query: 181 HPDSPDEIMNPTFTYNLINGGWDQGAFMWDAMNLISTIGAVPLTAFPLYVKGPYGDPENY 240
HPDSPDEIMNPTFTYNLINGGWDQGAFMWDAMNLISTIGAVPLTAFPLYVKGPYGDPENY
Sbjct: 181 HPDSPDEIMNPTFTYNLINGGWDQGAFMWDAMNLISTIGAVPLTAFPLYVKGPYGDPENY 240
Query: 241 AWVWPNLTQWMIAPHNSGNPEMYFWQLYDSPDSSLYNNPGDWYILYLDNETQWNYLKELL 300
AWVWPNLTQWMIAPHNSGNPEMYFWQLYDSPDSSLYNNPGDWYILYLDNETQWNYLKELL
Sbjct: 241 AWVWPNLTQWMIAPHNSGNPEMYFWQLYDSPDSSLYNNPGDWYILYLDNETQWNYLKELL 300
Query: 301 YKGYVIQTAILVLPSFDYLNHPEDIVGRLDRYIRLSKNYSDMYWTTGDYADWTVRVLLSW 360
YKGYVIQTAILVLPSFDYLNHPEDIVGRLDRYIRLSKNYSDMYWTTGDYADWTVRVLLSW
Sbjct: 301 YKGYVIQTAILVLPSFDYLNHPEDIVGRLDRYIRLSKNYSDMYWTTGDYADWTVRVLLSW 360
Query: 361 VQTAYSNINPGRNITPSIELMKDVLTKDFGVSLDDTIPEAVQKINATFYTRFVNNETWWE 420
VQTAYSNINPGRNITPSIELMKDVLTKDFGVSLDDTIPEAVQKINATFYTRFVNNETWWE
Sbjct: 361 VQTAYSNINPGRNITPSIELMKDVLTKDFGVSLDDTIPEAVQKINATFYTRFVNNETWWE 420
Query: 421 EASFYLSTYSLRGEEWFVNNAFVDIYALLNFMWMLYYIPEGTYVKSGRINYIDFLTFYQA 480
EASFYLSTYSLRGEEWFVNNAFVDIYALLNFMWMLYYIPEGTYVKSGRINYIDFLTFYQA
Sbjct: 421 EASFYLSTYSLRGEEWFVNNAFVDIYALLNFMWMLYYIPEGTYVKSGRINYIDFLTFYQA 480
Query: 481 WTGGHAVTIIGYDDNTTTPDGKGALIMVNSWGTDWGDNGFWKYSYKAARTYTYHDYRYGN 540
WTGGHAVTIIGYDDNTTTPDGKGALIMVNSWGTDWGDNGFWKYSYKAARTYTYHDYRYGN
Sbjct: 481 WTGGHAVTIIGYDDNTTTPDGKGALIMVNSWGTDWGDNGFWKYSYKAARTYTYHDYRYGN 540
Query: 541 PYVISVRDIISLPVFISYGEAFVYVPKAADYKPKLMTVVGIKHPYRGEVIDGVYNATNYE 600
PYVISVRDIISLPVFISYGEAFVYVPKAADYKPKLMTVVGIKHPYRGEVIDGVYNATNYE
Sbjct: 541 PYVISVRDIISLPVFISYGEAFVYVPKAADYKPKLMTVVGIKHPYRGEVIDGVYNATNYE 600
Query: 601 ILYWAGIPVGVAVNGSPVWEHSFLDFWMDYISDKELSIIKQNVNEIESILPQAHPFPDSP 660
ILYWAGIPVGVAVNGSPVWEHSFLDFWMDYISDKELSIIKQNVNEIESILPQAHPFPDSP
Sbjct: 601 ILYWAGIPVGVAVNGSPVWEHSFLDFWMDYISDKELSIIKQNVNEIESILPQAHPFPDSP 660
Query: 661 MAFDVSEAIDYIMWEILESNITPLTVDFYVAPKDILADNFTGVLYNFTVLLNINGELKVL 720
MAFDVSEAIDYIMWEILESNITPLTVDFYVAPKDILADNFTGVLYNFTVLLNINGELKVL
Sbjct: 661 MAFDVSEAIDYIMWEILESNITPLTVDFYVAPKDILADNFTGVLYNFTVLLNINGELKVL 720
Query: 721 GSLDKNVSIPDGSWTIVPLEIPVVSYDKAPNNVTIKYGDFNVSIYSIIPLEGAKVVIGGK 780
GSLDKNVSIPDGSWTIVPLEIPVVSYDKAPNNVTIKYGDFNVSIYSIIPLEGAKVVIGGK
Sbjct: 721 GSLDKNVSIPDGSWTIVPLEIPVVSYDKAPNNVTIKYGDFNVSIYSIIPLEGAKVVIGGK 780
Query: 781 EYPLKAEEGGYYYYGTEIAEKLELSAGTYNYTVVVTYPNGKEVALPSRIVTISGPTIKIV 840
EYPLKAEEGGYYYYGTEIAEKLELSAGTYNYTVVVTYPNGKEVALPSRIVTISGPTIKIV
Sbjct: 781 EYPLKAEEGGYYYYGTEIAEKLELSAGTYNYTVVVTYPNGKEVALPSRIVTISGPTIKIV 840
Query: 841 SPVDTVYNVTTIPIEVLVNHTLKITNVTAEVGGKSIELTYNATSGYYTGKVTLENGAYTL 900
SPVDTVYNVTTIPIEVLVNHTLKITNVTAEVGGKSIELTYNATSGYYTGKVTLENGAYTL
Sbjct: 841 SPVDTVYNVTTIPIEVLVNHTLKITNVTAEVGGKSIELTYNATSGYYTGKVTLENGAYTL 900
Query: 901 VVTATDELNNVGTARVHFVVSANAKVTPVTVENTTVTVGVTGNATITVTNDTVVANVTTS 960
VVTATDELNNVGTARVHFVVSANAKVTPVTVENTTVTVGVTGNATITVTNDTVVANVTTS
Sbjct: 901 VVTATDELNNVGTARVHFVVSANAKVTPVTVENTTVTVGVTGNATITVTNDTVVANVTTS 960
Query: 961 EGTYEVKVPVVNNAPAIFVNSTAIEDVVKGKANATLVAGWNVTVTTKTEVGKPEEIDGKL 1020
EGTYEVKVPVVNNAPAIFVNSTAIEDVVKGKANATLVAGWNVTVTTKTEVGKPEEIDGKL
Sbjct: 961 EGTYEVKVPVVNNAPAIFVNSTAIEDVVKGKANATLVAGWNVTVTTKTEVGKPEEIDGKL 1020
Query: 1021 HYPVTVKADVKLGQNGVAVIALRDINISKIYIIKNGQKIQLTTNESDTIGYYYIENGVIF 1080
HYPVTVKADVKLGQNGVAVIALRDINISKIYIIKNGQKIQLTTNESDTIGYYYIENGVIF
Sbjct: 1021 HYPVTVKADVKLGQNGVAVIALRDINISKIYIIKNGQKIQLTTNESDTIGYYYIENGVIF 1080
Query: 1081 VVVKQDPTIIAYGSYTKPAPVRISIPVLNFLGYSWYKLYSQKFEELYNEAIKLGIDNETL 1140
VVVKQDPTIIAYGSYTKPAPVRISIPVLNFLGYSWYKLYSQKFEELYNEAIKLGIDNETL
Sbjct: 1081 VVVKQDPTIIAYGSYTKPAPVRISIPVLNFLGYSWYKLYSQKFEELYNEAIKLGIDNETL 1140
Query: 1141 GLALKYHEKAAEYYSKVLELTGGNILYHLRDIRLFAPLRGAYVNEMKAVRILEKAIKELQ 1200
GLALKYHEKAAEYYSKVLELTGGNILYHLRDIRLFAPLRGAYVNEMKAVRILEKAIKELQ
Sbjct: 1141 GLALKYHEKAAEYYSKVLELTGGNILYHLRDIRLFAPLRGAYVNEMKAVRILEKAIKELQ 1200
Query: 1201 GEES 1204
GEES
Sbjct: 1201 GEES 1204
>pir||H71456 probable pyrolysin (EC 3.4.-.-) homolog PH0310 [similarity] -
Pyrococcus horikoshii >gi|3256700|dbj|BAA29383.1|
(AP000001) 1155aa long hypothetical pyrolysin [Pyrococcus
horikoshii]
Length = 1155
Score = 1717 bits (4397), Expect = 0.0
Identities = 816/1168 (69%), Positives = 963/1168 (81%), Gaps = 17/1168 (1%)
Query: 40 IKRVISLIMLLMFVLSLVITPAMPVVAQPTKSVPLNPN--DGMFPPRKTGLKWIPLEEYS 97
+K+++SL + L VLS+ MP+ +P + P + + D + P RKTGLKWIP EEY
Sbjct: 1 MKKLVSLAIALFLVLSV-----MPIF-KPASATPTSKSLADDLIPSRKTGLKWIPPEEYL 54
Query: 98 KLTGNKYPVMDYKAFKEALEYAPFYLGRSQPLSSPEP-NSLPSKVVNTEYLPPVGSQGYV 156
+LTG+ YPVMD +AF+EAL+YAPFYLGR+ PLS+ N LPS+V NTEYLPPVG+QG+V
Sbjct: 55 RLTGHIYPVMDERAFREALKYAPFYLGRTLPLSAGNSGNQLPSRVENTEYLPPVGNQGHV 114
Query: 157 GSCVGWSSTYYVWTYMINWWRSNPHPDSPDEIMNPTFTYNLINGGWDQGAFMWDAMNLIS 216
GSCVGWSSTYYVWTYM+NWWR+NPHP SP++IMNPTFTYNLINGG D+G+ MWDAMN+IS
Sbjct: 115 GSCVGWSSTYYVWTYMLNWWRNNPHPTSPEDIMNPTFTYNLINGGADEGSNMWDAMNVIS 174
Query: 217 TIGAVPLTAFPLYVKGPYGDPENYAWVWPNLTQWMIAPHNSGNPEMYFWQLYDSPDSSLY 276
TIGAVPL AFPLYV GP GDPENYAWVWPNLTQWM+AP+NSG +MY WQ +D + Y
Sbjct: 175 TIGAVPLNAFPLYVLGPRGDPENYAWVWPNLTQWMMAPYNSGTYDMYVWQYWDP--YNYY 232
Query: 277 NNPGDWYILYLDNETQWNYLKELLYKGYVIQTAILVLPSFDYLNHPEDIVGRLDRYIRLS 336
G WY+LYLDN TQWNYLK LL GYV+QTA+LVLPSF++LN PED + L+ Y+ S
Sbjct: 233 TPEGMWYLLYLDNGTQWNYLKGLLASGYVVQTALLVLPSFEFLNRPEDFINWLNFYVEYS 292
Query: 337 KNYSDMYWTTGDYADWTVRVLLSWVQTAYSNINPGRNITPSIELMKDVLTKDFGVSLDDT 396
K YSD+YWT+ Y WTV LL WV +AY N R+ + IELMK+VL DFGVSL DT
Sbjct: 293 KYYSDLYWTSDGYKYWTVEGLLDWVSSAY-NETFERDPSIYIELMKEVLVNDFGVSLTDT 351
Query: 397 IPEAVQKINATFYTRFVNNETWWEEASFYLSTYSLRGEEWFVNNAFVDIYALLNFMWMLY 456
IP AV+KINATFY RFVNN+TWW+EA FYLS YSL+GEEWFVNNAFVD+YAL NF WML+
Sbjct: 352 IPVAVEKINATFYERFVNNQTWWDEAKFYLSAYSLKGEEWFVNNAFVDLYALANFEWMLH 411
Query: 457 YIPEGTYVKSGRINYIDFLTFYQAWTGGHAVTIIGYDDNTTTPDGKGALIMVNSWGTDWG 516
YIPEGTYV SGRI Y++F +Y AW GGHAVTIIGYDDN TTPDG+GAL+MVNSWGTDWG
Sbjct: 412 YIPEGTYVSSGRIAYVNFNNYYWAWAGGHAVTIIGYDDNVTTPDGQGALLMVNSWGTDWG 471
Query: 517 DNGFWKYSYKAARTYTYHDYRYGNPYVISVRDIISLPVFISYGEAFVYVPKAADYKPKLM 576
DNGFWKYSY+AARTYT++DY PY+ISVR +I LP+FISY EAFVYVPKAA YKP+LM
Sbjct: 472 DNGFWKYSYEAARTYTWYDY----PYIISVRGLIQLPIFISYDEAFVYVPKAAKYKPRLM 527
Query: 577 TVVGIKHPYRGEVIDGVYNATNYEILYWAGIPVGVAVNGSPVWEHSFLDFWMDYISDKEL 636
TV+GI HPYRGEV+DG+YN+T YEI+ +GI GV VN + VW H++LDFW+DYISDKE
Sbjct: 528 TVIGINHPYRGEVVDGIYNSTTYEIIASSGILAGVKVNNTIVWFHNYLDFWIDYISDKEY 587
Query: 637 SIIKQNVNEIESILPQAHPFPDSPMAFDVSEAIDYIMWEILESNITPLTVDFYVAPKDIL 696
+ I N++ +ES LPQAHPFP+SPMAFDVS+ DY+++ + + N TP V FYV PKDIL
Sbjct: 588 NAILSNLSLLESYLPQAHPFPESPMAFDVSQLSDYLVYYMEDKNSTPTEVTFYVQPKDIL 647
Query: 697 ADNFTGVLYNFTVLLNINGELKVLGSLDKNVSIPDGSWTIVPLEIPVVSYDKAPNNVTIK 756
DNFTG LYNFT+L++I GE KVLGSL+ NVSIPDG + VPLEIPVVSYD APNNVT++
Sbjct: 648 PDNFTGELYNFTLLISIGGEYKVLGSLEGNVSIPDGGYVTVPLEIPVVSYDVAPNNVTVQ 707
Query: 757 YGDFNVSIYSIIPLEGAKVVIGGKEYPLKAEEGGYYYYGTEIAEKLELSAGTYNYTVVVT 816
YG+FNVSIYSIIPLE A++VIG + YPL AEEGGYY+Y IAEKL+L AGTYNYTV+VT
Sbjct: 708 YGNFNVSIYSIIPLEDARIVIGNESYPLTAEEGGYYFYANSIAEKLKLHAGTYNYTVIVT 767
Query: 817 YPNGKEVALPSRIVTISGPTIKIVSPVDTVYNVTTIPIEVLVNHTLKITNVTAEVGGKSI 876
YPNGKEVALP R VTIS PT+ I+SP +T+YN T IP++V V ++I NVTA+VG + +
Sbjct: 768 YPNGKEVALPERTVTISAPTVSIISPEETIYNETVIPVKVAVKDAVEIVNVTAKVGEEVL 827
Query: 877 ELTYNATSGYYTGKVTLENGAYTLVVTATDELNNVGTARVHFVVSANAKVTPVTVENTTV 936
ELTYN +SGYYTG + L +GAYTLVVTA D NN G A+VHF+V A A VT VTVEN TV
Sbjct: 828 ELTYNESSGYYTGTLNLSDGAYTLVVTAVDTWNNTGVAKVHFIVKAGANVTTVTVENATV 887
Query: 937 TVGVTGNATITVTNDTVVANVTTSEGTYEVKVPVVNNAPAIFVNSTAIEDVVKGKANATL 996
VGVTGN T+TV N TVVANVTTSEGTYEVKVPVVNN P+IFVNS+AIE V G+ANATL
Sbjct: 888 NVGVTGNVTVTVENKTVVANVTTSEGTYEVKVPVVNNVPSIFVNSSAIESVATGEANATL 947
Query: 997 VAGWNVTVTTKTEVGKPEEIDGKLHYPVTVKADVKLGQNGVAVIALRDINISKIYIIKNG 1056
VAGWN +V T VG+PE+ DGKL YPVT+ ADV+LG+NGVAVIALRD+NISKIY+IKNG
Sbjct: 948 VAGWNASVEATTSVGEPEKEDGKLLYPVTITADVELGENGVAVIALRDVNISKIYLIKNG 1007
Query: 1057 QKIQLTTNESDTIGYYYIENGVIFVVVKQDPTIIAYGSYTKPAPVR-ISIPVLNFLGYSW 1115
QKIQLTTNESD I YYY++NG++FVV+KQDP I+AYGSY KPAP R +SIP LNFLGYSW
Sbjct: 1008 QKIQLTTNESDPIAYYYVQNGIVFVVIKQDPKIVAYGSYAKPAPRRKVSIPTLNFLGYSW 1067
Query: 1116 YKLYSQKFEELYNEAIKLGIDNETLGLALKYHEKAAEYYSKVLELTGGNILYHLRDIRLF 1175
YKLYS+KF +LY EA++LG+DNETL LAL+YH+KA EYYSKVLEL+ GN++YHL DIRL
Sbjct: 1068 YKLYSEKFSKLYEEAVELGVDNETLALALEYHQKAGEYYSKVLELSEGNVIYHLYDIRLL 1127
Query: 1176 APLRGAYVNEMKAVRILEKAIKELQGEE 1203
APLR AYVNEMKAVRILEKAIKEL+GEE
Sbjct: 1128 APLRQAYVNEMKAVRILEKAIKELKGEE 1155
>gb|AAF40227.1| (AF239672) pyrolysin [Pyrococcus woesei]
Length = 1398
Score = 178 bits (448), Expect = 2e-43
Identities = 154/506 (30%), Positives = 242/506 (47%), Gaps = 54/506 (10%)
Query: 720 LGSLDKNV-SIPDGSWTIVPLEIP--VVSYDKAPNNVTIKYGDFNVSIY----SIIPLEG 772
LG+ + +V S+ DG + I +E+P N ++ D ++ +Y +++ L+G
Sbjct: 925 LGTYNASVESVGDGEFFIKGIEVPEGTAELKIRIGNPSVPNSDLDLYLYDSKGNLVALDG 984
Query: 773 -----AKVVIGGKEYPLKAEEGGYYYYGTEIA-EKLELSAGTYNYTVVVTYPNGKEVALP 826
+VV+ EYP K +G + E + T++ V +T NG
Sbjct: 985 NPTAEEEVVV---EYP-KPGVYSIVVHGYSVRDENGNPTTTTFDLVVQMTLDNGNIKLDK 1040
Query: 827 SRIVTISGPTIKIVSPVDTVYNVTTIPIEVLVNHTLKITNVTAEVGGKSIELTYNATSGY 886
I+ S ++ V T I + +H + + E+ + N +
Sbjct: 1041 DSIILGSNESV-----------VVTANITIDRDHPTGVYSGIIEIRDNEVYQDTNTSIAK 1089
Query: 887 YTGKVTLENGAYTLVVTATDELNNVGTARVHFVVSANAKVTPVTVENTTVTVG-----VT 941
+ ++ + + +T + + +G AR + ++ +A +T V N TV +G
Sbjct: 1090 IPITLVIDKADFAVGLTPAEGV--LGEARNYTLIVKHA-LTLEPVPNATVIIGNYTYLTD 1146
Query: 942 GNATITVTNDTVVANVTTSEGTYEVKVPVVNNAPAIFVNSTAIEDVVKGKANATLVAGWN 1001
N T+T T + + E T VK N F + + ++ + N +A +
Sbjct: 1147 ENGTVTFTY--APTKLGSDEITVIVKKENFNTLEKTFQITVSEPEITEEDINEPKLA-MS 1203
Query: 1002 VTVTTKTEVGKPEEIDGKLHYPVTVKADVKLGQNGVAVIALRDINISKIYIIKNGQKIQL 1061
T V E +G + VTV+ + N A I + + K + I++
Sbjct: 1204 SPEANATIVSVEMESEGGVKKTVTVEITINGTANETATIV--------VPVPKKAENIEV 1255
Query: 1062 TTNESDTIGYYYIENG----VIFVVVKQDPTIIAYGSYTKPAPVRISIPVLNFLGYSWYK 1117
+ D + Y IE G + + VK + +YT A R+SI LNFLGYSWY+
Sbjct: 1256 S---GDHVISYSIEEGEYAKYVIITVKFASPVTVTVTYTIYAGPRVSILTLNFLGYSWYR 1312
Query: 1118 LYSQKFEELYNEAIKLGIDNETLGLALKYHEKAAEYYSKVLELTGGNILYHLRDIRLFAP 1177
LYSQKF+ELY +A++LG+DNETL LAL YHEKA EYY K LEL+ GNI+ +L DIRL P
Sbjct: 1313 LYSQKFDELYQKALELGVDNETLALALSYHEKAKEYYEKALELSEGNIIQYLGDIRLLPP 1372
Query: 1178 LRGAYVNEMKAVRILEKAIKELQGEE 1203
LR AY+NEMKAV+ILEKAI+EL+GEE
Sbjct: 1373 LRQAYINEMKAVKILEKAIEELEGEE 1398
>pir||T28159 pyrolysin (EC 3.4.-.-) [accepted] - Pyrococcus furiosus
>gi|1556463|gb|AAB09761.1| (U55835) pyrolysin [Pyrococcus
furiosus]
Length = 1398
Score = 178 bits (448), Expect = 2e-43
Identities = 154/506 (30%), Positives = 242/506 (47%), Gaps = 54/506 (10%)
Query: 720 LGSLDKNV-SIPDGSWTIVPLEIP--VVSYDKAPNNVTIKYGDFNVSIY----SIIPLEG 772
LG+ + +V S+ DG + I +E+P N ++ D ++ +Y +++ L+G
Sbjct: 925 LGTYNASVESVGDGEFFIKGIEVPEGTAELKIRIGNPSVPNSDLDLYLYDSKGNLVALDG 984
Query: 773 -----AKVVIGGKEYPLKAEEGGYYYYGTEIA-EKLELSAGTYNYTVVVTYPNGKEVALP 826
+VV+ EYP K +G + E + T++ V +T NG
Sbjct: 985 NPTAEEEVVV---EYP-KPGVYSIVVHGYSVRDENGNPTTTTFDLVVQMTLDNGNIKLDK 1040
Query: 827 SRIVTISGPTIKIVSPVDTVYNVTTIPIEVLVNHTLKITNVTAEVGGKSIELTYNATSGY 886
I+ S ++ V T I + +H + + E+ + N +
Sbjct: 1041 DSIILGSNESV-----------VVTANITIDRDHPTGVYSGIIEIRDNEVYQDTNTSIAK 1089
Query: 887 YTGKVTLENGAYTLVVTATDELNNVGTARVHFVVSANAKVTPVTVENTTVTVG-----VT 941
+ ++ + + +T + + +G AR + ++ +A +T V N TV +G
Sbjct: 1090 IPITLVIDKADFAVGLTPAEGV--LGEARNYTLIVKHA-LTLEPVPNATVIIGNYTYLTD 1146
Query: 942 GNATITVTNDTVVANVTTSEGTYEVKVPVVNNAPAIFVNSTAIEDVVKGKANATLVAGWN 1001
N T+T T + + E T VK N F + + ++ + N +A +
Sbjct: 1147 ENGTVTFTY--APTKLGSDEITVIVKKENFNTLEKTFQITVSEPEITEEDINEPKLA-MS 1203
Query: 1002 VTVTTKTEVGKPEEIDGKLHYPVTVKADVKLGQNGVAVIALRDINISKIYIIKNGQKIQL 1061
T V E +G + VTV+ + N A I + + K + I++
Sbjct: 1204 SPEANATIVSVEMESEGGVKKTVTVEITINGTANETATIV--------VPVPKKAENIEV 1255
Query: 1062 TTNESDTIGYYYIENG----VIFVVVKQDPTIIAYGSYTKPAPVRISIPVLNFLGYSWYK 1117
+ D + Y IE G + + VK + +YT A R+SI LNFLGYSWY+
Sbjct: 1256 S---GDHVISYSIEEGEYAKYVIITVKFASPVTVTVTYTIYAGPRVSILTLNFLGYSWYR 1312
Query: 1118 LYSQKFEELYNEAIKLGIDNETLGLALKYHEKAAEYYSKVLELTGGNILYHLRDIRLFAP 1177
LYSQKF+ELY +A++LG+DNETL LAL YHEKA EYY K LEL+ GNI+ +L DIRL P
Sbjct: 1313 LYSQKFDELYQKALELGVDNETLALALSYHEKAKEYYEKALELSEGNIIQYLGDIRLLPP 1372
Query: 1178 LRGAYVNEMKAVRILEKAIKELQGEE 1203
LR AY+NEMKAV+ILEKAI+EL+GEE
Sbjct: 1373 LRQAYINEMKAVKILEKAIEELEGEE 1398
>pir||E71086 hypothetical protein PH0954 - Pyrococcus horikoshii
>gi|3257368|dbj|BAA30051.1| (AP000004) 4436aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 4436
Score = 109 bits (269), Expect = 2e-22
Identities = 107/395 (27%), Positives = 177/395 (44%), Gaps = 46/395 (11%)
Query: 807 GTYNYTVVVTYPNGKEVALPSRIVTISG---PTIKIVSPVDTVYNVTTIPIEVLVNHTLK 863
G NYT V T +EV L R + P ++I+ P + YN T I+V
Sbjct: 4076 GIMNYTRV-TLKLTQEVILSGRARKVEDKIPPLVEILFPRNMTYNETIREIKVRATDESG 4134
Query: 864 ITNVTAEVGGKSIELTYNATSGYYTGKVTLENGAYTLVVTATDELNNVGTARVHFVVSAN 923
I NVTA + G+S+ L + + G+V L++G Y L V A+D+ NVG + V+F ++ +
Sbjct: 4135 IANVTATINGESLSL--EKVNETWIGRVELDDGKYELNVFASDKWGNVGCSTVNFTINRS 4192
Query: 924 AKVTPVTVENTTVTVGVTGNATITV--TNDTVVANVTTSEGTYEVKVPVVNNAPAIFVNS 981
K V + N T V + G+ V D +V V S K+P
Sbjct: 4193 VK---VRIINGTEIVTIPGDIKTRVYFEGDIIVEIVKES---LRFKIP---------SGG 4237
Query: 982 TAIEDVVKGKANATLVAGWNVTVTTKTEVGKPEEIDGKLHYPVTVKADVKLGQNGVAVIA 1041
T + D +G+ + L+A N T+ ++ + E +GK + + + + G + V+
Sbjct: 4238 TLVID-ERGRKDPWLLARINSTIENISKTSRIFEENGKKVHEIRYRISISRGY-AILVVP 4295
Query: 1042 LRDINISKIYIIKNGQKIQLTTNESDTIGYYYIENGVIFVVVKQDPTIIAYGSYTKPAPV 1101
L + +S I IIKNG T + YY + G +F+ + +DP + S + +
Sbjct: 4296 LEGMKVSSIRIIKNG----TVTRDEKHGNYYKLSKGYLFIFLSEDPIVEVTLSKIEKKDI 4351
Query: 1102 RISIPVLNFLGYSWYKLYSQKFEELYNEAIKLGIDNETLGLALKYHEKAAEYYSKVLE-- 1159
VL + G W + Y + EE + + NET A++ HE+A +YY K E
Sbjct: 4352 ---FRVLYYAGIIWERNYLRLKEEFI-----MKMSNETSQEAIRLHEEAEKYYLKGREYY 4403
Query: 1160 --LTGGNILYHLRDIRLFAPLRGAYVNEMKAVRIL 1192
+ + +Y +R AY+ E KA+ +L
Sbjct: 4404 PRIPSPSAIYWYA-----VYMRKAYLTERKALELL 4433
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.137 0.416
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 502146433
Number of Sequences: 2977
Number of extensions: 24172889
Number of successful extensions: 59319
Number of sequences better than 1.0e-10: 5
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 59288
Number of HSP's gapped (non-prelim): 14
length of query: 1204
length of database: 189,106,746
effective HSP length: 57
effective length of query: 1147
effective length of database: 154,992,987
effective search space: 177776956089
effective search space used: 177776956089
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 170 (70.6 bits)