BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1284 (PAB1284) DE:Hypothetical protein
         (740 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||A75011 hypothetical protein PAB1284 - Pyrococcus abyssi (st...  1530  0.0
pir||A71141 hypothetical protein PH0340 - Pyrococcus horikoshii ...  1474  0.0
pir||E64449 hypothetical protein MJ1198 - Methanococcus jannasch...   750  0.0
pir||A69202 conserved hypothetical protein MTH763 - Methanobacte...   730  0.0
gi|11498935 conserved hypothetical protein [Archaeoglobus fulgid...   522  e-147
gb|AAG19248.1| (AE005020) Vng0779c [Halobacterium sp. NRC-1]          364  2e-99
gb|AAG19805.1| (AE005065) Vng1511c [Halobacterium sp. NRC-1]          226  6e-58

>pir||A75011 hypothetical protein PAB1284 - Pyrococcus abyssi (strain Orsay)
           >gi|5459041|emb|CAB50527.1| (AJ248288) hypothetical
           protein [Pyrococcus abyssi]
           Length = 740
           
 Score = 1530 bits (3917), Expect = 0.0
 Identities = 740/740 (100%), Positives = 740/740 (100%)

Query: 1   MAVKDCPECHGTGKVKVGEKECPVCHGWGYVPADFNLSEHLKGYRNLDNLGVDDEVDEIP 60
           MAVKDCPECHGTGKVKVGEKECPVCHGWGYVPADFNLSEHLKGYRNLDNLGVDDEVDEIP
Sbjct: 1   MAVKDCPECHGTGKVKVGEKECPVCHGWGYVPADFNLSEHLKGYRNLDNLGVDDEVDEIP 60

Query: 61  CPECHGKGVVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYV 120
           CPECHGKGVVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYV
Sbjct: 61  CPECHGKGVVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYV 120

Query: 121 LDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQ 180
           LDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQ
Sbjct: 121 LDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQ 180

Query: 181 VLDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVTG 240
           VLDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVTG
Sbjct: 181 VLDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVTG 240

Query: 241 GPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRIW 300
           GPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRIW
Sbjct: 241 GPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRIW 300

Query: 301 GPEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIIIR 360
           GPEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIIIR
Sbjct: 301 GPEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIIIR 360

Query: 361 HHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME 420
           HHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME
Sbjct: 361 HHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME 420

Query: 421 DHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEYV 480
           DHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEYV
Sbjct: 421 DHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEYV 480

Query: 481 DVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYLE 540
           DVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYLE
Sbjct: 481 DVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYLE 540

Query: 541 YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLVEAIYPEVK 600
           YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLVEAIYPEVK
Sbjct: 541 YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLVEAIYPEVK 600

Query: 601 AKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGIIHDHFKEKYGED 660
           AKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGIIHDHFKEKYGED
Sbjct: 601 AKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGIIHDHFKEKYGED 660

Query: 661 SPIITLAYGPDFAVVRASDGMARYNFDLNKIVKVLEEKLPDAGVEGGGHSYAGSIKFFEG 720
           SPIITLAYGPDFAVVRASDGMARYNFDLNKIVKVLEEKLPDAGVEGGGHSYAGSIKFFEG
Sbjct: 661 SPIITLAYGPDFAVVRASDGMARYNFDLNKIVKVLEEKLPDAGVEGGGHSYAGSIKFFEG 720

Query: 721 KRKEVLEAFAKEILKLKAGA 740
           KRKEVLEAFAKEILKLKAGA
Sbjct: 721 KRKEVLEAFAKEILKLKAGA 740


>pir||A71141 hypothetical protein PH0340 - Pyrococcus horikoshii
           >gi|3256731|dbj|BAA29414.1| (AP000002) 740aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 740
           
 Score = 1474 bits (3775), Expect = 0.0
 Identities = 698/739 (94%), Positives = 728/739 (98%)

Query: 1   MAVKDCPECHGTGKVKVGEKECPVCHGWGYVPADFNLSEHLKGYRNLDNLGVDDEVDEIP 60
           MAV+DCPECHGTGK+KVGEKECPVCHGWGYVPADF L EHLKGYRNL NLGV++EVDEIP
Sbjct: 1   MAVRDCPECHGTGKIKVGEKECPVCHGWGYVPADFKLGEHLKGYRNLKNLGVEEEVDEIP 60

Query: 61  CPECHGKGVVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYV 120
           CPECHGKG VPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYV
Sbjct: 61  CPECHGKGTVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYV 120

Query: 121 LDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQ 180
           LDNACDYEDVE+GKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPG+EIIVQ
Sbjct: 121 LDNACDYEDVEVGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGEEIIVQ 180

Query: 181 VLDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVTG 240
           VLDVRPDR+EIDFLEAPLTRYREVQVKKELP+TLIGDL+EELAGKTV+VRGKVTQVQVTG
Sbjct: 181 VLDVRPDRKEIDFLEAPLTRYREVQVKKELPVTLIGDLREELAGKTVKVRGKVTQVQVTG 240

Query: 241 GPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRIW 300
           GPTVFTLTDGTGITWAAAFEAPGVRAYPN+NIGDVVEVIGKVSFHAGRIQIEI+DMHRIW
Sbjct: 241 GPTVFTLTDGTGITWAAAFEAPGVRAYPNVNIGDVVEVIGKVSFHAGRIQIEIVDMHRIW 300

Query: 301 GPEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIIIR 360
           GPEALEVKKRIEEELDKKA+P+DVGFLVKSEVLE LKPKIMKAAFMIRRAIFEGRPII+R
Sbjct: 301 GPEALEVKKRIEEELDKKAQPKDVGFLVKSEVLEALKPKIMKAAFMIRRAIFEGRPIILR 360

Query: 361 HHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME 420
           HHADTDGYTAGVALETAIVPLIE+VAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME
Sbjct: 361 HHADTDGYTAGVALETAIVPLIEEVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME 420

Query: 421 DHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEYV 480
           DH RFGDELPL+VIVDNGGT+EDIPAYKRLKAYGVKIVVIDHHDPR+WISEDKAKVDEYV
Sbjct: 421 DHMRFGDELPLVVIVDNGGTTEDIPAYKRLKAYGVKIVVIDHHDPRDWISEDKAKVDEYV 480

Query: 481 DVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYLE 540
           DVHVNPHHVKRGYYELTAGMLATEVAR++NP VEDKIKHLPAIAGTGDRSKAPEFYQYLE
Sbjct: 481 DVHVNPHHVKRGYYELTAGMLATEVARYVNPAVEDKIKHLPAIAGTGDRSKAPEFYQYLE 540

Query: 541 YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLVEAIYPEVK 600
           YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIE+ILLVTGNLQRHRMLV++IY EVK
Sbjct: 541 YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEDILLVTGNLQRHRMLVDSIYSEVK 600

Query: 601 AKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGIIHDHFKEKYGED 660
            KQE+VLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSG+IHDHFKEKYGE+
Sbjct: 601 EKQEKVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGLIHDHFKEKYGEE 660

Query: 661 SPIITLAYGPDFAVVRASDGMARYNFDLNKIVKVLEEKLPDAGVEGGGHSYAGSIKFFEG 720
           SPI+TLAYGPDFAVVRASDGMA+YNFDLNKIVK+L EKLPDAGVEGGGHSYAGSIKFFEG
Sbjct: 661 SPILTLAYGPDFAVVRASDGMAKYNFDLNKIVKILAEKLPDAGVEGGGHSYAGSIKFFEG 720

Query: 721 KRKEVLEAFAKEILKLKAG 739
           KRKEVLEAFAKEI KLKAG
Sbjct: 721 KRKEVLEAFAKEIFKLKAG 739


>pir||E64449 hypothetical protein MJ1198 - Methanococcus jannaschii
           >gi|1591827|gb|AAB99202.1| (U67561) conserved
           hypothetical protein [Methanococcus jannaschii]
           Length = 761
           
 Score =  750 bits (1915), Expect = 0.0
 Identities = 382/764 (50%), Positives = 525/764 (68%), Gaps = 34/764 (4%)

Query: 1   MAVKDCPECHGTGKVKVGEKECPVCHGWGYVPADFNLSEHLKGYRNLDNLGVDDEVDEIP 60
           M VK CP C GTGK  V  K CPVC G G++  +F+  +H+K  R       D +  EIP
Sbjct: 1   MIVK-CPICDGTGKKVVKYKTCPVCEGTGFID-EFSPKQHMK--RVSKRATYDLDYGEIP 56

Query: 61  CPECHGKGVVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPEC-----ERK- 114
           CP+C G G VPVY  C  CGG+GKV+ CD CG I G + P  +   +C +C     ERK 
Sbjct: 57  CPKCKGTGKVPVYAKCDFCGGSGKVVKCDRCGAIIGKY-PDFKDRTLCDKCLKEEEERKK 115

Query: 115 -FKVVYVLDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKR--QY 171
             + VYV D    + DVE GK+YKG++ R+E++G F+ LN+ V GL++ +D++  R    
Sbjct: 116 GLRNVYVFDELATFYDVEPGKFYKGVVTRIEKYGAFINLNEQVRGLLRPRDMISLRLENL 175

Query: 172 IPGDEIIVQVLDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKE---ELAGKTVR 228
             GDEIIVQ +DVRP++REIDF   PLT Y  V+ +KE+P++ I D+ +   E+  + V 
Sbjct: 176 NVGDEIIVQAIDVRPEKREIDFKYIPLTTYDLVKYEKEVPLSQIKDISQNLVEMRDQVVH 235

Query: 229 VRGKVTQVQVTGGPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGR 288
           +RG+V Q+  T GPTVFT+TDGT   W AA E  G+RA+P++ +GD+V+VIG+V+   GR
Sbjct: 236 IRGEVVQIVQTPGPTVFTITDGTDFAWVAALEIAGLRAHPDVKVGDIVDVIGRVTIRDGR 295

Query: 289 IQIEIIDMHRIWGPEALEVKKRIEEELDKKAKP-EDVGFLVKSEVLEKLKPKIMKAAFMI 347
           +QIE I + ++ G EA E++K+IEEE+D++A+P +D+ FLVKSEVLE+L+PK+   A  I
Sbjct: 296 LQIERIKLQKLEGDEAEEIRKKIEEEIDRRAEPAKDIPFLVKSEVLERLRPKMADVAKRI 355

Query: 348 RRAIFEGRPIIIRHHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYE 407
           R+A+ +GRPIIIRHHADTDGY  G+ALE AI+P+I++ A D DA WH FKRRPS+APFYE
Sbjct: 356 RKAVLDGRPIIIRHHADTDGYCGGIALEKAILPIIDKFAIDVDAIWHFFKRRPSKAPFYE 415

Query: 408 LEDVLKDIIFMMEDHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPRE 467
           LEDV KD++F +ED  +FG +LPLIV++DNG T EDIPA  + KAYG++++VIDHH P E
Sbjct: 416 LEDVTKDLVFSIEDALKFGQKLPLIVLIDNGSTDEDIPAISKAKAYGIEVIVIDHHFPGE 475

Query: 468 WISEDKAKVDEYVDVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTG 527
            + + K +VD+YVD HVNP+ V  G   LTAG+L TE+AR INP+VED+IKH+P IA  G
Sbjct: 476 -VVDGKVEVDDYVDAHVNPYLV-GGDSNLTAGVLGTEIARMINPDVEDEIKHIPGIAVVG 533

Query: 528 DRSKAPEFYQYL------------EYAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGII 575
           D +K  E  QY+            +Y K +    E L+KIA  +D EAFY +FMDG+GI+
Sbjct: 534 DHAKGEEAEQYVKIALDRLNELSKKYGKGRTYDREYLEKIALCMDFEAFYLRFMDGKGIV 593

Query: 576 EEILLVT-GNLQRHRMLVEAIYPEVKAKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYA 634
           ++IL        RH  L++ +Y +     ER ++AV+P +K+  L NGI  NT+DVE YA
Sbjct: 594 DDILATNIKEFGRHEELIDILYEQAMKMVERQMKAVIPALKTEFLENGIILNTLDVEKYA 653

Query: 635 PKFDYPSPGKLSGIIHDHFKEKYGEDSPIITLAYGPDFAVVRASDGM-ARYNFDLNKIVK 693
            KF +P+PGK +G  HD+  +KYGED PIITL+YGPDF VVRA+D +  +YNF+LN IV+
Sbjct: 654 HKFTFPAPGKTTGFAHDYIVQKYGEDKPIITLSYGPDFGVVRATDAVHEKYNFNLNLIVE 713

Query: 694 VLEEKLPDAGVEGGGHSYAGSIKFFEGKRKEVLEAFAKEILKLK 737
            L E++P+A ++GGGH  AGS+KF EG R +V+  F + I  +K
Sbjct: 714 QLMEEIPEASLDGGGHECAGSLKFVEGLRDKVIGRFIEIIKNMK 757


>pir||A69202 conserved hypothetical protein MTH763 - Methanobacterium
           thermoautotrophicum (strain Delta H)
           >gi|2621853|gb|AAB85266.1| (AE000855) conserved protein
           [Methanobacterium thermoautotrophicum]
           Length = 729
           
 Score =  730 bits (1865), Expect = 0.0
 Identities = 362/739 (48%), Positives = 513/739 (68%), Gaps = 20/739 (2%)

Query: 3   VKDCPECHGTGKVKVGEKECPVCHGWGYVPADFNLSEHLKGYRNLDNLGVD-DEVDEIPC 61
           ++ C EC G G      K C  CHG G+   + ++ +H KG  N      D ++  E+PC
Sbjct: 6   IQSCNECKGKGYRVKSYKICSACHGTGFRSTE-DIKDHFKGVSNSARQRFDLEDSHEVPC 64

Query: 62  PECHGKGVVPVYDTCPTCGGTGKVLVCDICGRI-KGPWEPGMETTWVCPECERKFKVVYV 120
             C GKG V V +TCPTCGG G+V +C  CGR+ KG  E        CPEC++K KV Y+
Sbjct: 65  EVCRGKGEVEVRETCPTCGGKGEVNICPSCGRMMKGRDE-------YCPECQKKEKV-YI 116

Query: 121 LDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQ 180
           L  AC  +D+E+G  Y+G I RVE++GVFV LN HV GL++         Y  GDE+ V+
Sbjct: 117 LHPACTMDDLEVGSIYRGKITRVEKYGVFVSLNSHVWGLMRGLF----PDYKVGDELFVR 172

Query: 181 VLDVRPDRREIDFLEAPLTR-YREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVT 239
           V  V+P + E+D + A +   Y  +++KK+LP T I D+  +  GKTVR+ G+V Q+Q T
Sbjct: 173 VSQVKPYKGEVDMIPASIKGPYEVIKLKKDLPRTRIADIDTKSLGKTVRIVGEVIQIQQT 232

Query: 240 GGPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRI 299
            GPT+FT++D TG TWAAAF+ PG+R YP+I IG +VEVIG+V+ H G+IQIE   + R+
Sbjct: 233 SGPTIFTVSDETGTTWAAAFDEPGIRVYPHIQIGHIVEVIGEVNQHTGKIQIESESIERL 292

Query: 300 WGPEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIII 359
            G EA E ++ I+E +D++A+PE    L++SE LEKL+PK+++AA  IRRA+++GR I++
Sbjct: 293 IGNEAAEARRLIDEAIDRRAEPERKDLLIESETLEKLRPKLVEAAKAIRRAVYDGRSILV 352

Query: 360 RHHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMM 419
           RHHAD DG  AGVA+E A++PL+  + P  DA WH FKR PS+APFYELEDV+KD+ + +
Sbjct: 353 RHHADADGICAGVAIEKAVLPLLRDLNPSTDAEWHYFKRAPSKAPFYELEDVVKDLSYAL 412

Query: 420 EDHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEY 479
           ED +R G +LPL+V++DNG T EDI A  + K Y ++IVV+DHH P E + + + +VDEY
Sbjct: 413 EDLERHGQKLPLLVLLDNGSTEEDILALMKAKIYDIEIVVVDHHYPGE-VQDGRVEVDEY 471

Query: 480 VDVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYL 539
           VD HVNP+ V  G  ++TAG L+ E+A+ INPE+ ++I HLP IA  GD + +PE   Y+
Sbjct: 472 VDTHVNPYLV-GGDSQITAGSLSVEIAKMINPEIAERILHLPGIAAVGDHANSPEAEAYI 530

Query: 540 EYAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLVEAIYPEV 599
           E A E+G   EDL++IA  ID EAFY +FM+GRGII+ IL + G+L +H+ LV+A+Y E 
Sbjct: 531 ELAAERGYEREDLERIAACIDFEAFYLRFMNGRGIIDTILGL-GSLDKHKKLVDALYREY 589

Query: 600 KAKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGIIHDHFKEKYGE 659
           + K +  LRA +P++KS  LPNGI FN +DVE Y+ +F +P+PGK  G +HD+  +K+GE
Sbjct: 590 ERKVDTQLRAAIPNLKSTRLPNGILFNVLDVEKYSHRFTFPAPGKTCGFVHDYMVQKHGE 649

Query: 660 DSPIITLAYGPDFAVVRASDGM-ARYNFDLNKIVKVLEEKLPDAGVEGGGHSYAGSIKFF 718
           D+PIITLAYGPDF V+RA+D +  ++ F+LN+IV  L E++P+A ++GGGH  AGS+K+ 
Sbjct: 650 DTPIITLAYGPDFGVIRATDAVNEKFGFNLNEIVWELAEEIPEAVIDGGGHECAGSLKYI 709

Query: 719 EGKRKEVLEAFAKEILKLK 737
           EG  K+VL AFA+++  LK
Sbjct: 710 EGLSKKVLSAFAEKVAALK 728


>gi|11498935 conserved hypothetical protein [Archaeoglobus fulgidus]
           >gi|7450090|pir||H69416 conserved hypothetical protein
           AF1337 - Archaeoglobus fulgidus
           >gi|2649241|gb|AAB89907.1| (AE001011) conserved
           hypothetical protein [Archaeoglobus fulgidus]
           Length = 692
           
 Score =  522 bits (1331), Expect = e-147
 Identities = 310/736 (42%), Positives = 435/736 (58%), Gaps = 50/736 (6%)

Query: 6   CPECHGTGKVKVGEKECPVCHGWGYVPA-DFNLSEHLKGYRNLDNLGVDDEVDEIP---C 61
           C  C G G +++ EKEC +C G G   + D  ++  L           D+++       C
Sbjct: 3   CNACGGKGYIEI-EKECEICGGTGKAKSFDPKITAELS----------DEQIKMFMSGVC 51

Query: 62  PECHGKGVVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYVL 121
             C G G V + D C  C GTGK   C ICG      E  +    +C  C R+    Y L
Sbjct: 52  GVCRGTGKVKIMDVCRECNGTGKAGRCKICG------EKVVGNHDLCSRCRRQ-PHAYRL 104

Query: 122 DNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQV 181
            N+C  EDV I + Y G +  V   GVFV LNK + GLI +++L G  ++   +EI+VQV
Sbjct: 105 RNSCGIEDVRINRVYVGTVSAVTDIGVFVNLNKRLRGLIHRRNL-GNNRFSEDEEILVQV 163

Query: 182 LDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVTGG 241
             +     EID     +  Y+ V++ KE+    I +L E   GK V VRG VT ++VTGG
Sbjct: 164 SGIGLSG-EIDLKPVKMDGYKVVEISKEVGRVEIAEL-ENYIGKMVEVRGLVTHIKVTGG 221

Query: 242 PTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRIWG 301
           PT+FTL DG     AAAFE  G RAYP + + DVV VIG V     ++QIEI++M ++ G
Sbjct: 222 PTIFTLLDGRASVQAAAFEG-GERAYPEVRVDDVVRVIGIVKRRENKLQIEILEMEKLLG 280

Query: 302 PEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIIIRH 361
            EA EV+KR+E E+++  +P+  GFL++SEVLE LK  ++K A  +++AI+E RP+IIRH
Sbjct: 281 EEAYEVRKRVEAEIERACEPDFRGFLIESEVLEALKEDMLKVAKELKKAIYESRPVIIRH 340

Query: 362 HADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMMED 421
           H D DG   GVALE A+  L+E+V  D +A+++L KRR SRAPFYELEDV++D+   +ED
Sbjct: 341 HWDADGTCGGVALEKALTDLVERVHSDSEAKYYLVKRRVSRAPFYELEDVVRDLDESLED 400

Query: 422 HQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEYVD 481
            +R GD++PL+V+VDNG   ED+PA ++   +G  ++ IDHH P E       +VD Y+ 
Sbjct: 401 AERHGDKIPLVVLVDNGSGLEDVPAIRQFLLFGADVITIDHHFPDE-------EVDSYLL 453

Query: 482 VHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYLEY 541
            HVNP+ V  G    T+G+L  E+AR I+   +  +KHL AI+  GDR++  E  +Y+E 
Sbjct: 454 YHVNPYKV-GGDSNYTSGVLCVEIARMIS---DLDMKHLAAISVVGDRAEG-EVERYIEL 508

Query: 542 AKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLVEAIYPEVKA 601
           +   G + E+L  IA  +++E FY +F     I+ EI L  G   RH  LV  +    K 
Sbjct: 509 S---GKSREELADIALAVEYEGFYLRFRTASQIMHEI-LGFGRQDRHVKLVRMLSEYAKE 564

Query: 602 KQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGIIHDHFKEKYGEDS 661
             E  ++  +  VK  +LPNGI    +DVE YA KF +P PGKL+G +HD  K+KY    
Sbjct: 565 AIEEQVKTAMEGVKVQILPNGIALAALDVENYAKKFTFPPPGKLTGEVHDRLKQKY---E 621

Query: 662 PIITLAYGPDFAVVRASDGMARYNFDLNKIVKVLEEKLPDAGVEGGGHSYAGSIKFFEGK 721
            I+T+ YGPDFAV+R S+G+     D+ +IVK L E++  AGV+GGGH   GSIKF + K
Sbjct: 622 RIVTIGYGPDFAVIR-SEGV---ELDIPRIVKELREEIV-AGVDGGGHLVVGSIKFVQAK 676

Query: 722 RKEVLEAFAKEILKLK 737
           RKEVL   A +I  LK
Sbjct: 677 RKEVLARLAAKIGNLK 692


>gb|AAG19248.1| (AE005020) Vng0779c [Halobacterium sp. NRC-1]
           Length = 604
           
 Score =  364 bits (924), Expect = 2e-99
 Identities = 206/527 (39%), Positives = 296/527 (56%), Gaps = 15/527 (2%)

Query: 121 LDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQ 180
           LD +C  ++VE G+YY   ++ V  +G FV L++HV GLI +    G       D++IV 
Sbjct: 18  LDASCTTQEVEAGEYYHATVNGVVEYGAFVDLSEHVSGLIHESTYSGDPDLAVDDDVIVH 77

Query: 181 VLDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVTG 240
           +  VR D  ++ F       YR  Q       T   D      G TV + G+V Q++ T 
Sbjct: 78  LSAVR-DNGDLSFEFVDPEEYRTEQRSHAYERTT-ADAVGSRIGDTVHIEGEVVQIKQTA 135

Query: 241 GPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRIW 300
           GPTVF + D T      AFE  GVRA+P + +GD+V V G      G  Q+E+     + 
Sbjct: 136 GPTVFRVRDETSAIPCTAFEDAGVRAHPGVEVGDIVHVSGDADDREGTTQLEVDAFEVLS 195

Query: 301 GPEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIIIR 360
           G ++ +V +R++  L ++A P DV  LV    LE+L P +   A  +RRA+ EGRPI +R
Sbjct: 196 GGDSADVARRLDAALAEQADPVDVDALVDWPALEQLLPDLRSVARTLRRAVLEGRPIRMR 255

Query: 361 HHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME 420
           HHAD DG  A + ++ A+   IE    D DA  HL KR PS+AP+YE+ED  +D+ F +E
Sbjct: 256 HHADGDGMCASLPVQYALRQFIEDTHQDEDAARHLLKRLPSKAPYYEMEDATRDLNFALE 315

Query: 421 DHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEYV 480
           D  R G +LPL++++DNG T ED PAYK L  Y + IVV+DHH P      D   VD  V
Sbjct: 316 DRARHGQKLPLLLMLDNGSTEEDTPAYKTLDNYDIPIVVVDHHHP------DPGAVDPLV 369

Query: 481 DVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYLE 540
           D HVNP ++    Y +T GML  E+AR I P +   ++H+PA+AG  DRSKA     YL+
Sbjct: 370 DEHVNP-YLHGEDYRITTGMLCVELARMIYPGITSDLEHVPAVAGLSDRSKADAMTDYLD 428

Query: 541 YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLV---EAIYP 597
            A++ G  E  L++++E +D+EA+  ++  G  +I +IL V G+ QRHR LV   + +  
Sbjct: 429 LARDAGYDESFLQQMSEALDYEAYMLRYDHGTQVIADILNVDGDAQRHRELVPFLDRLAS 488

Query: 598 EVKAKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGK 644
           E  A+Q   L A   HV+   + +G     IDVE +A +F YP  G+
Sbjct: 489 EAVAEQ---LDATRSHVEHERVASGANLYRIDVENHAHRFTYPRAGE 532


>gb|AAG19805.1| (AE005065) Vng1511c [Halobacterium sp. NRC-1]
           Length = 684
           
 Score =  226 bits (571), Expect = 6e-58
 Identities = 162/519 (31%), Positives = 247/519 (47%), Gaps = 35/519 (6%)

Query: 217 DLKEELAGKTVRVRGKVTQVQVTGGPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVV 276
           D  ++     V V G++T  + T GPTVF LTD TG   AAAF   GVRAYP I  G VV
Sbjct: 194 DALDDHVDDAVTVEGEITAARQTSGPTVFELTDETGAVDAAAFVEAGVRAYPEIEPGAVV 253

Query: 277 EVIGKVSFHAGRIQIEIIDMHRIWGPEALEVKKRIEEELDKKAKPEDVGFLVKSE-VLEK 335
           ++ G V    G +Q+E   +  + G  A EV+ R++  LD +A P     L   +  +  
Sbjct: 254 QLTGTVERRRGDLQVETEAVTELTGDRADEVRNRMDAALDDRAAPATTALLAPDDDAVAA 313

Query: 336 LKPKIMKAAFMIRRAIFEGRPIIIRHHADTDGYTAGVALETAIVPLIEQVAPDPDARWHL 395
           +   I+ AA  +RRA+ + RP+I+RH    +GY AG A+E A++PLI       DA +H 
Sbjct: 314 VHDDIVDAATAVRRAVIDARPVIVRHPTTVEGYVAGTAIERALLPLIRDEHAREDAEYHY 373

Query: 396 FKRRPSRAPFYELEDVLKDIIFMMEDHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGV 455
             RRP    FY ++D   D+  M+E   R  ++ PL V V  G T+E   A   L  Y  
Sbjct: 374 VDRRPLDDAFYTIDDATGDVTSMLEAAHRHDEKHPLFVFVGTGSTTESTDALDLLDIYDA 433

Query: 456 KIVVIDHHDPREWISEDKAKVDEYVDVHVNPHHVKRGYYELTAGMLATEVARFINPEVED 515
             VV+D        ++D A     +DV V+P     G   +  G L  ++A  IN +V +
Sbjct: 434 DTVVVD-----GGYADDAAG----MDVLVSP--TAAGEQPVNTGALGAQLAAVINDDVRE 482

Query: 516 KIKHLPAIAGTGDRSKAPEFYQYLEYAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGII 575
            + HLPA+A   D   A     Y + A +     +  + + + +  EAFY  + D R +I
Sbjct: 483 DLAHLPAVAYWTDLPAA-----YADLAADASYDSDAREALRDAVALEAFYQSYEDKRELI 537

Query: 576 EEILLVTGNLQRHRMLVEAIYPEVKAKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAP 635
            ++L    +      L + I  + + +    L    PH+ S    +G+ F T+DV  Y  
Sbjct: 538 ADLLWGDADDD----LADHIATQFRDRLATELSTAEPHL-STRHHDGVAFETLDVGAYTH 592

Query: 636 KFDYPSPGKLSGIIHDHFKEKYGEDSPIITLAYGPDFAVVRASDGMARYNFDLNKIVKVL 695
           ++D+P    L   +H         DS  + L  G D   VR+ D +     D++ +V  +
Sbjct: 593 QYDFPPVDLLLDALHRR------ADSTDVLLGAGEDALRVRSDDAV-----DVHAVVDAI 641

Query: 696 EEKL-PDAGVEGGGHSYAGSIKFFEGKRKEVLEAFAKEI 733
           ++ L   AGV   G +  G I+F  G+R  VL+A    I
Sbjct: 642 DDDLTTTAGVTARG-ARDGRIEFLAGERDAVLDAVVDAI 679


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.320    0.142    0.429 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 303169103
Number of Sequences: 2977
Number of extensions: 14283196
Number of successful extensions: 34894
Number of sequences better than 1.0e-10: 7
Number of HSP's better than  0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34813
Number of HSP's gapped (non-prelim): 9
length of query: 740
length of database: 189,106,746
effective HSP length: 54
effective length of query: 686
effective length of database: 156,788,448
effective search space: 107556875328
effective search space used: 107556875328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 169 (70.2 bits)