BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1313 (lon) DE:ATP-dependent protease La (lon)
(998 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75005 ATP-dependent proteinase la (lon) PAB1313 - Pyrococc... 1966 0.0
pir||E71156 endopeptidase La homolog (EC 3.4.21.-) - Pyrococcus ... 1499 0.0
pir||H69204 endopeptidase La homolog (EC 3.4.21.-) - Methanobact... 577 e-163
gi|11497976 ATP-dependent protease La (lon) [Archaeoglobus fulgi... 571 e-161
emb|CAC12209.1| (AL445066) ATP-dependent proteinase La (Lon) rel... 528 e-148
gb|AAG18884.1| (AE004991) lipoate protein ligase; Lon [Halobacte... 502 e-141
pir||H64476 endopeptidase La homolog (EC 3.4.21.-) - Methanococc... 278 2e-73
emb|CAC11246.1| (AL445063) conserved hypothetical protein [Therm... 208 2e-52
pir||C69219 endopeptidase La-related protein - Methanobacterium ... 196 1e-48
pir||F72202 hypothetical protein TM1869 - Thermotoga maritima (s... 155 2e-36
dbj|BAB06770.1| (AP001517) ATP-dependent proteinase La [Bacillus... 151 4e-35
sp|P42425|LON2_BACSU ATP-DEPENDENT PROTEASE LA HOMOLOG >gi|74282... 140 6e-32
sp|O52605|LON_BRUAB ATP-DEPENDENT PROTEASE LA >gi|2801672|gb|AAB... 136 9e-31
sp|P36773|LON1_MYXXA ATP-DEPENDENT PROTEASE LA 1 >gi|540928|pir|... 136 2e-30
emb|CAA12120.1| (AJ224767) Lon-protease [Acinetobacter sp. ADP1] 130 7e-29
sp|P37945|LON1_BACSU ATP-DEPENDENT PROTEASE LA 1 >gi|2118118|pir... 128 3e-28
pir||H81908 probable endopeptidase La (EC 3.4.21.53) NMA1398 [im... 126 1e-27
pir||H81106 ATP-dependent proteinase La NMB1231 [imported] - Nei... 126 1e-27
gb|AAF65564.1|AF250140_1 (AF250140) protease Lon [Pseudomonas fl... 125 2e-27
gb|AAG29872.1|AF313764_15 (AF313764) partial ATP-dependent prote... 125 2e-27
pir||G83420 Lon proteinase PA1803 [imported] - Pseudomonas aerug... 123 7e-27
sp|P77810|LON_AZOBR ATP-DEPENDENT PROTEASE LA >gi|2118119|pir||J... 123 9e-27
pir||G82141 ATP-dependent LA proteinase VC1920 [imported] - Vibr... 123 9e-27
pir||H82392 ATP-dependent LA-related proteinase VCA0975 [importe... 122 3e-26
sp|O66605|LON_AQUAE ATP-DEPENDENT PROTEASE LA >gi|7428227|pir||A... 120 1e-25
gb|AAF97782.1|AF247974_1 (AF247974) Lon protease [Thermus thermo... 119 1e-25
sp|P52977|LON_CAUCR ATP-DEPENDENT PROTEASE LA >gi|1667399|gb|AAB... 119 2e-25
gb|AAF05300.1|AF167159_1 (AF167159) Lon protease [Sinorhizobium ... 119 2e-25
sp|O69177|LON_RHIME ATP-DEPENDENT PROTEASE LA 119 2e-25
sp|P74956|LON_VIBPA ATP-DEPENDENT PROTEASE LA >gi|1655939|gb|AAC... 118 3e-25
pir||G75331 ATP-dependent proteinase LA - Deinococcus radioduran... 118 3e-25
pir||A72230 endopeptidase La (EC 3.4.21.53) - Thermotoga maritim... 118 4e-25
pir||C82712 ATP-dependent serine proteinase La XF1189 [imported]... 118 4e-25
dbj|BAB06769.1| (AP001517) ATP-dependent proteinase La 1 (lon) (... 118 4e-25
gb|AAA24079.1| (M38347) ATP-dependent proteinase (lon) [Escheric... 117 5e-25
sp|P08177|LON_ECOLI ATP-DEPENDENT PROTEASE LA >gi|7428225|pir||S... 117 5e-25
gb|AAA16837.1| (L20572) ATP-dependent protease [Escherichia coli] 117 5e-25
gb|AAB40195.1| (U82664) ATP-dependent protease LA [Escherichia c... 117 5e-25
sp|P36772|LON_BACBR ATP-DEPENDENT PROTEASE LA >gi|98087|pir||B42... 117 7e-25
gb|AAA24078.1| (J03896) protease La (lon) [Escherichia coli] 114 4e-24
sp|P46067|LON_ERWAM ATP-DEPENDENT PROTEASE LA >gi|628639|pir||S4... 114 4e-24
sp|P43864|LON_HAEIN ATP-DEPENDENT PROTEASE LA >gi|1073891|pir||A... 114 4e-24
sp|Q9ZD92|LON_RICPR ATP-DEPENDENT PROTEASE LA >gi|7428226|pir||A... 114 6e-24
pir||B75530 ATP-dependent proteinase LA - Deinococcus radioduran... 112 2e-23
pir||T27382 hypothetical protein Y75B8A.4 - Caenorhabditis elega... 111 5e-23
pir||E71377 probable ATP-dependent proteinase LA (lon-1) - syphi... 109 1e-22
sp|O51558|LON2_BORBU ATP-DEPENDENT PROTEASE LA HOMOLOG >gi|74282... 106 1e-21
emb|CAA76672.1| (Y17166) protease La [Campylobacter jejuni] 104 5e-21
sp|O69300|LON_CAMJE ATP-DEPENDENT PROTEASE LA >gi|11265377|pir||... 104 5e-21
sp|P36774|LON2_MYXXA ATP-DEPENDENT PROTEASE LA 2 >gi|625654|pir|... 102 2e-20
sp|P57549|LON_BUCAI ATP-DEPENDENT PROTEASE LA >gi|10039140|dbj|B... 101 4e-20
pir||A36894 ATP-dependent proteinase BsgA - Myxococcus xanthus 100 7e-20
emb|CAC04500.1| (AL391588) ATP-dependent protease [Streptomyces ... 98 6e-19
pir||A71825 endopeptidase La (EC 3.4.21.53) - Helicobacter pylor... 96 2e-18
sp|P75867|LONH_ECOLI PUTATIVE PROTEASE LA HOMOLOG >gi|7449426|pi... 95 3e-18
pir||F83073 probable ATP-dependent proteinase PA4576 [imported] ... 94 7e-18
sp|P55995|LON_HELPY ATP-DEPENDENT PROTEASE LA >gi|7428229|pir||C... 92 2e-17
sp|O83536|LON_TREPA ATP-DEPENDENT PROTEASE LA >gi|7428233|pir||B... 91 6e-17
sp|O64948|LON1_ARATH MITOCHONDRIAL LON PROTEASE HOMOLOG 1 PRECUR... 89 3e-16
sp|P93647|LON1_MAIZE MITOCHONDRIAL LON PROTEASE HOMOLOG 1 PRECUR... 88 4e-16
dbj|BAA77218.1| (AB026197) LON protease homologue [Lithospermum ... 87 7e-16
emb|CAA52291.1| (X74215) Lon protease-like protein [Homo sapiens] 86 2e-15
gi|4758682 protease, serine, 15; Lon protease-like protein [Homo... 86 2e-15
gb|AAD24414.1|AF059309_1 (AF059309) LON protease [Homo sapiens] 85 3e-15
gi|11424964 protease, serine, 15 [Homo sapiens] 85 3e-15
dbj|BAA35713.1| (D90733) Lon protease (lon) homolog [Escherichia... 85 5e-15
sp|P36776|LONM_HUMAN MITOCHONDRIAL LON PROTEASE HOMOLOG PRECURSO... 84 6e-15
sp|O44952|LONM_CAEEL MITOCHONDRIAL LON PROTEASE HOMOLOG PRECURSO... 83 1e-14
sp|O04979|LON1_SPIOL MITOCHONDRIAL LON PROTEASE HOMOLOG 1 PRECUR... 83 2e-14
pir||D82901 ATP-dependent proteinase UU348 [imported] - Ureaplas... 82 2e-14
sp|O31147|LON_MYCSM ATP-DEPENDENT PROTEASE LA >gi|2623234|gb|AAB... 80 1e-13
sp|Q59185|LON_BORBU ATP-DEPENDENT PROTEASE LA >gi|7428234|pir||E... 79 2e-13
gb|AAF49134.1| (AE003516) CG8798 gene product [Drosophila melano... 79 3e-13
sp|P93655|LON2_ARATH MITOCHONDRIAL LON PROTEASE HOMOLOG 2 PRECUR... 78 6e-13
pir||C82194 ATP-dependent proteinase LA-related protein VC1482 [... 77 8e-13
sp|P47481|LON_MYCGE ATP-DEPENDENT PROTEASE LA >gi|1361460|pir||D... 77 1e-12
sp|Q9Z9F4|LON_CHLPN ATP-DEPENDENT PROTEASE LA >gi|7428232|pir||B... 77 1e-12
sp|P43865|LONH_HAEIN PUTATIVE PROTEASE LA HOMOLOG >gi|1074982|pi... 76 1e-12
sp|O84348|LON_CHLTR ATP-DEPENDENT PROTEASE LA >gi|7428231|pir||C... 76 2e-12
sp|P78025|LON_MYCPN ATP-DEPENDENT PROTEASE LA >gi|2146077|pir||S... 75 3e-12
pir||E81681 proteinase, Lon family TC0623 [imported] - Chlamydia... 75 3e-12
gb|AAF26081.1|AC012393_7 (AC012393) putative mitochondrial LON A... 75 5e-12
pir||F83549 probable ATP-dependent proteinase PA0779 [imported] ... 75 5e-12
gb|AAF26080.1|AC012393_6 (AC012393) putative mitochondrial LON A... 74 7e-12
sp|P93648|LON2_MAIZE MITOCHONDRIAL LON PROTEASE HOMOLOG 2 PRECUR... 74 9e-12
>pir||H75005 ATP-dependent proteinase la (lon) PAB1313 - Pyrococcus abyssi
(strain Orsay) >gi|5459000|emb|CAB50486.1| (AJ248288)
ATP-dependent protease La (lon) [Pyrococcus abyssi]
Length = 998
Score = 1966 bits (5036), Expect = 0.0
Identities = 998/998 (100%), Positives = 998/998 (100%)
Query: 1 MLKFYKMGIKRLSGEMTMGEERMDLGIEFETTEEIPVPERLIDQVIGQDHAVEVIKTAAK 60
MLKFYKMGIKRLSGEMTMGEERMDLGIEFETTEEIPVPERLIDQVIGQDHAVEVIKTAAK
Sbjct: 1 MLKFYKMGIKRLSGEMTMGEERMDLGIEFETTEEIPVPERLIDQVIGQDHAVEVIKTAAK 60
Query: 61 QRRHVLLIGEPGTGKSMLGQAMAELLPTEDLEDILVFPNPEDENMPRIKTVPAGQGRRIV 120
QRRHVLLIGEPGTGKSMLGQAMAELLPTEDLEDILVFPNPEDENMPRIKTVPAGQGRRIV
Sbjct: 61 QRRHVLLIGEPGTGKSMLGQAMAELLPTEDLEDILVFPNPEDENMPRIKTVPAGQGRRIV 120
Query: 121 EEYKRKAKEQENIRFYLLFFVFFIVAMAVFMSRGDPNTLLLGVFVILIALMVTANMRFRT 180
EEYKRKAKEQENIRFYLLFFVFFIVAMAVFMSRGDPNTLLLGVFVILIALMVTANMRFRT
Sbjct: 121 EEYKRKAKEQENIRFYLLFFVFFIVAMAVFMSRGDPNTLLLGVFVILIALMVTANMRFRT 180
Query: 181 QAMVPKLLVDNSGRKRAPFVDATGAHAGALLGDVRHDPFQCFSGEETVVIRENGEVKVLR 240
QAMVPKLLVDNSGRKRAPFVDATGAHAGALLGDVRHDPFQCFSGEETVVIRENGEVKVLR
Sbjct: 181 QAMVPKLLVDNSGRKRAPFVDATGAHAGALLGDVRHDPFQCFSGEETVVIRENGEVKVLR 240
Query: 241 LKDFVEKALEKPSGEGLDGDVKVVYHDFRNENVEVLTKDGFTKLLYANKRIGKQKLRRVV 300
LKDFVEKALEKPSGEGLDGDVKVVYHDFRNENVEVLTKDGFTKLLYANKRIGKQKLRRVV
Sbjct: 241 LKDFVEKALEKPSGEGLDGDVKVVYHDFRNENVEVLTKDGFTKLLYANKRIGKQKLRRVV 300
Query: 301 NLEKDYWFALTPDHKVYTTDGLKEAGEITEKDELISVPITVFDCEDEDLKKIGLLPLTSD 360
NLEKDYWFALTPDHKVYTTDGLKEAGEITEKDELISVPITVFDCEDEDLKKIGLLPLTSD
Sbjct: 301 NLEKDYWFALTPDHKVYTTDGLKEAGEITEKDELISVPITVFDCEDEDLKKIGLLPLTSD 360
Query: 361 DERLRKIATLMGILFNGGSIDEGLGVLTLKSERSVIEKFVITLKELFGKFEYEIIKEENT 420
DERLRKIATLMGILFNGGSIDEGLGVLTLKSERSVIEKFVITLKELFGKFEYEIIKEENT
Sbjct: 361 DERLRKIATLMGILFNGGSIDEGLGVLTLKSERSVIEKFVITLKELFGKFEYEIIKEENT 420
Query: 421 ILKTRDPRIIKFLVGLGAPIEGKDLKMPWWVKLKPSLFLAFLEGFRAHIVEQLVDDPNKN 480
ILKTRDPRIIKFLVGLGAPIEGKDLKMPWWVKLKPSLFLAFLEGFRAHIVEQLVDDPNKN
Sbjct: 421 ILKTRDPRIIKFLVGLGAPIEGKDLKMPWWVKLKPSLFLAFLEGFRAHIVEQLVDDPNKN 480
Query: 481 LPFFQELSWYLGLFGIKADIKVEEVGDKHKIIFDAGRLDVDKQFIETWEDVEVTYNLTTE 540
LPFFQELSWYLGLFGIKADIKVEEVGDKHKIIFDAGRLDVDKQFIETWEDVEVTYNLTTE
Sbjct: 481 LPFFQELSWYLGLFGIKADIKVEEVGDKHKIIFDAGRLDVDKQFIETWEDVEVTYNLTTE 540
Query: 541 KGNLLANGLFVKNSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQE 600
KGNLLANGLFVKNSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQE
Sbjct: 541 KGNLLANGLFVKNSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQE 600
Query: 601 KKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTT 660
KKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTT
Sbjct: 601 KKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTT 660
Query: 661 MPDTVENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGV 720
MPDTVENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGV
Sbjct: 661 MPDTVENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGV 720
Query: 721 VRAAGDIAVRKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVN 780
VRAAGDIAVRKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVN
Sbjct: 721 VRAAGDIAVRKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVN 780
Query: 781 GLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS 840
GLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS
Sbjct: 781 GLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS 840
Query: 841 RYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVT 900
RYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVT
Sbjct: 841 RYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVT 900
Query: 901 PKIEAAIEAGIKKVIIPKANEKDVFLSPDKREKIEIIPVERIDEVLEVALVESEKKKELI 960
PKIEAAIEAGIKKVIIPKANEKDVFLSPDKREKIEIIPVERIDEVLEVALVESEKKKELI
Sbjct: 901 PKIEAAIEAGIKKVIIPKANEKDVFLSPDKREKIEIIPVERIDEVLEVALVESEKKKELI 960
Query: 961 KRIRETLPLGVSESAGSETLHEHGRDSGSALSVEESKA 998
KRIRETLPLGVSESAGSETLHEHGRDSGSALSVEESKA
Sbjct: 961 KRIRETLPLGVSESAGSETLHEHGRDSGSALSVEESKA 998
>pir||E71156 endopeptidase La homolog (EC 3.4.21.-) - Pyrococcus horikoshii
>gi|3256855|dbj|BAA29538.1| (AP000002) 1127aa long
hypothetical ATP-dependent protease La [Pyrococcus
horikoshii]
Length = 1127
Score = 1499 bits (3837), Expect = 0.0
Identities = 805/1128 (71%), Positives = 884/1128 (78%), Gaps = 143/1128 (12%)
Query: 12 LSGEMTMGEERMDLGIEFETTEEIPVPERLIDQVIGQDHAVEVIKTAAKQRRHVLLIGEP 71
LSGE M EERMDLGIEFETTEEIPVPERLIDQVIGQDHAVEVIKTAAKQRRHVLLIGEP
Sbjct: 2 LSGESEMDEERMDLGIEFETTEEIPVPERLIDQVIGQDHAVEVIKTAAKQRRHVLLIGEP 61
Query: 72 GTGKSMLGQAMAELLPTEDLEDILVFPNPEDENMPRIKTVPAGQGRRIVEEYKRKAKEQE 131
GTGKSMLGQAMAELLPTE+LEDILVFPNPEDENMPRIKTVPAGQGR+IVEEY+RKAKEQE
Sbjct: 62 GTGKSMLGQAMAELLPTEELEDILVFPNPEDENMPRIKTVPAGQGRKIVEEYRRKAKEQE 121
Query: 132 NIRFYLLFFVFFIVAMAVFMSRGDPNTLLLGVFVILIALMVTANMRFRTQAMVPKLLVDN 191
+RFYLLFFVFFIVAMAVF+S GDPNTLLLGVFVIL+ALMVTANMRF+TQAMVPKLLVDN
Sbjct: 122 GVRFYLLFFVFFIVAMAVFLSHGDPNTLLLGVFVILVALMVTANMRFKTQAMVPKLLVDN 181
Query: 192 SGRKRAPFVDATGAHAGALLGDVRHDPFQCFSGEETVVIRENGEVKVLRLKDFVEKALEK 251
SGRKRAPFVDATGAHAGALLGDVRHDPFQCFSGEE +++ + + KV++L++FVE AL++
Sbjct: 182 SGRKRAPFVDATGAHAGALLGDVRHDPFQCFSGEEVIIVEKGKDRKVVKLREFVEDALKE 241
Query: 252 PSGEGLDGDVKVVYHDFRNENVEVLTKDGFTKLLYANKRIGKQKLRRVVNLEKDYWFALT 311
PSGEG+DGD+KV Y D R E+V +LTKDGF KLLY NKR GKQKLR++VNL+KDYW A+T
Sbjct: 242 PSGEGMDGDIKVTYKDLRGEDVRILTKDGFVKLLYVNKREGKQKLRKIVNLDKDYWLAVT 301
Query: 312 PDHKVYTTDGLKEAGEITEKDELISVPITVFD------CEDEDLK------------KIG 353
PDHKV+T++GLKEAGEITEKDE+I VP+ + D ED K K G
Sbjct: 302 PDHKVFTSEGLKEAGEITEKDEIIRVPLVILDGPKIASTYGEDGKFDDYIRWKKYYEKTG 361
Query: 354 LLPLTSDDERLRKIATL----MGILFNGGSID---EGLGVLTLKSERSVIEKFVITL--- 403
+ E K +TL G N + E L +L L SE S +EK I L
Sbjct: 362 NGYKRAAKELNIKESTLRWWTQGAKPNSLKMIEELEKLNLLPLTSEDSRLEKVAIILGAL 421
Query: 404 ------------------------------KELFGKFEYEIIKE-----ENTILKTRDPR 428
KELFG+F YEI ++ + +T D R
Sbjct: 422 FSDGNIDRNFNTLSFISSERKAIERFVETLKELFGEFNYEIRDNHESLGKSILFRTWDRR 481
Query: 429 IIKFLVGLGAPIEGK---DLKMPWWVKLKPSLFLAFLEGFRA------------------ 467
II+F V LGAP+ K L++PWW+KLKPSLFLAF++G +
Sbjct: 482 IIRFFVALGAPVGNKTKVKLELPWWIKLKPSLFLAFMDGLYSGDGSVPRFARYEEGIKFN 541
Query: 468 --HIVEQLVDDPNKNLPFFQELSWYLGLFGIKADIKVEEVGDKHKI--IFD--------- 514
+ QL DD K LPFF+E++WYL FGIKA ++V++ GDK+K+ IF
Sbjct: 542 GTFEIAQLTDDVEKKLPFFEEIAWYLSFFGIKAKVRVDKTGDKYKVRLIFSQSIDNVLNF 601
Query: 515 --------------------------------AGRLD------------VDKQFIETWED 530
AGR++ + FIETWE
Sbjct: 602 LEFIPISLSPAKREKFLREVESYLAAVPESSLAGRIEELREHFNRIKKGERRSFIETWEV 661
Query: 531 VEVTYNLTTEKGNLLANGLFVKNSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKM 590
V VTYN+TTE GNLLANGLFVKNSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKM
Sbjct: 662 VNVTYNVTTETGNLLANGLFVKNSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKM 721
Query: 591 QQSLLTAMQEKKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRG 650
QQSLLTAMQEKKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRG
Sbjct: 722 QQSLLTAMQEKKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRG 781
Query: 651 YGYEVYMRTTMPDTVENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHL 710
YGYEVYMRTTMPDT ENRRKLVQFVAQEVKKDGRIPHFTRDAVEEI+REAQRRAGRKGHL
Sbjct: 782 YGYEVYMRTTMPDTPENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIVREAQRRAGRKGHL 841
Query: 711 TLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIR 770
TLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEAL++AKPLEKQLADWYIERKKEYQVIR
Sbjct: 842 TLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALKLAKPLEKQLADWYIERKKEYQVIR 901
Query: 771 TEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAI 830
EGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIA+EAVLNVSAI
Sbjct: 902 VEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAKEAVLNVSAI 961
Query: 831 IKRYKGEDISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVR 890
IKRYKGEDIS+YDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVR
Sbjct: 962 IKRYKGEDISKYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVR 1021
Query: 891 GEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDKREKIEIIPVERIDEVLEVAL 950
GEVLPVGGVTPKIEAAIEAGIK VIIPK+NEKDVFLSPDKR+KI+IIPVERIDEVLEVAL
Sbjct: 1022 GEVLPVGGVTPKIEAAIEAGIKTVIIPKSNEKDVFLSPDKRKKIKIIPVERIDEVLEVAL 1081
Query: 951 VESEKKKELIKRIRETLPLGVSESAGSETLHEHGRDSGSALSVEESKA 998
VESEKK+ELIKR+RE+LPL + E+ ETLHEH G+ L +EESKA
Sbjct: 1082 VESEKKRELIKRVRESLPLWMEETPSGETLHEH--KGGATLPLEESKA 1127
>pir||H69204 endopeptidase La homolog (EC 3.4.21.-) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621875|gb|AAB85287.1| (AE000856) ATP-dependent
protease LA [Methanobacterium thermoautotrophicum]
Length = 644
Score = 577 bits (1470), Expect = e-163
Identities = 289/412 (70%), Positives = 352/412 (85%), Gaps = 1/412 (0%)
Query: 554 SGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSS 613
SGGLGTPAH RVE GMIH+A+KGVL+IDEI T+ +K QQ LLTAMQEK++ ITGQSE SS
Sbjct: 219 SGGLGTPAHERVEAGMIHKANKGVLYIDEIGTMKMKTQQELLTAMQEKRYSITGQSETSS 278
Query: 614 GAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQ 673
GAMVR++ VPCDF+LVA+GNL +E MHPALRSRIRGYGYEV+M+ TMPDT ENR KLVQ
Sbjct: 279 GAMVRSQAVPCDFVLVASGNLQVLEGMHPALRSRIRGYGYEVFMKDTMPDTPENRDKLVQ 338
Query: 674 FVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGK 733
FVAQEV+KDGRIPHF+R+AVEEIIREAQRRAG+K LTL+LR+LGG+VRAAGDIA +G
Sbjct: 339 FVAQEVEKDGRIPHFSREAVEEIIREAQRRAGKKDSLTLKLRELGGLVRAAGDIAKSRGA 398
Query: 734 KYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVL 793
+ V EDV+EA ++++ LE+Q+AD YI +KK+Y V ++EGGE+GRVNGLAIIG++SGI+L
Sbjct: 399 ELVETEDVIEAKKLSRTLEQQIADRYIVQKKKYSVFKSEGGEVGRVNGLAIIGDRSGIIL 458
Query: 794 PIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDISRYDIHVQFLQTYE 853
PI A APA SKEEG+II TGKLGEIAREAV NVSA+IK+Y G DIS YDIH+QFLQ Y+
Sbjct: 459 PIAAEAAPAQSKEEGRIIATGKLGEIAREAVQNVSALIKKYTGTDISNYDIHIQFLQAYD 518
Query: 854 GVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKK 913
GVEGDSAS+SVATAVISALEEIPV Q VA+TGSLS+RG+VLPVGGVT KIEAA EAGI+K
Sbjct: 519 GVEGDSASVSVATAVISALEEIPVDQSVALTGSLSIRGDVLPVGGVTGKIEAAAEAGIRK 578
Query: 914 VIIPKANEKDVFLSPDKREKIEIIPVERIDEVLEVALVESEKKKELIKRIRE 965
V+IP +N DV + + +EI+PVE + +VLE AL+ + K+ LI+R+++
Sbjct: 579 VLIPASNMGDVMIEKKYEDMVEIVPVETLGDVLEHALI-GKGKESLIQRMQK 629
Score = 217 bits (546), Expect = 6e-55
Identities = 112/195 (57%), Positives = 139/195 (70%), Gaps = 6/195 (3%)
Query: 27 IEFETTEEIPVPERLIDQVIGQDHAVEVIKTAAKQRRHVLLIGEPGTGKSMLGQAMAELL 86
+ +ET+++I VPERLIDQ+IGQ+ AVE IK AA+QRR+VLLIGEPG GKSML +AMAELL
Sbjct: 29 LSYETSKDIEVPERLIDQIIGQEEAVETIKKAAEQRRNVLLIGEPGVGKSMLAKAMAELL 88
Query: 87 PTEDLEDILVFPNPEDENMPRIKTVPAGQGRRIVEEYKRKAKEQ-ENIRFYLLFFVFFIV 145
P E L+DILV+PN ED N P I VPAG+GR+IV +K KA+ Q E +++ + FI+
Sbjct: 89 PREQLQDILVYPNIEDPNNPLIGAVPAGEGRKIVMNHKNKARSQDEKKNLFMMLIISFIL 148
Query: 146 AMAVFMSRGDPNTLLLGVFVILIALMVTANMRFRTQAMVPKLLVDNSGRKRAPFVDATGA 205
+ M N L + I + R RT MVPKLLV+N GR+ APFVDATGA
Sbjct: 149 VLGFMM-----NQFLAAIIAAGIIFLALQQFRPRTTVMVPKLLVNNEGRQVAPFVDATGA 203
Query: 206 HAGALLGDVRHDPFQ 220
HAGALLGDVRHDP+Q
Sbjct: 204 HAGALLGDVRHDPYQ 218
>gi|11497976 ATP-dependent protease La (lon) [Archaeoglobus fulgidus]
>gi|7428237|pir||D69295 endopeptidase La homolog (EC
3.4.21.-) - Archaeoglobus fulgidus
>gi|2650266|gb|AAB90868.1| (AE001079) ATP-dependent
protease La (lon) [Archaeoglobus fulgidus]
Length = 621
Score = 571 bits (1456), Expect = e-161
Identities = 291/412 (70%), Positives = 342/412 (82%)
Query: 554 SGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSS 613
SGGL TPAH RVE G IHRAHKGVL+IDEI TL+++ QQ LLTA+Q+KKFPITGQSE SS
Sbjct: 204 SGGLETPAHERVEAGAIHRAHKGVLYIDEINTLTIESQQKLLTALQDKKFPITGQSERSS 263
Query: 614 GAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQ 673
GAMVRTEPVPCDFILVAAGNLD + MHPALRSRI GYGYEVYM TMPDT ENR+KLV+
Sbjct: 264 GAMVRTEPVPCDFILVAAGNLDALMGMHPALRSRIEGYGYEVYMNDTMPDTPENRQKLVR 323
Query: 674 FVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGK 733
FVAQEV KDG+IPHF + AV EII+EA+RRAGR+ HLTLRLR+LGG+VR AGDIA +G
Sbjct: 324 FVAQEVVKDGKIPHFDKYAVAEIIKEARRRAGRRNHLTLRLRELGGLVRTAGDIAKSEGS 383
Query: 734 KYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVL 793
V E VL+A ++AK +E+QLAD YIER+K+Y++ TEG E+GRVNGLA+IGE +GIVL
Sbjct: 384 DIVRLEHVLKAKKIAKTIEEQLADKYIERRKDYKLFITEGYEVGRVNGLAVIGESAGIVL 443
Query: 794 PIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDISRYDIHVQFLQTYE 853
PI A V P+ SK EG++I TG+L EIAREAV+NVSAIIK+Y G DIS D+H+QF+ TYE
Sbjct: 444 PIIAEVTPSMSKSEGRVIATGRLQEIAREAVMNVSAIIKKYTGRDISNMDVHIQFVGTYE 503
Query: 854 GVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKK 913
GVEGDSASIS+ATAVISA+E IPV Q VAMTGSLSV+GEVLPVGGVT KIEAAI+AG+KK
Sbjct: 504 GVEGDSASISIATAVISAIEGIPVDQSVAMTGSLSVKGEVLPVGGVTQKIEAAIQAGLKK 563
Query: 914 VIIPKANEKDVFLSPDKREKIEIIPVERIDEVLEVALVESEKKKELIKRIRE 965
VIIPK N DV L + KIE+IPV RI+EVLE L + +KK L+ + +E
Sbjct: 564 VIIPKDNIDDVLLDAEHEGKIEVIPVSRINEVLEHVLEDGKKKNRLMSKFKE 615
Score = 233 bits (589), Expect = 6e-60
Identities = 118/205 (57%), Positives = 152/205 (73%), Gaps = 4/205 (1%)
Query: 18 MGEERMDL--GIEFETTEEIPVPERLIDQVIGQDHAVEVIKTAAKQRRHVLLIGEPGTGK 75
M EE ++ G++FE+T+++ VPERLIDQVIGQDHAVE IK AA Q+RHV+LIG PGTGK
Sbjct: 1 MNEEVREILGGLDFESTKDVAVPERLIDQVIGQDHAVEAIKKAAVQKRHVMLIGSPGTGK 60
Query: 76 SMLGQAMAELLPTEDLEDILVFPNPEDENMPRIKTVPAGQGRRIVEEYKRKAKEQENIRF 135
SML +AMAELLP E+LEDILV+PNP+D N P+I+ VPAG+GR IVE YK +A ++ R
Sbjct: 61 SMLAKAMAELLPKEELEDILVYPNPQDPNQPKIRLVPAGKGREIVEAYKEEAMKKAQARN 120
Query: 136 YLLFFVFFIVAMAVFMSRGDPNTLLLGVFVILIALMVTANMRFRTQAMVPKLLVDNSGRK 195
+L+F + F+V ++ +P L+ G+ ++ LM++ R VPKLLVDNS +
Sbjct: 121 FLIFTLVFLVIGYTVLT--NPGNLIWGIIAAVLILMMSRYFIPREDRNVPKLLVDNSDKV 178
Query: 196 RAPFVDATGAHAGALLGDVRHDPFQ 220
APF DATGAHAGAL GDVRHDPFQ
Sbjct: 179 TAPFEDATGAHAGALFGDVRHDPFQ 203
>emb|CAC12209.1| (AL445066) ATP-dependent proteinase La (Lon) related protein
[Thermoplasma acidophilum]
Length = 657
Score = 528 bits (1345), Expect = e-148
Identities = 271/416 (65%), Positives = 327/416 (78%), Gaps = 6/416 (1%)
Query: 554 SGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSS 613
SGGL TPAH RVE G IH+AHKGVLFIDEI L + QQ++LTA+QEKK+PI+GQSE S+
Sbjct: 214 SGGLETPAHERVEAGNIHKAHKGVLFIDEINLLRPEDQQAILTALQEKKYPISGQSERSA 273
Query: 614 GAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQ 673
GAMV+TEPVPCDF+LVAAGN D I MHPALRSRIRGYGYEV + M D ENRRKLVQ
Sbjct: 274 GAMVQTEPVPCDFVLVAAGNYDAIRNMHPALRSRIRGYGYEVVVNDYMDDNDENRRKLVQ 333
Query: 674 FVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGK 733
F+AQEV+KD +IPHF + A+ E+I+EAQ+R+GR+ LTLRLR+LGG+VR AGDIAV + K
Sbjct: 334 FIAQEVEKDKKIPHFDKSAIIEVIKEAQKRSGRRNKLTLRLRELGGLVRVAGDIAVSQKK 393
Query: 734 KYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIG------E 787
VT DV+ A +AKPLE+Q+AD IE KK Y+ RTEG +G VNGLA++G E
Sbjct: 394 TVVTAADVIAAKNLAKPLEQQIADRSIEIKKIYKTFRTEGSVVGMVNGLAVVGADTGMSE 453
Query: 788 QSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDISRYDIHVQ 847
+G+VLPI A V PA K G II TGKLG+IA+EAVLNVSA+ K+ G+DIS DIH+Q
Sbjct: 454 YTGVVLPIVAEVTPAEHKGAGNIIATGKLGDIAKEAVLNVSAVFKKLTGKDISNMDIHIQ 513
Query: 848 FLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAI 907
F+ TYEGVEGDSAS+S+ATAVISA+E IPV Q VAMTGSLSVRG+VLPVGGVT K+EAAI
Sbjct: 514 FVGTYEGVEGDSASVSIATAVISAIENIPVDQSVAMTGSLSVRGDVLPVGGVTAKVEAAI 573
Query: 908 EAGIKKVIIPKANEKDVFLSPDKREKIEIIPVERIDEVLEVALVESEKKKELIKRI 963
EAG+ KVI+P+ N D+ L D KIEIIP + I++VL VALV S +K++L RI
Sbjct: 574 EAGLNKVIVPELNYSDIILDADHVNKIEIIPAKTIEDVLRVALVNSPEKEKLFDRI 629
Score = 209 bits (526), Expect = 1e-52
Identities = 107/199 (53%), Positives = 140/199 (69%), Gaps = 5/199 (2%)
Query: 27 IEFETTEEIPVPERLIDQVIGQDHAVEVIKTAAKQRRHVLLIGEPGTGKSMLGQAMAELL 86
++ ETT++I VP+ L DQVIGQD A E++K AA QRRHV+LIGEPGTGKSML Q+M + L
Sbjct: 15 LDIETTKDIHVPKLLFDQVIGQDQAGEIVKKAALQRRHVILIGEPGTGKSMLAQSMVDFL 74
Query: 87 PTEDLEDILVFPNPEDENMPRIKTVPAGQGRRIVEEYKRKAKEQENIRFYLLFFVFFIVA 146
P +LEDILVFPNPED N P+IKTVPAG+G+ IV +Y+ KA+ ++ R + FV F V
Sbjct: 75 PKSELEDILVFPNPEDPNKPKIKTVPAGKGKEIVRQYQIKAEREKRDRSRSIMFVIFSVV 134
Query: 147 MAVFMSRGDPNTLLLGVFVILIALMVTANMRF-----RTQAMVPKLLVDNSGRKRAPFVD 201
+ ++ ++ L F I+ A + M F +AMVPKLLV ++ + PFVD
Sbjct: 135 LLGIIAAIVLRSITLIFFAIMAAAFLYMAMAFNPVIRNERAMVPKLLVSHNPNDKPPFVD 194
Query: 202 ATGAHAGALLGDVRHDPFQ 220
+TGAH+GALLGDVRHDPFQ
Sbjct: 195 STGAHSGALLGDVRHDPFQ 213
>gb|AAG18884.1| (AE004991) lipoate protein ligase; Lon [Halobacterium sp. NRC-1]
Length = 702
Score = 502 bits (1279), Expect = e-141
Identities = 258/427 (60%), Positives = 329/427 (76%), Gaps = 1/427 (0%)
Query: 554 SGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSS 613
SGG+ TP+H RVE G I +A+KGVLFIDEI TL ++ QQ L+TA+QE +F ITGQSE SS
Sbjct: 268 SGGMATPSHERVEAGSIQKANKGVLFIDEINTLDVRSQQKLMTAIQEGEFSITGQSERSS 327
Query: 614 GAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQ 673
GAMV+TE VPCDFI+VAAGN+D +E MHPALRSRI+GYGYEVYM T+ DT + RRK +
Sbjct: 328 GAMVQTEAVPCDFIMVAAGNMDAMENMHPALRSRIKGYGYEVYMDDTIEDTPDMRRKYAR 387
Query: 674 FVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGK 733
FVAQEV+KDG +PHF DA+ E+I EA+RRAGRK LTL+LRDLGG+VR AGDIA +G
Sbjct: 388 FVAQEVEKDGNLPHFAPDAIRELILEAKRRAGRKDSLTLKLRDLGGLVRVAGDIARSEGH 447
Query: 734 KYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVL 793
R DVLEA + ++ +E+Q D YI+R+K+Y++ T +GRVNGLA++G SGI+L
Sbjct: 448 DLTQRSDVLEAKKRSRSIEQQFVDNYIQRRKDYELGTTSEEAVGRVNGLAVMGGDSGIML 507
Query: 794 PIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDISRYDIHVQFLQTYE 853
P+ A + PA S+EEG+I TG+L E+A EAV NVSAIIK++ E++S D H+QF+Q E
Sbjct: 508 PVMAEITPAQSQEEGRIYATGQLKEMAEEAVENVSAIIKKFSDENMSEKDTHIQFVQAGE 567
Query: 854 -GVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIK 912
GV+GDSASI+VATAVISALE+IPV Q++AMTGSLSVRG+VLPVGGVT KIEAA +AG +
Sbjct: 568 GGVDGDSASITVATAVISALEDIPVAQELAMTGSLSVRGDVLPVGGVTHKIEAAAKAGCE 627
Query: 913 KVIIPKANEKDVFLSPDKREKIEIIPVERIDEVLEVALVESEKKKELIKRIRETLPLGVS 972
+VIIPKANE DV + + E+IEIIPV I EVL+VALV +K L+ R++ +
Sbjct: 628 RVIIPKANEDDVMIEDEYEEQIEIIPVTHISEVLDVALVGEPEKDSLVDRLKSITGKALD 687
Query: 973 ESAGSET 979
++ S T
Sbjct: 688 SASDSGT 694
Score = 198 bits (497), Expect = 4e-49
Identities = 98/213 (46%), Positives = 150/213 (70%), Gaps = 5/213 (2%)
Query: 12 LSGEMTMGEERM--DL--GIEFETTEEIPVPERLIDQVIGQDHAVEVIKTAAKQRRHVLL 67
+ G++++ E+ DL G+ + T +I VP+RL+DQVIGQ+ A E++K AAKQ RHV++
Sbjct: 56 VEGDVSIDEDNAEDDLLGGLRIDDTSDITVPDRLVDQVIGQEAAREIVKRAAKQHRHVMM 115
Query: 68 IGEPGTGKSMLGQAMAELLPTEDLEDILVFPNPEDENMPRIKTVPAGQGRRIVEEYKRKA 127
IG PGTGKS+L +AM+ LLP E L+D+LV+ NP+D N P+++TVPAG+G +IV+ +K +A
Sbjct: 116 IGSPGTGKSLLAKAMSRLLPKESLQDVLVYHNPDDSNEPKVRTVPAGKGEQIVDAHKEEA 175
Query: 128 KEQENIRFYLLFFVFFIVAMAVFMSRGDPNTLLLGVFVILIALMVTANMRFRTQAMVPKL 187
+++ +R +L+ ++ ++A+ + P LL + ++ + AMVPKL
Sbjct: 176 RKRNQMRSFLM-WIMILLAVGYALLIATPARPLLALLSAAGIYLLFRYTNRGSDAMVPKL 234
Query: 188 LVDNSGRKRAPFVDATGAHAGALLGDVRHDPFQ 220
L++N+ R+ APF DATGAHAGA+LGDVRHDPFQ
Sbjct: 235 LINNADRQVAPFEDATGAHAGAMLGDVRHDPFQ 267
>pir||H64476 endopeptidase La homolog (EC 3.4.21.-) - Methanococcus jannaschii
>gi|1592066|gb|AAB99427.1| (U67582) ATP-dependent
protease LA, putative (lon) [Methanococcus jannaschii]
Length = 649
Score = 278 bits (703), Expect = 2e-73
Identities = 167/426 (39%), Positives = 252/426 (58%), Gaps = 46/426 (10%)
Query: 557 LGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSSGAM 616
LGTP H R+ G IH AH+G+L++DEI T+ L++Q +LTA+Q+K+ PI+G++ SSGA
Sbjct: 218 LGTPPHKRIILGAIHEAHRGILYVDEIKTMPLEVQDYILTALQDKQLPISGRNPNSSGAT 277
Query: 617 VRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQFVA 676
V T P+PCDFIL+ +GN+D + + L RI Y++ ++ M +T+ENR KL+QF+
Sbjct: 278 VETNPIPCDFILIMSGNMDDVYNLRAPLLDRI---DYKIVLKNKMDNTLENRDKLLQFIV 334
Query: 677 QEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRK----- 731
QE+K + P T D E++R AQ AG K LTLRLR L +++ A D+A+ K
Sbjct: 335 QEIKNNNLNP-MTYDGCCEVVRIAQYLAGSKDKLTLRLRLLANIIKMANDVAMGKDVEEL 393
Query: 732 -------------------GKKYVTREDVLEALQMA-KPLEKQLADWYIERKKEYQ-VIR 770
K Y+T E V + +EKQ+A YI+ K Y+ ++
Sbjct: 394 LGNFDDKGEYHPETQKDKSNKVYITAEHVRKVFDTGIYSMEKQVALNYIKNFKRYKHIVP 453
Query: 771 TEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAI 830
+ ++G + GLA++G GI + IV SK G ++ G+IA+ ++ SA+
Sbjct: 454 NDEPKVGVIYGLAVLG-AGGIGDVTKIIVQILESKNPGTHLLNIS-GDIAKHSITLASAL 511
Query: 831 IKRYKGE----------DISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQD 880
K+ E D++ +I++QF Q+Y ++GDSA+ +V A+ISAL +IP++QD
Sbjct: 512 SKKLVAEKKLPLPKKDIDLNNKEIYIQFSQSYSKIDGDSATAAVCLAIISALLDIPLKQD 571
Query: 881 VAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDKREKIEIIPVE 940
A+TGSL + G VL +GGV KIEAA G K+VIIP+AN DV + E IEIIPV+
Sbjct: 572 FAITGSLDLSGNVLAIGGVNEKIEAAKRYGFKRVIIPEANMIDVI----ETEGIEIIPVK 627
Query: 941 RIDEVL 946
+DE++
Sbjct: 628 TLDEIV 633
Score = 88.9 bits (217), Expect = 2e-16
Identities = 69/218 (31%), Positives = 110/218 (49%), Gaps = 36/218 (16%)
Query: 27 IEFETTEEIPVPE-RLIDQVIGQDHAVEVIKTAAKQRRHVLLIGEPGTGKSMLGQAMAEL 85
I+F+TTEE+P P RLIDQVIGQ+ AV+++ +A K +R+V+L+G+PG GKSM+ +A+ E+
Sbjct: 4 IKFKTTEELPEPSPRLIDQVIGQEEAVKIVLSAVKNKRNVILLGDPGVGKSMIVKAVGEI 63
Query: 86 LPT-EDLEDILVFPNPEDENMPR-IKTVPAGQGRRIVEEYKRKAKEQENIRF------YL 137
L + V P +NM R I V G EYK +K+ + F L
Sbjct: 64 LSDFGEFTPYYVIAKPNLKNMERPIVEVIDG-------EYKEDSKDMPKLDFKAPSSTTL 116
Query: 138 LFFVFFIVAMAVFMSRGDPNTLLLGV------------FVILIALMVTANM-----RFRT 180
L + + ++ ++ + P LL FVI++ ++ A+
Sbjct: 117 LLIMIGAILLSEYLLKYLPQNYLLAAVTITALIVLIFGFVIILTSIMGASRASMPNNLNP 176
Query: 181 QAMVPKLLVDNSGRKRAPFVDATGAHAGALLGDVRHDP 218
+ P LL + K+ P V A+ + LLGD++H P
Sbjct: 177 MDLKPVLLYE---CKKRPLVRASAYNVTRLLGDIKHCP 211
>emb|CAC11246.1| (AL445063) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 493
Score = 208 bits (524), Expect = 2e-52
Identities = 110/207 (53%), Positives = 147/207 (70%), Gaps = 5/207 (2%)
Query: 557 LGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSSGAM 616
LGT + RV G +H AH+GVLFIDEI L +Q+ +LTAMQEK FPITG++ S+GA
Sbjct: 259 LGTLPYERVIAGAVHEAHQGVLFIDEITHLG-NLQRYILTAMQEKTFPITGRNPQSAGAS 317
Query: 617 VRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQFVA 676
VR + VP DFILVAA N++ + + LRSRI G GYE+ M+TTM DT ENR K +QF++
Sbjct: 318 VRVDKVPADFILVAACNINDLPYILSPLRSRIVGNGYEILMKTTMKDTDENRMKYLQFIS 377
Query: 677 QEVKKDGRIPHFTRDAVEEIIREAQRRA----GRKGHLTLRLRDLGGVVRAAGDIAVRKG 732
QE+ DG+IPH T +A E II E ++RA + LTLRLR+LGG++RAAGDIAV KG
Sbjct: 378 QEITMDGKIPHMTMEAAELIIEEGKKRARIIDKKNNELTLRLRELGGLIRAAGDIAVFKG 437
Query: 733 KKYVTREDVLEALQMAKPLEKQLADWY 759
K + +EDV EA+++ P+E+++ Y
Sbjct: 438 NKLIEKEDVEEAIKLYVPVEEKITKEY 464
Score = 74.5 bits (180), Expect = 5e-12
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 18 MGEERMDLGIEFETTEEIPVPERLIDQVIGQDHAVEVIKTAAKQRRHVLLIGEPGTGKSM 77
MG +D E+ T I +P +D+VIGQD AV++ AAKQRRH+LL+G PG GKSM
Sbjct: 1 MGTFFVDFYNEYPDTSYIKIPTNPLDRVIGQDDAVKIAMVAAKQRRHLLLVGPPGVGKSM 60
Query: 78 LGQAMAELLPTEDLEDILVFPNPEDENMPRIK 109
+ QAM+ + E+I V NP+ P ++
Sbjct: 61 IAQAMSFYI-DRPTEEIRVVHNPQYPERPFVE 91
>pir||C69219 endopeptidase La-related protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621987|gb|AAB85390.1| (AE000865) ATP-dependent
protease LA related protein [Methanobacterium
thermoautotrophicum]
Length = 501
Score = 196 bits (493), Expect = 1e-48
Identities = 107/215 (49%), Positives = 144/215 (66%), Gaps = 9/215 (4%)
Query: 557 LGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSSGAM 616
LG+ + RV PG IH AH+GVLFIDEI ++ +Q+ + +AMQ+K FPI G++ S+G+
Sbjct: 264 LGSQPYERVVPGAIHEAHEGVLFIDEIVHIA-GLQRFIFSAMQDKTFPIVGRNPQSAGSS 322
Query: 617 VRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQFVA 676
V+ + VPCDFI V A N+ ++ + P LRSRI+G GYE+ + TTMPDT ENR K+ QFVA
Sbjct: 323 VKVDEVPCDFIFVGACNIADLQYILPPLRSRIQGEGYELLLNTTMPDTDENRAKIAQFVA 382
Query: 677 QEVKKDGRIPHFTRDAVEEIIREAQRRAGR----KGHLTLRLRDLGGVVRAAGDIAVRKG 732
QE++ DG+IPH AVE +I EA+RRA LTLRLRDLGGVVR AGD+AV G
Sbjct: 383 QEIELDGKIPHARAAAVELLIEEARRRARAVDDVDNALTLRLRDLGGVVRMAGDLAVMDG 442
Query: 733 KKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQ 767
Y+ + A++ A +E Q+ I R K Y+
Sbjct: 443 SPYIETRHMEVAIRKAVSVEDQI----IRRYKSYE 473
Score = 76.5 bits (185), Expect = 1e-12
Identities = 38/82 (46%), Positives = 56/82 (67%), Gaps = 1/82 (1%)
Query: 28 EFETTEEIPVPERLIDQVIGQDHAVEVIKTAAKQRRHVLLIGEPGTGKSMLGQAMAELLP 87
+ TTE++ +PE +++VIG + + +IK AAKQRRH+LL+G PG GKS+L QA++ LP
Sbjct: 12 DINTTEDVKIPEDPLERVIGHEDVMPMIKIAAKQRRHLLLVGPPGIGKSLLAQAISFHLP 71
Query: 88 TEDLEDILVFPNPEDENMPRIK 109
E E+I V NPE P ++
Sbjct: 72 -EPSEEITVVHNPERPERPFVE 92
>pir||F72202 hypothetical protein TM1869 - Thermotoga maritima (strain MSB8)
>gi|4982454|gb|AAD36931.1|AE001823_13 (AE001823)
ATP-dependent protease LA, putative [Thermotoga
maritima]
Length = 794
Score = 155 bits (388), Expect = 2e-36
Identities = 126/445 (28%), Positives = 214/445 (47%), Gaps = 35/445 (7%)
Query: 533 VTYNLTTEKGNLLANGLFVKNSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQ- 591
V Y NL + G L T + + PG +H+A+ G L ++ LS
Sbjct: 309 VIYETNPTYSNLFGKIEYYVRGGFLHTDFSM-IRPGSVHKANGGFLIVEAERLLSQPYAW 367
Query: 592 QSLLTAMQEKKFPITGQSE---LSSGAMVRTEPVPCDFILVAAGN---LDTIEKMHPALR 645
+L + E + + +SS ++ E +P D +V G + + ++ P R
Sbjct: 368 YNLKRVLMESQISVENLEHTLGVSSTITLKPEKIPLDLKVVIIGTPYLYELLYELDPDFR 427
Query: 646 SRIRGYGYEVYMRTTMPDTVENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAG 705
R + +P N +K V F++ V ++ +PHF R AV+ +I A R AG
Sbjct: 428 KLFR---IKAEFDWEIPRNELNVQKYVSFISS-VCREKNLPHFDRGAVKRVIWYAMRNAG 483
Query: 706 RKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKE 765
L+ D+ ++ +G++A +G + T + VL+A Q + L + Y E K
Sbjct: 484 NSTKLSAVFGDIVNLIVESGELARLEGSEVTTSDHVLKAYQAMENRRNLLEEKYDEMIKT 543
Query: 766 YQV-IRTEGGEIGRVNGLAII--GEQS-GIVLPIEAIV---APAASKEEGKIIVTGKLGE 818
+ + I G ++G++NGL ++ G+ S G+ + I A V P + + ++GK
Sbjct: 544 FDLMIEVTGSKVGQINGLTVLDLGDHSFGVPVKITAKVYLGRPGVVDIQREADLSGK--- 600
Query: 819 IAREAVLNVSAII-KRYKGEDISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPV 877
I +AVL + + RY + + F Q Y VEGDSAS++ A A++SA+ ++P+
Sbjct: 601 IHSKAVLILEGFLGSRYAQDFPLSVSASISFEQVYSEVEGDSASLAEALALLSAISKVPI 660
Query: 878 RQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEA-------GIKKVIIPKANEKDVFLSPD- 929
+Q +A+TGS++ GEV PVGG+ K+E A G + VIIPKAN K++ L +
Sbjct: 661 KQGIAVTGSINQHGEVQPVGGIVEKVEGFYRACKTRGFDGEQGVIIPKANAKNLVLKDEI 720
Query: 930 ----KREKIEIIPVERIDEVLEVAL 950
K+ I VE ID+ +E+ +
Sbjct: 721 IQAMKKGLFHIWTVETIDDAIEIVM 745
>dbj|BAB06770.1| (AP001517) ATP-dependent proteinase La [Bacillus halodurans]
Length = 556
Score = 151 bits (377), Expect = 4e-35
Identities = 127/433 (29%), Positives = 204/433 (46%), Gaps = 70/433 (16%)
Query: 552 KNSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSEL 611
+ +G +G + + G + +AH G+LFIDEI L LL ++++K +
Sbjct: 157 QGAGAMGQAGIPQPKQGAVTKAHGGMLFIDEIGELHSIQINKLLKVLEDRKVFLESAYYS 216
Query: 612 SSGAMVRTE-------PVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTTMPDT 664
+ +P DF LV A E++ PA+RSR EVY R+
Sbjct: 217 EENQQIPRHIHEIFQRGLPADFRLVGA-TTRMPEEIPPAIRSRC----LEVYFRSL---- 267
Query: 665 VENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAA 724
R ++V + V + G EE + E G T+ +V+ A
Sbjct: 268 --KREEIVTIAKKAVNRLGF-------KAEEGVYEKISAYATNGRETVN------IVQIA 312
Query: 725 GDIAVRKGKKYVTREDV---LEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNG 781
+A +G+ VT DV + + Q++ E+Q+ ++G VNG
Sbjct: 313 AGMATTEGRHEVTVADVEWVIHSSQLSPRPERQIPS---------------EPKVGLVNG 357
Query: 782 LAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGE--------------IAREAVLNV 827
LA+ G +G +L +E V P+ + EG + +TG E +A+ +V NV
Sbjct: 358 LAVFGPNTGALLEVEVDVIPSVA--EGSVTITGIAEEEQTGNQARSIRRKSMAKGSVENV 415
Query: 828 SAIIKRYKGEDISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSL 887
++K+ I +YDIH+ F V+G SA +++AT + SA++E V VAMTG +
Sbjct: 416 LTVLKKMD-LPIDQYDIHINF-PGGAPVDGPSAGVAIATGIYSAIKEEKVDNTVAMTGEI 473
Query: 888 SVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDKREKIEIIPVERIDEVLE 947
S+ G V PVGG+ K+EAA +G K V+IPK NE+ + + E I IIP++ +D+VL
Sbjct: 474 SIHGTVKPVGGIVAKVEAAKASGAKTVLIPKENEQAIL---QEIEGITIIPMKHLDDVLS 530
Query: 948 VALVESEKKKELI 960
AL+ E ++E I
Sbjct: 531 YALIREETEEETI 543
>sp|P42425|LON2_BACSU ATP-DEPENDENT PROTEASE LA HOMOLOG >gi|7428240|pir||G69652
endopeptidase La homolog (EC 3.4.21.-)lonB - Bacillus
subtilis >gi|1142617|gb|AAA84744.1| (U18229) Lon-like
protease [Bacillus subtilis] >gi|1770077|emb|CAA99539.1|
(Z75208) ATP-dependent Lon protease [Bacillus subtilis]
>gi|2635286|emb|CAB14781.1| (Z99118) Lon-like
ATP-dependent protease [Bacillus subtilis]
Length = 552
Score = 140 bits (350), Expect = 6e-32
Identities = 127/425 (29%), Positives = 197/425 (45%), Gaps = 72/425 (16%)
Query: 552 KNSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSEL 611
+ +G +G + + G + AH GVLFIDEI L +L ++++K +
Sbjct: 157 QGAGAMGQAGIPQPKQGAVTHAHGGVLFIDEIGELHPIQMNKMLKVLEDRKVFLDSAYYS 216
Query: 612 SSGAMVRTE-------PVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTTMPDT 664
+ +P DF L+ A E + PA+RSR EV+ R D
Sbjct: 217 EENTQIPNHIHDIFQNGLPADFRLIGATTRMPNE-IPPAIRSRC----LEVFFRELEKDE 271
Query: 665 VENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAA 724
++ K A +++K+ I D + R R+ +++ A
Sbjct: 272 LKTVAKTA---ADKIEKN--ISEEGLDLLTSYTRNG--------------REAVNMIQIA 312
Query: 725 GDIAVRKGKKYVTREDVLEALQMAKPLEKQLADWYIERK----KEYQVIRTEGGEIGRVN 780
+AV + +K +T ED+ +W I K Q I E ++G VN
Sbjct: 313 AGMAVTENRKDITIEDI---------------EWVIHSSQLTPKHEQKIGVEP-QVGIVN 356
Query: 781 GLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGE--------------IAREAVLN 826
GLA+ G SG +L IE V+ A++++G I +TG E +A+ +V N
Sbjct: 357 GLAVYGPNSGSLLEIE--VSVTAAQDKGSINITGIAEEESIGSQSKSIRRKSMAKGSVEN 414
Query: 827 VSAIIKRYKGEDISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGS 886
V ++ R G S YDIH+ F ++G SA I++A + SA+ +IP+ VAMTG
Sbjct: 415 VLTVL-RTMGMKPSDYDIHINFPGGIP-IDGPSAGIAMAAGIFSAIHKIPIDNTVAMTGE 472
Query: 887 LSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDKREKIEIIPVERIDEVL 946
+S+ G V P+GGV PKI+AA ++G KKVIIP N++ + D IEII V+ EVL
Sbjct: 473 ISLNGLVKPIGGVIPKIKAAKQSGAKKVIIPYENQQAILKQID---GIEIIAVKTFQEVL 529
Query: 947 EVALV 951
+ LV
Sbjct: 530 DEILV 534
>sp|O52605|LON_BRUAB ATP-DEPENDENT PROTEASE LA >gi|2801672|gb|AAB97420.1| (AF042348)
ATP-dependent serine protease [Brucella abortus]
Length = 812
Score = 136 bits (340), Expect = 9e-31
Identities = 100/301 (33%), Positives = 156/301 (51%), Gaps = 31/301 (10%)
Query: 689 TRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALQMA 748
T DA+ +IR R AG VR+ + +K VT E + +
Sbjct: 535 TEDALRNVIRHYTREAG---------------VRSLEREVMTLARKAVT-EILKTKKKSV 578
Query: 749 KPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEG 808
K +K L+D+ K + I E ++G V GLA E G +L IE ++ P +G
Sbjct: 579 KITDKNLSDYLGVEKFRFGQIDGED-QVGVVTGLAWT-EVGGELLTIEGVMMPG----KG 632
Query: 809 KIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS-------RYDIHVQFLQTYEGVEGDSAS 861
++ VTG L ++ +E++ + +A R + D + DIHV + +G SA
Sbjct: 633 RMTVTGNLRDVMKESI-SAAASYVRSRAIDFGIEPPLFDKRDIHVHVPEGATPKDGPSAG 691
Query: 862 ISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANE 921
I++ TA++S L IPVR+D+AMTG +++RG VLP+GG+ K+ A + GIKKV+IP+ N
Sbjct: 692 IAMVTAIVSVLTGIPVRKDIAMTGEVTLRGRVLPIGGLKEKLLATLRGGIKKVLIPEENA 751
Query: 922 KDVFLSPDK-REKIEIIPVERIDEVLEVALVESEKKKELIKRIRETLPLGVSESAGSETL 980
KD+ PD + +EI+PV R+ EVL+ ALV + E ++ T V + AG+
Sbjct: 752 KDLAEIPDNVKNNLEIVPVSRVGEVLKHALVRQPEPIEWTEQENPTAVPPVEDEAGASLA 811
Query: 981 H 981
H
Sbjct: 812 H 812
>sp|P36773|LON1_MYXXA ATP-DEPENDENT PROTEASE LA 1 >gi|540928|pir||A49844 endopeptidase La
(EC 3.4.21.53) 1 - Myxococcus xanthus
>gi|303712|dbj|BAA02307.1| (D12923) ATP-dependent
protease La [Myxococcus xanthus]
>gi|4838466|gb|AAD31005.1|AF127082_4 (AF127082)
ATP-dependent protease LonV [Myxococcus xanthus]
Length = 817
Score = 136 bits (338), Expect = 2e-30
Identities = 107/319 (33%), Positives = 168/319 (52%), Gaps = 37/319 (11%)
Query: 647 RIRGYGYEVYMRTTMPDTVENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGR 706
RI GY T P+ + R+ + + +E + +G + D + +R R R
Sbjct: 502 RIAGY--------TEPEKLSIARRYL--IPKEQEANG-LSDLKVDISDPALRTIIHRYTR 550
Query: 707 KGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEY 766
+ + R++GGV R ++ GK+ + + + + P + Y
Sbjct: 551 ESGVRSLEREIGGVFRKIARDVLKNGKRDIDVDRKMAMKFLGTP------------RYRY 598
Query: 767 QVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIARE-AVL 825
+ E ++G V GLA E G +L EA + P +GK+I+TGKLGE+ +E A
Sbjct: 599 GMAEAED-QVGIVTGLAWT-ELGGEILTTEATIMPG----KGKLIITGKLGEVMQESAQA 652
Query: 826 NVSAIIKRYKGEDISR-----YDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQD 880
+S + R + I R YDIHV + +G SA +++ TA++SAL + +R+D
Sbjct: 653 AMSYVRSRAERFGIDRKVFENYDIHVHLPEGAIPKDGPSAGVTICTALVSALTRVLIRRD 712
Query: 881 VAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPV 939
VAMTG +++RG VLP+GG+ K AA AGIK V+IPKAN+KD+ P K R+++ I+PV
Sbjct: 713 VAMTGEITLRGRVLPIGGLKEKTLAAHRAGIKTVLIPKANKKDLKDIPLKIRKQLRIVPV 772
Query: 940 ERIDEVLEVALVESEKKKE 958
E +D+VL ALV EK +E
Sbjct: 773 EFVDDVLREALV-LEKPEE 790
>emb|CAA12120.1| (AJ224767) Lon-protease [Acinetobacter sp. ADP1]
Length = 795
Score = 130 bits (324), Expect = 7e-29
Identities = 101/314 (32%), Positives = 157/314 (49%), Gaps = 27/314 (8%)
Query: 664 TVENRRKLV-QFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVR 722
T E + K+ +++ + KD + EE IR+ RR R+ + R++ + R
Sbjct: 493 TEEEKVKIADRYLVPKAIKDNGLRSSELTVHEEAIRDIVRRYTREAGVRSLEREVSKIAR 552
Query: 723 AAGDIAVRKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGL 782
AV K K + + E L Y+ K I E ++GRVNGL
Sbjct: 553 KVVKEAVSKKSKNLHIDVTQETLPE-----------YLGPHKFDFGIAEEEAQVGRVNGL 601
Query: 783 AIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGE---DI 839
A G +L IE AA K +GK I TG LG++ +E++ +++ E +
Sbjct: 602 AWTSV-GGELLTIEV----AAVKGKGKFITTGSLGDVMKESITAAMTVVRTRADELGIEA 656
Query: 840 SRY---DIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPV 896
SR+ D+HV + +G SA +++ TA++SA IP+R D+AMTG S+RG L +
Sbjct: 657 SRFEETDVHVHLPEGATPKDGPSAGLALTTALVSAFTGIPIRADIAMTGETSLRGNALRI 716
Query: 897 GGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLEVALVESEK 955
GG+ K+ AA GIK V IP+ N +D+ PD +E +EI V+ IDE+L +AL E K
Sbjct: 717 GGLKEKLLAAHRGGIKLVFIPQDNVRDLAEIPDNVKEGLEIKAVKSIDEILPLALTEQPK 776
Query: 956 ---KKELIKRIRET 966
K ++K + E+
Sbjct: 777 PLAKAPIVKPVEES 790
>sp|P37945|LON1_BACSU ATP-DEPENDENT PROTEASE LA 1 >gi|2118118|pir||I40421 endopeptidase
La (EC 3.4.21.53) - Bacillus subtilis
>gi|496557|emb|CAA53984.1| (X76424) protease La
[Bacillus subtilis] >gi|1770078|emb|CAA99540.1| (Z75208)
ATP-dependent Lon protease [Bacillus subtilis]
>gi|2635285|emb|CAB14780.1| (Z99118) class III
heat-shock ATP-dependent Lon protease [Bacillus
subtilis]
Length = 774
Score = 128 bits (318), Expect = 3e-28
Identities = 120/387 (31%), Positives = 177/387 (45%), Gaps = 37/387 (9%)
Query: 577 VLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDT 636
V +DEI +S + +AM E P S S + T + + A NL T
Sbjct: 417 VFLLDEIDKMSSDFRGDPSSAMLEVLDP-EQNSSFSDHYIEETFDLSKVLFIATANNLAT 475
Query: 637 IEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQFVAQEVKKDGRIPHFTRDAVEEI 696
I LR R+ Y + V++ Q +KK A+ +I
Sbjct: 476 IPG---PLRDRMEIINIAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNL--QLRDQAILDI 530
Query: 697 IREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALQMAKPLEKQLA 756
IR R AG + R L + R A V + +K +T EK L
Sbjct: 531 IRYYTREAGVRS----LERQLAAICRKAAKAIVAEERKRIT------------VTEKNLQ 574
Query: 757 DWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKL 816
D+ +R Y TE ++G V GLA G L IE ++P +GK+I+TGKL
Sbjct: 575 DFIGKRIFRYGQAETED-QVGVVTGLAYT-TVGGDTLSIEVSLSPG----KGKLILTGKL 628
Query: 817 GEIAREAVLNVSAIIKRYKGEDIS-------RYDIHVQFLQTYEGVEGDSASISVATAVI 869
G++ RE+ + + R K E++ +YDIH+ + +G SA I++ATA++
Sbjct: 629 GDVMRESAQAAFSYV-RSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPSAGITMATALV 687
Query: 870 SALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPD 929
SAL V ++V MTG +++RG VLP+GG+ K A AG+ +I PK NEKD+ P+
Sbjct: 688 SALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPE 747
Query: 930 K-REKIEIIPVERIDEVLEVALVESEK 955
RE + I +DEVLE ALV +K
Sbjct: 748 SVREGLTFILASHLDEVLEHALVGEKK 774
>pir||H81908 probable endopeptidase La (EC 3.4.21.53) NMA1398 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7380058|emb|CAB84639.1| (AL162755) putative
ATP-dependent protease [Neisseria meningitidis Z2491]
Length = 820
Score = 126 bits (314), Expect = 1e-27
Identities = 97/270 (35%), Positives = 148/270 (53%), Gaps = 22/270 (8%)
Query: 692 AVEEIIREAQRRAGRKGHLTLRLRDLGGVVR-AAGDIAVRKGKKYV--TREDVLEALQMA 748
AV +IIR R AG + R++ + R I + + KK + T++ +
Sbjct: 530 AVRDIIRYYTREAGVRS----LDREIAKICRKVVMQITLDEDKKRLSETKKTSKAKPKAV 585
Query: 749 KPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEG 808
K EK L D+ R+ +Y V +E IG+V GLA E G +L +EA P +G
Sbjct: 586 KVNEKNLHDYLGVRRFDYGVAESEN-RIGQVTGLAWT-EVGGELLTVEAAALPG----KG 639
Query: 809 KIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS-------RYDIHVQFLQTYEGVEGDSAS 861
I TG+LG++ +E+V +++ R + E + + DIHV + +G SA
Sbjct: 640 VIQCTGQLGDVMKESVSAAWSVV-RSRAESVGLASDFYEKKDIHVHVPEGATPKDGPSAG 698
Query: 862 ISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANE 921
I++ A++SA +IPVR DVAMTG +++RGEVLP+GG+ K+ AA+ GIK V+IPK N
Sbjct: 699 IAMTLAMVSAFSKIPVRADVAMTGEITLRGEVLPIGGLKEKLLAALRGGIKHVLIPKDNF 758
Query: 922 KDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
KD+ P+ + + I PV+ IDEVL + L
Sbjct: 759 KDLEEIPENVKTGLTIHPVKWIDEVLALGL 788
>pir||H81106 ATP-dependent proteinase La NMB1231 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7226470|gb|AAF41612.1| (AE002471) ATP-dependent
protease La [Neisseria meningitidis MC58]
Length = 820
Score = 126 bits (313), Expect = 1e-27
Identities = 98/281 (34%), Positives = 151/281 (52%), Gaps = 23/281 (8%)
Query: 681 KDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVR-AAGDIAVRKGKKYV--T 737
K+G + AV +IIR R AG + R++ + R I + + KK + T
Sbjct: 520 KEGELA-IEESAVRDIIRYYTREAGVRS----LDREIAKICRKVVMQITLDEDKKRLSET 574
Query: 738 REDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEA 797
++ + K EK L D+ R+ +Y V +E IG+V GLA E G +L +EA
Sbjct: 575 KKTSKAKPKAVKVNEKNLHDYLGVRRFDYGVAESEN-RIGQVTGLAWT-EVGGELLTVEA 632
Query: 798 IVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS-------RYDIHVQFLQ 850
P +G I TG+LG++ +E+V +++ R + E + + DIH+ +
Sbjct: 633 AALPG----KGVIQCTGQLGDVMKESVSAAWSVV-RSRAESVGLAPDFYEKKDIHIHVPE 687
Query: 851 TYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAG 910
+G SA I++ A +SA +IPVR DVAMTG +++RGEVLP+GG+ K+ AA+ G
Sbjct: 688 GATPKDGPSAGIAMTLAAVSAFTKIPVRADVAMTGEITLRGEVLPIGGLKEKLLAALRGG 747
Query: 911 IKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
IK V+IPK N KD+ P+ + + I PV+ IDEVL + L
Sbjct: 748 IKHVLIPKDNVKDLEEIPENVKTGLTIHPVKWIDEVLALGL 788
>gb|AAF65564.1|AF250140_1 (AF250140) protease Lon [Pseudomonas fluorescens]
Length = 798
Score = 125 bits (311), Expect = 2e-27
Identities = 94/270 (34%), Positives = 142/270 (51%), Gaps = 29/270 (10%)
Query: 688 FTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALQM 747
F DA+ +IIR R AG +G R + V R A +E +E
Sbjct: 519 FEPDAIRDIIRYYTREAGVRG----LERQIAKVCRKA------------VKEHAMEKRFS 562
Query: 748 AKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEE 807
K L + RK Y + + +IG+V GLA + G +L IEA V P +
Sbjct: 563 VKVTSDLLEHFLGVRKFRYGLAEQQD-QIGQVTGLAWT-QVGGELLTIEAAVVPG----K 616
Query: 808 GKIIVTGKLGEIAREAVLNVSAIIK-RYKGEDI-----SRYDIHVQFLQTYEGVEGDSAS 861
G++I TG LG++ E++ +++ R K I + D H+ + +G SA
Sbjct: 617 GQLIKTGSLGDVMVESITAALTVVRSRAKSLGIPLDFHEKRDTHIHMPEGATPKDGPSAG 676
Query: 862 ISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANE 921
+ + TA++SAL IPVR DVAMTG +++RG+VL +GG+ K+ AA GIK VIIP+ N
Sbjct: 677 VGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKTVIIPEENV 736
Query: 922 KDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
+D+ PD ++ ++I PV+ IDEVL++AL
Sbjct: 737 RDLKEIPDNIKQDLQIKPVKWIDEVLQIAL 766
>gb|AAG29872.1|AF313764_15 (AF313764) partial ATP-dependent protease Lon [Zymomonas mobilis]
Length = 526
Score = 125 bits (311), Expect = 2e-27
Identities = 92/290 (31%), Positives = 153/290 (52%), Gaps = 27/290 (9%)
Query: 684 RIPHFTRDAVEEII------REAQRRAGRKGHLTLR---LRDL-GGVVRAAGDIAVRKGK 733
R+ +T D EI R+ + +KG T+ +RDL R +G A+ +
Sbjct: 209 RLEGYTEDEKIEIATSHLLPRQIKSHGLKKGEFTVETDAIRDLIRYYTRESGVRALEREL 268
Query: 734 KYVTREDVLEALQM-AKPLE---KQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQS 789
+ R+ + L+ AK + K L+D+ R+ ++ + E ++G V GLA E
Sbjct: 269 AKIARKTLRRILEKKAKTITITAKNLSDFSGVRRYKFGISEKED-QVGVVTGLAWT-EVG 326
Query: 790 GIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKR------YKGEDISRYD 843
G +L IE++ P G I TGKLG++ +E++ + +K K +R D
Sbjct: 327 GELLTIESVTVPG----RGNIRTTGKLGDVMKESIQAALSFVKSRAPFYGIKPSIFTRKD 382
Query: 844 IHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKI 903
+H+ + +G SA + + TA+ S L +PVR+DVAMTG +++RG VLP+GG+ K+
Sbjct: 383 VHIHLPEGAVPKDGPSAGMGIVTAITSVLTGVPVRRDVAMTGEVTLRGRVLPIGGLKEKL 442
Query: 904 EAAIEAGIKKVIIPKANEKDVFLSPDKREK-IEIIPVERIDEVLEVALVE 952
AA+ G K V+IP+ N+KD+ P+ +K ++II V +DE L +A+ E
Sbjct: 443 LAALRGGFKTVLIPEVNQKDLIELPENIKKGLKIIAVSHVDEDLALAMTE 492
>pir||G83420 Lon proteinase PA1803 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9947786|gb|AAG05192.1|AE004606_6 (AE004606)
Lon protease [Pseudomonas aeruginosa]
Length = 798
Score = 123 bits (307), Expect = 7e-27
Identities = 92/287 (32%), Positives = 153/287 (53%), Gaps = 25/287 (8%)
Query: 684 RIPHFTRDAVEEII------REAQRRAGRKGHLTLRLRDLGGVVR----AAGDIAVRKGK 733
R+P +T D I ++ Q +KG LT L ++R AG ++ +
Sbjct: 485 RLPGYTEDEKVNIAAKYLIPKQVQANGLKKGELTFEEGALRDIIRYYTREAGVRSLERQI 544
Query: 734 KYVTREDVLEALQMAK---PLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSG 790
V R+ V E ++ + + + + Y+ +K + + +IG+V GLA + G
Sbjct: 545 AKVCRKAVKEHAKLKRIQAVVSSETLENYLGVRKFRYGLAEQQDQIGQVTGLAWT-QVGG 603
Query: 791 IVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIK-RYKGEDIS-----RYDI 844
+L IEA V P +G++ TG LG++ E++ +++ R + I+ + DI
Sbjct: 604 ELLTIEAAVVPG----KGQLTKTGSLGDVMAESITAALTVVRSRAQSLGIAADFHEKRDI 659
Query: 845 HVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIE 904
H+ + +G SA I + TA++SA+ +IPVR DVAMTG +++RG+VL +GG+ K+
Sbjct: 660 HIHVPEGATPKDGPSAGIGMCTALVSAITQIPVRADVAMTGEITLRGQVLAIGGLKEKLL 719
Query: 905 AAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
AA GIK VIIP+ N +D+ PD + + I PV+ IDEVL++AL
Sbjct: 720 AAHRGGIKTVIIPEENVRDLKEIPDNIKSDLVIKPVKWIDEVLQIAL 766
>sp|P77810|LON_AZOBR ATP-DEPENDENT PROTEASE LA >gi|2118119|pir||JC6045 endopeptidase La
(EC 3.4.21.53) - Azospirillum brasilense
>gi|1504124|gb|AAB16819.1| (U35611) ATP-dependent
protease Lon [Azospirillum brasilense]
Length = 810
Score = 123 bits (306), Expect = 9e-27
Identities = 73/183 (39%), Positives = 110/183 (59%), Gaps = 12/183 (6%)
Query: 776 IGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKR-- 833
+G GLA E G +L IEA+ P +G++ TGKLG++ +E+V + +K
Sbjct: 601 VGVTTGLAWT-EVGGELLSIEAVSLPG----KGRVTTTGKLGDVMKESVQAAESYVKSRA 655
Query: 834 ----YKGEDISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSV 889
K + DIHV + +G SA +++ T+++S L I VR+DVAMTG +++
Sbjct: 656 TAFGIKPTLFEKRDIHVHVPEGATPKDGPSAGVAMITSIVSVLTGIAVRKDVAMTGEITL 715
Query: 890 RGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLEV 948
RG VLP+GG+ K+ AA+ G+K V+IPK NEKD+ PD + +EIIPV +D+VL+
Sbjct: 716 RGRVLPIGGLKEKLLAALRGGLKHVLIPKDNEKDLAEIPDNVKRGLEIIPVSTVDDVLKH 775
Query: 949 ALV 951
ALV
Sbjct: 776 ALV 778
>pir||G82141 ATP-dependent LA proteinase VC1920 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9656455|gb|AAF95068.1|
(AE004267) ATP-dependent protease LA [Vibrio cholerae]
Length = 786
Score = 123 bits (306), Expect = 9e-27
Identities = 101/288 (35%), Positives = 155/288 (53%), Gaps = 35/288 (12%)
Query: 675 VAQEVKKDGRIPH---FTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVR-AAGDIAVR 730
V+++V+++G P A+ IIR R AG +G R++ + R A I +
Sbjct: 506 VSKQVERNGLKPSEIVIEDSAIVGIIRYYTREAGVRG----LEREISKICRKAVKKILLD 561
Query: 731 KGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSG 790
KG K V V+ + + L Q D+ K E E IG+VNGLA E G
Sbjct: 562 KGVKTV----VVNQQNLKEFLGVQRFDY---GKAE------ESNRIGQVNGLAWT-EVGG 607
Query: 791 IVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS-------RYD 843
+L IE P +GK+ TG LG++ +E++ ++ R + E + + D
Sbjct: 608 DLLTIETQSMPG----KGKLTQTGSLGDVMQESIQAAMTVV-RSRAEKLGINPDFYEKKD 662
Query: 844 IHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKI 903
IHV + +G SA I++ TA++S+L PV+ +VAMTG +++RGEVLP+GG+ K+
Sbjct: 663 IHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVKAEVAMTGEITLRGEVLPIGGLKEKL 722
Query: 904 EAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
AA GIK V+IPK NE+D+ PD ++++PV+ IDEVL+VAL
Sbjct: 723 LAAHRGGIKTVLIPKDNERDLEEIPDNVIADLQVLPVQWIDEVLKVAL 770
>pir||H82392 ATP-dependent LA-related proteinase VCA0975 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658415|gb|AAF96871.1| (AE004424) ATP-dependent
protease LA-related protein [Vibrio cholerae]
Length = 786
Score = 122 bits (302), Expect = 3e-26
Identities = 107/416 (25%), Positives = 191/416 (45%), Gaps = 44/416 (10%)
Query: 565 VEPGMIHRAHKGVLFIDEIATL-----------SLKMQQSLLTAMQEKKFPITGQSELSS 613
+ PG +H+A+ GVL +D + L +L+ +Q T++ EK+ +TG L
Sbjct: 350 IRPGSLHKANGGVLLMDAVKVLEQPYVWDGLKRALRSRQLSFTSL-EKEVTLTGTVSLDP 408
Query: 614 GAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQ 673
EP+P D ++ G+ T E + + MP ++ +
Sbjct: 409 ------EPIPLDVKIILFGDYRTYELLAHYDPEFSELFRVTADFADEMPRDADSELHYAR 462
Query: 674 FVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGK 733
F++ V D + H R A+ II + R G + L+L + ++R + +A +
Sbjct: 463 FISSIVH-DANMLHCDRKAIARIIEHSSRTTGDQTKLSLHSAHIANLLRESNYVAKQANA 521
Query: 734 KYVTREDVLEALQ----MAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQS 789
+ + V EAL+ L++ + + ++ +I+TEG IG+VN L+++ S
Sbjct: 522 NLIRQIHVEEALRNQELRVNRLQQSMMETFVNGTT---LIQTEGVAIGQVNALSVLAT-S 577
Query: 790 GIVLPIEAIVAPAASKEEGKIIVTGKL----GEIAREAVLNVSAIIKRYKGEDIS-RYDI 844
+ + S EG+II + G I + V+ +SA + G
Sbjct: 578 DHAFGMPNRITATTSYGEGEIIDIERNVDLGGSIHSKGVMILSAYLSSVFGRTARIPLTT 637
Query: 845 HVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIE 904
+ F Q+Y GV+GDSAS++ A++SA + P RQD+A+TGS++ GE P+GG+ KIE
Sbjct: 638 TITFEQSYGGVDGDSASMAEFCAIVSAFSKQPNRQDIAITGSMNQFGESQPIGGLNEKIE 697
Query: 905 AAIEAGIKK-------VIIPKANEKDVFLSPDKREKIE-----IIPVERIDEVLEV 948
+ K VIIP++N ++ L D + +E I ++ + E +E+
Sbjct: 698 GFFDVCTIKGRKDTQGVIIPRSNMHNLMLRADVVKAVEKGEFHIWAIDHVTEAIEI 753
>sp|O66605|LON_AQUAE ATP-DEPENDENT PROTEASE LA >gi|7428227|pir||A70322 endopeptidase La
(EC 3.4.21.53) - Aquifex aeolicus
>gi|2982953|gb|AAC06568.1| (AE000680) Lon protease
[Aquifex aeolicus]
Length = 795
Score = 120 bits (297), Expect = 1e-25
Identities = 137/457 (29%), Positives = 209/457 (44%), Gaps = 83/457 (18%)
Query: 539 TEKGNLLANGL---FVKNS-GGLGTPAHLR--------VEPGMIHRAHKG------VLFI 580
T G +A L FV+ + GG+ A +R PG I +A K V+ +
Sbjct: 377 TSLGRSIAEALGRKFVRIALGGIRDEAEIRGHRRTYVGAMPGRIIQAIKQAGTKNPVIML 436
Query: 581 DEIATLSLKMQQSLLTAMQEKKFPITGQ--SELSSGAMVRTEPVPCDF---ILVAAGN-L 634
DEI L++ Q A+ E P + ++L G +P D I + GN
Sbjct: 437 DEIDKLAISFQGDPAAALLEVLDPEQNKKFTDLYIG-------IPFDLSEVIFICTGNRA 489
Query: 635 DTI-----EKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQFVAQEVKKDGRIPHFT 689
DTI ++M + S GY E + + L F +E++ FT
Sbjct: 490 DTIPTPLLDRMELIMLS---GYSEEEKLFIAKKHLIPKLIPLHGFSPEEIE-------FT 539
Query: 690 RDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVR--AAGDIAVRKGKKYVTREDVLEALQM 747
+A+ EIIR R AG + R + V+R A + KG +T E V + L +
Sbjct: 540 DEAILEIIRGYTREAGVRN----LQRQISAVLRKIAVKKLQGEKGPFNITPELVRKLLGV 595
Query: 748 AKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEE 807
+ Y+ R + +G GLA E G ++ IEA K +
Sbjct: 596 PR----------------YRPEREKKPLVGVATGLAWT-EVGGEIMFIEA----TKMKGK 634
Query: 808 GKIIVTGKLGEIAREAVLNVSAIIKRYKGED-------ISRYDIHVQFLQTYEGVEGDSA 860
G +++TG LG+I +E+ + I R K ED S+ D+HV + +G SA
Sbjct: 635 GSLVLTGSLGDIMKESAQAALSYI-RSKAEDYGIDPDIFSQVDVHVHVPEGAVPKDGPSA 693
Query: 861 SISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKAN 920
+++ATA++S +IPVR DVAMTG +++RG VLPVGG+ KI AA A I +VI+P N
Sbjct: 694 GVAIATALLSLFTDIPVRMDVAMTGEITLRGRVLPVGGLKEKILAAKRAEIYEVILPAKN 753
Query: 921 EKDVF--LSPDKREKIEIIPVERIDEVLEVALVESEK 955
+ +V L REK+ + V+ ++EV ++ALV K
Sbjct: 754 KDEVMEELPEYVREKMTLHFVDNLEEVFKIALVREPK 790
>gb|AAF97782.1|AF247974_1 (AF247974) Lon protease [Thermus thermophilus]
Length = 795
Score = 119 bits (296), Expect = 1e-25
Identities = 96/289 (33%), Positives = 147/289 (50%), Gaps = 37/289 (12%)
Query: 674 FVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRK-- 731
F +E +GR+ T A+E I++E R AG + R+L V R A + K
Sbjct: 514 FQVKEAGLEGRL-EITDRAIERIVQEYTREAGVRN----LDRELSKVARKAAKDYLEKPW 568
Query: 732 -GKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGG-EIGRVNGLAIIGEQS 789
G + V ED+ L + K Y+ R E ++G GLA
Sbjct: 569 EGVRVVDAEDLEAYLGVPK----------------YRPDRAEKEPQVGAAQGLAWT-PYG 611
Query: 790 GIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGE------DISRYD 843
G +L IEA+ P GK+ +TG LGE+ +E+ ++ ++ E YD
Sbjct: 612 GTLLTIEAVAVPGT----GKVNLTGNLGEVMKESAHAALTYLRAHREEWGLPEGFHKDYD 667
Query: 844 IHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKI 903
+H+ + +G SA I++ATA+ SAL PVR D+AMTG +++RG VLP+GGV K+
Sbjct: 668 LHIHVPEGATPKDGPSAGITIATALASALTGRPVRMDIAMTGEITLRGRVLPIGGVKEKL 727
Query: 904 EAAIEAGIKKVIIPKANEKDVFLSPDKREK-IEIIPVERIDEVLEVALV 951
AA +AGI +VI+PK N ++ P++ K +EI VE + EVL++ L+
Sbjct: 728 LAAHQAGIHRVILPKENAAELKEVPEEILKDLEIHFVEEVGEVLKLLLL 776
>sp|P52977|LON_CAUCR ATP-DEPENDENT PROTEASE LA >gi|1667399|gb|AAB18765.1| (U56652) lon
protease [Caulobacter crescentus]
Length = 799
Score = 119 bits (295), Expect = 2e-25
Identities = 92/296 (31%), Positives = 153/296 (51%), Gaps = 43/296 (14%)
Query: 684 RIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRA---AGDIAVRKGKKYVTRED 740
RIP +T D EI K H+ +L G+ A D A+R +Y TRE
Sbjct: 485 RIPGYTEDEKLEIA---------KRHILPKLAKDHGLKPAEFIVPDKAIRDLIRYYTREA 535
Query: 741 VLEALQ-----MAKPLEKQLADWYI-------ERKKEYQVIRT-------EGGEIGRVNG 781
+ +L+ +A+ + LA + ER +Y ++ E ++G V G
Sbjct: 536 GVRSLERELGALARKTVRDLAREKVASITIDDERLAKYAGVKKYRYGETDEVDQVGIVTG 595
Query: 782 LAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKR------YK 835
LA E G +L IEA+ P +G++ +TG L ++ +E++ ++ ++ K
Sbjct: 596 LAWT-EFGGDILTIEAVKMPG----KGRMQITGNLKDVMKESIAAANSYVRSRALQFGIK 650
Query: 836 GEDISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLP 895
+ D+H+ +G SA I++A A++S L IP+R+D+AMTG +++RG V
Sbjct: 651 PPVFEKTDVHIHVPDGATPKDGPSAGIAMALAMVSVLTGIPIRKDIAMTGEITLRGRVTA 710
Query: 896 VGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
+GG+ K+ AA+ +G+K V+IP+ NEKD+ P ++ +EIIPV +DEVL+ AL
Sbjct: 711 IGGLKEKLLAALRSGVKTVLIPQENEKDLADVPQTVKDGLEIIPVSTVDEVLKHAL 766
>gb|AAF05300.1|AF167159_1 (AF167159) Lon protease [Sinorhizobium meliloti]
Length = 806
Score = 119 bits (295), Expect = 2e-25
Identities = 71/185 (38%), Positives = 112/185 (60%), Gaps = 14/185 (7%)
Query: 775 EIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRY 834
++G V GLA E G +L IE ++ P +G++ VTG L ++ +E++ + +A R
Sbjct: 596 QVGVVTGLAWT-EVGGELLTIEGVMMPG----KGRMTVTGNLRDVMKESI-SAAASYVRS 649
Query: 835 KGEDIS-------RYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSL 887
+ D + DIHV + +G SA +++ATA++S + IP+ +DVAMTG +
Sbjct: 650 RAIDFGIEPPLFDKRDIHVHVPEGATPKDGPSAGVAMATAIVSVMTGIPISKDVAMTGEI 709
Query: 888 SVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVL 946
++RG VLP+GG+ K+ AA+ GIKKV+IP+ N KD+ PD + EIIPV R+ EV+
Sbjct: 710 TLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDIADIPDNVKNSFEIIPVSRMGEVI 769
Query: 947 EVALV 951
AL+
Sbjct: 770 AHALL 774
>sp|O69177|LON_RHIME ATP-DEPENDENT PROTEASE LA
Length = 806
Score = 119 bits (295), Expect = 2e-25
Identities = 71/185 (38%), Positives = 113/185 (60%), Gaps = 14/185 (7%)
Query: 775 EIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRY 834
++G V GLA E G +L IE ++ P +G++ VTG L ++ +E++ + +A R
Sbjct: 596 QVGVVTGLAWT-EVGGELLTIEGVMMPG----KGRMTVTGNLRDVMKESI-SAAASYVRS 649
Query: 835 KGEDIS-------RYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSL 887
+ D + DIHV + +G SA +++ATA++S + IP+ +DVAMTG +
Sbjct: 650 RAIDFGIEPPLFDKRDIHVHVPEGATPKDGPSAGVAMATAIVSVMTGIPISKDVAMTGEI 709
Query: 888 SVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVL 946
++RG VLP+GG+ K+ AA+ GIKKV+IP+ N KD+ PD + +EIIPV R+ EV+
Sbjct: 710 TLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLADIPDNVKNSLEIIPVSRMGEVI 769
Query: 947 EVALV 951
AL+
Sbjct: 770 AHALL 774
>sp|P74956|LON_VIBPA ATP-DEPENDENT PROTEASE LA >gi|1655939|gb|AAC44747.1| (U66708) lon
protease [Vibrio parahaemolyticus]
Length = 783
Score = 118 bits (293), Expect = 3e-25
Identities = 96/299 (32%), Positives = 148/299 (49%), Gaps = 37/299 (12%)
Query: 675 VAQEVKKDGRIPH---FTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRK 731
V ++V+++G P+ A+ IIR R AG +G + R I +
Sbjct: 506 VEKQVQRNGLKPNEIVIEDSAIIGIIRYYTREAGVRG-----------LEREISKICRKA 554
Query: 732 GKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGI 791
K + +D+ L++ L + K E IG+V GLA E G
Sbjct: 555 VKNILLDKDIKSVTVTMDNLKEYLGVQRFDYGKA-----DESNRIGQVTGLAWT-EVGGD 608
Query: 792 VLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKR------YKGEDISRYDIH 845
+L IE P +GK+ TG LG++ +E++ +++ + + DIH
Sbjct: 609 LLTIETQSMPG----KGKLTQTGSLGDVMQESIQAAMTVVRSRADKLGINSDFYEKKDIH 664
Query: 846 VQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEA 905
V + +G SA ++ TA++SAL PV+ +VAMTG +++RGEVLP+GG+ K+ A
Sbjct: 665 VHVPEGATPKDGPSAGTAMCTALVSALTGNPVKAEVAMTGEITLRGEVLPIGGLKEKLLA 724
Query: 906 AIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLEVAL------VESEKKK 957
A GIK V+IPK NE+D+ P+ +++IPV IDEVL+VAL VE E KK
Sbjct: 725 AHRGGIKTVLIPKDNERDLEEIPENVIADLQVIPVRWIDEVLKVALERDPTGVEFEAKK 783
>pir||G75331 ATP-dependent proteinase LA - Deinococcus radiodurans (strain R1)
>gi|6459762|gb|AAF11526.1|AE002035_9 (AE002035)
ATP-dependent protease LA [Deinococcus radiodurans]
Length = 813
Score = 118 bits (293), Expect = 3e-25
Identities = 74/191 (38%), Positives = 112/191 (57%), Gaps = 12/191 (6%)
Query: 775 EIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRY 834
++G GLA G +L +EA+ P GK+++TG LG++ +E+V A ++ +
Sbjct: 613 QVGVAQGLAWTSV-GGTMLLVEALATPGT----GKVVMTGSLGDVMKESVGAAIAYLRAH 667
Query: 835 KGE-----DISR-YDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLS 888
E D + DIHV F +G SA I++ATAVISA+ PVR DVAMTG +S
Sbjct: 668 AAEYGADPDFHKTMDIHVHFPDGATPKDGPSAGITIATAVISAVTGRPVRLDVAMTGEIS 727
Query: 889 VRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLE 947
+RG VLP+GG+ K+ AA + GI++VI PK NE + P+ R +++ VE + EVLE
Sbjct: 728 LRGRVLPIGGLKEKLLAAHQGGIREVIFPKDNEPSLQEVPESIRGDLKVHAVEHVSEVLE 787
Query: 948 VALVESEKKKE 958
+ L+ ++ E
Sbjct: 788 LLLLPKPEQAE 798
>pir||A72230 endopeptidase La (EC 3.4.21.53) - Thermotoga maritima (strain
MSB8) >gi|4982206|gb|AAD36700.1|AE001806_10 (AE001806)
ATP-dependent protease LA [Thermotoga maritima]
Length = 787
Score = 118 bits (292), Expect = 4e-25
Identities = 88/272 (32%), Positives = 143/272 (52%), Gaps = 36/272 (13%)
Query: 688 FTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKY---VTREDVLEA 744
FT A+++IIRE + AG +R+L V+ ++ KG+K +T +DV E
Sbjct: 543 FTPGAIKKIIREYTKEAG--------VRNLERVIEKVIRKSLVKGEKKSFKITTKDVEEL 594
Query: 745 LQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAAS 804
L E+++ E +G V GLA G VL +E+++ P
Sbjct: 595 LGPPVFREEEIL---------------EEDTVGAVTGLAWT-PVGGSVLIVESLLLPG-- 636
Query: 805 KEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGED----ISRYDIHVQFLQTYEGVEGDSA 860
G +I+TG +G++ +E+ +++++ GE+ + DIH+ + +G SA
Sbjct: 637 --RGNLILTGNMGDVMKESARIALSVVRKMCGEECREVFEKNDIHIHVPEGAVPKDGPSA 694
Query: 861 SISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKAN 920
I++ A+ SA+ VR+DVAMTG +++RG++LPVGG+ K+ AA AGIKKVI+P N
Sbjct: 695 GITITVALYSAVTGKKVRRDVAMTGEITLRGKILPVGGIKEKLLAAKRAGIKKVILPSRN 754
Query: 921 EKDVFLSP-DKREKIEIIPVERIDEVLEVALV 951
DV P + +EI+ I EVL+ A+V
Sbjct: 755 RPDVEKIPKEYLNGMEIVYCSEIQEVLKEAIV 786
>pir||C82712 ATP-dependent serine proteinase La XF1189 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106159|gb|AAF83999.1|AE003953_3 (AE003953)
ATP-dependent serine proteinase La [Xylella fastidiosa]
Length = 848
Score = 118 bits (292), Expect = 4e-25
Identities = 91/308 (29%), Positives = 154/308 (49%), Gaps = 25/308 (8%)
Query: 691 DAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALQMAKP 750
DA+ +I+R R +G + + +V+ + V+ K T+ VL A+ +K
Sbjct: 552 DAIRDIVRYYTRESGVRNLEREISKICRKIVKEIALVGVKPVAKKSTKSKVLFAVT-SKN 610
Query: 751 LEKQLADWYIERKKEYQVIRTE-GGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGK 809
LEK L + + R E EIG V GLA E G +L IE+ + P +G
Sbjct: 611 LEKYLG------VRRFDFGRAEEANEIGLVTGLAWT-EVGGDLLQIESTLVPG----KGN 659
Query: 810 IIVTGKLGEIAREAVLNVSAIIKRYKG------EDISRYDIHVQFLQTYEGVEGDSASIS 863
+I+TG+LG + +E+ +++ + + D+H+ +G SA I+
Sbjct: 660 LILTGQLGNVMKESASAALTVVRSRADRFCIDVDFLHNQDVHLHVPDGATPKDGPSAGIA 719
Query: 864 VATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKD 923
+ T+++S L ++PVR DVAMTG +++RG V +GG+ K+ AA+ GI+ V+IP+ N +D
Sbjct: 720 MVTSLVSMLTKVPVRADVAMTGEITLRGRVSVIGGLKEKLLAALRGGIRTVLIPEGNRRD 779
Query: 924 VFLSP-DKREKIEIIPVERIDEVLEVALVESEKKKELIKRIRETLPLGVSESAGSETLHE 982
+ P + + I+PV+ IDEVL++AL + L ++ L A S
Sbjct: 780 LADIPANVTRALTIVPVKWIDEVLDLAL-----ESPLAPKVAAQLGKSKPRKAHSRVSTV 834
Query: 983 HGRDSGSA 990
G+ GS+
Sbjct: 835 RGKSKGSS 842
>dbj|BAB06769.1| (AP001517) ATP-dependent proteinase La 1 (lon) (class III
heat-shock protein) [Bacillus halodurans]
Length = 774
Score = 118 bits (292), Expect = 4e-25
Identities = 94/298 (31%), Positives = 149/298 (49%), Gaps = 27/298 (9%)
Query: 665 VENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAA 724
VE +R + ++ + K+ + T EE I + R R+ + R + + R
Sbjct: 496 VEKQRIALDYLLPKQMKEHGLTKGTFQVKEEAILKVIRYYTREAGVRSLERQMATLCRKG 555
Query: 725 GDIAVR-KGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLA 783
+ V K K+ V ++ +E + K LA+ E ++G GLA
Sbjct: 556 AKMLVSGKKKRVVVTQNTIETMLGKKRFRYGLAE--------------EQDQVGAATGLA 601
Query: 784 IIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIK-RYKGEDIS-- 840
G L IE V P +GK+I+TGKLG++ +E+ + I+ R K DI
Sbjct: 602 YT-TAGGDTLSIEVSVVPG----KGKLILTGKLGDVMKESAQAAFSYIRSRSKELDIDPS 656
Query: 841 ---RYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVG 897
+ DIH+ + +G SA I++ATA+ISAL V+++V MTG +++RG VLP+G
Sbjct: 657 FHEKNDIHIHVPEGATPKDGPSAGITMATALISALTGRVVKKEVGMTGEITLRGRVLPIG 716
Query: 898 GVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLEVALVESE 954
G+ K +A AG+ +IIPK NEKD+ P RE + I V+ +D+VL+ AL E +
Sbjct: 717 GLKEKSMSAHRAGLTTIIIPKENEKDLEDIPKSVREDLNYILVDHLDQVLKHALGEKK 774
>gb|AAA24079.1| (M38347) ATP-dependent proteinase (lon) [Escherichia coli]
Length = 797
Score = 117 bits (291), Expect = 5e-25
Identities = 91/270 (33%), Positives = 146/270 (53%), Gaps = 24/270 (8%)
Query: 698 REAQRRAGRKGHLTLRLRDLGGVVR----AAGDIAVRKGKKYVTREDVLEAL--QMAKPL 751
++ +R A +KG LT+ + G++R AG + + + R+ V + L + K +
Sbjct: 509 KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLKHI 568
Query: 752 E---KQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEG 808
E L D+ ++ +Y E +G+V GLA E G +L IE P +G
Sbjct: 569 EINGDNLHDYLGVQRFDYGRADNEN-RVGQVTGLAWT-EVGGDLLTIETACVPG----KG 622
Query: 809 KIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS-------RYDIHVQFLQTYEGVEGDSAS 861
K+ TG LGE+ +E++ ++ R + E + + DIHV + +G SA
Sbjct: 623 KLTYTGSLGEVMQESIQAALTVV-RARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAG 681
Query: 862 ISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANE 921
I++ TA++S L PVR DVAMTG +++RG+VLP+GG+ K+ AA GIK V+IP N+
Sbjct: 682 IAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFENK 741
Query: 922 KDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
+D+ PD ++I PV+RI+EVL +AL
Sbjct: 742 RDLEEIPDNVIADLDIHPVKRIEEVLTLAL 771
>sp|P08177|LON_ECOLI ATP-DEPENDENT PROTEASE LA >gi|7428225|pir||SUECLA endopeptidase La
(EC 3.4.21.53) - Escherichia coli
>gi|290454|gb|AAC36871.1| (L12349) lon protease
[Escherichia coli] >gi|1786643|gb|AAC73542.1| (AE000150)
DNA-binding, ATP-dependent protease La; heat shock
K-protein [Escherichia coli K12]
>gi|739999|prf||2004285A lon protease [Escherichia coli]
Length = 784
Score = 117 bits (291), Expect = 5e-25
Identities = 91/270 (33%), Positives = 146/270 (53%), Gaps = 24/270 (8%)
Query: 698 REAQRRAGRKGHLTLRLRDLGGVVR----AAGDIAVRKGKKYVTREDVLEAL--QMAKPL 751
++ +R A +KG LT+ + G++R AG + + + R+ V + L + K +
Sbjct: 509 KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLKHI 568
Query: 752 E---KQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEG 808
E L D+ ++ +Y E +G+V GLA E G +L IE P +G
Sbjct: 569 EINGDNLHDYLGVQRFDYGRADNEN-RVGQVTGLAWT-EVGGDLLTIETACVPG----KG 622
Query: 809 KIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS-------RYDIHVQFLQTYEGVEGDSAS 861
K+ TG LGE+ +E++ ++ R + E + + DIHV + +G SA
Sbjct: 623 KLTYTGSLGEVMQESIQAALTVV-RARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAG 681
Query: 862 ISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANE 921
I++ TA++S L PVR DVAMTG +++RG+VLP+GG+ K+ AA GIK V+IP N+
Sbjct: 682 IAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFENK 741
Query: 922 KDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
+D+ PD ++I PV+RI+EVL +AL
Sbjct: 742 RDLEEIPDNVIADLDIHPVKRIEEVLTLAL 771
>gb|AAA16837.1| (L20572) ATP-dependent protease [Escherichia coli]
Length = 784
Score = 117 bits (291), Expect = 5e-25
Identities = 91/270 (33%), Positives = 146/270 (53%), Gaps = 24/270 (8%)
Query: 698 REAQRRAGRKGHLTLRLRDLGGVVR----AAGDIAVRKGKKYVTREDVLEAL--QMAKPL 751
++ +R A +KG LT+ + G++R AG + + + R+ V + L + K +
Sbjct: 509 KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLKHI 568
Query: 752 E---KQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEG 808
E L D+ ++ +Y E +G+V GLA E G +L IE P +G
Sbjct: 569 EINGDNLHDYLGVQRFDYGRADNEN-RVGQVTGLAWT-EVGGDLLTIETACVPG----KG 622
Query: 809 KIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS-------RYDIHVQFLQTYEGVEGDSAS 861
K+ TG LGE+ +E++ ++ R + E + + DIHV + +G SA
Sbjct: 623 KLTYTGSLGEVMQESIQAALTVV-RARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAG 681
Query: 862 ISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANE 921
I++ TA++S L PVR DVAMTG +++RG+VLP+GG+ K+ AA GIK V+IP N+
Sbjct: 682 IAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFENK 741
Query: 922 KDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
+D+ PD ++I PV+RI+EVL +AL
Sbjct: 742 RDLEEIPDNVIADLDIHPVKRIEEVLTLAL 771
>gb|AAB40195.1| (U82664) ATP-dependent protease LA [Escherichia coli]
Length = 799
Score = 117 bits (291), Expect = 5e-25
Identities = 91/270 (33%), Positives = 146/270 (53%), Gaps = 24/270 (8%)
Query: 698 REAQRRAGRKGHLTLRLRDLGGVVR----AAGDIAVRKGKKYVTREDVLEAL--QMAKPL 751
++ +R A +KG LT+ + G++R AG + + + R+ V + L + K +
Sbjct: 524 KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLKHI 583
Query: 752 E---KQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEG 808
E L D+ ++ +Y E +G+V GLA E G +L IE P +G
Sbjct: 584 EINGDNLHDYLGVQRFDYGRADNEN-RVGQVTGLAWT-EVGGDLLTIETACVPG----KG 637
Query: 809 KIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS-------RYDIHVQFLQTYEGVEGDSAS 861
K+ TG LGE+ +E++ ++ R + E + + DIHV + +G SA
Sbjct: 638 KLTYTGSLGEVMQESIQAALTVV-RARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAG 696
Query: 862 ISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANE 921
I++ TA++S L PVR DVAMTG +++RG+VLP+GG+ K+ AA GIK V+IP N+
Sbjct: 697 IAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFENK 756
Query: 922 KDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
+D+ PD ++I PV+RI+EVL +AL
Sbjct: 757 RDLEEIPDNVIADLDIHPVKRIEEVLTLAL 786
>sp|P36772|LON_BACBR ATP-DEPENDENT PROTEASE LA >gi|98087|pir||B42375 endopeptidase La
(EC 3.4.21.53) [validated] - Bacillus brevis
>gi|402504|dbj|BAA00737.1| (D00863) lon protease
[Brevibacillus brevis]
Length = 779
Score = 117 bits (290), Expect = 7e-25
Identities = 111/384 (28%), Positives = 177/384 (45%), Gaps = 37/384 (9%)
Query: 577 VLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDT 636
V +DEI L+ + +A+ E P + S + T + + A +LDT
Sbjct: 418 VFLLDEIDKLASDFRGDPASALLEVLDP-NQNDKFSDHYIEETYDLTNVMFITTANSLDT 476
Query: 637 IEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQFVAQEVKKDGRIPHFTRDAVEEI 696
I + L R+ Y + + Q + KD DA+ ++
Sbjct: 477 IPR---PLLDRMEVISISGYTELEKLNILRGYLLPKQMEDHGLGKDKL--QMNEDAMLKL 531
Query: 697 IREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKK-YVTREDVLEALQMAKPLEKQL 755
+R R AG + R+ V R A I V KK V LEAL + KP +
Sbjct: 532 VRLYTREAGVRN----LNREAANVCRKAAKIIVGGEKKRVVVTAKTLEAL-LGKPRYR-- 584
Query: 756 ADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGK 815
+ + KK+ ++G V GLA + G L +E + +GK+ +TG+
Sbjct: 585 --YGLAEKKD---------QVGSVTGLAWT-QAGGDTLNVEVSILAG----KGKLTLTGQ 628
Query: 816 LGEIAREAVLNVSAIIKRYKGE------DISRYDIHVQFLQTYEGVEGDSASISVATAVI 869
LG++ +E+ + I+ E + DIH+ + +G SA I++ATA++
Sbjct: 629 LGDVMKESAQAAFSYIRSRASEWGIDPEFHEKNDIHIHVPEGAIPKDGPSAGITMATALV 688
Query: 870 SALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPD 929
SAL IPV+++V MTG +++RG VLP+GG+ K +A AG+ +I+PK NEKD+ P+
Sbjct: 689 SALTGIPVKKEVGMTGEITLRGRVLPIGGLKEKCMSAHRAGLTTIILPKDNEKDIEDIPE 748
Query: 930 K-REKIEIIPVERIDEVLEVALVE 952
RE + PVE +DEVL AL +
Sbjct: 749 SVREALTFYPVEHLDEVLRHALTK 772
>gb|AAA24078.1| (J03896) protease La (lon) [Escherichia coli]
Length = 783
Score = 114 bits (283), Expect = 4e-24
Identities = 89/270 (32%), Positives = 142/270 (51%), Gaps = 24/270 (8%)
Query: 698 REAQRRAGRKGHLTLRLRDLGGVVR------AAGDIAVRKGKKYVTREDVLEALQMAKPL 751
++ +R A +KG LT+ + G++R A +V+ R ++ K +
Sbjct: 508 KQIERNALKKGELTVDDSAIIGIIRYYTRERACVVWSVKSPNCVAKRLSSYCSITSLKHI 567
Query: 752 E---KQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEG 808
E L D+ ++ +Y E +G+V GLA E G +L IE P +G
Sbjct: 568 EINGDNLHDYLGVQRFDYGRADNEN-RVGQVTGLAWT-EVGGDLLTIETACVPG----KG 621
Query: 809 KIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS-------RYDIHVQFLQTYEGVEGDSAS 861
K+ TG LGE+ +E++ ++ R + E + + DIHV + +G SA
Sbjct: 622 KLTYTGSLGEVMQESIQAALTVV-RARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAG 680
Query: 862 ISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANE 921
I++ TA++S L PVR DVAMTG +++RG+VLP+GG+ K+ AA GIK V+IP N+
Sbjct: 681 IAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFENK 740
Query: 922 KDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
+D+ PD ++I PV+RI+EVL +AL
Sbjct: 741 RDLEEIPDNVIADLDIHPVKRIEEVLTLAL 770
>sp|P46067|LON_ERWAM ATP-DEPENDENT PROTEASE LA >gi|628639|pir||S47270 endopeptidase La
(EC 3.4.21.53) - Erwinia amylovora
>gi|535161|emb|CAA54779.1| (X77706) Lon protease
[Erwinia amylovora]
Length = 784
Score = 114 bits (283), Expect = 4e-24
Identities = 70/182 (38%), Positives = 107/182 (58%), Gaps = 12/182 (6%)
Query: 776 IGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKR-- 833
+G+V GLA E G +L IE P +GK+ TG LGE+ +E++ +++
Sbjct: 595 VGQVTGLAWT-EVGGDLLTIETACVPG----KGKLTYTGSLGEVMQESIQAALTVVRARA 649
Query: 834 ----YKGEDISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSV 889
G+ + DIHV + +G SA I++ TA++S L PVR DVAMTG +++
Sbjct: 650 EKLGINGDFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITL 709
Query: 890 RGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLEV 948
RG+VLP+GG+ K+ AA GIK V+IP N++D+ P+ ++I PV+RI+EVL +
Sbjct: 710 RGQVLPIGGLKEKLLAAHRGGIKTVLIPDENKRDLEEIPENVIADLDIHPVKRIEEVLAL 769
Query: 949 AL 950
AL
Sbjct: 770 AL 771
>sp|P43864|LON_HAEIN ATP-DEPENDENT PROTEASE LA >gi|1073891|pir||A64070 endopeptidase La
(EC 3.4.21.53) - Haemophilus influenzae (strain Rd
KW20) >gi|1573440|gb|AAC22121.1| (U32729) ATP-dependent
proteinase (lon) [Haemophilus influenzae Rd]
Length = 803
Score = 114 bits (283), Expect = 4e-24
Identities = 91/282 (32%), Positives = 141/282 (49%), Gaps = 22/282 (7%)
Query: 696 IIREAQRRAGRKGHLTLRLRDLGGVVR----AAGDIAVRKGKKYVTREDVLEALQMAKPL 751
+ ++ +R +KG LT+ + ++R AG + + + R+ V L K
Sbjct: 507 LAKQIERNGLKKGELTVEESAILDIIRYYTREAGVRGLEREISKICRKAVKNLLVNPKLK 566
Query: 752 E-----KQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKE 806
L D+ ++ E+ T+ IG V GLA E G +L IE A+
Sbjct: 567 SITVNSDNLHDYLGVKRFEFGKADTQN-RIGEVTGLAWT-EVGGDLLTIET----ASVVG 620
Query: 807 EGKIIVTGKLGEIAREAVLNVSAIIKR------YKGEDISRYDIHVQFLQTYEGVEGDSA 860
+GK+ TG LG++ +E++ +++ E + DIH+ +G SA
Sbjct: 621 KGKLSFTGSLGDVMKESIQAAMTVVRARADKLGINAEFHEKRDIHIHVPDGATPKDGPSA 680
Query: 861 SISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKAN 920
I++ TA+IS L PVR DVAMTG +S+RG+VLP+GG+ K+ AA GIK V+IPK N
Sbjct: 681 GIAMCTALISCLTGNPVRADVAMTGEISLRGKVLPIGGLKEKLLAAHRGGIKTVLIPKEN 740
Query: 921 EKDVFLSPDK-REKIEIIPVERIDEVLEVALVESEKKKELIK 961
KD+ P+ ++ + I VE IDEVL AL + E +K
Sbjct: 741 VKDLEEIPENVKQNLAIHAVETIDEVLGFALENPPEGIEFVK 782
>sp|Q9ZD92|LON_RICPR ATP-DEPENDENT PROTEASE LA >gi|7428226|pir||A71704 endopeptidase La
(EC 3.4.21.53) - Rickettsia prowazekii
>gi|3861007|emb|CAA14907.1| (AJ235271) ATP-DEPENDENT
PROTEASE LA (lon) [Rickettsia prowazekii]
Length = 784
Score = 114 bits (282), Expect = 6e-24
Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 12/192 (6%)
Query: 775 EIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKR- 833
+IG GLA E G +L IEA+ A +G+I TGKLG++ +E+ + + +
Sbjct: 594 QIGSTTGLAYT-EVGGELLTIEAL----AFSGKGEIKTTGKLGDVMKESAMAAYSCFRSR 648
Query: 834 -----YKGEDISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLS 888
K ++ +DIH+ +G SA ++ T ++S + +IPV + VAMTG ++
Sbjct: 649 ATNFGLKYDNYKDFDIHIHVPAGAIPKDGPSAGCALFTTIVSLMTKIPVHRTVAMTGEIT 708
Query: 889 VRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDV-FLSPDKREKIEIIPVERIDEVLE 947
+RG VLP+GG+ K+ AA GIK V+IP+ N KD+ + P+ +E +EII V ID+VL+
Sbjct: 709 LRGNVLPIGGLKEKLLAASRGGIKTVLIPEENVKDLKDIPPNIKENLEIISVSNIDQVLK 768
Query: 948 VALVESEKKKEL 959
ALVE K L
Sbjct: 769 HALVEMPINKGL 780
>pir||B75530 ATP-dependent proteinase LA - Deinococcus radiodurans (strain R1)
>gi|6458027|gb|AAF09931.1|AE001895_3 (AE001895)
ATP-dependent protease LA [Deinococcus radiodurans]
Length = 821
Score = 112 bits (278), Expect = 2e-23
Identities = 117/411 (28%), Positives = 187/411 (45%), Gaps = 36/411 (8%)
Query: 577 VLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDT 636
V+ +DE+ L Q +A+ E P Q V + FI A +
Sbjct: 430 VILLDEVDKLGSSYQGDPSSALLEVLDPSQNQHFTDHYLGVPFDLSEVMFIATA----NY 485
Query: 637 IEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQFVAQEVKKDGRIPHFTRDAVEEI 696
E++ AL R+ + Y+ + + R L + + Q K +I F+ A+E++
Sbjct: 486 PEQIPAALMDRMEVIEFNSYIEQEKLE-IAKRYLLPRQLLQNGLKPNQIS-FSDAALEKL 543
Query: 697 IREAQRRAGRKGHLTLRLRDLGGVVR-AAGDIAVRKGKKYVTREDVLEALQMAKPLEKQL 755
I R AG + R++G V R A +IA K K+ AK +K+L
Sbjct: 544 ISHYTREAGVRN----LEREIGTVARKVARNIATGKTKR-------------AKVTDKEL 586
Query: 756 ADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGK 815
+ Y+ + + +G G+ G +L +E + G +++TG+
Sbjct: 587 -EKYLGQPRHTPETENMEDMVGVSTGM-FYTPVGGDILFVETSIMTGKG---GGLLLTGQ 641
Query: 816 LGEI----AREAVLNVSAIIKRYK--GEDISRYDIHVQFLQTYEGVEGDSASISVATAVI 869
LG++ AR A+ + +R+ E + +IHV EG SA ++AT++I
Sbjct: 642 LGDVMKESARAALTYAKSNAERFHIDREKLDNSEIHVHVPAGAIPKEGPSAGGAMATSLI 701
Query: 870 SALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSP- 928
SAL IP R DVAMTG +++ G LP+GG+ K+ A AGIK +I+PKANE+D+ P
Sbjct: 702 SALTGIPARHDVAMTGEMTLTGRYLPIGGLKEKVLGARRAGIKHIILPKANERDINDIPL 761
Query: 929 DKREKIEIIPVERIDEVLEVALVESEKKKELIKRIRETLPLGVSESAGSET 979
R + P E +D+VL+VALV K E + + P S S G +T
Sbjct: 762 HLRSSMRFHPCETVDQVLDVALVGGLKALETPRTDSQVTPPADSGSKGRKT 812
>pir||T27382 hypothetical protein Y75B8A.4 - Caenorhabditis elegans
>gi|3980014|emb|CAA22082.1| (AL033514) predicted using
Genefinder~contains similarity to Pfam domain: PF00004
(ATPases associated with various cellular activities
(AAA)), Score=106.5, E-value=1.6e-28, N=1; PF02190
(ATP-dependent protease La (LON) domain), Score=-53.6,
E-value=0.0>
Length = 773
Score = 111 bits (274), Expect = 5e-23
Identities = 108/397 (27%), Positives = 185/397 (46%), Gaps = 38/397 (9%)
Query: 572 RAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSSGAMVRTEPVPCD---FIL 628
+ + V +DE+ L Q S A+ E P E +S +P D +
Sbjct: 394 KTNNPVFLLDEVDKLYSGNQGSPSAALLELLDP-----EQNSTFHDHYLNIPFDVSKIMF 448
Query: 629 VAAGNLDTIEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQFVAQEVKKDGRIPHF 688
+A N I+++ PALR R+ Y EN Q + D
Sbjct: 449 IATAN--DIDRLEPALRDRLEIIEMSGYSLKEKVKICENHLLTRQLTKHCISHD--YVKL 504
Query: 689 TRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTRE--DVLEALQ 746
R A+ +I E AG + R++G + R ++A+R + + DVL ++
Sbjct: 505 ERQAIVAMIEEYTMEAG----VRQLERNVGAICR---NVALRLAEALNSDPGADVLPVME 557
Query: 747 M-----AKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAP 801
+ A + K L + +++R K + +R + + IG G V+PIEA
Sbjct: 558 LPIQISASNIHKILKNKHMKRVKIVEKMRPLPAGVCFGLSVTTIG---GRVMPIEA---- 610
Query: 802 AASKEEGKIIVTGKLGEIAREAVLN----VSAIIKRYKGEDISRYDIHVQFLQTYEGVEG 857
+ SK GKI+ TG LG++ +E++L +SA +R + DIHV +G
Sbjct: 611 SKSKGTGKIVTTGHLGKVLKESILVAKGWLSANSERLGLGTLEDQDIHVHLPAGAVNKDG 670
Query: 858 DSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIP 917
SA +A A++S IP+R D A+TG +S+ G VLP+GGV K+ AA G+++V++P
Sbjct: 671 PSAGTGLACALVSLATNIPLRSDAAVTGEISLTGHVLPIGGVKEKVLAAQREGLRRVVLP 730
Query: 918 KANEKDVF-LSPDKREKIEIIPVERIDEVLEVALVES 953
K+NE++ + D R +++++ E I++V+ + +S
Sbjct: 731 KSNEEEYLKMDEDIRLEMDVVLAETIEDVIGAMMDKS 767
>pir||E71377 probable ATP-dependent proteinase LA (lon-1) - syphilis spirochete
>gi|3322266|gb|AAC65008.1| (AE001186) ATP-dependent
protease LA (lon-1) [Treponema pallidum]
Length = 857
Score = 109 bits (270), Expect = 1e-22
Identities = 117/464 (25%), Positives = 210/464 (45%), Gaps = 51/464 (10%)
Query: 536 NLTTEKGNLLANGLFVKNSGGLGTPAHLRVEPGMIHRAHKGVLFID-EIATLSLKMQQSL 594
NL G++ + G N G HLR+ G +HRAH GVL + E + L
Sbjct: 378 NLANLCGSIESKG----NEGDTLENGHLRIRAGALHRAHAGVLIVQLEDLLAEEEAWTHL 433
Query: 595 LTAMQEKKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYE 654
A++ K+ + S S G M+R E VP LV G + E++ S +
Sbjct: 434 KRALRTKQVLLPAGSSQSQG-MLRPEGVPLTCKLVLVGEPCSFERLSQEDSSFRELFKVC 492
Query: 655 VYMRTTMPDTVENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRL 714
T+MP++ +N+ L+ ++ + V + G A ++ A+ A L+
Sbjct: 493 AEFDTSMPNSDKNQVALIAYLDRVVARYGTFS-LDSSAYARLLAYAEELAESHTRLSTSF 551
Query: 715 RDLGGVVRAAGDIAV--RKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQV-IRT 771
+ +V + +AV +T V EAL + + + + + ++ +
Sbjct: 552 VQIADLVLESHAVAVDMHPDVSVITAHVVQEALNRRQYVCSRARERFQRMIACGELLVEV 611
Query: 772 EGGEIGRVNGLAI---IGEQSGIVLPIEAIVAPAASKEEGKIIV---TGKLGEIAREAVL 825
+G IGR+N LAI G GIV+ ++ A A++ +EG + + G GEI +A L
Sbjct: 612 QGYRIGRINALAIEEHCGHSFGIVI---SLTAQASAGKEGVMNIEREAGLSGEIYDKAHL 668
Query: 826 NVSAIIKRY------------------KGEDISRYDIHVQ--FLQTYEGVEGDSASISVA 865
++++++ KG+D + F Q+Y G++GDSAS +
Sbjct: 669 IITSLLREKCLSAFADAAFDPAVDDLGKGQDSFPLCLSAALCFEQSYHGIDGDSASAAEF 728
Query: 866 TAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIE-------AGIKKVIIPK 918
++SA+ P+RQD A+TGS++ G+V +GGV+ KI + G++ V+IPK
Sbjct: 729 LVLLSAIGRFPLRQDRAITGSVNQLGQVQAIGGVSEKISGFYDVCALNGLTGMQGVLIPK 788
Query: 919 ANEKDVFLSPDKREKI-----EIIPVERIDEVLEVALVESEKKK 957
++ +FL ++ + + V ID+ LE+ + + K++
Sbjct: 789 SSCAQLFLPERVQDAVRAGTFHVWAVCTIDDALELMVPDDLKEQ 832
>sp|O51558|LON2_BORBU ATP-DEPENDENT PROTEASE LA HOMOLOG >gi|7428228|pir||D70176
endopeptidase La (EC 3.4.21.53) 2 - Lyme disease
spirochete >gi|2688530|gb|AAC66962.1| (AE001162)
ATP-dependent protease LA (lon-2) [Borrelia burgdorferi]
Length = 813
Score = 106 bits (262), Expect = 1e-21
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 12/194 (6%)
Query: 759 YIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGE 818
Y++ + +I+ + G V GLA G VLP+EA +++G II+TG LG
Sbjct: 622 YVDTEDNLDLIKIDSS--GFVYGLAWTN-YGGTVLPVEA----TKFEKKGDIILTGSLGA 674
Query: 819 IAREAVLNVSAIIKRYKGE---DISRY-DIHVQFLQTYEGVEGDSASISVATAVISALEE 874
I +E+ +I+K Y + D+ +IH+ F + +G SA I++ATA+ S L +
Sbjct: 675 IMKESAQLAYSIVKTYSSKLNFDVKESPEIHLHFPEGATPKDGPSAGITIATAIASILSD 734
Query: 875 IPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REK 933
V D+AMTG ++++G VLPVGG+ K+ AA GI KVI+PK N+KD P++ ++
Sbjct: 735 KKVPLDLAMTGEVTLKGFVLPVGGIKEKVLAAYRNGISKVILPKDNKKDYSKLPEEVKDN 794
Query: 934 IEIIPVERIDEVLE 947
I++ V ++EV +
Sbjct: 795 IDVKFVSSLEEVFD 808
>emb|CAA76672.1| (Y17166) protease La [Campylobacter jejuni]
Length = 791
Score = 104 bits (257), Expect = 5e-21
Identities = 76/241 (31%), Positives = 127/241 (52%), Gaps = 30/241 (12%)
Query: 730 RKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEG-GEIGRVNGLAIIGEQ 788
RK K + E++ + + K L + L KK +++ + G ++G+VNGLA
Sbjct: 562 RKSAKKLLLENIKKVIINTKNLNEFLD------KKVFEIEKNNGENQVGQVNGLAWTSV- 614
Query: 789 SGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGED---------- 838
G VL +EA+ K +G++ +TG LG++ +E+ ++IK E
Sbjct: 615 GGDVLKVEAVKI----KGKGELTLTGSLGDVMKESARIAFSMIKVLIDEGKIKIPKKIII 670
Query: 839 ------ISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGE 892
Y+IH+ +G SA I+++TA+ S + V+ DVAMTG + ++G+
Sbjct: 671 DPKVNVYDSYNIHIHVPDGATPKDGPSAGITISTAIASIFSDKKVKADVAMTGEIDLKGK 730
Query: 893 VLPVGGVTPKIEAAIEAGIKKVIIPKAN-EKDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
VLP+GG+ K+ AA +A IK +IP+ N E+D+ P + R+ +EII V+ +VLE L
Sbjct: 731 VLPIGGLKEKLIAAYKADIKTALIPRKNYERDLKDIPSEVRDNMEIIAVDTFSDVLEYTL 790
Query: 951 V 951
V
Sbjct: 791 V 791
>sp|O69300|LON_CAMJE ATP-DEPENDENT PROTEASE LA >gi|11265377|pir||D81310 endopeptidase La
(EC 3.4.21.53) Cj1073c [imported] - Campylobacter jejuni
(strain NCTC 11168) >gi|6968507|emb|CAB73328.1|
(AL139077) ATP-dependent protease La [Campylobacter
jejuni]
Length = 791
Score = 104 bits (257), Expect = 5e-21
Identities = 76/241 (31%), Positives = 127/241 (52%), Gaps = 30/241 (12%)
Query: 730 RKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEG-GEIGRVNGLAIIGEQ 788
RK K + E++ + + K L + L KK +++ + G ++G+VNGLA
Sbjct: 562 RKSAKKLLLENIKKVIINTKNLNEFLD------KKVFEIEKNNGENQVGQVNGLAWTSV- 614
Query: 789 SGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGED---------- 838
G VL +EA+ K +G++ +TG LG++ +E+ ++IK E
Sbjct: 615 GGDVLKVEAVKI----KGKGELTLTGSLGDVMKESARIAFSMIKVLIDEGKIKIPKKIII 670
Query: 839 ------ISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGE 892
Y+IH+ +G SA I+++TA+ S + V+ DVAMTG + ++G+
Sbjct: 671 DPKVNVYDSYNIHIHVPDGATPKDGPSAGITISTAIASIFSDKKVKADVAMTGEIDLKGK 730
Query: 893 VLPVGGVTPKIEAAIEAGIKKVIIPKAN-EKDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
VLP+GG+ K+ AA +A IK +IP+ N E+D+ P + R+ +EII V+ +VLE L
Sbjct: 731 VLPIGGLKEKLIAAYKADIKTALIPRKNYERDLKDIPSEVRDNMEIIAVDTFSDVLEYTL 790
Query: 951 V 951
V
Sbjct: 791 V 791
>sp|P36774|LON2_MYXXA ATP-DEPENDENT PROTEASE LA 2 >gi|625654|pir||A36895 endopeptidase La
(EC 3.4.21.53) 2 - Myxococcus xanthus
>gi|309546|gb|AAA72018.1| (L19301) ATP-dependent
protease [Myxococcus xanthus] >gi|435451|dbj|BAA02491.1|
(D13204) ATP-dependent protease La [Myxococcus xanthus]
Length = 827
Score = 102 bits (251), Expect = 2e-20
Identities = 98/328 (29%), Positives = 160/328 (47%), Gaps = 50/328 (15%)
Query: 664 TVENRRKL--VQFVAQEVKKDGRIPH---FTRDAVEEIIREAQRRAGRKGHLTLRLRDLG 718
T E ++ + + V +++K+ G P T +A+ + R AG + +L R+ D+
Sbjct: 518 TFEEKQSIARIHLVPKQLKEHGLSPDHIDITDEALLTLTTAYTREAGVR-NLERRIADIC 576
Query: 719 GVVRAAGDIAVRKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGR 778
V A ++A K +K D ++ + + ++A+ RTE G
Sbjct: 577 RAV--AVEVAGGKTEKQTINADRVKEILGPEMFYSEVAE------------RTEVP--GV 620
Query: 779 VNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGED 838
GLA G +L IEA +G + +TG+LG++ +E+ + + R K E
Sbjct: 621 ATGLAWTAA-GGDLLFIEATKMAG----KGGMTLTGQLGDVMKESATAALSYL-RSKAEQ 674
Query: 839 IS-------RYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRG 891
+ + D+H+ F +G SA +++ TA+ S L I VR D AMTG ++RG
Sbjct: 675 LGISPNFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTSLLTGIRVRHDTAMTGEATLRG 734
Query: 892 EVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
VLPVGG+ K+ AA AGIK+VI+P+ KD+ PD+ R ++E I V +D+VL+ AL
Sbjct: 735 LVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLIDVPDQARNELEFIFVTHMDDVLKAAL 794
Query: 951 VESEKKKELIKRIRETLPLGVSESAGSE 978
ET P+GV+ + G E
Sbjct: 795 --------------ETPPVGVAGTPGGE 808
>sp|P57549|LON_BUCAI ATP-DEPENDENT PROTEASE LA >gi|10039140|dbj|BAB13174.1| (AP001119)
ATP-dependent protease La [Buchnera sp. APS]
Length = 777
Score = 101 bits (249), Expect = 4e-20
Identities = 62/183 (33%), Positives = 107/183 (57%), Gaps = 12/183 (6%)
Query: 775 EIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRY 834
+IG+V GLA E G +L IE +GK+ TG LGE+ +E++ +++
Sbjct: 594 QIGQVIGLAWT-EVGGELLTIETTCVSG----KGKLTYTGSLGEVMQESIQAALTVVRSQ 648
Query: 835 ------KGEDISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLS 888
K + ++DIHV + +G SA ++ TA++S+L PV+ +VAMTG ++
Sbjct: 649 ADRLGIKKDFHEKHDIHVHVPEGATPKDGPSAGAAMCTAIVSSLTNNPVKSNVAMTGEIT 708
Query: 889 VRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLE 947
+ G++LP+GG+ K+ AA GIK V+IP N++++ P E + I P+++I+EVL+
Sbjct: 709 LHGKILPIGGLKEKLLAAHRGGIKTVLIPYENKRNLEEIPKNIIEGLNIHPIKKIEEVLK 768
Query: 948 VAL 950
++L
Sbjct: 769 LSL 771
>pir||A36894 ATP-dependent proteinase BsgA - Myxococcus xanthus
Length = 827
Score = 100 bits (247), Expect = 7e-20
Identities = 98/328 (29%), Positives = 159/328 (47%), Gaps = 50/328 (15%)
Query: 664 TVENRRKL--VQFVAQEVKKDGRIPH---FTRDAVEEIIREAQRRAGRKGHLTLRLRDLG 718
T E ++ + + V +++K+ G P T +A+ + R AG + +L R+ D+
Sbjct: 518 TFEEKQSIARIHLVPKQLKEHGLSPDHIDITDEALLTLTTAYTREAGVR-NLERRIADIC 576
Query: 719 GVVRAAGDIAVRKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGR 778
V A ++A K +K D ++ + + ++A+ RTE G
Sbjct: 577 RAV--AVEVAGGKTEKQTINADRVKEILGPEMFYSEVAE------------RTEVP--GV 620
Query: 779 VNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGED 838
GLA G +L IEA +G + +TG+LG++ +E + + R K E
Sbjct: 621 ATGLAWTAA-GGDLLFIEATKMAG----KGGMTLTGQLGDVMKERPTAALSYL-RSKAEQ 674
Query: 839 IS-------RYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRG 891
+ + D+H+ F +G SA +++ TA+ S L I VR D AMTG ++RG
Sbjct: 675 LGISPNFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTSLLTGIRVRHDTAMTGEATLRG 734
Query: 892 EVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLEVAL 950
VLPVGG+ K+ AA AGIK+VI+P+ KD+ PD+ R ++E I V +D+VL+ AL
Sbjct: 735 LVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLIDVPDQARNELEFIFVTHMDDVLKAAL 794
Query: 951 VESEKKKELIKRIRETLPLGVSESAGSE 978
ET P+GV+ + G E
Sbjct: 795 --------------ETPPVGVAGTPGGE 808
>emb|CAC04500.1| (AL391588) ATP-dependent protease [Streptomyces coelicolor]
Length = 807
Score = 97.5 bits (239), Expect = 6e-19
Identities = 67/189 (35%), Positives = 103/189 (54%), Gaps = 9/189 (4%)
Query: 777 GRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKG 836
G GLA+ G G VL +EA +A + G + +TG+LG++ +E+ + ++ +
Sbjct: 614 GVATGLAVTGA-GGDVLYVEASLADPETGAAG-LTLTGQLGDVMKESAQIALSFLRSHGA 671
Query: 837 E------DISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVR 890
E D+ H+ F +G SA +++ TA+ S L VR DVAMTG +S+
Sbjct: 672 ELELPVGDLKDRGAHIHFPAGAVPKDGPSAGVTMTTALASLLSGRLVRTDVAMTGEVSLT 731
Query: 891 GEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLEVA 949
G VLP+GGV K+ AA AGI VIIPK NE D+ P + +K+++ V + +VLE+A
Sbjct: 732 GRVLPIGGVKQKLLAAHRAGITTVIIPKRNEPDLDDVPAQVLDKLDVHAVTDVRQVLELA 791
Query: 950 LVESEKKKE 958
L + E
Sbjct: 792 LAPATNGAE 800
>pir||A71825 endopeptidase La (EC 3.4.21.53) - Helicobacter pylori (strain J99)
>gi|4155905|gb|AAD06875.1| (AE001552) ATP-DEPENDENT
PROTEASE LA [Helicobacter pylori J99]
Length = 831
Score = 95.6 bits (234), Expect = 2e-18
Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 31/206 (15%)
Query: 772 EGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAII 831
E +IG VNGLA G VL IEA+ + +G++ +TG LG++ +E+ + +++
Sbjct: 631 EENKIGIVNGLAWT-PVGGDVLKIEAVKI----RGKGELKLTGSLGDVMKESAIIAFSVV 685
Query: 832 KRYKGEDISR------------------------YDIHVQFLQTYEGVEGDSASISVATA 867
K + + YD+H+ + +G SA I++A+
Sbjct: 686 KVLLDNETLKVPKIPSETDAENKKKKKVLKVYNAYDLHLHVPEGATPKDGPSAGIAMASV 745
Query: 868 VISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKAN-EKDVFL 926
+ S L + +R +VAMTG L++ GEVLP+GG+ K+ AA +AGIK +IP N E+D+
Sbjct: 746 MASILCDRAIRSEVAMTGELTLSGEVLPIGGLKEKLIAAFKAGIKTALIPVKNYERDLDE 805
Query: 927 SP-DKREKIEIIPVERIDEVLEVALV 951
P + RE + I+ V+ I EVLE L+
Sbjct: 806 IPTEVRENLNIVAVKNIAEVLEKTLL 831
>sp|P75867|LONH_ECOLI PUTATIVE PROTEASE LA HOMOLOG >gi|7449426|pir||B64836 probable
ATP-dependent proteinase b0955 - Escherichia coli
>gi|1787188|gb|AAC74041.1| (AE000197) putative
ATP-dependent protease [Escherichia coli K12]
Length = 586
Score = 95.2 bits (233), Expect = 3e-18
Identities = 112/441 (25%), Positives = 196/441 (44%), Gaps = 54/441 (12%)
Query: 563 LRVEPGMIHRAHKGVLFIDEIATLSLKMQ-QSLLTAMQEKKFPITGQSELSSGAMVRTEP 621
+ ++PG++H+A+ G+L I L+ + L + ++F E S V
Sbjct: 139 ITLQPGLVHQANGGILIISLRTLLAQPLLWMRLKNIVNRERFDWVAFDE-SRPLPVSVPS 197
Query: 622 VPCDFILVAAGNLDTI---EKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQFVAQE 678
+P ++ G +++ ++M P L + +E ++ ++V + V F A+
Sbjct: 198 MPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVDAESVTQWCRWVTFTARH 257
Query: 679 VKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTR 738
+P DA +IREA R G + L L + ++R ++A +
Sbjct: 258 ----NHLPAPGADAWPILIREAARYTGEQETLPLSPQ---WILRQCKEVASLCDGDTFSG 310
Query: 739 EDVLEALQMAKPLEKQLADWYIERKKEYQV-IRTEGGEIGRVNGLAIIGEQSGIVLPIEA 797
E + LQ + E LA+ + + Q+ I TEG IG++N L++I E
Sbjct: 311 EQLNLMLQQREWREGFLAERMQDEILQEQILIETEGERIGQINALSVI----------EF 360
Query: 798 IVAPAASKEEGKI-----IVTGKLGEIAREAVL--NVSA---------IIKRYKGEDISR 841
P A E +I I G+ +I R+A L N+ A ++ + E
Sbjct: 361 PGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIP 420
Query: 842 YDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTP 901
+ + F Q+Y V+GDSAS++ A+ISAL ++PV Q +A+TGS+ G PVGG+
Sbjct: 421 FSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNE 480
Query: 902 KIEAAIE-------AGIKKVIIPKANEKDVFLSPD-----KREKIEIIPVERIDEVLEVA 949
KIE G + VIIP AN + + L + + K I V+ + + L +
Sbjct: 481 KIEGFFAICQQRELTGKQGVIIPTANVRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLL 540
Query: 950 L---VESEKKKELIKRIRETL 967
L + E + L++ I+E +
Sbjct: 541 LNLVWDGEGQTTLMQTIQERI 561
>pir||F83073 probable ATP-dependent proteinase PA4576 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9950823|gb|AAG07964.1|AE004871_4 (AE004871) probable
ATP-dependent protease [Pseudomonas aeruginosa]
Length = 817
Score = 94.0 bits (230), Expect = 7e-18
Identities = 118/483 (24%), Positives = 206/483 (42%), Gaps = 72/483 (14%)
Query: 543 NLLANGLFVKNSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLK-MQQSLLTAMQEK 601
NL + + G L T ++ ++ PG +HRA+ G L ++ L + +L A+Q +
Sbjct: 330 NLFGRIEYSSDQGALYT-SYRQLRPGALHRANGGFLILEAEKMLGEPFVWDALKRALQSR 388
Query: 602 KFPITGQ-SELSSGAMVRTEP--VPCDFILVAAGNLD---TIEKMHPALRSRIRGYGYEV 655
+ + +EL A V P +P ++ G+ T++ + P + R V
Sbjct: 389 QLKMESPLAELGRLAAVSLTPQVIPLQLKVIIIGSRQIYYTLQDLDPDFQEMFRVL---V 445
Query: 656 YMRTTMPDTVENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLR 715
+P ++ + Q + ++G P + AV + + R A +G L+ R+
Sbjct: 446 DFDEDIPLGEDSLEQFAQLLKTRTSEEGMAP-LSGAAVARLATYSARLAEHQGRLSARIG 504
Query: 716 DLGGVVRAAGDIAVRKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQV-IRTEGG 774
DL +V A I ++ + + AL+ + +++ ++ + I T G
Sbjct: 505 DLFQLVSEADFIRQLANEEVIQLGHIERALKAKQTRTGRVSARILDDMLAGIILIDTAGA 564
Query: 775 EIGRVNGLAI--IGEQS-GIVLPIEAIVAPAAS---------------KEEGKIIVTGKL 816
+G+ NGL + +G+ G+ I A V P +S +G +I+TG L
Sbjct: 565 AVGKCNGLTVLEVGDSVFGVPARISATVYPGSSGIVDIEREVNLGQPIHSKGVMILTGYL 624
Query: 817 GE-IAREAVLNVSAIIKRYKGEDISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEI 875
G A+E L +SA I Q+Y V+GDSAS+ +ISAL
Sbjct: 625 GSRYAQEFPLEISASIA---------------LEQSYGYVDGDSASLGEVCTLISALSRT 669
Query: 876 PVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIE-------AGIKKVIIPKANEKDVFLSP 928
P++Q A+TGS++ GEV VGGV KIE G + VIIP+AN + L
Sbjct: 670 PLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGVIIPRANVTTLMLDE 729
Query: 929 D-----KREKIEIIPVERIDEVLEVAL-----VESEKKK--------ELIKRIRETLPLG 970
+ + + V +DE L + + + EK + ++ R++E LG
Sbjct: 730 RVLQAVRAGQFHVYAVREVDEALALLVGKPVGAQDEKGRFPKGSVNDLVVARLQEISELG 789
Query: 971 VSE 973
+ E
Sbjct: 790 MEE 792
>sp|P55995|LON_HELPY ATP-DEPENDENT PROTEASE LA >gi|7428229|pir||C64692 endopeptidase La
(EC 3.4.21.53) - Helicobacter pylori (strain 26695)
>gi|2314549|gb|AAD08421.1| (AE000638) ATP-dependent
protease (lon) [Helicobacter pylori 26695]
Length = 835
Score = 92.4 bits (226), Expect = 2e-17
Identities = 67/206 (32%), Positives = 108/206 (51%), Gaps = 31/206 (15%)
Query: 772 EGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAII 831
E +IG VNGLA G VL IE + + +G++ +TG LG++ +E+ + +++
Sbjct: 635 EENKIGIVNGLAWT-PVGGDVLKIEVLKI----RGKGELKLTGSLGDVMKESAIIAFSVV 689
Query: 832 KRYKGEDISR------------------------YDIHVQFLQTYEGVEGDSASISVATA 867
K + + YD+H+ + +G SA I++A+
Sbjct: 690 KVLLDNETLKVPKIPSETDAEGKKKKKVLKVYNAYDLHLHVPEGATPKDGPSAGIAMASV 749
Query: 868 VISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKAN-EKDVFL 926
+ S L + R +VAMTG L++ GEVLP+GG+ K+ AA +AGIK +IP N E+D+
Sbjct: 750 MASILCDRATRSEVAMTGELTLSGEVLPIGGLKEKLIAAFKAGIKTALIPVKNYERDLDE 809
Query: 927 SP-DKREKIEIIPVERIDEVLEVALV 951
P + RE + I+ V+ I EVLE L+
Sbjct: 810 IPAEVRENLNIVAVKNIAEVLEKTLL 835
>sp|O83536|LON_TREPA ATP-DEPENDENT PROTEASE LA >gi|7428233|pir||B71316 endopeptidase La
(EC 3.4.21.53) 2 - syphilis spirochete
>gi|3322814|gb|AAC65510.1| (AE001227) ATP-dependent
protease LA (lon-2) [Treponema pallidum]
Length = 881
Score = 90.9 bits (222), Expect = 6e-17
Identities = 67/217 (30%), Positives = 112/217 (50%), Gaps = 23/217 (10%)
Query: 772 EGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAII 831
+ ++G GLA G G L +EAI P + + +TG++G + +E+ + +
Sbjct: 678 DANKVGTAVGLAWTG-MGGDTLLVEAITIPGKASFK----LTGQMGAVMKESASIALSWL 732
Query: 832 KRYKGED-------ISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMT 884
+RY + + IH+ + +G SA I++ T + S L + V+ +AMT
Sbjct: 733 RRYSAQQRIASPNWFEKRAIHLHIPEGATPKDGPSAGITMTTTLFSLLTQQKVKPRLAMT 792
Query: 885 GSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDKREKIEIIP-VERID 943
G LS+ G+VLP+GG+ K AA GIK++I+PKAN +D+ P+ +K + VE ++
Sbjct: 793 GELSLTGQVLPIGGLKEKTIAARRGGIKEIIMPKANVRDLDEIPEHVKKGMVFHLVESME 852
Query: 944 EVLEVALVESEKKKELIKRIRETLPLGVSESAGSETL 980
EVL +A + KR+R ++SA ETL
Sbjct: 853 EVLSLAFPKG-------KRVRAGT---AAQSASPETL 879
>sp|O64948|LON1_ARATH MITOCHONDRIAL LON PROTEASE HOMOLOG 1 PRECURSOR
>gi|2935279|gb|AAC05085.1| (AF033862) Lon protease
[Arabidopsis thaliana] >gi|9759446|dbj|BAB10243.1|
(AB013394) mitochondrial Lon protease homolog 1
precursor [Arabidopsis thaliana]
Length = 888
Score = 88.5 bits (216), Expect = 3e-16
Identities = 54/155 (34%), Positives = 89/155 (56%), Gaps = 13/155 (8%)
Query: 807 EGKIIVTGKLGEIAREAVLNVSAIIKRYKGED-----------ISRYDIHVQFLQTYEGV 855
+G++ +TG+LG++ +E+ ++ R + D + DIH+ F
Sbjct: 721 KGEMHLTGQLGDVIKESA-QLALTWVRARASDFKLALAGDMNVLDGRDIHIHFPAGAVPK 779
Query: 856 EGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVI 915
+G SA +++ TA++S + VR D AMTG +++RG VLPVGG+ KI AA GIK+VI
Sbjct: 780 DGPSAGVTLVTALVSLFSQKRVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVI 839
Query: 916 IPKANEKDVFLSPDK-REKIEIIPVERIDEVLEVA 949
+P+ N KD+ P +E+I +R+++VLE A
Sbjct: 840 LPQRNSKDLVEVPAAVLSSLEVILAKRMEDVLENA 874
>sp|P93647|LON1_MAIZE MITOCHONDRIAL LON PROTEASE HOMOLOG 1 PRECURSOR
>gi|7428224|pir||T04321 endopeptidase La homolog (EC
3.4.21.-) LON1 precursor, mitochondrial - maize
>gi|1816586|gb|AAC50011.1| (U85494) LON1 protease [Zea
mays]
Length = 885
Score = 88.2 bits (215), Expect = 4e-16
Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 13/163 (7%)
Query: 799 VAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS-----------RYDIHVQ 847
V A +G + +TG+LG++ +E+ ++ R + D++ DIH+
Sbjct: 711 VEATAMVGKGDLHLTGQLGDVIKESA-QLALTWVRARAADLNLSPTSDINLLESRDIHIH 769
Query: 848 FLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAI 907
F +G SA +++ TA++S VR D AMTG +++RG VLPVGGV K+ AA
Sbjct: 770 FPAGAVPKDGPSAGVTLVTALVSLFSNRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAH 829
Query: 908 EAGIKKVIIPKANEKDVFLSP-DKREKIEIIPVERIDEVLEVA 949
GIK+VI+P+ N KD+ P +EI+ V+RI+EVL+ A
Sbjct: 830 RYGIKRVILPERNLKDLSEVPLPILSDMEILLVKRIEEVLDHA 872
>dbj|BAA77218.1| (AB026197) LON protease homologue [Lithospermum erythrorhizon]
Length = 222
Score = 87.4 bits (213), Expect = 7e-16
Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 20/210 (9%)
Query: 751 LEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKI 810
LEK L + ++ + + T G +G V A GE V A +G +
Sbjct: 9 LEKVLGPPRYDDREAAERVATPGVTVGLV-WTAFGGEVQ--------FVEATAMAGKGDL 59
Query: 811 IVTGKLGEIARE----AVLNVSA------IIKRYKGEDISRYDIHVQFLQTYEGVEGDSA 860
+TG+LG++ +E A+ V A +I + + DIH+ F +G SA
Sbjct: 60 HLTGQLGDVIKESAQIALTWVRARATELNLISAMETNLLDGRDIHIHFPAGAVPKDGPSA 119
Query: 861 SISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKAN 920
+++ T+++S + VR D AMTG +++RG VLPVGG+ K+ AA GIK+VI+P+ N
Sbjct: 120 GVTLVTSLVSLFGQKRVRADTAMTGEMTLRGLVLPVGGIKDKVLAAHRCGIKRVILPERN 179
Query: 921 EKDVFLSPDK-REKIEIIPVERIDEVLEVA 949
KD+ P +EII +R+++VLE A
Sbjct: 180 LKDLAEVPAAVLSSLEIILAKRMEDVLEQA 209
>emb|CAA52291.1| (X74215) Lon protease-like protein [Homo sapiens]
Length = 845
Score = 85.8 bits (209), Expect = 2e-15
Identities = 51/168 (30%), Positives = 91/168 (53%), Gaps = 7/168 (4%)
Query: 802 AASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDISRYD------IHVQFLQTYEGV 855
A ++G + VTG+LGE+ +E+ + + + D IH+ +
Sbjct: 678 AKGDKDGSLEVTGQLGEVMKESARIAYTFARAFLMQHAPANDYLVTSHIHLHVPEGATPK 737
Query: 856 EGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVI 915
+G SA ++ TA++S PVRQ++AMTG +S+ G++LPVGG+ K AA AG+ +I
Sbjct: 738 DGPSAGCTIVTALLSLAMGRPVRQNLAMTGEVSLTGKILPVGGIKEKTIAAKRAGVTCII 797
Query: 916 IPKANEKDVF-LSPDKREKIEIIPVERIDEVLEVALVESEKKKELIKR 962
+P N+KD + L+ E +E+ VE E+ ++A + + + ++R
Sbjct: 798 LPAENKKDFYDLAAFITEGLEVHFVEHYREIFDIAFPDEQAEALAVER 845
>gi|4758682 protease, serine, 15; Lon protease-like protein [Homo sapiens]
>gi|547864|sp|P36777|LONN_HUMAN MITOCHONDRIAL LON
PROTEASE HOMOLOG PRECURSOR >gi|631285|pir||S42366
endopeptidase La homolog (EC 3.4.21.-) precursor,
mitochondrial (version 2) - human
>gi|429100|emb|CAA53625.1| (X76040) Lon protease-like
protein [Homo sapiens] >gi|741362|prf||2007252A
ATP-dependent lon protease [Homo sapiens]
Length = 937
Score = 85.8 bits (209), Expect = 2e-15
Identities = 51/168 (30%), Positives = 91/168 (53%), Gaps = 7/168 (4%)
Query: 802 AASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDISRYD------IHVQFLQTYEGV 855
A ++G + VTG+LGE+ +E+ + + + D IH+ +
Sbjct: 770 AKGDKDGSLEVTGQLGEVMKESARIAYTFARAFLMQHAPANDYLVTSHIHLHVPEGATPK 829
Query: 856 EGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVI 915
+G SA ++ TA++S PVRQ++AMTG +S+ G++LPVGG+ K AA AG+ +I
Sbjct: 830 DGPSAGCTIVTALLSLAMGRPVRQNLAMTGEVSLTGKILPVGGIKEKTIAAKRAGVTCII 889
Query: 916 IPKANEKDVF-LSPDKREKIEIIPVERIDEVLEVALVESEKKKELIKR 962
+P N+KD + L+ E +E+ VE E+ ++A + + + ++R
Sbjct: 890 LPAENKKDFYDLAAFITEGLEVHFVEHYREIFDIAFPDEQAEALAVER 937
>gb|AAD24414.1|AF059309_1 (AF059309) LON protease [Homo sapiens]
Length = 959
Score = 85.4 bits (208), Expect = 3e-15
Identities = 50/168 (29%), Positives = 91/168 (53%), Gaps = 7/168 (4%)
Query: 802 AASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDISRYD------IHVQFLQTYEGV 855
A ++G + VTG+LGE+ +E+ + + + D IH+ +
Sbjct: 792 AKGDKDGSLEVTGQLGEVMKESARIAYTFARAFLMQHAPANDYLVTSHIHLHVPEGATPK 851
Query: 856 EGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVI 915
+G SA ++ TA++S PVRQ++AMTG +S+ G++LPVGG+ K AA AG+ ++
Sbjct: 852 DGPSAGCTIVTALLSLAMGRPVRQNLAMTGEVSLTGKILPVGGIKEKTIAAKRAGVTCIV 911
Query: 916 IPKANEKDVF-LSPDKREKIEIIPVERIDEVLEVALVESEKKKELIKR 962
+P N+KD + L+ E +E+ VE E+ ++A + + + ++R
Sbjct: 912 LPAENKKDFYDLAAFITEGLEVHFVEHYREIFDIAFPDEQAEALAVER 959
>gi|11424964 protease, serine, 15 [Homo sapiens]
Length = 443
Score = 85.4 bits (208), Expect = 3e-15
Identities = 50/168 (29%), Positives = 91/168 (53%), Gaps = 7/168 (4%)
Query: 802 AASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDISRYD------IHVQFLQTYEGV 855
A ++G + VTG+LGE+ +E+ + + + D IH+ +
Sbjct: 276 AKGDKDGSLEVTGQLGEVMKESARIAYTFARAFLMQHAPANDYLVTSHIHLHVPEGATPK 335
Query: 856 EGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVI 915
+G SA ++ TA++S PVRQ++AMTG +S+ G++LPVGG+ K AA AG+ ++
Sbjct: 336 DGPSAGCTIVTALLSLAMGRPVRQNLAMTGEVSLTGKILPVGGIKEKTIAAKRAGVTCIV 395
Query: 916 IPKANEKDVF-LSPDKREKIEIIPVERIDEVLEVALVESEKKKELIKR 962
+P N+KD + L+ E +E+ VE E+ ++A + + + ++R
Sbjct: 396 LPAENKKDFYDLAAFITEGLEVHFVEHYREIFDIAFPDEQAEALAVER 443
>dbj|BAA35713.1| (D90733) Lon protease (lon) homolog [Escherichia coli]
Length = 389
Score = 84.7 bits (206), Expect = 5e-15
Identities = 102/380 (26%), Positives = 169/380 (43%), Gaps = 50/380 (13%)
Query: 621 PVPCDFILVAAG-NLDTIEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKLVQFVAQEV 679
P+ ILV +L ++M P L + +E ++ ++V + V F A+
Sbjct: 2 PLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVDAESVTQWCRWVTFTARH- 60
Query: 680 KKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTRE 739
+P DA +IREA R G + L L + ++R ++A + E
Sbjct: 61 ---NHLPAPGADAWPILIREAARYTGEQETLPLSPQ---WILRQCKEVASLCDGDTFSGE 114
Query: 740 DVLEALQMAKPLEKQLADWYIERKKEYQV-IRTEGGEIGRVNGLAIIGEQSGIVLPIEAI 798
+ LQ + E LA+ + + Q+ I TEG IG++N L++I E
Sbjct: 115 QLNLMLQQREWREGFLAERMQDEILQEQILIETEGERIGQINALSVI----------EFP 164
Query: 799 VAPAASKEEGKI-----IVTGKLGEIAREAVL--NVSA---------IIKRYKGEDISRY 842
P A E +I I G+ +I R+A L N+ A ++ + E +
Sbjct: 165 GHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIPF 224
Query: 843 DIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPK 902
+ F Q+Y V+GDSAS++ A+ISAL ++PV Q +A+TGS+ G PVGG+ K
Sbjct: 225 SASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNEK 284
Query: 903 IEAAIE-------AGIKKVIIPKANEKDVFLSPD-----KREKIEIIPVERIDEVLEVAL 950
IE G + VIIP AN + + L + + K I V+ + + L + L
Sbjct: 285 IEGFFAICQQRELTGKQGVIIPTANVRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLLL 344
Query: 951 ---VESEKKKELIKRIRETL 967
+ E + L++ I+E +
Sbjct: 345 NLVWDGEGQTTLMQTIQERI 364
>sp|P36776|LONM_HUMAN MITOCHONDRIAL LON PROTEASE HOMOLOG PRECURSOR
>gi|1362755|pir||S57342 endopeptidase La homolog (EC
3.4.21.-) precursor, mitochondrial (version 1) - human
>gi|440874|gb|AAA61616.1| (U02389) hLON ATP-dependent
protease [Homo sapiens]
Length = 962
Score = 84.3 bits (205), Expect = 6e-15
Identities = 50/168 (29%), Positives = 90/168 (52%), Gaps = 7/168 (4%)
Query: 802 AASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDISRYD------IHVQFLQTYEGV 855
A ++G + VTG+LGE+ +E+ + + + D IH +
Sbjct: 795 AKGDKDGSLEVTGQLGEVMKESARIAYTFARAFLMQHAPANDYLVTSHIHPHVPEGATPK 854
Query: 856 EGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVI 915
+G SA ++ TA++S PVRQ++AMTG +S+ G++LPVGG+ K AA AG+ ++
Sbjct: 855 DGPSAGCAIVTALLSLAMGRPVRQNLAMTGEVSLTGKILPVGGIKEKTIAAKRAGVTCIV 914
Query: 916 IPKANEKDVF-LSPDKREKIEIIPVERIDEVLEVALVESEKKKELIKR 962
+P N+KD + L+ E +E+ VE E+ ++A + + + ++R
Sbjct: 915 LPAENKKDFYDLAAFITEGLEVHFVEHYREIFDIAFPDEQAEALAVER 962
>sp|O44952|LONM_CAEEL MITOCHONDRIAL LON PROTEASE HOMOLOG PRECURSOR
>gi|7496971|pir||T32883 hypothetical protein C34B2.6 -
Caenorhabditis elegans >gi|2804417|gb|AAB97538.1|
(AF043693) similar to the LON family of ATP-dependent
proteases [Caenorhabditis elegans]
Length = 971
Score = 83.1 bits (202), Expect = 1e-14
Identities = 54/181 (29%), Positives = 93/181 (50%), Gaps = 11/181 (6%)
Query: 777 GRVNGLAIIGEQSGIVLPIEAIV---APAASKEEGKIIVTGKLGEIAREAVLNVSAIIKR 833
G + GLA G L IE ++ + ++G I TG LG++ +E+V + K
Sbjct: 788 GVIMGLAWTA-MGGSALYIETVLKRPVDLTNDKDGSIETTGNLGDVMKESVRTALTVAKG 846
Query: 834 YKGED------ISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSL 887
+ + IH+ + +G SA +++ ++++S + PV QD+AMTG +
Sbjct: 847 ILAREQPDNKFFDKAHIHIHVPEGATPKDGPSAGVTLVSSLLSLALDRPVVQDMAMTGEI 906
Query: 888 SVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPD-KREKIEIIPVERIDEVL 946
S+ G+VLPVGG+ K+ AA G K+V +P N +D P+ + +++I V DE+
Sbjct: 907 SLTGKVLPVGGIREKVIAARRVGAKRVFLPNENRRDFDDLPEFMKSELDIRFVSHYDELY 966
Query: 947 E 947
E
Sbjct: 967 E 967
>sp|O04979|LON1_SPIOL MITOCHONDRIAL LON PROTEASE HOMOLOG 1 PRECURSOR
>gi|7435765|pir||T09142 endopeptidase La homolog (EC
3.4.21.-) - spinach >gi|2208927|dbj|BAA20482.1| (D85610)
ATP-dependent protease Lon [Spinacia oleracea]
Length = 875
Score = 82.7 bits (201), Expect = 2e-14
Identities = 68/227 (29%), Positives = 114/227 (49%), Gaps = 29/227 (12%)
Query: 736 VTREDVLEALQMAKPL-------EKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQ 788
V ++ ALQ+ PL E L + ++ + + G +G V A GE
Sbjct: 653 VDNREISNALQVMSPLIVDETMLENVLGPPRYDDRETAERVSNPGVSVGLV-WTAFGGE- 710
Query: 789 SGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDISRY------ 842
V +EA V +G++ +TG+LG++ +E+ ++ R + +++
Sbjct: 711 ---VQFVEASVMAG----KGELRLTGQLGDVIKESA-QIALTWVRARAMELNLVATGEIN 762
Query: 843 -----DIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVG 897
DIH+ F +G SA +++ TA++S L + +R D AMTG +++RG VLPVG
Sbjct: 763 LMEGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLLSQKRMRADTAMTGEMTLRGLVLPVG 822
Query: 898 GVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERID 943
GV K+ AA GIK+VI+P+ N KD+ P +EII +R++
Sbjct: 823 GVKDKVLAAHRYGIKRVILPERNLKDLVEVPSAVLSNLEIIYAKRME 869
>pir||D82901 ATP-dependent proteinase UU348 [imported] - Ureaplasma urealyticum
>gi|6899328|gb|AAF30757.1|AE002132_1 (AE002132)
ATP-dependent protease [Ureaplasma urealyticum]
Length = 791
Score = 82.3 bits (200), Expect = 2e-14
Identities = 85/275 (30%), Positives = 131/275 (46%), Gaps = 27/275 (9%)
Query: 688 FTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRA-AGDIAVRKGKKYVTREDVLEALQ 746
FT DA++ II + AG + R LG +VR + K + V EA+
Sbjct: 533 FTDDALDFIINHYTKEAGVRE----LDRQLGHIVRKYIVETYKNKNNQSPLNLKVDEAM- 587
Query: 747 MAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKE 806
+ K L K D+ KKE I G VNG+A G +LPIE V + + +
Sbjct: 588 IIKYLGKIKFDF---NKKEETTIP------GIVNGMAYTAA-GGDLLPIE--VNHSTNGK 635
Query: 807 EGKIIVTGKLGEIAREAVLNVSAIIK----RY----KGEDISRYDIHVQFLQTYEGVEGD 858
G + +TG L + E+V +K +Y K DIHV +G
Sbjct: 636 GGNVTITGNLEKTMNESVSVALGFVKANADKYGIDTKKVSFKEIDIHVHVPSGGIPKDGP 695
Query: 859 SASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPK 918
SA I++ TA+IS+L + PVR ++MTG + +RG V +GGV K+ +A AG++++I+P
Sbjct: 696 SAGIAITTAIISSLSQRPVRTTLSMTGEIMLRGNVGIIGGVKEKVISAYRAGVREIILPI 755
Query: 919 ANEKDVFLSPDK-REKIEIIPVERIDEVLEVALVE 952
+E+ + P + I+I V+ DEV + E
Sbjct: 756 DDERYLEDVPKYILDDIKIHLVKHYDEVYNIVFGE 790
>sp|O31147|LON_MYCSM ATP-DEPENDENT PROTEASE LA >gi|2623234|gb|AAB86425.1| (AF030688)
ATP-dependent proteinase [Mycobacterium smegmatis]
Length = 779
Score = 80.0 bits (194), Expect = 1e-13
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 34/273 (12%)
Query: 707 KGHLTLRLRDLGGVVR---AAGDIAVRKGKKYVTREDVLEALQ--MAKPLEK---QLADW 758
+G L R R+ GG+ + A+RK TRE + + +AK + K +LAD
Sbjct: 500 QGFLLPRQRERGGLTSDEVTVTEAALRKIAADYTREPGVRQFERLLAKAMRKAATKLADH 559
Query: 759 ---------------YIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAA 803
Y+ R + G GLA+ G G VL IEA +
Sbjct: 560 PQAAPITIDEPDLVEYLGRPRFLPESAERTAVPGVATGLAVTG-LGGDVLYIEA----NS 614
Query: 804 SKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGE-----DISRYDIHVQFLQTYEGVEGD 858
++ E + +TG+LG++ +E+ + ++ + + + IH+ +G
Sbjct: 615 TEGEPGLQLTGQLGDVMKESAQIAMSYVRAHAKQLGVDPEALNRRIHIHVPAGAVPKDGP 674
Query: 859 SASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPK 918
SA +++ TA++S VR DV MTG +++ G VLP+GGV K+ AA AG+ V IP+
Sbjct: 675 SAGVTMVTALVSMATGRKVRGDVGMTGEVTLNGRVLPIGGVKQKLLAAQRAGLSTVFIPQ 734
Query: 919 ANEKDVFLSP-DKREKIEIIPVERIDEVLEVAL 950
N+ D+ P D + +++ P+ + +++ AL
Sbjct: 735 RNQPDLDDVPADVLDALDVRPMTDVADIIAAAL 767
>sp|Q59185|LON_BORBU ATP-DEPENDENT PROTEASE LA >gi|7428234|pir||E70131 endopeptidase La
(EC 3.4.21.53) 1 - Lyme disease spirochete
>gi|1255893|gb|AAB72011.1| (L77216) Lon protease
[Borrelia burgdorferi] >gi|2688145|gb|AAB91493.1|
(AE001135) ATP-dependent protease LA (lon-1) [Borrelia
burgdorferi]
Length = 806
Score = 79.2 bits (192), Expect = 2e-13
Identities = 71/239 (29%), Positives = 118/239 (48%), Gaps = 18/239 (7%)
Query: 724 AGDIAVRKGKKY---VTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGE----I 776
A D VR +KY + R+ + ++ + Q+++ +E V R E
Sbjct: 570 ARDNGVRNFEKYLNKIVRKVARKLIENTEVKSYQISNDNLEEYVGVPVFRKESMPNAMYS 629
Query: 777 GRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKG 836
G V GLA G L IE + + G I +TG+LG++ +E+ + KG
Sbjct: 630 GMVMGLAWTN-YGGSTLMIETV---KTESKVGGIKLTGRLGDVMKESANIAYTYVNSIKG 685
Query: 837 E-DISR--YDIHVQFLQTYEGV---EGDSASISVATAVISALEEIPVRQDVAMTGSLSVR 890
+ IS+ ++ ++ L EG +G SA I++A+A IS VR +AMTG LS+
Sbjct: 686 DLSISKSFFEKNIIHLHIPEGATPKDGPSAGITIASAFISLALNKVVRPHLAMTGELSLT 745
Query: 891 GEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPDK-REKIEIIPVERIDEVLEV 948
G V+ +GG+ KI AA +G++ +I+PKAN D+ P + I V+ + EV+++
Sbjct: 746 GNVMMIGGLKEKIIAAKRSGVEHIIVPKANRVDLEEIPTNIKSGINFYLVDNMREVIKL 804
>gb|AAF49134.1| (AE003516) CG8798 gene product [Drosophila melanogaster]
Length = 1006
Score = 78.8 bits (191), Expect = 3e-13
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 8/180 (4%)
Query: 808 GKIIVTGKLGEIAREAVLNVSAIIKRY------KGEDISRYDIHVQFLQTYEGVEGDSAS 861
G + +TG LG++ +E+ + + + + + IH+ + +G SA
Sbjct: 823 GSLHITGNLGDVMKESAQIALTVARNFLYSLEPNNLFLEQEHIHLHVPEGATPKDGPSAG 882
Query: 862 ISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANE 921
I++ TA++S PVRQD+AMTG +S++G+VLPVGG+ K AA +G+ +I+P N+
Sbjct: 883 ITIITALVSLATGKPVRQDIAMTGEVSLKGKVLPVGGIKEKTIAARRSGVNCLILPVDNK 942
Query: 922 KDVFLSPDK-REKIEIIPVERIDEVLEVALVE-SEKKKELIKRIRETLPLGVSESAGSET 979
KD P + +E+ ++V ++A + +E ++ L + +A SET
Sbjct: 943 KDFEELPTYITDGLEVHFATTYEDVYKIAFTDVTETTTNNVEEQEPLQKLSSAAAAKSET 1002
>sp|P93655|LON2_ARATH MITOCHONDRIAL LON PROTEASE HOMOLOG 2 PRECURSOR
>gi|1848291|gb|AAB48000.1| (U88087) LON protease homolog
[Arabidopsis thaliana]
Length = 941
Score = 77.6 bits (188), Expect = 6e-13
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 12/219 (5%)
Query: 738 REDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEA 797
RED L L+ E LAD Y+ + + E +G V GLA G L IE
Sbjct: 720 REDSL--LKKVMIDESNLAD-YVGKPVFHAEKLYEQTPVGVVMGLAWTS-MGGSTLYIET 775
Query: 798 IVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRY------KGEDISRYDIHVQFLQT 851
V + +G + +TG+LG++ +E+ + ++ + + + +H+
Sbjct: 776 TVVEEG-EGKGGLNITGQLGDVMKESAQIAHTVARKIMLEKEPENQFFANSKLHLHVPAG 834
Query: 852 YEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGI 911
+G SA ++ T+++S + PVR+D+AMTG +++ G +LP+GGV K AA + I
Sbjct: 835 ATPKDGPSAGCTMITSLLSLATKKPVRKDLAMTGEVTLTGRILPIGGVKEKTIAARRSQI 894
Query: 912 KKVIIPKANEKDV-FLSPDKREKIEIIPVERIDEVLEVA 949
K +I P+AN +D L+ + +E + + V+ ++ E+A
Sbjct: 895 KTIIFPEANRRDFDELAENVKEGLNVHFVDDYGKIFELA 933
>pir||C82194 ATP-dependent proteinase LA-related protein VC1482 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655983|gb|AAF94637.1| (AE004226) ATP-dependent
protease LA-related protein [Vibrio cholerae]
Length = 598
Score = 77.3 bits (187), Expect = 8e-13
Identities = 63/222 (28%), Positives = 109/222 (48%), Gaps = 23/222 (10%)
Query: 768 VIRTEGGEIGRVNGLAIIGEQSGIVLPI--EAIVAPAASKEEGKIIVTGKL----GEIAR 821
+I T+G ++G+VNGL +I E +G +P A ++ +G I + G +
Sbjct: 355 IIETQGEQVGQVNGLTVI-EVTGHPMPYGEPARISCVIHFGDGDIADXERKVELGGNLHA 413
Query: 822 EAVLNVSAIIKRYKGEDISR-YDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQD 880
+ ++ + A + D S + + F Q+Y V+GDSAS++ +++SAL E P+ Q
Sbjct: 414 KGMMIMQAFVSSALNLDGSLPFSASIVFEQSYSEVDGDSASLAELCSLVSALSEYPIDQQ 473
Query: 881 VAMTGSLSVRGEVLPVGGVTPKIEAAIE-------AGIKKVIIPKANEKDVFLSPDKREK 933
+A+TG++ G V VGG+ KIE G + VI+P +N K + L E
Sbjct: 474 IAVTGAVDQFGRVQAVGGLNEKIEGFYRVCCHQGLTGEQGVILPSSNLKHLALHKSVVES 533
Query: 934 IE-----IIPVERIDEVLEVAL---VESEKKKELIKRIRETL 967
I+ I PV +DE + + + E + +I +I E +
Sbjct: 534 IKNGEFNIWPVSTVDEAIPLLMGKPFRGEDEDSVIAKIAERI 575
>sp|P47481|LON_MYCGE ATP-DEPENDENT PROTEASE LA >gi|1361460|pir||D64226 endopeptidase La
(EC 3.4.21.53) - Mycoplasma genitalium
>gi|3844843|gb|AAC71460.1| (U39703) ATP-dependent
protease La (lon) [Mycoplasma genitalium]
Length = 795
Score = 76.9 bits (186), Expect = 1e-12
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 29/265 (10%)
Query: 688 FTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALQM 747
FT +A+ II+ R AG +R L +++ + +K +++ ++ +
Sbjct: 547 FTDEAISYIIKFYTREAG--------VRQLERLIQQVVRKYIVAMQKDGIKQETIDVNAV 598
Query: 748 AKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEE 807
K L+K++ D +R E G VNG+A G +LPIE V A K
Sbjct: 599 KKYLKKEIFD---------HTMRDEVSLPGIVNGMAYT-PTGGDLLPIE--VTHVAGK-- 644
Query: 808 GKIIVTGKLGEIARE----AVLNVSAIIKRYKGED--ISRYDIHVQFLQTYEGVEGDSAS 861
G++I+TG L + RE A+ V A +R+ + DI++ +G SA
Sbjct: 645 GELILTGNLKQTMRESANVALGYVKANAERFNINPSLFKKIDINIHVPGGGIPKDGPSAG 704
Query: 862 ISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANE 921
++ TA+IS+L V VAMTG +++RG+VL +GGV K +A G+ + +P+ NE
Sbjct: 705 AALVTAIISSLTGKKVDPTVAMTGEITLRGKVLVIGGVKEKTISAYRGGVTTIFMPEKNE 764
Query: 922 KDVFLSPDK-REKIEIIPVERIDEV 945
+ + P + +K+ II V+ ++
Sbjct: 765 RYLDEVPKEIVDKLNIIFVKEYSDI 789
>sp|Q9Z9F4|LON_CHLPN ATP-DEPENDENT PROTEASE LA >gi|7428232|pir||B72128 endopeptidase La
(EC 3.4.21.53) - Chlamydophila pneumoniae (strains
CWL029 and AR39) >gi|4376280|gb|AAD18180.1| (AE001588)
Lon ATP-dependent Protease [Chlamydophila pneumoniae
CWL029] >gi|7189665|gb|AAF38554.1| (AE002233) protease,
Lon family [Chlamydophila pneumoniae AR39]
>gi|8978402|dbj|BAA98239.1| (AP002545) Lon ATP-dependent
protease [Chlamydophila pneumoniae J138]
Length = 819
Score = 76.9 bits (186), Expect = 1e-12
Identities = 97/393 (24%), Positives = 167/393 (41%), Gaps = 44/393 (11%)
Query: 572 RAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSSGAMVRTEPVPCDFILVAA 631
+A V+ IDE+ + +A+ E P + L VR + FIL A
Sbjct: 451 QAMNPVIMIDEVDKIGASYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFILTA- 509
Query: 632 GNLDTIEKMHPALRS----RIRGYGYEVYMRTTMPDTVENRRKLVQFVAQEVKKDGRIPH 687
LDTI P L R+ GY E ++ V RK + A EV +
Sbjct: 510 NVLDTIPD--PLLDRMEILRLSGYILEEKLQIAKKYLVPKARKEIGLTASEV-------N 560
Query: 688 FTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALQM 747
F +A++ +I R AG +R L G ++ + + K V ++ ++ ++
Sbjct: 561 FQPEALKYMINNYAREAG--------VRTLNGNIKK---VLRKVALKIVQNQEKPKSKKI 609
Query: 748 AKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEE 807
+ + Y+ + E +G GLA G L IE++ + +
Sbjct: 610 TFKISSKNLQTYLGKPIFSSDRFYESTPVGVATGLAWTS-LGGATLYIESVQVSSLKTD- 667
Query: 808 GKIIVTGKLGEIAREAVLNVSAIIKRYKGEDISRY----------DIHVQFLQTYEGVEG 857
+ +TG+ GE+ +E+ S I Y + RY +H+ + +G
Sbjct: 668 --MHLTGQAGEVMKES----SQIAWTYLHSALHRYAPGYTFFPKSQVHIHIPEGATPKDG 721
Query: 858 DSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIP 917
SA I++ T+++S L E PV ++ MTG +++ G VL VGG+ K+ AA + + +I P
Sbjct: 722 PSAGITMVTSLLSLLLETPVVNNLGMTGEITLTGRVLGVGGIREKLIAARRSRLNILIFP 781
Query: 918 KANEKDVFLSPD-KREKIEIIPVERIDEVLEVA 949
+ N +D P + ++I V D+VL+VA
Sbjct: 782 EDNRRDYEELPAYLKTGLKIHFVSHYDDVLKVA 814
>sp|P43865|LONH_HAEIN PUTATIVE PROTEASE LA HOMOLOG >gi|1074982|pir||F64116 endopeptidase
La homolog HI1324 - Haemophilus influenzae (strain Rd
KW20) >gi|1574785|gb|AAC22971.1| (U32812) lon protease,
putative [Haemophilus influenzae Rd]
Length = 601
Score = 76.5 bits (185), Expect = 1e-12
Identities = 99/428 (23%), Positives = 179/428 (41%), Gaps = 70/428 (16%)
Query: 563 LRVEPGMIHRAHKGVLFIDEIATLS-LKMQQSLLTAMQEKKFPITGQSELSSGAMVRTEP 621
+++ PG++H+A+ GVL + LS + L +Q + F +
Sbjct: 157 IQLVPGLVHKANGGVLILSAATLLSQFDLWGRLKQILQTQTFDWYSAHPFKN-------- 208
Query: 622 VPCDFI-------LVAAGN---LDTIEKMHPALRSRIRGYGYEVYMRTTMPDTVENRRKL 671
+PCD ++ GN L T+ ++ L S E Y+ + +
Sbjct: 209 LPCDIPSYALNLKVIVLGNRTELATLAELEENLYSFADYAEIESYISVAEVEEQKTWAGY 268
Query: 672 VQFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRK 731
VQ +AQE + + + ++RE++ R L+L++ + +
Sbjct: 269 VQQMAQEQNIELDFLALNK-LYQLLVRESENRFLINAS-PLKLKE------------ILQ 314
Query: 732 GKKYVTREDVLEALQMAKPLEKQLADW-------YIERKKEYQVIRTEGGEIGRVNGLAI 784
T + L A+ +++LA + Y + E + T+G +G++NGL++
Sbjct: 315 DASTFTEKTALSAVDFEGIFQQKLAQYGFLKEQTYADILNEQVYVETQGEIVGQINGLSV 374
Query: 785 I---------GEQSGIVLPIE---AIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIK 832
I GE S I ++ V K E + GK IA+ + N+ +
Sbjct: 375 IEYPGTPVCFGEPSRISCIVQFGDGEVIDVERKNELAGNIHGKGMMIAQACLSNILDLPS 434
Query: 833 RYKGEDISRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGE 892
+ + + F Q+Y ++GDSAS+++ ++SAL ++P+ Q +A+TGS+ G
Sbjct: 435 QLP------FSASLVFEQSYGEIDGDSASLAIFCVLVSALADLPLPQHIAITGSIDQFGL 488
Query: 893 VLPVGGVTPKIEAAIE-------AGIKKVIIPKANEKDVFLSPDKREKIE-----IIPVE 940
V VGGV KIE G + VIIP + + LS D + ++ I PVE
Sbjct: 489 VHSVGGVNDKIEGFFTICQRRGLTGKQGVIIPMTTIQQLSLSDDVKSAVKNGEFFIYPVE 548
Query: 941 RIDEVLEV 948
I + E+
Sbjct: 549 DIYQACEL 556
>sp|O84348|LON_CHLTR ATP-DEPENDENT PROTEASE LA >gi|7428231|pir||C71527 endopeptidase La
(EC 3.4.21.53) - Chlamydia trachomatis (serotype D,
strain UW3/Cx) >gi|3328764|gb|AAC67939.1| (AE001307) Lon
ATP-dependent protease [Chlamydia trachomatis]
Length = 819
Score = 75.7 bits (183), Expect = 2e-12
Identities = 97/388 (25%), Positives = 169/388 (43%), Gaps = 42/388 (10%)
Query: 577 VLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDT 636
V+ IDE+ + +A+ E P + L VR + FIL A LD+
Sbjct: 455 VIMIDEVDKIGSSYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFILTA-NVLDS 513
Query: 637 IEKMHPALRS----RIRGYGYEVYMRTTMPDTVENRRKLVQFVAQEVKKDGRIPHFTRDA 692
I P L R+ GY E ++ V RK + AQ V F +A
Sbjct: 514 IPD--PLLDRMEVLRLSGYILEEKLQIATKYLVPRARKEMGLSAQNVT-------FQPEA 564
Query: 693 VEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALQMAKPLE 752
++ +I R AG + TL ++ V+R V+ +K ++++ K L+
Sbjct: 565 LKHMINNYAREAGVR---TLN-ENIKKVLRKVALKIVQNQEKNLSKKSRFTITP--KNLQ 618
Query: 753 KQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIV 812
L + Y E +G GLA G L IE++ P++S + + +
Sbjct: 619 DYLGKPVFSSDRFY-----EKTPVGVATGLAWTS-LGGATLYIESVQVPSSSGK-ADMHL 671
Query: 813 TGKLGEIAREAVLNVSAIIKRYKGEDISRY----------DIHVQFLQTYEGVEGDSASI 862
TG+ G++ +E+ S I Y + RY +H+ + +G SA I
Sbjct: 672 TGQAGDVMKES----SQIAWTYLHSALERYAPGQPFFEKSQVHIHIPEGATPKDGPSAGI 727
Query: 863 SVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEK 922
++ T+++S L ++PV ++ MTG L++ G VL +GG+ K+ AA + + +I P+ N +
Sbjct: 728 TMVTSLLSLLLDVPVLNNLGMTGELTLTGRVLGIGGIREKLIAARRSKLNILIFPEDNRR 787
Query: 923 DVFLSPDKREK-IEIIPVERIDEVLEVA 949
D P +K +++ V D+V ++A
Sbjct: 788 DYDELPAYLKKGLKVHFVTHYDDVFKIA 815
>sp|P78025|LON_MYCPN ATP-DEPENDENT PROTEASE LA >gi|2146077|pir||S73830 endopeptidase La
(EC 3.4.21.53) - Mycoplasma pneumoniae (strain ATCC
29342) >gi|1674198|gb|AAB96152.1| (AE000050)
ATP-dependent protease Lon [Mycoplasma pneumoniae]
Length = 795
Score = 75.3 bits (182), Expect = 3e-12
Identities = 74/275 (26%), Positives = 129/275 (46%), Gaps = 31/275 (11%)
Query: 678 EVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVT 737
E+K D FT + + II+ R AG +R L +++ + +K
Sbjct: 539 EIKTDDL--KFTDEGISYIIKFYTREAG--------VRQLERLIQQIVRKYIVNLQKTGE 588
Query: 738 REDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEA 797
++ V++ + K L+K++ D+ +R E G VNG+A G +LPIE
Sbjct: 589 QQVVVDVDLVKKYLKKEIFDY---------TVRDEDALPGIVNGMAYT-PTGGDLLPIE- 637
Query: 798 IVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIK------RYKGEDISRYDIHVQFLQT 851
V A K G +I+TG L + RE+ +K + DI++
Sbjct: 638 -VTHVAGK--GDLILTGNLKQTMRESASVALGYVKANAQSFNINPNLFKKVDINIHVPGG 694
Query: 852 YEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGI 911
+G SA ++ TA+IS+L V +AMTG +++RG+V+ +GGV K +A G+
Sbjct: 695 GIPKDGPSAGAALVTAIISSLTGKKVDPKIAMTGEITLRGKVMTIGGVKEKTISAYRGGV 754
Query: 912 KKVIIPKANEKDVFLSP-DKREKIEIIPVERIDEV 945
+ + +P+ NE+ + P D + +EII V+ ++
Sbjct: 755 RTIFMPEKNERYLDEVPKDIVKDLEIILVKEYKDI 789
>pir||E81681 proteinase, Lon family TC0623 [imported] - Chlamydia muridarum
(strain Nigg) >gi|7190663|gb|AAF39454.1| (AE002331)
protease, Lon family [Chlamydia muridarum]
Length = 819
Score = 75.3 bits (182), Expect = 3e-12
Identities = 97/388 (25%), Positives = 168/388 (43%), Gaps = 42/388 (10%)
Query: 577 VLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDT 636
V+ IDE+ + +A+ E P + L VR + FIL A LD+
Sbjct: 455 VIMIDEVDKIGSSYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFILTA-NVLDS 513
Query: 637 IEKMHPALRS----RIRGYGYEVYMRTTMPDTVENRRKLVQFVAQEVKKDGRIPHFTRDA 692
I P L R+ GY E ++ V RK + AQ V F +A
Sbjct: 514 IPD--PLLDRMEVLRLSGYILEEKLQIATKYLVPRARKEMGLSAQNVS-------FQPEA 564
Query: 693 VEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALQMAKPLE 752
++ +I R AG + TL ++ V+R V+ +K +++ K L+
Sbjct: 565 LKHMINNYAREAGVR---TLN-ENIKKVLRKVALKIVQNQEKNPSKKSRFTITP--KNLQ 618
Query: 753 KQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIV 812
L + Y E +G GLA G L IE++ P++S + + +
Sbjct: 619 DYLGKPIFSSDRFY-----EKTPVGVATGLAWTS-LGGATLYIESVQVPSSSGK-ADMHL 671
Query: 813 TGKLGEIAREAVLNVSAIIKRYKGEDISRY----------DIHVQFLQTYEGVEGDSASI 862
TG+ G++ +E+ S I Y + RY +H+ + +G SA I
Sbjct: 672 TGQAGDVMKES----SQIAWTYLHSALERYAPGRPFFEKSQVHIHIPEGATPKDGPSAGI 727
Query: 863 SVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEK 922
++ T+++S L ++PV ++ MTG L++ G VL +GG+ K+ AA + + +I P+ N +
Sbjct: 728 TMVTSLLSLLLDVPVLNNLGMTGELTLTGRVLGIGGIREKLIAARRSKLNVLIFPEDNRR 787
Query: 923 DVFLSPDKREK-IEIIPVERIDEVLEVA 949
D P +K +++ V D+V ++A
Sbjct: 788 DYDELPAYLKKGLKVHFVTHYDDVFKIA 815
>gb|AAF26081.1|AC012393_7 (AC012393) putative mitochondrial LON ATP-dependent protease
[Arabidopsis thaliana]
Length = 942
Score = 74.5 bits (180), Expect = 5e-12
Identities = 61/219 (27%), Positives = 112/219 (50%), Gaps = 14/219 (6%)
Query: 740 DVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIV 799
+V E ++ E L+D Y+ + + E +G V GLA G L IE
Sbjct: 724 EVAETVEKYMIDESNLSD-YVGKPVFQEEKIYEQTPVGVVMGLAWTS-MGGSTLYIETTF 781
Query: 800 APAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDI--------SRYDIHVQFLQT 851
+ +G + +TG+LG++ +E+ + +R E S+ +HV T
Sbjct: 782 VEEG-EGKGGLHITGRLGDVMKESAEIAHTVARRIMLEKEPENKLFANSKLHLHVPAGAT 840
Query: 852 YEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGI 911
+ +G SA ++ T+++S + PVR+D+AMTG +++ G +L +GGV K AA + +
Sbjct: 841 PK--DGPSAGCTMITSLLSLALKKPVRKDLAMTGEVTLTGRILAIGGVKEKTIAARRSQV 898
Query: 912 KKVIIPKANEKDV-FLSPDKREKIEIIPVERIDEVLEVA 949
K +I P+AN +D L+ + +E +E+ V+ +++ E+A
Sbjct: 899 KVIIFPEANRRDFDELARNVKEGLEVHFVDEYEQIFELA 937
>pir||F83549 probable ATP-dependent proteinase PA0779 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946668|gb|AAG04168.1|AE004512_11 (AE004512)
probable ATP-dependent protease [Pseudomonas aeruginosa]
Length = 799
Score = 74.5 bits (180), Expect = 5e-12
Identities = 72/240 (30%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 719 GVVRAAGDIAVRKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEG--GEI 776
G R AG + K + R+ V++ L+ + K + +E V R+E I
Sbjct: 562 GYAREAGVRQLEKQLGKLVRKSVVKLLEDPESKVK-IGPRDLEDYLGMPVFRSEQVLSGI 620
Query: 777 GRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIARE----AVLNVSAIIK 832
G + GLA G LPIEA ++ +TG+LG++ +E A + + +K
Sbjct: 621 GVITGLAWTS-MGGATLPIEATRIHTLNRG---FKLTGQLGDVMKESAEIAYSYIGSHLK 676
Query: 833 RYKGEDISRYDIHVQFLQTYEGV---EGDSASISVATAVISALEEIPVRQDVAMTGSLSV 889
+Y G D + +D L EG +G SA +++A+A++S ++ VAMTG L++
Sbjct: 677 KYGG-DPTFFDQAFVHLHVPEGATPKDGPSAGVTMASALLSLARNQVPKKGVAMTGELTL 735
Query: 890 RGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDVFLSPD-KREKIEIIPVERIDEVLEV 948
G+VLP+GGV K+ AA I ++I+P+AN PD RE + + +R +V +V
Sbjct: 736 TGQVLPIGGVREKVIAARRQKIFELILPEANRGHFEELPDYLREGLTVHFAKRYGDVAKV 795
>gb|AAF26080.1|AC012393_6 (AC012393) putative mitochondrial LON ATP-dependent protease
[Arabidopsis thaliana]
Length = 924
Score = 74.1 bits (179), Expect = 7e-12
Identities = 80/318 (25%), Positives = 146/318 (45%), Gaps = 28/318 (8%)
Query: 643 ALRSRIRGYGYEVYMRTTMPDTVENRRKLVQFVAQEVKKDGRIPHFTRDAVE-EIIREAQ 701
AL S I Y E +R + RK VA E+ + G + D + + + +
Sbjct: 619 ALLSLIENYCREAGVRNLQKQIEKIYRK----VALELVRQGAVSFDVTDTKDTKSLAKTD 674
Query: 702 RRAGRKGHLTLRLRDLGGVVRAA-GDIAVRKGKKYVTREDVLEALQMAKPL--EKQLADW 758
R +++ D+ ++ +A GD K T++ L A K + E LAD
Sbjct: 675 SEVKR-----MKVADIMKILESATGDSTESK-----TKQSGLVAKTFEKVMIDESNLAD- 723
Query: 759 YIERKKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGE 818
Y+ + + E +G V GLA G L IE + G + +TG+LG+
Sbjct: 724 YVGKPVFQEEKIYEQTPVGVVMGLAWTS-MGGSTLYIETTFVEEGLGKGG-LHITGQLGD 781
Query: 819 IAREAVLNVSAIIKRYKGED------ISRYDIHVQFLQTYEGVEGDSASISVATAVISAL 872
+ +E+ + +R E + +H+ + +G SA ++ T+ +S
Sbjct: 782 VMKESAQIAHTVARRIMFEKEPENLFFANSKLHLHVPEGATPKDGPSAGCTMITSFLSLA 841
Query: 873 EEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDV-FLSPDKR 931
+ VR+D+AMTG +++ G +LP+GGV K AA + IK +I P+AN +D L+ + +
Sbjct: 842 MKKLVRKDLAMTGEVTLTGRILPIGGVKEKTIAARRSQIKTIIFPEANRRDFEELAENMK 901
Query: 932 EKIEIIPVERIDEVLEVA 949
E +++ V+ +++ ++A
Sbjct: 902 EGLDVHFVDEYEKIFDLA 919
>sp|P93648|LON2_MAIZE MITOCHONDRIAL LON PROTEASE HOMOLOG 2 PRECURSOR
>gi|7428222|pir||T04325 probable ATP-dependent
proteinase LON2 (EC 3.4.21.-), mitochondrial - maize
>gi|1816588|gb|AAC50021.1| (U85495) LON2 [Zea mays]
Length = 964
Score = 73.7 bits (178), Expect = 9e-12
Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 17/185 (9%)
Query: 776 IGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGK--IIVTGKLGEIAREAVL---NVSAI 830
+G V GLA G L IE + EGK +++TG+LG++ +E+ V
Sbjct: 776 VGVVMGLAWTA-MGGSTLYIET---KKVEEREGKGALVLTGQLGDVMKESAQIAHTVGRA 831
Query: 831 IKRYKGEDI-----SRYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTG 885
+ K D S+ +HV T + +G SA ++ T+++S PV++D+AMTG
Sbjct: 832 VLLEKEPDNHFFANSKVHLHVPAGSTPK--DGPSAGCTMITSMLSLAMGKPVKKDLAMTG 889
Query: 886 SLSVRGEVLPVGGVTPKIEAAIEAGIKKVIIPKANEKDV-FLSPDKREKIEIIPVERIDE 944
+++ G +LP+GGV K AA + IK +I P AN++D L+ + +E +E+ V+ E
Sbjct: 890 EVTLTGRILPIGGVKEKTIAARRSAIKTLIFPAANKRDFDELASNVKEGLEVHFVDTYSE 949
Query: 945 VLEVA 949
+ ++A
Sbjct: 950 IYDLA 954
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.139 0.388
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 357973329
Number of Sequences: 2977
Number of extensions: 15906041
Number of successful extensions: 49336
Number of sequences better than 1.0e-10: 85
Number of HSP's better than 0.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 49052
Number of HSP's gapped (non-prelim): 189
length of query: 998
length of database: 189,106,746
effective HSP length: 61
effective length of query: 937
effective length of database: 152,599,039
effective search space: 142985299543
effective search space used: 142985299543
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 170 (70.6 bits)