BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1284 (PAB1284) DE:Hypothetical protein
(740 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75011 hypothetical protein PAB1284 - Pyrococcus abyssi (st... 1530 0.0
pir||A71141 hypothetical protein PH0340 - Pyrococcus horikoshii ... 1474 0.0
pir||E64449 hypothetical protein MJ1198 - Methanococcus jannasch... 750 0.0
pir||A69202 conserved hypothetical protein MTH763 - Methanobacte... 730 0.0
gi|11498935 conserved hypothetical protein [Archaeoglobus fulgid... 522 e-147
gb|AAG19248.1| (AE005020) Vng0779c [Halobacterium sp. NRC-1] 364 2e-99
gb|AAG19805.1| (AE005065) Vng1511c [Halobacterium sp. NRC-1] 226 6e-58
>pir||A75011 hypothetical protein PAB1284 - Pyrococcus abyssi (strain Orsay)
>gi|5459041|emb|CAB50527.1| (AJ248288) hypothetical
protein [Pyrococcus abyssi]
Length = 740
Score = 1530 bits (3917), Expect = 0.0
Identities = 740/740 (100%), Positives = 740/740 (100%)
Query: 1 MAVKDCPECHGTGKVKVGEKECPVCHGWGYVPADFNLSEHLKGYRNLDNLGVDDEVDEIP 60
MAVKDCPECHGTGKVKVGEKECPVCHGWGYVPADFNLSEHLKGYRNLDNLGVDDEVDEIP
Sbjct: 1 MAVKDCPECHGTGKVKVGEKECPVCHGWGYVPADFNLSEHLKGYRNLDNLGVDDEVDEIP 60
Query: 61 CPECHGKGVVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYV 120
CPECHGKGVVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYV
Sbjct: 61 CPECHGKGVVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYV 120
Query: 121 LDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQ 180
LDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQ
Sbjct: 121 LDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQ 180
Query: 181 VLDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVTG 240
VLDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVTG
Sbjct: 181 VLDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVTG 240
Query: 241 GPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRIW 300
GPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRIW
Sbjct: 241 GPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRIW 300
Query: 301 GPEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIIIR 360
GPEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIIIR
Sbjct: 301 GPEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIIIR 360
Query: 361 HHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME 420
HHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME
Sbjct: 361 HHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME 420
Query: 421 DHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEYV 480
DHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEYV
Sbjct: 421 DHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEYV 480
Query: 481 DVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYLE 540
DVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYLE
Sbjct: 481 DVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYLE 540
Query: 541 YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLVEAIYPEVK 600
YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLVEAIYPEVK
Sbjct: 541 YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLVEAIYPEVK 600
Query: 601 AKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGIIHDHFKEKYGED 660
AKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGIIHDHFKEKYGED
Sbjct: 601 AKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGIIHDHFKEKYGED 660
Query: 661 SPIITLAYGPDFAVVRASDGMARYNFDLNKIVKVLEEKLPDAGVEGGGHSYAGSIKFFEG 720
SPIITLAYGPDFAVVRASDGMARYNFDLNKIVKVLEEKLPDAGVEGGGHSYAGSIKFFEG
Sbjct: 661 SPIITLAYGPDFAVVRASDGMARYNFDLNKIVKVLEEKLPDAGVEGGGHSYAGSIKFFEG 720
Query: 721 KRKEVLEAFAKEILKLKAGA 740
KRKEVLEAFAKEILKLKAGA
Sbjct: 721 KRKEVLEAFAKEILKLKAGA 740
>pir||A71141 hypothetical protein PH0340 - Pyrococcus horikoshii
>gi|3256731|dbj|BAA29414.1| (AP000002) 740aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 740
Score = 1474 bits (3775), Expect = 0.0
Identities = 698/739 (94%), Positives = 728/739 (98%)
Query: 1 MAVKDCPECHGTGKVKVGEKECPVCHGWGYVPADFNLSEHLKGYRNLDNLGVDDEVDEIP 60
MAV+DCPECHGTGK+KVGEKECPVCHGWGYVPADF L EHLKGYRNL NLGV++EVDEIP
Sbjct: 1 MAVRDCPECHGTGKIKVGEKECPVCHGWGYVPADFKLGEHLKGYRNLKNLGVEEEVDEIP 60
Query: 61 CPECHGKGVVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYV 120
CPECHGKG VPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYV
Sbjct: 61 CPECHGKGTVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYV 120
Query: 121 LDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQ 180
LDNACDYEDVE+GKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPG+EIIVQ
Sbjct: 121 LDNACDYEDVEVGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGEEIIVQ 180
Query: 181 VLDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVTG 240
VLDVRPDR+EIDFLEAPLTRYREVQVKKELP+TLIGDL+EELAGKTV+VRGKVTQVQVTG
Sbjct: 181 VLDVRPDRKEIDFLEAPLTRYREVQVKKELPVTLIGDLREELAGKTVKVRGKVTQVQVTG 240
Query: 241 GPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRIW 300
GPTVFTLTDGTGITWAAAFEAPGVRAYPN+NIGDVVEVIGKVSFHAGRIQIEI+DMHRIW
Sbjct: 241 GPTVFTLTDGTGITWAAAFEAPGVRAYPNVNIGDVVEVIGKVSFHAGRIQIEIVDMHRIW 300
Query: 301 GPEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIIIR 360
GPEALEVKKRIEEELDKKA+P+DVGFLVKSEVLE LKPKIMKAAFMIRRAIFEGRPII+R
Sbjct: 301 GPEALEVKKRIEEELDKKAQPKDVGFLVKSEVLEALKPKIMKAAFMIRRAIFEGRPIILR 360
Query: 361 HHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME 420
HHADTDGYTAGVALETAIVPLIE+VAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME
Sbjct: 361 HHADTDGYTAGVALETAIVPLIEEVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME 420
Query: 421 DHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEYV 480
DH RFGDELPL+VIVDNGGT+EDIPAYKRLKAYGVKIVVIDHHDPR+WISEDKAKVDEYV
Sbjct: 421 DHMRFGDELPLVVIVDNGGTTEDIPAYKRLKAYGVKIVVIDHHDPRDWISEDKAKVDEYV 480
Query: 481 DVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYLE 540
DVHVNPHHVKRGYYELTAGMLATEVAR++NP VEDKIKHLPAIAGTGDRSKAPEFYQYLE
Sbjct: 481 DVHVNPHHVKRGYYELTAGMLATEVARYVNPAVEDKIKHLPAIAGTGDRSKAPEFYQYLE 540
Query: 541 YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLVEAIYPEVK 600
YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIE+ILLVTGNLQRHRMLV++IY EVK
Sbjct: 541 YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEDILLVTGNLQRHRMLVDSIYSEVK 600
Query: 601 AKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGIIHDHFKEKYGED 660
KQE+VLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSG+IHDHFKEKYGE+
Sbjct: 601 EKQEKVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGLIHDHFKEKYGEE 660
Query: 661 SPIITLAYGPDFAVVRASDGMARYNFDLNKIVKVLEEKLPDAGVEGGGHSYAGSIKFFEG 720
SPI+TLAYGPDFAVVRASDGMA+YNFDLNKIVK+L EKLPDAGVEGGGHSYAGSIKFFEG
Sbjct: 661 SPILTLAYGPDFAVVRASDGMAKYNFDLNKIVKILAEKLPDAGVEGGGHSYAGSIKFFEG 720
Query: 721 KRKEVLEAFAKEILKLKAG 739
KRKEVLEAFAKEI KLKAG
Sbjct: 721 KRKEVLEAFAKEIFKLKAG 739
>pir||E64449 hypothetical protein MJ1198 - Methanococcus jannaschii
>gi|1591827|gb|AAB99202.1| (U67561) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 761
Score = 750 bits (1915), Expect = 0.0
Identities = 382/764 (50%), Positives = 525/764 (68%), Gaps = 34/764 (4%)
Query: 1 MAVKDCPECHGTGKVKVGEKECPVCHGWGYVPADFNLSEHLKGYRNLDNLGVDDEVDEIP 60
M VK CP C GTGK V K CPVC G G++ +F+ +H+K R D + EIP
Sbjct: 1 MIVK-CPICDGTGKKVVKYKTCPVCEGTGFID-EFSPKQHMK--RVSKRATYDLDYGEIP 56
Query: 61 CPECHGKGVVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPEC-----ERK- 114
CP+C G G VPVY C CGG+GKV+ CD CG I G + P + +C +C ERK
Sbjct: 57 CPKCKGTGKVPVYAKCDFCGGSGKVVKCDRCGAIIGKY-PDFKDRTLCDKCLKEEEERKK 115
Query: 115 -FKVVYVLDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKR--QY 171
+ VYV D + DVE GK+YKG++ R+E++G F+ LN+ V GL++ +D++ R
Sbjct: 116 GLRNVYVFDELATFYDVEPGKFYKGVVTRIEKYGAFINLNEQVRGLLRPRDMISLRLENL 175
Query: 172 IPGDEIIVQVLDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKE---ELAGKTVR 228
GDEIIVQ +DVRP++REIDF PLT Y V+ +KE+P++ I D+ + E+ + V
Sbjct: 176 NVGDEIIVQAIDVRPEKREIDFKYIPLTTYDLVKYEKEVPLSQIKDISQNLVEMRDQVVH 235
Query: 229 VRGKVTQVQVTGGPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGR 288
+RG+V Q+ T GPTVFT+TDGT W AA E G+RA+P++ +GD+V+VIG+V+ GR
Sbjct: 236 IRGEVVQIVQTPGPTVFTITDGTDFAWVAALEIAGLRAHPDVKVGDIVDVIGRVTIRDGR 295
Query: 289 IQIEIIDMHRIWGPEALEVKKRIEEELDKKAKP-EDVGFLVKSEVLEKLKPKIMKAAFMI 347
+QIE I + ++ G EA E++K+IEEE+D++A+P +D+ FLVKSEVLE+L+PK+ A I
Sbjct: 296 LQIERIKLQKLEGDEAEEIRKKIEEEIDRRAEPAKDIPFLVKSEVLERLRPKMADVAKRI 355
Query: 348 RRAIFEGRPIIIRHHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYE 407
R+A+ +GRPIIIRHHADTDGY G+ALE AI+P+I++ A D DA WH FKRRPS+APFYE
Sbjct: 356 RKAVLDGRPIIIRHHADTDGYCGGIALEKAILPIIDKFAIDVDAIWHFFKRRPSKAPFYE 415
Query: 408 LEDVLKDIIFMMEDHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPRE 467
LEDV KD++F +ED +FG +LPLIV++DNG T EDIPA + KAYG++++VIDHH P E
Sbjct: 416 LEDVTKDLVFSIEDALKFGQKLPLIVLIDNGSTDEDIPAISKAKAYGIEVIVIDHHFPGE 475
Query: 468 WISEDKAKVDEYVDVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTG 527
+ + K +VD+YVD HVNP+ V G LTAG+L TE+AR INP+VED+IKH+P IA G
Sbjct: 476 -VVDGKVEVDDYVDAHVNPYLV-GGDSNLTAGVLGTEIARMINPDVEDEIKHIPGIAVVG 533
Query: 528 DRSKAPEFYQYL------------EYAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGII 575
D +K E QY+ +Y K + E L+KIA +D EAFY +FMDG+GI+
Sbjct: 534 DHAKGEEAEQYVKIALDRLNELSKKYGKGRTYDREYLEKIALCMDFEAFYLRFMDGKGIV 593
Query: 576 EEILLVT-GNLQRHRMLVEAIYPEVKAKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYA 634
++IL RH L++ +Y + ER ++AV+P +K+ L NGI NT+DVE YA
Sbjct: 594 DDILATNIKEFGRHEELIDILYEQAMKMVERQMKAVIPALKTEFLENGIILNTLDVEKYA 653
Query: 635 PKFDYPSPGKLSGIIHDHFKEKYGEDSPIITLAYGPDFAVVRASDGM-ARYNFDLNKIVK 693
KF +P+PGK +G HD+ +KYGED PIITL+YGPDF VVRA+D + +YNF+LN IV+
Sbjct: 654 HKFTFPAPGKTTGFAHDYIVQKYGEDKPIITLSYGPDFGVVRATDAVHEKYNFNLNLIVE 713
Query: 694 VLEEKLPDAGVEGGGHSYAGSIKFFEGKRKEVLEAFAKEILKLK 737
L E++P+A ++GGGH AGS+KF EG R +V+ F + I +K
Sbjct: 714 QLMEEIPEASLDGGGHECAGSLKFVEGLRDKVIGRFIEIIKNMK 757
>pir||A69202 conserved hypothetical protein MTH763 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621853|gb|AAB85266.1| (AE000855) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 729
Score = 730 bits (1865), Expect = 0.0
Identities = 362/739 (48%), Positives = 513/739 (68%), Gaps = 20/739 (2%)
Query: 3 VKDCPECHGTGKVKVGEKECPVCHGWGYVPADFNLSEHLKGYRNLDNLGVD-DEVDEIPC 61
++ C EC G G K C CHG G+ + ++ +H KG N D ++ E+PC
Sbjct: 6 IQSCNECKGKGYRVKSYKICSACHGTGFRSTE-DIKDHFKGVSNSARQRFDLEDSHEVPC 64
Query: 62 PECHGKGVVPVYDTCPTCGGTGKVLVCDICGRI-KGPWEPGMETTWVCPECERKFKVVYV 120
C GKG V V +TCPTCGG G+V +C CGR+ KG E CPEC++K KV Y+
Sbjct: 65 EVCRGKGEVEVRETCPTCGGKGEVNICPSCGRMMKGRDE-------YCPECQKKEKV-YI 116
Query: 121 LDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQ 180
L AC +D+E+G Y+G I RVE++GVFV LN HV GL++ Y GDE+ V+
Sbjct: 117 LHPACTMDDLEVGSIYRGKITRVEKYGVFVSLNSHVWGLMRGLF----PDYKVGDELFVR 172
Query: 181 VLDVRPDRREIDFLEAPLTR-YREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVT 239
V V+P + E+D + A + Y +++KK+LP T I D+ + GKTVR+ G+V Q+Q T
Sbjct: 173 VSQVKPYKGEVDMIPASIKGPYEVIKLKKDLPRTRIADIDTKSLGKTVRIVGEVIQIQQT 232
Query: 240 GGPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRI 299
GPT+FT++D TG TWAAAF+ PG+R YP+I IG +VEVIG+V+ H G+IQIE + R+
Sbjct: 233 SGPTIFTVSDETGTTWAAAFDEPGIRVYPHIQIGHIVEVIGEVNQHTGKIQIESESIERL 292
Query: 300 WGPEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIII 359
G EA E ++ I+E +D++A+PE L++SE LEKL+PK+++AA IRRA+++GR I++
Sbjct: 293 IGNEAAEARRLIDEAIDRRAEPERKDLLIESETLEKLRPKLVEAAKAIRRAVYDGRSILV 352
Query: 360 RHHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMM 419
RHHAD DG AGVA+E A++PL+ + P DA WH FKR PS+APFYELEDV+KD+ + +
Sbjct: 353 RHHADADGICAGVAIEKAVLPLLRDLNPSTDAEWHYFKRAPSKAPFYELEDVVKDLSYAL 412
Query: 420 EDHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEY 479
ED +R G +LPL+V++DNG T EDI A + K Y ++IVV+DHH P E + + + +VDEY
Sbjct: 413 EDLERHGQKLPLLVLLDNGSTEEDILALMKAKIYDIEIVVVDHHYPGE-VQDGRVEVDEY 471
Query: 480 VDVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYL 539
VD HVNP+ V G ++TAG L+ E+A+ INPE+ ++I HLP IA GD + +PE Y+
Sbjct: 472 VDTHVNPYLV-GGDSQITAGSLSVEIAKMINPEIAERILHLPGIAAVGDHANSPEAEAYI 530
Query: 540 EYAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLVEAIYPEV 599
E A E+G EDL++IA ID EAFY +FM+GRGII+ IL + G+L +H+ LV+A+Y E
Sbjct: 531 ELAAERGYEREDLERIAACIDFEAFYLRFMNGRGIIDTILGL-GSLDKHKKLVDALYREY 589
Query: 600 KAKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGIIHDHFKEKYGE 659
+ K + LRA +P++KS LPNGI FN +DVE Y+ +F +P+PGK G +HD+ +K+GE
Sbjct: 590 ERKVDTQLRAAIPNLKSTRLPNGILFNVLDVEKYSHRFTFPAPGKTCGFVHDYMVQKHGE 649
Query: 660 DSPIITLAYGPDFAVVRASDGM-ARYNFDLNKIVKVLEEKLPDAGVEGGGHSYAGSIKFF 718
D+PIITLAYGPDF V+RA+D + ++ F+LN+IV L E++P+A ++GGGH AGS+K+
Sbjct: 650 DTPIITLAYGPDFGVIRATDAVNEKFGFNLNEIVWELAEEIPEAVIDGGGHECAGSLKYI 709
Query: 719 EGKRKEVLEAFAKEILKLK 737
EG K+VL AFA+++ LK
Sbjct: 710 EGLSKKVLSAFAEKVAALK 728
>gi|11498935 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7450090|pir||H69416 conserved hypothetical protein
AF1337 - Archaeoglobus fulgidus
>gi|2649241|gb|AAB89907.1| (AE001011) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 692
Score = 522 bits (1331), Expect = e-147
Identities = 310/736 (42%), Positives = 435/736 (58%), Gaps = 50/736 (6%)
Query: 6 CPECHGTGKVKVGEKECPVCHGWGYVPA-DFNLSEHLKGYRNLDNLGVDDEVDEIP---C 61
C C G G +++ EKEC +C G G + D ++ L D+++ C
Sbjct: 3 CNACGGKGYIEI-EKECEICGGTGKAKSFDPKITAELS----------DEQIKMFMSGVC 51
Query: 62 PECHGKGVVPVYDTCPTCGGTGKVLVCDICGRIKGPWEPGMETTWVCPECERKFKVVYVL 121
C G G V + D C C GTGK C ICG E + +C C R+ Y L
Sbjct: 52 GVCRGTGKVKIMDVCRECNGTGKAGRCKICG------EKVVGNHDLCSRCRRQ-PHAYRL 104
Query: 122 DNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQV 181
N+C EDV I + Y G + V GVFV LNK + GLI +++L G ++ +EI+VQV
Sbjct: 105 RNSCGIEDVRINRVYVGTVSAVTDIGVFVNLNKRLRGLIHRRNL-GNNRFSEDEEILVQV 163
Query: 182 LDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVTGG 241
+ EID + Y+ V++ KE+ I +L E GK V VRG VT ++VTGG
Sbjct: 164 SGIGLSG-EIDLKPVKMDGYKVVEISKEVGRVEIAEL-ENYIGKMVEVRGLVTHIKVTGG 221
Query: 242 PTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRIWG 301
PT+FTL DG AAAFE G RAYP + + DVV VIG V ++QIEI++M ++ G
Sbjct: 222 PTIFTLLDGRASVQAAAFEG-GERAYPEVRVDDVVRVIGIVKRRENKLQIEILEMEKLLG 280
Query: 302 PEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIIIRH 361
EA EV+KR+E E+++ +P+ GFL++SEVLE LK ++K A +++AI+E RP+IIRH
Sbjct: 281 EEAYEVRKRVEAEIERACEPDFRGFLIESEVLEALKEDMLKVAKELKKAIYESRPVIIRH 340
Query: 362 HADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMMED 421
H D DG GVALE A+ L+E+V D +A+++L KRR SRAPFYELEDV++D+ +ED
Sbjct: 341 HWDADGTCGGVALEKALTDLVERVHSDSEAKYYLVKRRVSRAPFYELEDVVRDLDESLED 400
Query: 422 HQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEYVD 481
+R GD++PL+V+VDNG ED+PA ++ +G ++ IDHH P E +VD Y+
Sbjct: 401 AERHGDKIPLVVLVDNGSGLEDVPAIRQFLLFGADVITIDHHFPDE-------EVDSYLL 453
Query: 482 VHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYLEY 541
HVNP+ V G T+G+L E+AR I+ + +KHL AI+ GDR++ E +Y+E
Sbjct: 454 YHVNPYKV-GGDSNYTSGVLCVEIARMIS---DLDMKHLAAISVVGDRAEG-EVERYIEL 508
Query: 542 AKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLVEAIYPEVKA 601
+ G + E+L IA +++E FY +F I+ EI L G RH LV + K
Sbjct: 509 S---GKSREELADIALAVEYEGFYLRFRTASQIMHEI-LGFGRQDRHVKLVRMLSEYAKE 564
Query: 602 KQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGKLSGIIHDHFKEKYGEDS 661
E ++ + VK +LPNGI +DVE YA KF +P PGKL+G +HD K+KY
Sbjct: 565 AIEEQVKTAMEGVKVQILPNGIALAALDVENYAKKFTFPPPGKLTGEVHDRLKQKY---E 621
Query: 662 PIITLAYGPDFAVVRASDGMARYNFDLNKIVKVLEEKLPDAGVEGGGHSYAGSIKFFEGK 721
I+T+ YGPDFAV+R S+G+ D+ +IVK L E++ AGV+GGGH GSIKF + K
Sbjct: 622 RIVTIGYGPDFAVIR-SEGV---ELDIPRIVKELREEIV-AGVDGGGHLVVGSIKFVQAK 676
Query: 722 RKEVLEAFAKEILKLK 737
RKEVL A +I LK
Sbjct: 677 RKEVLARLAAKIGNLK 692
>gb|AAG19248.1| (AE005020) Vng0779c [Halobacterium sp. NRC-1]
Length = 604
Score = 364 bits (924), Expect = 2e-99
Identities = 206/527 (39%), Positives = 296/527 (56%), Gaps = 15/527 (2%)
Query: 121 LDNACDYEDVEIGKYYKGIIDRVERFGVFVRLNKHVLGLIKKKDLLGKRQYIPGDEIIVQ 180
LD +C ++VE G+YY ++ V +G FV L++HV GLI + G D++IV
Sbjct: 18 LDASCTTQEVEAGEYYHATVNGVVEYGAFVDLSEHVSGLIHESTYSGDPDLAVDDDVIVH 77
Query: 181 VLDVRPDRREIDFLEAPLTRYREVQVKKELPITLIGDLKEELAGKTVRVRGKVTQVQVTG 240
+ VR D ++ F YR Q T D G TV + G+V Q++ T
Sbjct: 78 LSAVR-DNGDLSFEFVDPEEYRTEQRSHAYERTT-ADAVGSRIGDTVHIEGEVVQIKQTA 135
Query: 241 GPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVVEVIGKVSFHAGRIQIEIIDMHRIW 300
GPTVF + D T AFE GVRA+P + +GD+V V G G Q+E+ +
Sbjct: 136 GPTVFRVRDETSAIPCTAFEDAGVRAHPGVEVGDIVHVSGDADDREGTTQLEVDAFEVLS 195
Query: 301 GPEALEVKKRIEEELDKKAKPEDVGFLVKSEVLEKLKPKIMKAAFMIRRAIFEGRPIIIR 360
G ++ +V +R++ L ++A P DV LV LE+L P + A +RRA+ EGRPI +R
Sbjct: 196 GGDSADVARRLDAALAEQADPVDVDALVDWPALEQLLPDLRSVARTLRRAVLEGRPIRMR 255
Query: 361 HHADTDGYTAGVALETAIVPLIEQVAPDPDARWHLFKRRPSRAPFYELEDVLKDIIFMME 420
HHAD DG A + ++ A+ IE D DA HL KR PS+AP+YE+ED +D+ F +E
Sbjct: 256 HHADGDGMCASLPVQYALRQFIEDTHQDEDAARHLLKRLPSKAPYYEMEDATRDLNFALE 315
Query: 421 DHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGVKIVVIDHHDPREWISEDKAKVDEYV 480
D R G +LPL++++DNG T ED PAYK L Y + IVV+DHH P D VD V
Sbjct: 316 DRARHGQKLPLLLMLDNGSTEEDTPAYKTLDNYDIPIVVVDHHHP------DPGAVDPLV 369
Query: 481 DVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDRSKAPEFYQYLE 540
D HVNP ++ Y +T GML E+AR I P + ++H+PA+AG DRSKA YL+
Sbjct: 370 DEHVNP-YLHGEDYRITTGMLCVELARMIYPGITSDLEHVPAVAGLSDRSKADAMTDYLD 428
Query: 541 YAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGIIEEILLVTGNLQRHRMLV---EAIYP 597
A++ G E L++++E +D+EA+ ++ G +I +IL V G+ QRHR LV + +
Sbjct: 429 LARDAGYDESFLQQMSEALDYEAYMLRYDHGTQVIADILNVDGDAQRHRELVPFLDRLAS 488
Query: 598 EVKAKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAPKFDYPSPGK 644
E A+Q L A HV+ + +G IDVE +A +F YP G+
Sbjct: 489 EAVAEQ---LDATRSHVEHERVASGANLYRIDVENHAHRFTYPRAGE 532
>gb|AAG19805.1| (AE005065) Vng1511c [Halobacterium sp. NRC-1]
Length = 684
Score = 226 bits (571), Expect = 6e-58
Identities = 162/519 (31%), Positives = 247/519 (47%), Gaps = 35/519 (6%)
Query: 217 DLKEELAGKTVRVRGKVTQVQVTGGPTVFTLTDGTGITWAAAFEAPGVRAYPNINIGDVV 276
D ++ V V G++T + T GPTVF LTD TG AAAF GVRAYP I G VV
Sbjct: 194 DALDDHVDDAVTVEGEITAARQTSGPTVFELTDETGAVDAAAFVEAGVRAYPEIEPGAVV 253
Query: 277 EVIGKVSFHAGRIQIEIIDMHRIWGPEALEVKKRIEEELDKKAKPEDVGFLVKSE-VLEK 335
++ G V G +Q+E + + G A EV+ R++ LD +A P L + +
Sbjct: 254 QLTGTVERRRGDLQVETEAVTELTGDRADEVRNRMDAALDDRAAPATTALLAPDDDAVAA 313
Query: 336 LKPKIMKAAFMIRRAIFEGRPIIIRHHADTDGYTAGVALETAIVPLIEQVAPDPDARWHL 395
+ I+ AA +RRA+ + RP+I+RH +GY AG A+E A++PLI DA +H
Sbjct: 314 VHDDIVDAATAVRRAVIDARPVIVRHPTTVEGYVAGTAIERALLPLIRDEHAREDAEYHY 373
Query: 396 FKRRPSRAPFYELEDVLKDIIFMMEDHQRFGDELPLIVIVDNGGTSEDIPAYKRLKAYGV 455
RRP FY ++D D+ M+E R ++ PL V V G T+E A L Y
Sbjct: 374 VDRRPLDDAFYTIDDATGDVTSMLEAAHRHDEKHPLFVFVGTGSTTESTDALDLLDIYDA 433
Query: 456 KIVVIDHHDPREWISEDKAKVDEYVDVHVNPHHVKRGYYELTAGMLATEVARFINPEVED 515
VV+D ++D A +DV V+P G + G L ++A IN +V +
Sbjct: 434 DTVVVD-----GGYADDAAG----MDVLVSP--TAAGEQPVNTGALGAQLAAVINDDVRE 482
Query: 516 KIKHLPAIAGTGDRSKAPEFYQYLEYAKEKGLTEEDLKKIAEVIDHEAFYWKFMDGRGII 575
+ HLPA+A D A Y + A + + + + + + EAFY + D R +I
Sbjct: 483 DLAHLPAVAYWTDLPAA-----YADLAADASYDSDAREALRDAVALEAFYQSYEDKRELI 537
Query: 576 EEILLVTGNLQRHRMLVEAIYPEVKAKQERVLRAVLPHVKSVVLPNGIRFNTIDVELYAP 635
++L + L + I + + + L PH+ S +G+ F T+DV Y
Sbjct: 538 ADLLWGDADDD----LADHIATQFRDRLATELSTAEPHL-STRHHDGVAFETLDVGAYTH 592
Query: 636 KFDYPSPGKLSGIIHDHFKEKYGEDSPIITLAYGPDFAVVRASDGMARYNFDLNKIVKVL 695
++D+P L +H DS + L G D VR+ D + D++ +V +
Sbjct: 593 QYDFPPVDLLLDALHRR------ADSTDVLLGAGEDALRVRSDDAV-----DVHAVVDAI 641
Query: 696 EEKL-PDAGVEGGGHSYAGSIKFFEGKRKEVLEAFAKEI 733
++ L AGV G + G I+F G+R VL+A I
Sbjct: 642 DDDLTTTAGVTARG-ARDGRIEFLAGERDAVLDAVVDAI 679
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.142 0.429
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 303169103
Number of Sequences: 2977
Number of extensions: 14283196
Number of successful extensions: 34894
Number of sequences better than 1.0e-10: 7
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34813
Number of HSP's gapped (non-prelim): 9
length of query: 740
length of database: 189,106,746
effective HSP length: 54
effective length of query: 686
effective length of database: 156,788,448
effective search space: 107556875328
effective search space used: 107556875328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 169 (70.2 bits)