BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1257 (PAB1257) DE:Hypothetical protein
(1134 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75014 hypothetical protein PAB1257 - Pyrococcus abyssi (st... 2225 0.0
gb|AAK42417.1| Purine NTPase [Sulfolobus solfataricus] 78 7e-13
>pir||D75014 hypothetical protein PAB1257 - Pyrococcus abyssi (strain Orsay)
>gi|5459068|emb|CAB50554.1| (AJ248288) hypothetical
protein [Pyrococcus abyssi]
Length = 1134
Score = 2225 bits (5702), Expect = 0.0
Identities = 1134/1134 (100%), Positives = 1134/1134 (100%)
Query: 1 MNILAVQPNATVKTFPDVIIGVGGAGKLLIFSMLQKEWFIRELLKYTKESNERVTFVIVD 60
MNILAVQPNATVKTFPDVIIGVGGAGKLLIFSMLQKEWFIRELLKYTKESNERVTFVIVD
Sbjct: 1 MNILAVQPNATVKTFPDVIIGVGGAGKLLIFSMLQKEWFIRELLKYTKESNERVTFVIVD 60
Query: 61 TARAELSKDREALKEIEKKIDKIAKEMKVPKNVHIVLKCLIEDLHITNPYNLYDLDLLRK 120
TARAELSKDREALKEIEKKIDKIAKEMKVPKNVHIVLKCLIEDLHITNPYNLYDLDLLRK
Sbjct: 61 TARAELSKDREALKEIEKKIDKIAKEMKVPKNVHIVLKCLIEDLHITNPYNLYDLDLLRK 120
Query: 121 VKEGVARVWWLYDNEFGIDYTEGLKIYTSGFDFGTLRRRAVTKAMLYKAIAEGIVADIFQ 180
VKEGVARVWWLYDNEFGIDYTEGLKIYTSGFDFGTLRRRAVTKAMLYKAIAEGIVADIFQ
Sbjct: 121 VKEGVARVWWLYDNEFGIDYTEGLKIYTSGFDFGTLRRRAVTKAMLYKAIAEGIVADIFQ 180
Query: 181 LRGKVSNVAMIVGLGGGTGSGLFIDLAKYLKDSKRDANITLFGILPSLKEDEVAKANAFV 240
LRGKVSNVAMIVGLGGGTGSGLFIDLAKYLKDSKRDANITLFGILPSLKEDEVAKANAFV
Sbjct: 181 LRGKVSNVAMIVGLGGGTGSGLFIDLAKYLKDSKRDANITLFGILPSLKEDEVAKANAFV 240
Query: 241 AVSELEYLMLHGEHEERLFSNVVLATIAPTEVQTTPNAWGPGRPVEFEEIFPYIFLNIYI 300
AVSELEYLMLHGEHEERLFSNVVLATIAPTEVQTTPNAWGPGRPVEFEEIFPYIFLNIYI
Sbjct: 241 AVSELEYLMLHGEHEERLFSNVVLATIAPTEVQTTPNAWGPGRPVEFEEIFPYIFLNIYI 300
Query: 301 AGNKGDLRGTPYGSFVLATAGILTYDIQGILQNQELLNTALAYLKTRIHKEREIREQFDG 360
AGNKGDLRGTPYGSFVLATAGILTYDIQGILQNQELLNTALAYLKTRIHKEREIREQFDG
Sbjct: 301 AGNKGDLRGTPYGSFVLATAGILTYDIQGILQNQELLNTALAYLKTRIHKEREIREQFDG 360
Query: 361 FLSTLQSEGLIELKDEINIFKPYLEIARNRIAEFFKTFIDNRILRIFQYDTPIQLEKAIS 420
FLSTLQSEGLIELKDEINIFKPYLEIARNRIAEFFKTFIDNRILRIFQYDTPIQLEKAIS
Sbjct: 361 FLSTLQSEGLIELKDEINIFKPYLEIARNRIAEFFKTFIDNRILRIFQYDTPIQLEKAIS 420
Query: 421 KHVLTPRDQISTMNLNQLEEYLSSLEAAILKTEVTAPKNETDKELLELAKLELQNIRQMI 480
KHVLTPRDQISTMNLNQLEEYLSSLEAAILKTEVTAPKNETDKELLELAKLELQNIRQMI
Sbjct: 421 KHVLTPRDQISTMNLNQLEEYLSSLEAAILKTEVTAPKNETDKELLELAKLELQNIRQMI 480
Query: 481 YQIKKAHMVTLEPLGPELSQFTADFGGLIRDLVTLEVSPQSLKVLLTIKEYLDDLINKNE 540
YQIKKAHMVTLEPLGPELSQFTADFGGLIRDLVTLEVSPQSLKVLLTIKEYLDDLINKNE
Sbjct: 481 YQIKKAHMVTLEPLGPELSQFTADFGGLIRDLVTLEVSPQSLKVLLTIKEYLDDLINKNE 540
Query: 541 ASLRKLRREFDELQEIKRQYTSQVARLISEISPSLTEYYTIFDVFNRVLPVLKELNSKIE 600
ASLRKLRREFDELQEIKRQYTSQVARLISEISPSLTEYYTIFDVFNRVLPVLKELNSKIE
Sbjct: 541 ASLRKLRREFDELQEIKRQYTSQVARLISEISPSLTEYYTIFDVFNRVLPVLKELNSKIE 600
Query: 601 HFVQVSNDIIVAEEEDIAEGTPEAFESEINSIVEEIKQRAESIIRQVGDNPLFSEILKDL 660
HFVQVSNDIIVAEEEDIAEGTPEAFESEINSIVEEIKQRAESIIRQVGDNPLFSEILKDL
Sbjct: 601 HFVQVSNDIIVAEEEDIAEGTPEAFESEINSIVEEIKQRAESIIRQVGDNPLFSEILKDL 660
Query: 661 VREVEKISEIIIEIYNQKYWCYKSRHASFVEKITGKARVYKDECENAEDRISNLLNNLGF 720
VREVEKISEIIIEIYNQKYWCYKSRHASFVEKITGKARVYKDECENAEDRISNLLNNLGF
Sbjct: 661 VREVEKISEIIIEIYNQKYWCYKSRHASFVEKITGKARVYKDECENAEDRISNLLNNLGF 720
Query: 721 PQYIMLHSNMGIVEGVEAINIVSTIGEIVSKELSRIGTNIEVKTLDNIRLGDLDISLEDI 780
PQYIMLHSNMGIVEGVEAINIVSTIGEIVSKELSRIGTNIEVKTLDNIRLGDLDISLEDI
Sbjct: 721 PQYIMLHSNMGIVEGVEAINIVSTIGEIVSKELSRIGTNIEVKTLDNIRLGDLDISLEDI 780
Query: 781 AKKSRDYNEFLHSVEETILRELLAYKGISTREHELKSEIDKLSVNVQKLSQLKEKIARIE 840
AKKSRDYNEFLHSVEETILRELLAYKGISTREHELKSEIDKLSVNVQKLSQLKEKIARIE
Sbjct: 781 AKKSRDYNEFLHSVEETILRELLAYKGISTREHELKSEIDKLSVNVQKLSQLKEKIARIE 840
Query: 841 NNIRDIRDLIDEYSEIKRNMKSQFDKLDKALEEREQFSRKSETYKIIYDPDPTIVGVVQR 900
NNIRDIRDLIDEYSEIKRNMKSQFDKLDKALEEREQFSRKSETYKIIYDPDPTIVGVVQR
Sbjct: 841 NNIRDIRDLIDEYSEIKRNMKSQFDKLDKALEEREQFSRKSETYKIIYDPDPTIVGVVQR 900
Query: 901 MEGANLAKVFSELAGSNILQKEAEKLRNYLEELISRLTSPPYSGIIVPSKEVVEIKPPVR 960
MEGANLAKVFSELAGSNILQKEAEKLRNYLEELISRLTSPPYSGIIVPSKEVVEIKPPVR
Sbjct: 901 MEGANLAKVFSELAGSNILQKEAEKLRNYLEELISRLTSPPYSGIIVPSKEVVEIKPPVR 960
Query: 961 WEVNRVYTFINTVGVNSEVLREKIFNKNFQEELSRKLSRDLDISPMTGAGMPRVAVDYQD 1020
WEVNRVYTFINTVGVNSEVLREKIFNKNFQEELSRKLSRDLDISPMTGAGMPRVAVDYQD
Sbjct: 961 WEVNRVYTFINTVGVNSEVLREKIFNKNFQEELSRKLSRDLDISPMTGAGMPRVAVDYQD 1020
Query: 1021 ISGPWDIAVTLIFTGVFLEDIYGVFSRTSASIGSDPISYYASYLNKKKEGLNSEIFHHVY 1080
ISGPWDIAVTLIFTGVFLEDIYGVFSRTSASIGSDPISYYASYLNKKKEGLNSEIFHHVY
Sbjct: 1021 ISGPWDIAVTLIFTGVFLEDIYGVFSRTSASIGSDPISYYASYLNKKKEGLNSEIFHHVY 1080
Query: 1081 KLEDGWYIERKPIKIEDAILLAKETNIEKVREEMKEYVEKVSIIQEGREGGTEQ 1134
KLEDGWYIERKPIKIEDAILLAKETNIEKVREEMKEYVEKVSIIQEGREGGTEQ
Sbjct: 1081 KLEDGWYIERKPIKIEDAILLAKETNIEKVREEMKEYVEKVSIIQEGREGGTEQ 1134
>gb|AAK42417.1| Purine NTPase [Sulfolobus solfataricus]
Length = 864
Score = 77.6 bits (188), Expect = 7e-13
Identities = 110/608 (18%), Positives = 260/608 (42%), Gaps = 65/608 (10%)
Query: 426 PRDQISTMNLNQLEEYLSSLEAAILKTEVTAPKNETDKELLELAKLELQNIRQMIYQIKK 485
P + +T+ N++E+ L ++ I + + + E DK L +N ++++ +I K
Sbjct: 100 PIARSATVVSNEIEKILG-IDKDIALSTIIVRQGELDKIL--------ENFQEIMGKILK 150
Query: 486 AHMVT--LEPLGPELSQFTADFGGLIRDLVTLEVSPQSLKV-----------LLTIKEYL 532
++ ++ GP + +F + +R+L +E + K L KE L
Sbjct: 151 LELIEKLIDSRGP-IVEFRKNLENKLRELDRIEQDYNNFKKTVEEKRARVLELKKDKEKL 209
Query: 533 DDLINKNEASLRKLRREFDELQEIKRQYTSQVARLISEISPSLTEYYTIFDVFNRVLPVL 592
+D I E ++ ++ +FDE ++ + QY L + L E + + +
Sbjct: 210 EDEIKNLEKRIKDIKDQFDEYEKKRNQYLKLTTTLKIK-EGELNELNRSIEELRKQTENM 268
Query: 593 KELNSKIEHFVQVSNDIIVAEEEDIAEGTPEAFESEINSIVEEIKQRAESIIRQVGDNPL 652
+L +I + N + E+ ++ + + + ++ +EI++ ++I R+ P
Sbjct: 269 DQLEKEINELENLRNIKLKFEKYEVLAKSHTEMSANVINLEKEIEEYEKAIRRKEELEPK 328
Query: 653 FSEILKDLVREVEKISEIIIEIYNQKYWCYKSRHASFVEKITGKARVYKD--ECENAEDR 710
+ + K+L R++E++ KY Y + K+ K R+ KD E N D+
Sbjct: 329 YLKY-KELERKLEELQP--------KYQQYLKLKSDLDSKLNLKERLEKDASELSNDIDK 379
Query: 711 ISNLLNNLGFPQ--YIMLHSNMGIVEGV--EAINIVSTIGEIVSKELSRIGTNIEVKTLD 766
+++L + + + L + + VE + E I++ I ++ + G ++ +
Sbjct: 380 VNSLEQKVEETRKKQLNLRAQLAKVESLISEKNEIINNISQVEGETCPVCGRPLDEEHKQ 439
Query: 767 NI------RLGDLDISLEDIAKKSRDYNEFLHSVEETILR---ELLAYKGISTREHELKS 817
I + L+++ ++ ++ + L+ +E R +Y + + +L
Sbjct: 440 KIIKEAKSYILQLELNKNELEEELKKITNELNKIEREYRRLSNNKASYDNVMRQLKKLNE 499
Query: 818 EIDKLSVNVQKLSQLKEKIARIENNIRDIRDLIDEYSEIKRNMKSQFDKLDKALEEREQF 877
EI+ L ++ L + E+I +I +++++ +E+ + + K + DK L+E ++
Sbjct: 500 EIENLHSEIESLKNIDEEIKKINEEVKELKLYYEEFMRLSKYTKEELDKKRVKLDEMKK- 558
Query: 878 SRKSETYKIIYDPDPTIVGVVQRMEGANLAKVFSELAGSNILQKEAEKLRNYLEELISRL 937
+K E K + + + G+ ++ L +L + E +K + LE+ I +
Sbjct: 559 -KKEEIEKEMRGLESELKGLDRKA----LESKILDLENKRVKLDEMKKKKGILEDYIRQ- 612
Query: 938 TSPPYSGIIVPSKEVVEIKPPV---RWEVNRVYTFINTVGVNSEVLREKIFNKNFQEELS 994
+ + +EV ++ V +++ NR ++ + L+EK K+ E
Sbjct: 613 -------VKLLQEEVKNLREEVNIIQFDENRYNELKTSLDAYNLSLKEKENRKSRIEGEL 665
Query: 995 RKLSRDLD 1002
L +D++
Sbjct: 666 ESLEKDIE 673
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.137 0.376
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 395815570
Number of Sequences: 2977
Number of extensions: 17233084
Number of successful extensions: 89206
Number of sequences better than 1.0e-10: 2
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 89185
Number of HSP's gapped (non-prelim): 6
length of query: 1134
length of database: 189,106,746
effective HSP length: 63
effective length of query: 1071
effective length of database: 151,402,065
effective search space: 162151611615
effective search space used: 162151611615
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 170 (70.6 bits)