BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1314 (PAB1314) DE:HYALURONAN SYNTHASE RELATED
(350 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75005 hyaluronan synthase related PAB1314 - Pyrococcus aby... 685 0.0
pir||A71157 hypothetical protein PH0456 - Pyrococcus horikoshii ... 470 e-131
emb|CAB72208.1| (AL138851) putative bi-functional transferase/de... 137 2e-31
pir||T34632 probable bi-functional transferase/deacetylase - Str... 136 4e-31
sp|P75905|YCDQ_ECOLI HYPOTHETICAL 50.8 KDA PROTEIN IN PHOH-CSGG ... 119 6e-26
pir||S77608 probable intercellular adhesion protein A - Staphylo... 110 3e-23
gb|AAD52055.1|AF086783_3 (AF086783) IcaA [Staphylococcus aureus] 107 2e-22
pir||S18962 FBF15 protein - Stigmatella aurantiaca >gi|46578|emb... 107 2e-22
pir||D69769 cellulose synthase homolog ydaM - Bacillus subtilis ... 102 8e-21
dbj|BAB05950.1| (AP001514) unknown conserved protein in others [... 98 1e-19
gb|AAB66590.1| (U22837) HmsR [Yersinia pestis] 98 1e-19
pir||T47005 hypothetical protein hmsR [imported] - Yersinia pest... 98 1e-19
gb|AAB87874.1| (AF023876) hyaluronan synthase [Streptococcus equ... 94 2e-18
pir||A53100 hyaluronate synthase A (HasA) - Streptococcus sp. (g... 94 3e-18
gi|10956340 pXO1-93 [Bacillus anthracis] >gi|7474334|pir||E59102... 93 5e-18
sp|Q54865|HASA_STRPY HYALURONAN SYNTHASE (HYALURONATE SYNTHASE) ... 92 1e-17
gb|AAA17982.1| (L20853) hyaluronan synthase [Streptococcus pyoge... 92 1e-17
pir||A48755 hyaluronan synthase (EC 2.4.1.-) - Streptococcus pyo... 92 1e-17
gb|AAA17983.1| (L20853) hyaluronan synthase [Streptococcus pyoge... 92 1e-17
emb|CAC05896.1| (AL391754) putative glycosyltransferase [Strepto... 90 3e-17
gb|AAK43339.1| Glycosyltransferase, putative [Sulfolobus solfata... 90 3e-17
emb|CAB46918.2| (AJ242946) hyaluronan synthase [Streptococcus ub... 87 4e-16
pir||E83022 probable glycosyl transferase PA5000 [imported] - Ps... 86 7e-16
pir||A75176 dolichyl-phosphate mannose synthase related protein ... 82 8e-15
gb|AAB24745.1| NodC=polysaccharide polymerizing enzyme homolog [... 80 5e-14
sp|P33697|EXOO_RHIME SUCCINOGLYCAN BIOSYNTHESIS PROTEIN EXOO >gi... 80 5e-14
pir||S39958 exoO protein - Rhizobium meliloti (strain 2011) >gi|... 80 5e-14
pir||G70463 dolichol-phosphate mannosyltransferase - Aquifex aeo... 79 7e-14
gb|AAC60770.1| (U46859) WbcG [Yersinia enterocolitica (type 0:8)] 78 2e-13
sp|Q57022|Y868_HAEIN PUTATIVE GLYCOSYL TRANSFERASE HI0868 >gi|10... 78 2e-13
pir||B83557 probable glycosyl transferase PA0705 [imported] - Ps... 78 2e-13
gb|AAC44786.1| (U70729) MigA [Pseudomonas aeruginosa] 77 3e-13
pir||D71038 hypothetical protein PH1596 - Pyrococcus horikoshii ... 77 3e-13
gb|AAF18946.1|AF155804_7 (AF155804) Cps1K [Streptococcus suis] 77 3e-13
sp|P22639|YHET_ANASP HYPOTHETICAL PROTEIN IN HETA 3'REGION >gi|9... 77 3e-13
gb|AAK42537.1| Glucosaminyltransferase, intercellular adhesion p... 76 4e-13
pir||ZZZRC4 nodulation protein nodC - Rhizobium meliloti (strain... 76 6e-13
emb|CAA25811.1| (X01649) open reading frame (pot. nodC gene) (aa... 76 6e-13
sp|P04341|NODC_RHIME N-ACETYLGLUCOSAMINYLTRANSFERASE (NODULATION... 76 6e-13
gb|AAB95329.1| (AF038577) NodC [Sinorhizobium meliloti] 76 6e-13
gb|AAD24457.1|AF118389_14 (AF118389) Cps2K [Streptococcus suis] 76 6e-13
emb|CAA69119.1| (Y07786) sugar transferase [Vibrio cholerae] 76 8e-13
dbj|BAA33603.1| (AB012956) probable glycosyl transferase [Vibrio... 76 8e-13
gb|AAD50485.1|AF172324_3 (AF172324) WbnA [Escherichia coli] 76 8e-13
pir||G75099 sugar transferase related protein PAB0796 - Pyrococc... 75 1e-12
pir||G71148 probable glycosyl transferase - Pyrococcus horikoshi... 75 1e-12
gb|AAG19465.1| (AE005039) rhamnosyl transferase; RfbQ [Halobacte... 75 2e-12
pir||A69728 biosynthesis of teichuronic acid tuaG - Bacillus sub... 74 3e-12
emb|CAA04445.1| (AJ000993) hypothetical protein [Lactococcus lac... 74 3e-12
pir||G75191 dolichol-phosphate mannosyltransferase PAB2307 - Pyr... 74 3e-12
pir||T44647 glycosyl transferase cpsJ [imported] - Streptococcus... 73 5e-12
pir||S75693 hypothetical protein sll1377 - Synechocystis sp. (st... 72 1e-11
pir||B75096 glycosyl transferase PAB0772 - Pyrococcus abyssi (st... 72 1e-11
gb|AAF18945.1|AF155804_6 (AF155804) Cps1J [Streptococcus suis] 72 1e-11
pir||G83517 probable glycosyl transferase PA1014 [imported] - Ps... 71 1e-11
pir||T50039 beta-1,4-galactosyltransferase cps14J [validated] - ... 71 2e-11
gb|AAC38751.1| (AF030373) galactosyl transferase [Streptococcus ... 71 3e-11
gb|AAD47916.1|AF127522_3 (AF127522) putative beta-glycosyltransf... 71 3e-11
pir||F81289 probable sugar transferase Cj1438c [imported] - Camp... 71 3e-11
pir||H81970 lacto-N-neotetraose biosynthesis glycosyl transferas... 71 3e-11
pir||S75492 spore coat polysaccharide biosynthesis protein spsA ... 70 3e-11
dbj|BAA33749.1| (AB017355) N-acetylglucosaminyltransferase [Stre... 70 3e-11
pir||B81289 probable sugar transferase Cj1434c [imported] - Camp... 70 4e-11
gb|AAC44016.1| (U40830) EpsI [Streptococcus thermophilus] >gi|15... 70 4e-11
pir||C69052 conserved hypothetical protein MTH1392 - Methanobact... 70 4e-11
pir||S49240 hypothetical protein 3 (capsulation locus) - Haemoph... 69 6e-11
pir||B69218 conserved hypothetical protein MTH884 - Methanobacte... 69 6e-11
dbj|BAB07376.1| (AP001519) glycosyltransferase [Bacillus halodur... 69 6e-11
gb|AAA68009.1| (U14554) glycosyl transferase [Neisseria gonorrho... 69 7e-11
pir||H71223 probable dolichol-phosphate mannosyltransferase - Py... 69 1e-10
dbj|BAA84086.1| (AB032065) hypothetical protein [Streptomyces co... 69 1e-10
emb|CAB61873.1| (AL133252) hypothetical protein SCE46.22 [Strept... 69 1e-10
gb|AAF31770.1|AF130984_6 (AF130984) beta-1,3-galactosyltransfera... 69 1e-10
emb|CAB87331.1| (AL163672) putative glycosyl transferase [Strept... 69 1e-10
>pir||G75005 hyaluronan synthase related PAB1314 - Pyrococcus abyssi (strain
Orsay) >gi|5458999|emb|CAB50485.1| (AJ248288) HYALURONAN
SYNTHASE RELATED [Pyrococcus abyssi]
Length = 350
Score = 685 bits (1748), Expect = 0.0
Identities = 350/350 (100%), Positives = 350/350 (100%)
Query: 1 MRLELLLLIIFIWDGYFFLRYLLGLLKEYKTVSWKPKVSVIIPAYNEEENIKKAIKAALS 60
MRLELLLLIIFIWDGYFFLRYLLGLLKEYKTVSWKPKVSVIIPAYNEEENIKKAIKAALS
Sbjct: 1 MRLELLLLIIFIWDGYFFLRYLLGLLKEYKTVSWKPKVSVIIPAYNEEENIKKAIKAALS 60
Query: 61 QDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIRIEHKGKAGAINEGLKLAKGEVIVVT 120
QDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIRIEHKGKAGAINEGLKLAKGEVIVVT
Sbjct: 61 QDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIRIEHKGKAGAINEGLKLAKGEVIVVT 120
Query: 121 DADSFMSRDAVRRLVERFHSEDVVAVGGQIRVIVDSFLAFIQDIEHLRIAMYRRAKELED 180
DADSFMSRDAVRRLVERFHSEDVVAVGGQIRVIVDSFLAFIQDIEHLRIAMYRRAKELED
Sbjct: 121 DADSFMSRDAVRRLVERFHSEDVVAVGGQIRVIVDSFLAFIQDIEHLRIAMYRRAKELED 180
Query: 181 LTLAPGPLSAFRREALERIGGFVNSLVEDYATTKALKKFGKVVYSPKAKLFTRMPLTLGE 240
LTLAPGPLSAFRREALERIGGFVNSLVEDYATTKALKKFGKVVYSPKAKLFTRMPLTLGE
Sbjct: 181 LTLAPGPLSAFRREALERIGGFVNSLVEDYATTKALKKFGKVVYSPKAKLFTRMPLTLGE 240
Query: 241 LWRQRRRWFLGDLSHVDAKDIIMLILGDIIAFLDIFLPVIFIKYGAFALLLLFILFEILT 300
LWRQRRRWFLGDLSHVDAKDIIMLILGDIIAFLDIFLPVIFIKYGAFALLLLFILFEILT
Sbjct: 241 LWRQRRRWFLGDLSHVDAKDIIMLILGDIIAFLDIFLPVIFIKYGAFALLLLFILFEILT 300
Query: 301 MLVPVIFEGGSITEALLFPIALMFLASFYLSLHIYGYAVTLKNKISQLFS 350
MLVPVIFEGGSITEALLFPIALMFLASFYLSLHIYGYAVTLKNKISQLFS
Sbjct: 301 MLVPVIFEGGSITEALLFPIALMFLASFYLSLHIYGYAVTLKNKISQLFS 350
>pir||A71157 hypothetical protein PH0456 - Pyrococcus horikoshii
>gi|3256859|dbj|BAA29542.1| (AP000002) 314aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 314
Score = 470 bits (1197), Expect = e-131
Identities = 222/302 (73%), Positives = 271/302 (89%)
Query: 38 VSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIRIE 97
+S+IIPAYNEEENIK+AIKAALSQDYPV EVIVVDDGSEDGTYE+AKE+KD R+KV++I+
Sbjct: 1 MSIIIPAYNEEENIKRAIKAALSQDYPVSEVIVVDDGSEDGTYERAKEIKDHRLKVLKID 60
Query: 98 HKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVIVDSF 157
H+GKAGAINEGLK+AKG VIV TDADSFMS+DAVRRLVERF+S+DVVAVGGQIRVIV+SF
Sbjct: 61 HRGKAGAINEGLKIAKGSVIVTTDADSFMSKDAVRRLVERFYSDDVVAVGGQIRVIVESF 120
Query: 158 LAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIGGFVNSLVEDYATTKALK 217
+ +QDIEHLRIAMYRR KELE+L+LAPGPLSAFRR+ LE+IGG S+VEDYATTK +K
Sbjct: 121 MTLVQDIEHLRIAMYRRGKELENLSLAPGPLSAFRRDVLEKIGGIQRSIVEDYATTKIVK 180
Query: 218 KFGKVVYSPKAKLFTRMPLTLGELWRQRRRWFLGDLSHVDAKDIIMLILGDIIAFLDIFL 277
K+G+VVY+PKAKL+TRMP+TL +LWRQR+RWFLGDL H + D++ L+LGD+IA LD+ L
Sbjct: 181 KYGRVVYAPKAKLYTRMPITLRDLWRQRKRWFLGDLQHHNLNDLLNLLLGDVIALLDVIL 240
Query: 278 PVIFIKYGAFALLLLFILFEILTMLVPVIFEGGSITEALLFPIALMFLASFYLSLHIYGY 337
P IF+ G++ LL F++FE++TM++ VI+EGGS+ EALLFP+ L FLA FYLSLH+YGY
Sbjct: 241 PFIFLLEGSYLPLLAFVMFEVITMVIAVIWEGGSLIEALLFPVVLWFLALFYLSLHLYGY 300
Query: 338 AV 339
AV
Sbjct: 301 AV 302
>emb|CAB72208.1| (AL138851) putative bi-functional transferase/deacetylase
[Streptomyces coelicolor A3(2)]
Length = 734
Score = 137 bits (341), Expect = 2e-31
Identities = 87/224 (38%), Positives = 131/224 (57%), Gaps = 6/224 (2%)
Query: 38 VSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIRIE 97
V+V++PAYNE + I+ +++ ++ D+PVE VIV+DDGS DGT + + V+VIR
Sbjct: 362 VTVLVPAYNEAKCIENTVRSLVASDHPVE-VIVIDDGSSDGTARIVEGLGLPGVRVIRQL 420
Query: 98 HKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRV-IVDS 156
+ GK A+N GL A+ +++V+ D D+ VR LV+ F V AV G +V DS
Sbjct: 421 NAGKPAALNRGLANARYDIVVMMDGDTVFEPSTVRELVQPFGDPRVGAVAGNAKVGNKDS 480
Query: 157 FLAFIQDIEH-LRIAMYRRAKE-LEDLTLAPGPLSAFRREALERIGGFV-NSLVEDYATT 213
+ Q IE+ + + RR + L + PG + AFRR ALE IGG ++L ED T
Sbjct: 481 LIGAWQHIEYVMGFNLDRRMYDVLGCMPTIPGAVGAFRRSALEPIGGMSDDTLAEDTDVT 540
Query: 214 KALKKFG-KVVYSPKAKLFTRMPLTLGELWRQRRRWFLGDLSHV 256
AL + G +VVY+ A+ +T P ++G+LW QR RW G + +
Sbjct: 541 MALHRAGWRVVYAENARAWTEAPESVGQLWSQRYRWSYGTMQAI 584
>pir||T34632 probable bi-functional transferase/deacetylase - Streptomyces
coelicolor >gi|5042285|emb|CAB44539.1| (AL078618)
putative bi-functional transferase/deacetylase
[Streptomyces coelicolor]
Length = 743
Score = 136 bits (339), Expect = 4e-31
Identities = 88/232 (37%), Positives = 131/232 (55%), Gaps = 14/232 (6%)
Query: 33 SWKPKV----SVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKD 88
SW P V SVI+PAYNE+E I+ +++ +PVE +IVVDDGS DGT + A+ +
Sbjct: 380 SWGPPVTGPVSVIVPAYNEKECIEATLRSLARSTHPVE-IIVVDDGSTDGTADIAESLGL 438
Query: 89 ERVKVIRIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGG 148
V+V+R + GK A+N G++ A+ +++V+ D D+ D VR LV+ F V AV G
Sbjct: 439 PGVRVVRQANAGKPAALNNGVRHARYDIVVMMDGDTVFEPDTVRHLVQPFADPSVGAVAG 498
Query: 149 QIRVIVDSFLAFIQDIEHLRIAM-YRRAKELEDL----TLAPGPLSAFRREALERIGGFV 203
+ V + I +H+ M + + + DL PG + AFRREA+ + GG
Sbjct: 499 NAK--VGNRRTLIGAWQHIEYVMGFNLDRRMYDLLRCMPTIPGAIGAFRREAVLQAGGMS 556
Query: 204 -NSLVEDYATTKALKKFG-KVVYSPKAKLFTRMPLTLGELWRQRRRWFLGDL 253
++L ED T AL + G +VVY A+ +T P +LG+LW QR RW G +
Sbjct: 557 DDTLAEDTDITIALHRAGWRVVYEEHARAWTEAPGSLGQLWSQRYRWSYGTM 608
>sp|P75905|YCDQ_ECOLI HYPOTHETICAL 50.8 KDA PROTEIN IN PHOH-CSGG INTERGENIC REGION
>gi|7451878|pir||D64844 probable gylcosyltransferase
ycdQ - Escherichia coli >gi|1787259|gb|AAC74107.1|
(AE000204) orf, hypothetical protein [Escherichia coli
K12] >gi|4062586|dbj|BAA35803.1| (D90739) Glycosyl
transferase (lgtD) homolog [Escherichia coli]
Length = 441
Score = 119 bits (295), Expect = 6e-26
Identities = 105/357 (29%), Positives = 172/357 (47%), Gaps = 27/357 (7%)
Query: 4 ELLLLIIFIWDGYFFLRYLLG--LLKEYKTVSW-------------KPKVSVIIPAYNEE 48
EL++ +F W + + +++G Y+ W P +S+IIP +NEE
Sbjct: 28 ELMMRFVFFWPFFMSIMWIVGGVYFWVYRERHWPWGENAPAPQLKDNPSISIIIPCFNEE 87
Query: 49 ENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDE--RVKVIRI-EHKGKAGAI 105
+N+++ I AAL+Q Y EVI V+DGS D T + + ++VI + +++GKA A+
Sbjct: 88 KNVEETIHAALAQRYENIEVIAVNDGSTDKTRAILDRMAAQIPHLRVIHLAQNQGKAIAL 147
Query: 106 NEGLKLAKGEVIVVTDADSFMSRDAVRRLVE-RFHSEDVVAVGGQIRVIVDSFL-AFIQD 163
G AK E +V D D+ + RDA +VE ++ V AV G R+ S L IQ
Sbjct: 148 KTGAAAAKSEYLVCIDGDALLDRDAAAYIVEPMLYNPRVGAVTGNPRIRTRSTLVGKIQV 207
Query: 164 IEHLR-IAMYRRAKEL-EDLTLAPGPLSAFRREALERIGGFVNSLV-EDYATTKALK-KF 219
E+ I + +R + + ++ G ++AFRR AL +G + + ++ ED + L+
Sbjct: 208 GEYSSIIGLIKRTQRIYGNVFTVSGVIAAFRRSALAEVGYWSDDMITEDIDISWKLQLNQ 267
Query: 220 GKVVYSPKAKLFTRMPLTLGELWRQRRRWFLGDLSHVDAKDIIMLILGDIIAFLDIFLPV 279
+ Y P+A + MP TL LW+QR RW G + V K++ L + +F
Sbjct: 268 WTIFYEPRALCWILMPETLKGLWKQRLRWAQGG-AEVFLKNMTRLWRKENFRMWPLFFEY 326
Query: 280 IFIKYGAFALLLLFILFEILTMLVPVIFEGGSI--TEALLFPIALMFLASFYLSLHI 334
AF L+ FI++ + VP+ E I T + + L F +SL I
Sbjct: 327 CLTTIWAFTCLVGFIIYAVQLAGVPLNIELTHIAATHTAGILLCTLCLLQFIVSLMI 383
>pir||S77608 probable intercellular adhesion protein A - Staphylococcus
epidermidis >gi|1161380|gb|AAC06117.1| (U43366) IcaA
[Staphylococcus epidermidis]
Length = 412
Score = 110 bits (272), Expect = 3e-23
Identities = 73/222 (32%), Positives = 123/222 (54%), Gaps = 8/222 (3%)
Query: 38 VSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV-KDERVKVIRI 96
+S ++ YNE E ++ + + LS +YP +E+I+++DGS D T E + K+ K + +
Sbjct: 49 ISFLLACYNESETVQDTLSSVLSLEYPEKEIIIINDGSSDNTAEIIYDFKKNHDFKFVDL 108
Query: 97 E-HKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVV-AVGGQIRV-I 153
E ++GKA A+NEG+K A E ++ DAD+ + DA ++E F + AV G R+
Sbjct: 109 EVNRGKANALNEGIKQASYEYVMCLDADTVIDDDAPFYMIEDFKKNPKLGAVTGNPRIRN 168
Query: 154 VDSFLAFIQDIEHLR-IAMYRRAKELED-LTLAPGPLSAFRREALERIGGF-VNSLVEDY 210
S L IQ IE+ I +R++ L + G + F++ AL+ +G + + + ED
Sbjct: 169 KSSILGKIQTIEYASIIGCIKRSQSLAGAINTISGVFTLFKKSALKDVGYWDTDMITEDI 228
Query: 211 ATTKALKKFG-KVVYSPKAKLFTRMPLTLGELWRQRRRWFLG 251
A + L F ++ Y P+A + +P T+G LW+QR RW G
Sbjct: 229 AVSWKLHLFDYEIKYEPRALCWMLVPETIGGLWKQRVRWAQG 270
>gb|AAD52055.1|AF086783_3 (AF086783) IcaA [Staphylococcus aureus]
Length = 412
Score = 107 bits (265), Expect = 2e-22
Identities = 77/265 (29%), Positives = 139/265 (52%), Gaps = 18/265 (6%)
Query: 38 VSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDER--VKVIR 95
++ ++ YNE E I+ + L+ Y +E+I+++DGS D T E ++K+ + V
Sbjct: 49 ITFLLACYNESETIEDTLSNVLALKYEKKEIIIINDGSSDNTAELIYKIKENNDFIFVDL 108
Query: 96 IEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERF-HSEDVVAVGGQIRV-I 153
E++GKA A+N+G+K A + ++ DAD+ + +DA ++E F H + AV G R+
Sbjct: 109 QENRGKANALNQGIKQASYDYVMCLDADTIVDQDAPYYMIENFKHDPKLGAVTGNPRIRN 168
Query: 154 VDSFLAFIQDIEHLR-IAMYRRAKELED-LTLAPGPLSAFRREALERIGGF-VNSLVEDY 210
S L IQ IE+ I +R++ L + G + F++ A+ +G + + + ED
Sbjct: 169 KSSILGKIQTIEYASLIGCIKRSQTLAGAVNTISGVFTLFKKSAVVDVGYWDTDMITEDI 228
Query: 211 ATTKALKKFG-KVVYSPKAKLFTRMPLTLGELWRQRRRWFLGD--------LSHVDAK-- 259
A + L G ++ Y P A + +P TLG LW+QR RW G S + K
Sbjct: 229 AVSWKLHLRGYRIKYEPLAMCWMLVPETLGGLWKQRVRWAQGGHEVLLRDFFSTMKTKRF 288
Query: 260 DIIMLILGDIIAFLDIFLPVIFIKY 284
+ +L+ II+ L +++ ++++ Y
Sbjct: 289 PLYILMFEQIISILWVYIVLLYLGY 313
>pir||S18962 FBF15 protein - Stigmatella aurantiaca >gi|46578|emb|CAA77681.1|
(Z11601) FBFA protein [Stigmatella aurantiaca]
Length = 414
Score = 107 bits (264), Expect = 2e-22
Identities = 88/287 (30%), Positives = 138/287 (47%), Gaps = 40/287 (13%)
Query: 3 LELLLLIIFIWDGYFFLRYLLGLLK--------EYKTVSWKPKVSVIIPAYNEEENIKKA 54
+++L L++ + RY+LG L + +++P V++IIP +NE E I A
Sbjct: 6 IQILFLVVLM------NRYILGPLMRRVRGDQFDATNDAYEPTVAIIIPLFNEGEGIYHA 59
Query: 55 IKAALSQDYPVEE--VIVVDDGSEDGTYEKAKEVKDERVKVIRI---EHKGKAGAINEGL 109
I++ L QDYP ++ ++VVDD S+D +Y A + ++ V+ + E+ GK IN G+
Sbjct: 60 IRSLLLQDYPPDKLSIVVVDDCSKDDSYVWALKAAEQHPNVMVMRNPENMGKRKGINRGV 119
Query: 110 KLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVIVDSFLAFIQDIEHLRI 169
+ + E+IV D+D + R AVR+LV RF + AVGG+ V + IE
Sbjct: 120 RATQSEIIVSVDSDVIVDRGAVRQLVRRFLHPRIAAVGGRTYVTNRHQNWMTRMIEIKFH 179
Query: 170 AMYRRAKELE----DLTLAPGPLSAFRREALER---------IGGFVNSLVEDYATTKAL 216
K+LE + G L+A+RR LE I G ED T+ +
Sbjct: 180 FAQEWLKDLERGFRSVMCLSGCLTAYRRHVLEELEPILEARSIAGVAIKYGEDRFLTRQI 239
Query: 217 KKFG-KVVYSPKAKLFTRMPLTLGELWRQRRRW-------FLGDLSH 255
K G + +Y+ A FT P + + Q+ RW LG LSH
Sbjct: 240 IKAGYETIYTTAAVCFTATPANIAGYFAQQLRWRRSNLVDMLGGLSH 286
>pir||D69769 cellulose synthase homolog ydaM - Bacillus subtilis
>gi|1881240|dbj|BAA19267.1| (AB001488) FUNCTION UNKNOWN,
SIMILAR PRODUCT IN MANY BACTERIA. [Bacillus subtilis]
>gi|2632730|emb|CAB12237.1| (Z99106) similar to
cellulose synthase [Bacillus subtilis]
Length = 420
Score = 102 bits (251), Expect = 8e-21
Identities = 108/388 (27%), Positives = 186/388 (47%), Gaps = 49/388 (12%)
Query: 5 LLLLIIFIWDGYF--FLRYLLGLLKEYKTVSWKPKVSVIIPAYNEEENIKKAIKAALSQD 62
+LL +F+ G F ++ + + K + + PKVSV+IPA+NEE I++ +KA ++
Sbjct: 16 MLLYHMFLMQGGFRHYMTFERNIPKWRENMKELPKVSVLIPAHNEEVVIRQTLKAMVNLY 75
Query: 63 YPVE--EVIVVDDGSEDGTYEKAKEV--KDERVKVIRIE----HKGKAGAINEGLKLAKG 114
YP + E+IVV+D S D T + E K + +K++ + KGK+ A+N G + G
Sbjct: 76 YPKDRLEIIVVNDNSSDRTGDIVNEFSEKYDFIKMVITKPPNAGKGKSSALNSGFAESNG 135
Query: 115 EVIVVTDADSFMSRDAVRRLV-ERFHSEDVVAVGGQIRVI--VDSFLAFIQDIEHL---R 168
+VI V DAD+ + AV LV + E AV G+ RVI + L +IE +
Sbjct: 136 DVICVYDADNTPEKMAVYYLVLGLMNDEKAGAVVGKFRVINAAKTLLTRFINIETICFQW 195
Query: 169 IAMYRRAKELEDLTLAPGPLSAFRREALERIGGFVN-SLVEDYATTKALKKFG-KVVYSP 226
+A R K + T+ PG A RR +E++GG+ + +L ED T + G + + P
Sbjct: 196 MAQGGRWKWFKIATI-PGTNFAIRRSIIEKLGGWDDKALAEDTELTIRVYNLGYHIRFFP 254
Query: 227 KAKLFTRMPLTLGELWRQRRRW----------FLGDLSHVDAKDIIM------------- 263
A + + P T WRQR RW FL + K II
Sbjct: 255 AAITWEQEPETWKVWWRQRTRWARGNQYVVLKFLAQFFKLKRKRIIFDLFYFFFTYFLFF 314
Query: 264 --LILGDIIAFLDIFLPVIFIKYGAFALLLLFILFEIL--TMLVPVIFEGGSITEALLFP 319
+I+ + I +++F + + G A++L + F + +++ + E + + F
Sbjct: 315 FGVIMSNAIFVVNLFYD-LHLSVGFLAMILWILAFFLFMTEVMITLSIEKTEMNKQNFFI 373
Query: 320 IALMFL--ASFYLSLHIYGYAVTLKNKI 345
+ LM+ + ++ L IY V +K+++
Sbjct: 374 VFLMYFTYSQAWIVLVIYSLFVEIKHRL 401
>dbj|BAB05950.1| (AP001514) unknown conserved protein in others [Bacillus
halodurans]
Length = 482
Score = 98.3 bits (241), Expect = 1e-19
Identities = 88/369 (23%), Positives = 156/369 (41%), Gaps = 87/369 (23%)
Query: 28 EYKTVSWKPKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEK----- 82
+Y +++ VS+++PAYNEE I + +++ LS YP E++VV+DGS D T E
Sbjct: 56 DYLELTYTKPVSILVPAYNEETGIIETVRSLLSLKYPQTEIVVVNDGSTDQTLEVIIEHF 115
Query: 83 ---------AKEVKDERVK------------VIRIEHKGKAGAINEGLKLAKGEVIVVTD 121
K+++ E +K ++ + GKA A+N GL ++K D
Sbjct: 116 QMVKVGKVIRKQIETEPIKGVYQSTIFPHLLLVDKSNGGKADALNAGLNVSKYPYFCSID 175
Query: 122 ADSFMSRDAVRRLVE-----RFHSEDVVAVGGQIRV---------------IVDSFLAFI 161
DS + DA+ ++++ R ++V+A GG +R+ + + L +
Sbjct: 176 GDSILETDALLKVMKPIVTSRDDEDEVIASGGNVRIANGSDIQMGSVLSVQLAKNPLVVM 235
Query: 162 QDIEHLRIAMYRR--AKELEDLTLAPGPLSAFRREALERIGGFVNSLVED---------- 209
Q IE+LR + R + + G S F ++ + GG+ V +
Sbjct: 236 QVIEYLRAFLMGRIGLSRHNMVLIISGAFSVFAKKWVMEAGGYSKKTVGEDMELVVRLHR 295
Query: 210 YATTKALKKFGKVVYSPKAKLFTRMPLTLGELWRQRRRWFLGDLSH-------------- 255
K LKK ++ + P +T P T L RQR RW G +
Sbjct: 296 LVKEKRLKK--RITFVPDPVCWTEAPATFRVLQRQRSRWHRGLMESLWLHRGMTFNPKYG 353
Query: 256 ------------VDAKDIIMLILGDIIAFLDIFLPVIFIKYGAFALLLLFILFEILTMLV 303
V+ ++ ++G + F +++++ A AL LLF+L+ + +
Sbjct: 354 LVGTASIPYFWIVEFFGPVVELMGYLYIVFAFFFGGLYVEF-ALALFLLFVLYGTVFSMT 412
Query: 304 PVIFEGGSI 312
VI EG S+
Sbjct: 413 AVILEGWSL 421
>gb|AAB66590.1| (U22837) HmsR [Yersinia pestis]
Length = 457
Score = 98.3 bits (241), Expect = 1e-19
Identities = 92/316 (29%), Positives = 150/316 (47%), Gaps = 23/316 (7%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYE--KAKEVKDERVKV 93
P VS+++P +NE N ++ I AAL+Q Y EVI ++DGS D T + A +D R++V
Sbjct: 88 PLVSILVPCFNEGLNARETIHAALAQTYTNIEVIAINDGSSDDTAQVLDALLAEDPRLRV 147
Query: 94 IRIEH-KGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSED-VVAVGGQIR 151
I + H +GKA A+ G A+ E +V D D+ + ++AV LV + AV G R
Sbjct: 148 IHLAHNQGKAIALRMGAAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPR 207
Query: 152 VIVDSFL---AFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIGGFVNSLV- 207
+ S L + + + + R + + G ++AFRR AL +G + ++
Sbjct: 208 IRTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALADVGYWSPDMIT 267
Query: 208 EDYATTKALK-KFGKVVYSPKAKLFTRMPLTLGELWRQRRRWFLGDLSHVDAKDIIMLIL 266
ED + L+ K V + P+ + MP TL LW+QR RW G ++ + +
Sbjct: 268 EDIDISWKLQLKHWSVFFEPRGLCWILMPETLRGLWKQRLRWAQG------GAEVFLKNM 321
Query: 267 GDIIAFLDIFLPVIFIKYGAFALLLLFILFEI-LTMLVPVIFEGGSITEALLFP------ 319
+ + + + ++F++Y LF I L +L VI I +FP
Sbjct: 322 FKLWRWRNRRMWLLFLEYSLSITWAFTYLFSITLYLLGLVITLPPGIHVQSVFPPAFTGM 381
Query: 320 -IALMFLASFYLSLHI 334
+AL L F +SL I
Sbjct: 382 VLALTCLLQFAISLVI 397
>pir||T47005 hypothetical protein hmsR [imported] - Yersinia pestis
>gi|4106593|emb|CAA21348.1| (AL031866) ORF25, len: 457
aa, hmsR, 99,8% identity with Yersinia pestis hemin
binding protein Q56941, Fasta scores opt: 3002, E(): 0
Length = 457
Score = 98.3 bits (241), Expect = 1e-19
Identities = 92/316 (29%), Positives = 150/316 (47%), Gaps = 23/316 (7%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYE--KAKEVKDERVKV 93
P VS+++P +NE N ++ I AAL+Q Y EVI ++DGS D T + A +D R++V
Sbjct: 88 PLVSILVPCFNEGLNARETIHAALAQTYTNIEVIAINDGSSDDTAQVLDALLAEDPRLRV 147
Query: 94 IRIEH-KGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSED-VVAVGGQIR 151
I + H +GKA A+ G A+ E +V D D+ + ++AV LV + AV G R
Sbjct: 148 IHLAHNQGKAIALRMGAAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPR 207
Query: 152 VIVDSFL---AFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIGGFVNSLV- 207
+ S L + + + + R + + G ++AFRR AL +G + ++
Sbjct: 208 IRTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALADVGYWSPDMIT 267
Query: 208 EDYATTKALK-KFGKVVYSPKAKLFTRMPLTLGELWRQRRRWFLGDLSHVDAKDIIMLIL 266
ED + L+ K V + P+ + MP TL LW+QR RW G ++ + +
Sbjct: 268 EDIDISWKLQLKHWSVFFEPRGLCWILMPETLRGLWKQRLRWAQG------GAEVFLKNM 321
Query: 267 GDIIAFLDIFLPVIFIKYGAFALLLLFILFEI-LTMLVPVIFEGGSITEALLFP------ 319
+ + + + ++F++Y LF I L +L VI I +FP
Sbjct: 322 FKLWRWRNRRMWLLFLEYSLSITWAFTYLFSITLYLLGLVITLPPGIHVQSVFPPAFTGM 381
Query: 320 -IALMFLASFYLSLHI 334
+AL L F +SL I
Sbjct: 382 VLALTCLLQFAISLVI 397
>gb|AAB87874.1| (AF023876) hyaluronan synthase [Streptococcus equisimilis]
Length = 417
Score = 94.0 bits (230), Expect = 2e-18
Identities = 78/262 (29%), Positives = 127/262 (47%), Gaps = 28/262 (10%)
Query: 15 GYFFLRYLLGLL------KEYKTVSWKPKVSVIIPAYNEE-ENIKKAIKAALSQDYPVEE 67
G+ + YLL + K +K + + KV+ IIP+YNE+ E++ + +K+ Q YP+ E
Sbjct: 38 GFLLIAYLLVKMSLSFFYKPFKGRAGQYKVAAIIPSYNEDAESLLETLKSVQQQTYPLAE 97
Query: 68 VIVVDDGSEDGTYEKAKE--VKD-----ERVKVIRIE-HKGKAGAINEGLKLAKGEVIVV 119
+ VVDDGS D T K E V+D V V R E ++GK A + + +V +
Sbjct: 98 IYVVDDGSADETGIKRIEDYVRDTGDLSSNVIVHRSEKNQGKRHAQAWAFERSDADVFLT 157
Query: 120 TDADSFMSRDAVRRLVERFHSEDVVAVGGQIRV--IVDSFLAFIQDIEHLRIAMYRRAKE 177
D+D+++ DA+ L++ F+ V A G + V + L + DI + RA +
Sbjct: 158 VDSDTYIYPDALEELLKTFNDPTVFAATGHLNVRNRQTNLLTRLTDIRYDNAFGVERAAQ 217
Query: 178 --LEDLTLAPGPLSAFRRE-ALERIGGFVN--------SLVEDYATTKALKKFGKVVYSP 226
++ + GPLS +RRE + I ++N S+ +D T GK VY
Sbjct: 218 SVTGNILVCSGPLSVYRREVVVPNIDRYINQTFLGIPVSIGDDRCLTNYATDLGKTVYQS 277
Query: 227 KAKLFTRMPLTLGELWRQRRRW 248
AK T +P + +Q+ RW
Sbjct: 278 TAKCITDVPDKMSTYLKQQNRW 299
>pir||A53100 hyaluronate synthase A (HasA) - Streptococcus sp. (group A)
>gi|473747|gb|AAA17725.1| (L21187) hyaluronate synthase
[Streptococcus pyogenes]
Length = 419
Score = 93.6 bits (229), Expect = 3e-18
Identities = 85/299 (28%), Positives = 142/299 (47%), Gaps = 35/299 (11%)
Query: 15 GYFFLRYL---LGLLKEYKTVSWKP---KVSVIIPAYNEE-ENIKKAIKAALSQDYPVEE 67
G + YL LGL Y+ KP KV+ +IP+YNE+ E++ + +K+ L+Q YP+ E
Sbjct: 37 GVILITYLVIKLGLSFLYEPFKGKPHDYKVAAVIPSYNEDAESLLETLKSVLAQTYPLSE 96
Query: 68 VIVVDDGSED-GTYEKAKEVKDERVKVIR-------IEHKGKAGAINEGLKLAKGEVIVV 119
+ +VDDGS + + +E + V + R + +KGK A + + +V +
Sbjct: 97 IYIVDDGSSNTDAIQLIEEYVNREVDICRNVIVHRSLVNKGKRHAQAWAFERSDADVFLT 156
Query: 120 TDADSFMSRDAVRRLVERFHSEDVVAVGGQI--RVIVDSFLAFIQDIEHLRIAMYRRAKE 177
D+D+++ +A+ L++ F+ E V A G + R + L + DI + RA +
Sbjct: 157 VDSDTYIYPNALEELLKSFNDETVYAATGHLNARNRQTNLLTRLTDIRYDNAFGVERAAQ 216
Query: 178 --LEDLTLAPGPLSAFRREA----LERIG-----GFVNSLVEDYATTKALKKFGKVVYSP 226
++ + GPLS +RRE LER G S+ +D T G+ VY
Sbjct: 217 SLTGNILVCSGPLSIYRREVIIPNLERYKNQTFLGLPVSIGDDRCLTNYAIDLGRTVYQS 276
Query: 227 KAKLFTRMPLTLGELWRQRRRW---FLGDLSHVDAKDIIMLILGDIIAFLDIFLPVIFI 282
A+ T +P L +Q+ RW F + S + K I+ I+A IF V+F+
Sbjct: 277 TARCDTDVPFQLKSYLKQQNRWNKSFFRE-SIISVKKILS---NPIVALWTIFEVVMFM 331
>gi|10956340 pXO1-93 [Bacillus anthracis] >gi|7474334|pir||E59102 hypothetical
protein pXO1-93 - Bacillus anthracis virulence plasmid
pXO1 >gi|4894309|gb|AAD32397.1|AAD32397 (AF065404)
pXO1-93 [Bacillus anthracis]
Length = 366
Score = 92.8 bits (227), Expect = 5e-18
Identities = 78/251 (31%), Positives = 118/251 (46%), Gaps = 39/251 (15%)
Query: 37 KVSVIIPAYNEEEN-IKKAIKAALSQDYPVEEVIVVDDGSED-GTYEKAKEVKDERVKVI 94
KV+V++P+YNE + I I + L+QDYP+ E+ VDDGS+D YE A ++++E ++
Sbjct: 2 KVAVVVPSYNESASAIVNTINSVLAQDYPIHEIFFVDDGSKDKSAYEVALKMREELLRTQ 61
Query: 95 R-------------------IEHK-----GKAGAINEGLKLAKGEVIVVTDADSFMSRDA 130
R I H+ GK A K + IV D+D + +A
Sbjct: 62 REIAATTKNICSEILGIPDLIVHRLPKNCGKRHAQLWAFKRTTADAIVTIDSDGDLFPNA 121
Query: 131 VRRLVERFHSEDVVAVGG--QIRVIVDSFLAFIQDIEHLRIAMYRRAKE--LEDLTLAPG 186
VR L++ F+ E V+A G IR D+ L + D+ + RA + ++ + G
Sbjct: 122 VRELLKPFNDEKVMATTGHVNIRNRNDNLLTKLIDMRYDNAFRVERAAQSVTGNVLVCSG 181
Query: 187 PLSAFRREA----LERIGG--FVNSLV---EDYATTKALKKFGKVVYSPKAKLFTRMPLT 237
PLS +RRE LE G F+ V +D T GK VY A+ T P T
Sbjct: 182 PLSCYRREVITENLEHYGSQMFLGEEVQFGDDRCLTNYAILKGKTVYQSTARCITDAPTT 241
Query: 238 LGELWRQRRRW 248
L + +Q+ RW
Sbjct: 242 LKQFLKQQLRW 252
>sp|Q54865|HASA_STRPY HYALURONAN SYNTHASE (HYALURONATE SYNTHASE) (HYALURONIC ACID
SYNTHASE) (HA SYNTHASE) >gi|410043|gb|AAA17981.1|
(L20853) hyaluronan synthase [Streptococcus pyogenes]
Length = 419
Score = 91.7 bits (224), Expect = 1e-17
Identities = 84/299 (28%), Positives = 141/299 (47%), Gaps = 35/299 (11%)
Query: 15 GYFFLRYL---LGLLKEYKTVSWKP---KVSVIIPAYNEE-ENIKKAIKAALSQDYPVEE 67
G + YL LGL Y+ P KV+ +IP+YNE+ E++ + +K+ L+Q YP+ E
Sbjct: 37 GVILITYLVIKLGLSFLYEPFKGNPHDYKVAAVIPSYNEDAESLLETLKSVLAQTYPLSE 96
Query: 68 VIVVDDGSED-GTYEKAKEVKDERVKVIR-------IEHKGKAGAINEGLKLAKGEVIVV 119
+ +VDDGS + + +E + V + R + +KGK A + + +V +
Sbjct: 97 IYIVDDGSSNTDAIQLIEEYVNREVDICRNVIVHRSLVNKGKRHAQAWAFERSDADVFLT 156
Query: 120 TDADSFMSRDAVRRLVERFHSEDVVAVGGQI--RVIVDSFLAFIQDIEHLRIAMYRRAKE 177
D+D+++ +A+ L++ F+ E V A G + R + L + DI + RA +
Sbjct: 157 VDSDTYIYPNALEELLKSFNDETVYAATGHLNARNRQTNLLTRLTDIRYDNAFGVERAAQ 216
Query: 178 --LEDLTLAPGPLSAFRREA----LERIG-----GFVNSLVEDYATTKALKKFGKVVYSP 226
++ + GPLS +RRE LER G S+ +D T G+ VY
Sbjct: 217 SLTGNILVCSGPLSIYRREVIIPNLERYKNQTFLGLPVSIGDDRCLTNYAIDLGRTVYQS 276
Query: 227 KAKLFTRMPLTLGELWRQRRRW---FLGDLSHVDAKDIIMLILGDIIAFLDIFLPVIFI 282
A+ T +P L +Q+ RW F + S + K I+ I+A IF V+F+
Sbjct: 277 TARCDTDVPFQLKSYLKQQNRWNKSFFRE-SIISVKKILS---NPIVALWTIFEVVMFM 331
>gb|AAA17982.1| (L20853) hyaluronan synthase [Streptococcus pyogenes]
Length = 404
Score = 91.7 bits (224), Expect = 1e-17
Identities = 84/299 (28%), Positives = 141/299 (47%), Gaps = 35/299 (11%)
Query: 15 GYFFLRYL---LGLLKEYKTVSWKP---KVSVIIPAYNEE-ENIKKAIKAALSQDYPVEE 67
G + YL LGL Y+ P KV+ +IP+YNE+ E++ + +K+ L+Q YP+ E
Sbjct: 22 GVILITYLVIKLGLSFLYEPFKGNPHDYKVAAVIPSYNEDAESLLETLKSVLAQTYPLSE 81
Query: 68 VIVVDDGSED-GTYEKAKEVKDERVKVIR-------IEHKGKAGAINEGLKLAKGEVIVV 119
+ +VDDGS + + +E + V + R + +KGK A + + +V +
Sbjct: 82 IYIVDDGSSNTDAIQLIEEYVNREVDICRNVIVHRSLVNKGKRHAQAWAFERSDADVFLT 141
Query: 120 TDADSFMSRDAVRRLVERFHSEDVVAVGGQI--RVIVDSFLAFIQDIEHLRIAMYRRAKE 177
D+D+++ +A+ L++ F+ E V A G + R + L + DI + RA +
Sbjct: 142 VDSDTYIYPNALEELLKSFNDETVYAATGHLNARNRQTNLLTRLTDIRYDNAFGVERAAQ 201
Query: 178 --LEDLTLAPGPLSAFRREA----LERIG-----GFVNSLVEDYATTKALKKFGKVVYSP 226
++ + GPLS +RRE LER G S+ +D T G+ VY
Sbjct: 202 SLTGNILVCSGPLSIYRREVIIPNLERYKNQTFLGLPVSIGDDRCLTNYAIDLGRTVYQS 261
Query: 227 KAKLFTRMPLTLGELWRQRRRW---FLGDLSHVDAKDIIMLILGDIIAFLDIFLPVIFI 282
A+ T +P L +Q+ RW F + S + K I+ I+A IF V+F+
Sbjct: 262 TARCDTDVPFQLKSYLKQQNRWNKSFFRE-SIISVKKILS---NPIVALWTIFEVVMFM 316
>pir||A48755 hyaluronan synthase (EC 2.4.1.-) - Streptococcus pyogenes
>gi|410046|gb|AAA17984.1| (L20853) hyaluronan synthase
[Streptococcus pyogenes]
Length = 395
Score = 91.7 bits (224), Expect = 1e-17
Identities = 84/299 (28%), Positives = 141/299 (47%), Gaps = 35/299 (11%)
Query: 15 GYFFLRYL---LGLLKEYKTVSWKP---KVSVIIPAYNEE-ENIKKAIKAALSQDYPVEE 67
G + YL LGL Y+ P KV+ +IP+YNE+ E++ + +K+ L+Q YP+ E
Sbjct: 13 GVILITYLVIKLGLSFLYEPFKGNPHDYKVAAVIPSYNEDAESLLETLKSVLAQTYPLSE 72
Query: 68 VIVVDDGSED-GTYEKAKEVKDERVKVIR-------IEHKGKAGAINEGLKLAKGEVIVV 119
+ +VDDGS + + +E + V + R + +KGK A + + +V +
Sbjct: 73 IYIVDDGSSNTDAIQLIEEYVNREVDICRNVIVHRSLVNKGKRHAQAWAFERSDADVFLT 132
Query: 120 TDADSFMSRDAVRRLVERFHSEDVVAVGGQI--RVIVDSFLAFIQDIEHLRIAMYRRAKE 177
D+D+++ +A+ L++ F+ E V A G + R + L + DI + RA +
Sbjct: 133 VDSDTYIYPNALEELLKSFNDETVYAATGHLNARNRQTNLLTRLTDIRYDNAFGVERAAQ 192
Query: 178 --LEDLTLAPGPLSAFRREA----LERIG-----GFVNSLVEDYATTKALKKFGKVVYSP 226
++ + GPLS +RRE LER G S+ +D T G+ VY
Sbjct: 193 SLTGNILVCSGPLSIYRREVIIPNLERYKNQTFLGLPVSIGDDRCLTNYAIDLGRTVYQS 252
Query: 227 KAKLFTRMPLTLGELWRQRRRW---FLGDLSHVDAKDIIMLILGDIIAFLDIFLPVIFI 282
A+ T +P L +Q+ RW F + S + K I+ I+A IF V+F+
Sbjct: 253 TARCDTDVPFQLKSYLKQQNRWNKSFFRE-SIISVKKILS---NPIVALWTIFEVVMFM 307
>gb|AAA17983.1| (L20853) hyaluronan synthase [Streptococcus pyogenes]
Length = 400
Score = 91.7 bits (224), Expect = 1e-17
Identities = 84/299 (28%), Positives = 141/299 (47%), Gaps = 35/299 (11%)
Query: 15 GYFFLRYL---LGLLKEYKTVSWKP---KVSVIIPAYNEE-ENIKKAIKAALSQDYPVEE 67
G + YL LGL Y+ P KV+ +IP+YNE+ E++ + +K+ L+Q YP+ E
Sbjct: 18 GVILITYLVIKLGLSFLYEPFKGNPHDYKVAAVIPSYNEDAESLLETLKSVLAQTYPLSE 77
Query: 68 VIVVDDGSED-GTYEKAKEVKDERVKVIR-------IEHKGKAGAINEGLKLAKGEVIVV 119
+ +VDDGS + + +E + V + R + +KGK A + + +V +
Sbjct: 78 IYIVDDGSSNTDAIQLIEEYVNREVDICRNVIVHRSLVNKGKRHAQAWAFERSDADVFLT 137
Query: 120 TDADSFMSRDAVRRLVERFHSEDVVAVGGQI--RVIVDSFLAFIQDIEHLRIAMYRRAKE 177
D+D+++ +A+ L++ F+ E V A G + R + L + DI + RA +
Sbjct: 138 VDSDTYIYPNALEELLKSFNDETVYAATGHLNARNRQTNLLTRLTDIRYDNAFGVERAAQ 197
Query: 178 --LEDLTLAPGPLSAFRREA----LERIG-----GFVNSLVEDYATTKALKKFGKVVYSP 226
++ + GPLS +RRE LER G S+ +D T G+ VY
Sbjct: 198 SLTGNILVCSGPLSIYRREVIIPNLERYKNQTFLGLPVSIGDDRCLTNYAIDLGRTVYQS 257
Query: 227 KAKLFTRMPLTLGELWRQRRRW---FLGDLSHVDAKDIIMLILGDIIAFLDIFLPVIFI 282
A+ T +P L +Q+ RW F + S + K I+ I+A IF V+F+
Sbjct: 258 TARCDTDVPFQLKSYLKQQNRWNKSFFRE-SIISVKKILS---NPIVALWTIFEVVMFM 312
>emb|CAC05896.1| (AL391754) putative glycosyltransferase [Streptomyces coelicolor]
Length = 487
Score = 90.5 bits (221), Expect = 3e-17
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 52/261 (19%)
Query: 35 KPKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDE-RVKV 93
+P+VS ++ NE +I+ +++ DYP +++VVDD S+DGT + + + E + +
Sbjct: 113 RPRVSFLLAVRNERAHIEACVRSMAGVDYPDVQLVVVDDASDDGTPDVLERLAAELPLTL 172
Query: 94 IRIEHK-GKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERF-HSEDVVAVGGQIR 151
IR+E GK GA+ +A G+V++ TD+D ++ DAVR V ++ AVGG R
Sbjct: 173 IRLEENLGKKGALVRACAVADGDVLLFTDSDCVVAPDAVRHCVTALVRHPELGAVGGHCR 232
Query: 152 VIVD--SFLAFIQDIEHLRIAMYRRAKELE----DLTLAPGPLSAFRREALERIGGFVNS 205
+ LA +QDI + +R +K E +T GPL+AFRREA + ++ +
Sbjct: 233 ALNTDAGLLARVQDIWY--EGQFRISKAAEAAFGSVTCVSGPLAAFRREA---VWNYLPA 287
Query: 206 LVED--------YATTKALKKF------------------------------GKVVYSPK 227
ED +AT + L + +V Y+
Sbjct: 288 WAEDRFLGAPFRFATDRQLTGYVLGQAWHGRALKDRHADSPFVRDHDYPELRWEVGYTRA 347
Query: 228 AKLFTRMPLTLGELWRQRRRW 248
A+++TR+P G RQ+ RW
Sbjct: 348 ARVWTRVPSRPGSFLRQQIRW 368
>gb|AAK43339.1| Glycosyltransferase, putative [Sulfolobus solfataricus]
Length = 349
Score = 90.5 bits (221), Expect = 3e-17
Identities = 80/288 (27%), Positives = 142/288 (48%), Gaps = 27/288 (9%)
Query: 40 VIIPAYNEEENIKKAIKAALSQDYPVE--EVIVVDDGSEDGTYEKAKEVKDERVKVIRIE 97
+I+P NEE + + + ++ +Y E+IVV+DGS D T++ KE + + +IR
Sbjct: 1 MIVPVKNEERVLPRLLDRLVNLEYDKSKYEIIVVEDGSTDRTFQICKEYEIKYNNLIRCY 60
Query: 98 H-------KGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQ- 149
GK+ A+N L+++KGE+I + D D+ D + + +F V AV G+
Sbjct: 61 SLPRANVPNGKSRALNFALRISKGEIIGIFDGDTVPRLDILEYVEPKFEDITVGAVQGKL 120
Query: 150 ----IRVIVDSFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIGGFVN- 204
+R V S LA I+++ + ++ RAK + G S R+ + +GG+
Sbjct: 121 VPINVRESVTSRLAAIEELIY-EYSIAGRAK-VGLFVPIEGTCSFIRKSIIMELGGWNEY 178
Query: 205 SLVEDY-ATTKALKKFGKVVYSPKAKLFTRMPLTLGELWRQRRRWF-------LGDLSHV 256
SL ED + K + K K+VYSP + +P++L L RQR RW+ LG L +
Sbjct: 179 SLTEDLDISLKIVNKGCKIVYSPTTISWREVPVSLRVLIRQRLRWYRGHLEVQLGKLRKI 238
Query: 257 DAK--DIIMLILGDIIAFLDIFLPVIFIKYGAFALLLLFILFEILTML 302
D + D I+++L L++ + + Y + ++ L + ++L
Sbjct: 239 DLRIIDGILIVLTPFFMVLNLVNYSLVLVYSSSLYIVAASLVSLASLL 286
>emb|CAB46918.2| (AJ242946) hyaluronan synthase [Streptococcus uberis]
Length = 417
Score = 86.6 bits (211), Expect = 4e-16
Identities = 97/372 (26%), Positives = 165/372 (44%), Gaps = 42/372 (11%)
Query: 15 GYFFLRYL---LGL---LKEYKTVSWKPKVSVIIPAYNEEE-NIKKAIKAALSQDYPVEE 67
G L YL +GL + YK + KV+ IIP+YNE+ + + +K+ Q YP+ E
Sbjct: 38 GIILLTYLSIKMGLSFFYRPYKGSVGQYKVAAIIPSYNEDGVGLLETLKSVQKQTYPIAE 97
Query: 68 VIVVDDGSEDGT-------YEKAKEVKDERVKVIRIEHKGKAGAINEGLKLAKGEVIVVT 120
+ V+DDGS D T Y K D+ + E+ GK A + + +V +
Sbjct: 98 IFVIDDGSVDKTGIKLVEDYVKLNGFGDQVIVHQMPENVGKRHAQAWAFERSDADVFLTV 157
Query: 121 DADSFMSRDAVRRLVERFHSEDVVAVGGQI--RVIVDSFLAFIQDIEHLRIAMYRRAKE- 177
D+D+++ DA+ L++ F+ +V A G + R + L + DI + RA +
Sbjct: 158 DSDTYIYPDALEELLKTFNDPEVYAATGHLNARNRQTNLLTRLTDIRYDNAFGVERAAQS 217
Query: 178 -LEDLTLAPGPLSAFRREA----LERIG-----GFVNSLVEDYATTKALKKFGKVVYSPK 227
++ + GPLS +RR LER G S+ +D T GK VY
Sbjct: 218 VTGNILVCSGPLSIYRRSVGIPNLERYTSQTFLGVPVSIGDDRCLTNYATDLGKTVYQST 277
Query: 228 AKLFTRMPLTLGELWRQRRRW---FLGDLSHVDAKDIIMLILGDIIAFLDIFLPVIFIKY 284
A+ T +P +Q+ RW F + S + K ++ + ++ + I + Y
Sbjct: 278 ARCDTDVPDKFKVFIKQQNRWNKSFFRE-SIISVKKLLATPSVAVWTITEVSM-FIMLVY 335
Query: 285 GAFALLL----LFILFEILTMLVPVIFEG--GSITEALLFPIALMFLASFYLSLHIYGYA 338
F+LL+ F L +++ LV + ++ + P A + L+ FY +H++
Sbjct: 336 SIFSLLIGEAQEFNLIKLVAFLVIIFIVALCRNVHYMVKHPFAFL-LSPFYGLIHLF--- 391
Query: 339 VTLKNKISQLFS 350
V KI LF+
Sbjct: 392 VLQPLKIYSLFT 403
>pir||E83022 probable glycosyl transferase PA5000 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9951285|gb|AAG08385.1|AE004912_11 (AE004912)
probable glycosyl transferase [Pseudomonas aeruginosa]
Length = 294
Score = 85.8 bits (209), Expect = 7e-16
Identities = 62/196 (31%), Positives = 105/196 (52%), Gaps = 7/196 (3%)
Query: 35 KPKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVI 94
+P VSVII +YN E+ I+ +I + +Q Y E++VVDDGS DG+ E + ++ + +
Sbjct: 9 QPLVSVIIASYNHEKYIEASIASVAAQTYRNVELLVVDDGSSDGSVELLRGLQAKYGFDL 68
Query: 95 RI-EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVI 153
R+ +++G + +NE + A+G +IV +D M + + V + V + I
Sbjct: 69 RVQQNQGLSRTLNEAITRARGNLIVPFGSDDIMLPQRLEKQVAHMWDKPEVGICAGNIEI 128
Query: 154 VDSFLAFIQDIEHLRIAMYRRAKELEDLTL--APGPLS---AFRREALERIGGFVNSL-V 207
+DS + E + + R + +DL L PGP++ FRREALE++GGF + +
Sbjct: 129 IDSNGRVMPGKEQRKRDLPFRRLDFDDLFLDRKPGPMAPTLMFRREALEKVGGFDPDIRL 188
Query: 208 EDYATTKALKKFGKVV 223
ED A+ K G V+
Sbjct: 189 EDVYIELAVTKAGYVI 204
>pir||A75176 dolichyl-phosphate mannose synthase related protein PAB1981 -
Pyrococcus abyssi (strain Orsay)
>gi|5457998|emb|CAB49488.1| (AJ248284)
DOLICHYL-PHOSPHATE MANNOSE SYNTHASE RELATED PROTEIN
[Pyrococcus abyssi]
Length = 211
Score = 82.3 bits (200), Expect = 8e-15
Identities = 69/193 (35%), Positives = 96/193 (48%), Gaps = 13/193 (6%)
Query: 37 KVSVIIPAYNEEENIKKAIKAALSQDYP--VEEVIVVDDGSEDGTYEKAKEVKDERVKVI 94
KVSVIIPAYNEE+ I K + + P V EVIVVDDGS+D T + AK V+VI
Sbjct: 2 KVSVIIPAYNEEKRIGKVLA-----EIPEFVNEVIVVDDGSKDNTADVAKRFG---VRVI 53
Query: 95 RI-EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVI 153
R+ E++GK A+ EG+K AKG++IV DAD + +++ D V G+ RVI
Sbjct: 54 RLPENRGKGAAMREGIKHAKGDIIVFMDADGQHDPKEIPKIIAPIIKGDADFVIGK-RVI 112
Query: 154 VDSFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIGGFVNSLVEDYATT 213
++ + + RAK + + A +RE L I VE
Sbjct: 113 KAGKRPLVRKLSNFITTTLIRAKIKQKVDDTQSGFRAIKREFLPDIES-ERYEVETEVLI 171
Query: 214 KALKKFGKVVYSP 226
K KK ++V P
Sbjct: 172 KVAKKGARIVEVP 184
>gb|AAB24745.1| NodC=polysaccharide polymerizing enzyme homolog [Rhizobium
meliloti, Peptide, 424 aa]
Length = 424
Score = 79.6 bits (193), Expect = 5e-14
Identities = 72/232 (31%), Positives = 111/232 (47%), Gaps = 19/232 (8%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVE-EVIVVDDGS---EDGTYEKAKEVKDERV 91
P V VI+P++NE I A A+++QDYP E V VVDDGS E +A +D R
Sbjct: 48 PAVDVIVPSFNEPPGILSACLASIAQDYPGELRVYVVDDGSRNREAIVRVRAFYSRDPRF 107
Query: 92 KVIRI-EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQI 150
I + E+ GK A + + G++++ D+DS ++ D V +L + +V AV GQ+
Sbjct: 108 SFILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMRDPEVGAVMGQL 167
Query: 151 RV--IVDSFLAFIQDIEHLRIAMYRRAKE--LEDLTLAPGPLSAFRREAL---------E 197
D++L + D+E+ RA + + GP + +RR AL +
Sbjct: 168 TASNSGDTWLTKLIDMEYWLACNEERAAQSRFGAVMCCCGPCAMYRRSALASLLDQYETQ 227
Query: 198 RIGGFVNSLVEDYATTKALKKFG-KVVYSPKAKLFTRMPLTLGELWRQRRRW 248
G + ED T + K G + Y P A + T +P TL RQ+ RW
Sbjct: 228 LFRGKPSDFGEDRHLTILMLKAGFRTEYVPDAIVATVVPDTLKPYLRQQLRW 279
>sp|P33697|EXOO_RHIME SUCCINOGLYCAN BIOSYNTHESIS PROTEIN EXOO >gi|538705|pir||C49348
succinoglycan biosynthesis glycosyltransferase (EC
2.4.1.-) exoO [validated] - Rhizobium meliloti
>gi|393243|gb|AAA16044.1| (L20758) exoO [Sinorhizobium
meliloti]
Length = 334
Score = 79.6 bits (193), Expect = 5e-14
Identities = 53/149 (35%), Positives = 79/149 (52%), Gaps = 8/149 (5%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIR 95
P V+ ++ AYN + I +AI++AL+Q+ EV+VVDD S D T + D RV++I
Sbjct: 10 PDVTFVVAAYNSADTIVRAIESALAQEGVTVEVVVVDDCSADATPALVAAIPDPRVRLIA 69
Query: 96 IE-HKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVIV 154
++ ++G GA N G+ A+G I V D+D + D +RR++ER A G QI V
Sbjct: 70 LDRNRGPGGARNAGIGAARGRWIAVLDSDDTVRPDRLRRMIER-----ADAAGAQI--AV 122
Query: 155 DSFLAFIQDIEHLRIAMYRRAKELEDLTL 183
D+ D LR+ L LTL
Sbjct: 123 DNLDVVSLDGRSLRMFSEAELARLPQLTL 151
>pir||S39958 exoO protein - Rhizobium meliloti (strain 2011)
>gi|397572|emb|CAA80347.1| (Z22636) ExoO [Sinorhizobium
meliloti] >gi|742329|prf||2009367D ExoO protein
[Rhizobium meliloti]
Length = 348
Score = 79.6 bits (193), Expect = 5e-14
Identities = 53/149 (35%), Positives = 79/149 (52%), Gaps = 8/149 (5%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIR 95
P V+ ++ AYN + I +AI++AL+Q+ EV+VVDD S D T + D RV++I
Sbjct: 10 PDVTFVVAAYNSADTIVRAIESALAQEGVTVEVVVVDDCSADATPALVAAIPDPRVRLIA 69
Query: 96 IE-HKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVIV 154
++ ++G GA N G+ A+G I V D+D + D +RR++ER A G QI V
Sbjct: 70 LDRNRGPGGARNAGIGAARGRWIAVLDSDDTVRPDRLRRMIER-----ADAAGAQI--AV 122
Query: 155 DSFLAFIQDIEHLRIAMYRRAKELEDLTL 183
D+ D LR+ L LTL
Sbjct: 123 DNLDVVSLDGRSLRMFSEAELARLPQLTL 151
>pir||G70463 dolichol-phosphate mannosyltransferase - Aquifex aeolicus
>gi|2984166|gb|AAC07699.1| (AE000762) dolichol-phosphate
mannosyltransferase [Aquifex aeolicus]
Length = 322
Score = 79.2 bits (192), Expect = 7e-14
Identities = 55/131 (41%), Positives = 75/131 (56%), Gaps = 13/131 (9%)
Query: 38 VSVIIPAYNEEENIK------KAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV--KDE 89
+SV+IPAYNEEENI K + +L +DY E+I VDDGS D T E KE+ KD+
Sbjct: 2 ISVVIPAYNEEENIPVLYEKLKKVLDSLGEDY---EIIFVDDGSTDRTPEILKEIANKDK 58
Query: 90 RVKVIRIEHK-GKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGG 148
+VKVIR G+ AI G + AKG+VI+ DAD + + +L+E+ E V G
Sbjct: 59 KVKVIRFRRNYGQTAAIYAGFEHAKGDVIITMDADLQNDPEDIPKLLEKM-KEGYDIVSG 117
Query: 149 QIRVIVDSFLA 159
+ D FL+
Sbjct: 118 WRKDRKDPFLS 128
>gb|AAC60770.1| (U46859) WbcG [Yersinia enterocolitica (type 0:8)]
Length = 288
Score = 78.0 bits (189), Expect = 2e-13
Identities = 41/116 (35%), Positives = 65/116 (55%)
Query: 38 VSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIRIE 97
VSV+IP YN E I+ AI + LSQ+Y EVI++DDGS D + + + D+R+K + E
Sbjct: 7 VSVVIPVYNAERFIRTAISSVLSQEYVNIEVIIIDDGSTDSCGKIIQSINDDRIKYFKKE 66
Query: 98 HKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVI 153
+ G A+N + +I DAD M +R+ ++ ++ VGG I++I
Sbjct: 67 NGGIVSALNFAIPKVHANIIARMDADDIMEPLRLRKQLDYMARYNLDVVGGNIKLI 122
>sp|Q57022|Y868_HAEIN PUTATIVE GLYCOSYL TRANSFERASE HI0868 >gi|1074166|pir||A64099
glycosyl transferase homolog HI0868 - Haemophilus
influenzae (strain Rd KW20) >gi|1573885|gb|AAC22526.1|
(U32768) conserved hypothetical protein [Haemophilus
influenzae Rd]
Length = 250
Score = 77.6 bits (188), Expect = 2e-13
Identities = 64/210 (30%), Positives = 105/210 (49%), Gaps = 22/210 (10%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV--KDERVKV 93
P +S+I+P YN E + + I + L+Q Y E+I++DDGS D + E + KD+RVK+
Sbjct: 4 PLISIIMPVYNAECYLNQGILSCLNQSYQNIELILIDDGSTDKSIEIINNIIDKDKRVKL 63
Query: 94 -IRIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRV 152
++G A A N GL+ A+G+ I D+D F++ D + + + +V G
Sbjct: 64 FFTPTNQGPAAARNIGLEKAQGDYITFLDSDDFIANDKLEKQLNFMLQNHLVMTHGN--- 120
Query: 153 IVDSFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALER----IGGFVNSLVE 208
AF D+E +I + +K+++ LTL G +ER + F N E
Sbjct: 121 -----YAFC-DLEGNQIKLVTTSKKIDYLTLLQGNQFKIMTVLVERESIKLLRFPNIKHE 174
Query: 209 DYA----TTKALKKFGKVVYSPKAKLFTRM 234
DYA K +K+ ++YS +A F R+
Sbjct: 175 DYAFFLDCLKEVKQ--SILYSHQASSFVRI 202
>pir||B83557 probable glycosyl transferase PA0705 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946588|gb|AAG04094.1|AE004506_4 (AE004506) probable
glycosyl transferase [Pseudomonas aeruginosa]
Length = 299
Score = 77.6 bits (188), Expect = 2e-13
Identities = 52/191 (27%), Positives = 94/191 (48%), Gaps = 2/191 (1%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV-KDERVKVI 94
P VSV+ P +N E+ +++A+++ QDYP EVI+VDDGS D +Y +++ K ++
Sbjct: 17 PLVSVVAPCFNAEKYLEEALRSIYEQDYPNFEVIIVDDGSTDNSYAMLEQLQKVHGFQLY 76
Query: 95 RIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVIV 154
R +++G + A+N GL+ A+G+ + D D M ++ V G + + +
Sbjct: 77 RQQNQGVSAALNFGLRHARGDYVATPDLDDIMLPHSLSVRAAYLDQHPEVGCVGALVIYI 136
Query: 155 DSFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIGGFVNSL-VEDYATT 213
DS + RI L + + P+S +R EAL G + + V+D+ T
Sbjct: 137 DSEGQETKRQNGNRIRQLDFDYLLGNAYVCGAPVSLYRMEALRAAGFYDPEIKVQDFQMT 196
Query: 214 KALKKFGKVVY 224
+ G ++
Sbjct: 197 LRIASQGYQIH 207
>gb|AAC44786.1| (U70729) MigA [Pseudomonas aeruginosa]
Length = 299
Score = 77.3 bits (187), Expect = 3e-13
Identities = 52/187 (27%), Positives = 92/187 (48%), Gaps = 2/187 (1%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV-KDERVKVI 94
P VSV+ P +N E+ +++A+++ QDYP EVI+VDDGS D +Y +++ K ++
Sbjct: 17 PLVSVVAPCFNAEKYLEEALRSIYEQDYPNFEVIIVDDGSTDNSYAMLEQLQKVHGFQLY 76
Query: 95 RIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVIV 154
R +++G + A+N GL+ A+G+ + D D M ++ V G + + +
Sbjct: 77 RQQNQGVSAALNFGLRHARGDYVATPDLDDIMLPHSLSVRAAYLDQHPEVGCVGALVIYI 136
Query: 155 DSFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIGGFVNSL-VEDYATT 213
DS + RI L + + P+S +R EAL G + + V+D+ T
Sbjct: 137 DSEGQETKRQNGNRIRQLDFDYLLGNAYVCGAPVSLYRMEALRAAGFYDPEIKVQDFQMT 196
Query: 214 KALKKFG 220
+ G
Sbjct: 197 LRIASQG 203
>pir||D71038 hypothetical protein PH1596 - Pyrococcus horikoshii
>gi|3258025|dbj|BAA30708.1| (AP000006) 215aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 215
Score = 77.3 bits (187), Expect = 3e-13
Identities = 48/101 (47%), Positives = 65/101 (63%), Gaps = 7/101 (6%)
Query: 37 KVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIRI 96
K+SVIIPAYNEE I +K D+ V+EVIVVDDGS DGT + A E+ VIR+
Sbjct: 6 KISVIIPAYNEERRIGNVLKGI--PDF-VDEVIVVDDGSSDGTSKVAMELG---ATVIRL 59
Query: 97 -EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVE 136
++ GK A+ EGLK++ G++IV DAD + + RLV+
Sbjct: 60 NKNSGKGAAMREGLKISTGDIIVFMDADGQHNPKEIYRLVK 100
>gb|AAF18946.1|AF155804_7 (AF155804) Cps1K [Streptococcus suis]
Length = 279
Score = 77.3 bits (187), Expect = 3e-13
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 37 KVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYE--KAKEVKDERVKVI 94
K+S+I+P YN E+ + K I + ++Q Y E+++V+DGS D + E A KD R++
Sbjct: 6 KISIIVPIYNVEKYLSKCIDSIVNQTYKHIEILLVNDGSTDNSEEICLAYAKKDSRIRYF 65
Query: 95 RIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSED-VVAVGGQIRV 152
+ E+ G + A N G+ AKG+ + D+D F+ + ++RL E E+ +VAV G RV
Sbjct: 66 KKENGGLSDARNYGISRAKGDYLAFIDSDDFIHSEFIQRLHEAIERENALVAVAGYDRV 124
>sp|P22639|YHET_ANASP HYPOTHETICAL PROTEIN IN HETA 3'REGION >gi|97693|pir||B35391
hypothetical protein (hetA 3' region) - Anabaena sp.
(fragment) >gi|2625136|gb|AAC32401.1| (AF031959) unknown
[Anabaena PCC7120]
Length = 177
Score = 76.9 bits (186), Expect = 3e-13
Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 37 KVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDE---RVKV 93
K+SVII YN + +AI + L+Q + E+++VDDGS D + + +++++ ++K
Sbjct: 48 KISVIISNYNYARYLSRAINSVLAQTHSDIEIVIVDDGSTDNSRDVITQLQEQAPDKIKP 107
Query: 94 IRIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVI 153
I ++G+ GA N G A GEV+ DAD ++R+VE F + DVV V + +I
Sbjct: 108 IFQANQGQGGAFNAGFAAATGEVVAFLDADDVWKPHKLQRIVEVFQTSDVVGVMHHLDII 167
>gb|AAK42537.1| Glucosaminyltransferase, intercellular adhesion protein A homolog,
putative (icaA) [Sulfolobus solfataricus]
Length = 426
Score = 76.5 bits (185), Expect = 4e-13
Identities = 80/304 (26%), Positives = 145/304 (47%), Gaps = 29/304 (9%)
Query: 37 KVSVIIPAYNEEEN-IKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKE----VKDERV 91
++ +I+ +E+E IK+ I DY +VI+V D +E+ T++K E + D V
Sbjct: 49 RIDIIVAIKDEDEKTIKELINNLSGLDYRFYKVIIVSDDTEE-TFKKIIESLDKLPDNFV 107
Query: 92 KVIRIEHKG-KAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQI 150
+ R E+KG KAGA+N ++ E++V DA++ + +D +R++ + + D VA ++
Sbjct: 108 IIRRPENKGRKAGALNFATNISDAEMLVYLDAEARVEKDFLRKISQLDY--DAVAFRLKV 165
Query: 151 RVI---VDSFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIGGF-VNSL 206
R + V ++ E + A+++ +L + A G +R+ L +IGG+ NS+
Sbjct: 166 RDVNTQVQKIYSYTN--EFVMNALFKARDKLGLIIFANGSAFGIKRDILRKIGGWKENSV 223
Query: 207 VED--YATTKALKKFGKVVYSPKAKLFTRMPLTLGELWRQRRRWFLGD---------LSH 255
ED AL KV Y ++T P T +L+ Q +RW G L
Sbjct: 224 AEDLELGIRLALSNI-KVKYVDDITVYTLAPYTHTDLYNQIKRWAYGSGELISYSMRLFK 282
Query: 256 VDAKDIIMLILGDIIAFLDIFLPVIFIKYGAFALLLLFILFEILTMLVPVIFEGGSITEA 315
+ + I I ++L ++F+ + +L F + T L+P++ G I A
Sbjct: 283 LGIRGIEGFIYSQQWGIYPLYL-LLFLIIISIQFILNINYFYVFTSLIPILVSNG-IYIA 340
Query: 316 LLFP 319
L+ P
Sbjct: 341 LIKP 344
>pir||ZZZRC4 nodulation protein nodC - Rhizobium meliloti (strain 41)
>gi|46291|emb|CAA25810.1| (X01649) pot. open reading
frame (pot. nodC' gene) (aa 1-426) [Sinorhizobium
meliloti]
Length = 426
Score = 76.1 bits (184), Expect = 6e-13
Identities = 71/233 (30%), Positives = 112/233 (47%), Gaps = 20/233 (8%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALS-QDYPVE-EVIVVDDGSEDG---TYEKAKEVKDER 90
P V VI+P++NE+ I A A+++ QDYP E V VVDDGS + +A +D R
Sbjct: 49 PAVDVIVPSFNEDPGILSACLASIADQDYPGELRVYVVDDGSRNREAIVRVRAFYSRDPR 108
Query: 91 VKVIRI-EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQ 149
I + E+ GK A + + G++++ D+DS ++ D V +L + +V AV GQ
Sbjct: 109 FSFILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMRDPEVGAVVGQ 168
Query: 150 IRV--IVDSFLAFIQDIEHLRIAMYRRAKE--LEDLTLAPGPLSAFRREAL--------- 196
+ D++L + D+E+ RA + + GP + +RR AL
Sbjct: 169 LTASNSGDTWLTKLIDMEYWLACNEERAAQSRFGAVMCCCGPCAMYRRSALASLLDQYET 228
Query: 197 ERIGGFVNSLVEDYATTKALKKFG-KVVYSPKAKLFTRMPLTLGELWRQRRRW 248
+ G + ED T + K G + Y P A + T +P TL RQ+ RW
Sbjct: 229 QLFRGKPSDFGEDRHLTILMLKAGFRTEYVPDAIVATVVPDTLKPYLRQQLRW 281
>emb|CAA25811.1| (X01649) open reading frame (pot. nodC gene) (aa 1-402)
[Sinorhizobium meliloti]
Length = 402
Score = 76.1 bits (184), Expect = 6e-13
Identities = 71/233 (30%), Positives = 112/233 (47%), Gaps = 20/233 (8%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALS-QDYPVE-EVIVVDDGSEDG---TYEKAKEVKDER 90
P V VI+P++NE+ I A A+++ QDYP E V VVDDGS + +A +D R
Sbjct: 25 PAVDVIVPSFNEDPGILSACLASIADQDYPGELRVYVVDDGSRNREAIVRVRAFYSRDPR 84
Query: 91 VKVIRI-EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQ 149
I + E+ GK A + + G++++ D+DS ++ D V +L + +V AV GQ
Sbjct: 85 FSFILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMRDPEVGAVVGQ 144
Query: 150 IRV--IVDSFLAFIQDIEHLRIAMYRRAKE--LEDLTLAPGPLSAFRREAL--------- 196
+ D++L + D+E+ RA + + GP + +RR AL
Sbjct: 145 LTASNSGDTWLTKLIDMEYWLACNEERAAQSRFGAVMCCCGPCAMYRRSALASLLDQYET 204
Query: 197 ERIGGFVNSLVEDYATTKALKKFG-KVVYSPKAKLFTRMPLTLGELWRQRRRW 248
+ G + ED T + K G + Y P A + T +P TL RQ+ RW
Sbjct: 205 QLFRGKPSDFGEDRHLTILMLKAGFRTEYVPDAIVATVVPDTLKPYLRQQLRW 257
>sp|P04341|NODC_RHIME N-ACETYLGLUCOSAMINYLTRANSFERASE (NODULATION PROTEIN C)
>gi|152344|gb|AAA98362.1| (M11268) nodulation protein
[Sym plasmid]
Length = 426
Score = 76.1 bits (184), Expect = 6e-13
Identities = 71/233 (30%), Positives = 112/233 (47%), Gaps = 20/233 (8%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALS-QDYPVE-EVIVVDDGSEDG---TYEKAKEVKDER 90
P V VI+P++NE+ I A A+++ QDYP E V VVDDGS + +A +D R
Sbjct: 49 PAVDVIVPSFNEDPGILSACLASIADQDYPGELRVYVVDDGSRNREAIVRVRAFYSRDPR 108
Query: 91 VKVIRI-EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQ 149
I + E+ GK A + + G++++ D+DS ++ D V +L + +V AV GQ
Sbjct: 109 FSFILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMRDPEVGAVMGQ 168
Query: 150 IRV--IVDSFLAFIQDIEHLRIAMYRRAKE--LEDLTLAPGPLSAFRREAL--------- 196
+ D++L + D+E+ RA + + GP + +RR AL
Sbjct: 169 LTASNSGDTWLTKLIDMEYWLACNEERAAQSRFGAVMCCCGPCAMYRRSALASLLDQYET 228
Query: 197 ERIGGFVNSLVEDYATTKALKKFG-KVVYSPKAKLFTRMPLTLGELWRQRRRW 248
+ G + ED T + K G + Y P A + T +P TL RQ+ RW
Sbjct: 229 QLFRGKPSDFGEDRHLTILMLKAGFRTEYVPDAIVATVVPDTLKPYLRQQLRW 281
>gb|AAB95329.1| (AF038577) NodC [Sinorhizobium meliloti]
Length = 402
Score = 76.1 bits (184), Expect = 6e-13
Identities = 71/233 (30%), Positives = 112/233 (47%), Gaps = 20/233 (8%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALS-QDYPVE-EVIVVDDGSEDG---TYEKAKEVKDER 90
P V VI+P++NE+ I A A+++ QDYP E V VVDDGS + +A +D R
Sbjct: 25 PAVDVIVPSFNEDPGILSACLASIADQDYPGELRVYVVDDGSRNREAIVRVRAFYSRDPR 84
Query: 91 VKVIRI-EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQ 149
I + E+ GK A + + G++++ D+DS ++ D V +L + +V AV GQ
Sbjct: 85 FSFILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMRDPEVGAVMGQ 144
Query: 150 IRV--IVDSFLAFIQDIEHLRIAMYRRAKE--LEDLTLAPGPLSAFRREAL--------- 196
+ D++L + D+E+ RA + + GP + +RR AL
Sbjct: 145 LTASNSGDTWLTKLIDMEYWLACNEERAAQSRFGAVMCCCGPCAMYRRSALASLLDQYET 204
Query: 197 ERIGGFVNSLVEDYATTKALKKFG-KVVYSPKAKLFTRMPLTLGELWRQRRRW 248
+ G + ED T + K G + Y P A + T +P TL RQ+ RW
Sbjct: 205 QLFRGKPSDFGEDRHLTILMLKAGFRTEYVPDAIVATVVPDTLKPYLRQQLRW 257
>gb|AAD24457.1|AF118389_14 (AF118389) Cps2K [Streptococcus suis]
Length = 276
Score = 76.1 bits (184), Expect = 6e-13
Identities = 42/118 (35%), Positives = 70/118 (58%), Gaps = 3/118 (2%)
Query: 38 VSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYE--KAKEVKDERVKVIR 95
+S+I+P YN E+ + K I + ++Q Y E+++V+DGS D + E A KD R++ +
Sbjct: 4 ISIIVPIYNVEQYLSKCINSIVNQTYKHIEILLVNDGSTDNSEEICLAYAKKDSRIRYFK 63
Query: 96 IEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSED-VVAVGGQIRV 152
E+ G + A N G+ AKG+ + D+D F+ + ++RL E E+ +VAV G RV
Sbjct: 64 KENGGLSDARNYGISRAKGDYLAFIDSDDFIHSEFIQRLHEAIERENALVAVAGYDRV 121
>emb|CAA69119.1| (Y07786) sugar transferase [Vibrio cholerae]
Length = 337
Score = 75.7 bits (183), Expect = 8e-13
Identities = 42/115 (36%), Positives = 66/115 (56%), Gaps = 2/115 (1%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYE--KAKEVKDERVKV 93
PK+SV++ YN E+ + +AI + L Q + E I+++DGS D T E K+ KD+R+ +
Sbjct: 4 PKISVVMSVYNGEKYLGEAIDSILKQTFSDFEFIIINDGSTDKTLEIIKSYMKKDDRIVL 63
Query: 94 IRIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGG 148
+ E+KG ++NEGL LAKG+ I DAD + + +E S + V G
Sbjct: 64 VSRENKGLIVSLNEGLDLAKGQYIARMDADDISIKSRFEKQIEFLDSNPDIGVCG 118
>dbj|BAA33603.1| (AB012956) probable glycosyl transferase [Vibrio cholerae]
Length = 337
Score = 75.7 bits (183), Expect = 8e-13
Identities = 42/115 (36%), Positives = 66/115 (56%), Gaps = 2/115 (1%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYE--KAKEVKDERVKV 93
PK+SV++ YN E+ + +AI + L Q + E I+++DGS D T E K+ KD+R+ +
Sbjct: 4 PKISVVMSVYNGEKYLGEAIDSILKQTFSDFEFIIINDGSTDKTLEIIKSYMKKDDRIVL 63
Query: 94 IRIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGG 148
+ E+KG ++NEGL LAKG+ I DAD + + +E S + V G
Sbjct: 64 VSRENKGLIVSLNEGLDLAKGQYIARMDADDISIKSRFEKQIEFLDSNPDIGVCG 118
>gb|AAD50485.1|AF172324_3 (AF172324) WbnA [Escherichia coli]
Length = 306
Score = 75.7 bits (183), Expect = 8e-13
Identities = 59/194 (30%), Positives = 90/194 (45%), Gaps = 14/194 (7%)
Query: 38 VSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIRIE 97
VSV+IP YN + IK+ I + L Q E+IV+DDGS D T E+ DER+K
Sbjct: 8 VSVVIPVYNCGKTIKETINSILIQTGISFEIIVIDDGSNDETARIVNEICDERIKYFYQN 67
Query: 98 HKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFH----SEDVVAVGGQIRVI 153
+ G + A+N G+K A + I D D RL +F+ + DV V + I
Sbjct: 68 NSGISVALNNGIKRAAAKYIARIDGDDIA---LPTRLETQFYMLESNPDVAMVASAVEFI 124
Query: 154 VDSFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIGGFVNSLV----ED 209
D + + + + Y L + P FR++ + +GG+ NSL+ ED
Sbjct: 125 SDDGIVIGRSFPY--TSKYFIRDVLSHHNIYAHPSVMFRKKTILSVGGY-NSLLSGYCED 181
Query: 210 YATTKALKKFGKVV 223
Y + K GK++
Sbjct: 182 YYLWMQIIKLGKII 195
>pir||G75099 sugar transferase related protein PAB0796 - Pyrococcus abyssi
(strain Orsay) >gi|5458612|emb|CAB50100.1| (AJ248286)
SUGAR TRANSFERASE RELATED PROTEIN [Pyrococcus abyssi]
Length = 331
Score = 75.3 bits (182), Expect = 1e-12
Identities = 85/330 (25%), Positives = 158/330 (47%), Gaps = 31/330 (9%)
Query: 37 KVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV------KDER 90
++S+I NEE +I+ +++ L Q P +E I+VD GS D T E +E K+
Sbjct: 2 RISLITTVKNEENSIRAFLESILQQSRPPDEFIIVDGGSTDKTVEILQEYTPLFKRKNII 61
Query: 91 VKVIRIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSR---DAVRRLVERFHSEDVVAVG 147
K+I + A N + + G++I TDA +S+ + + R E+ S D+V+ G
Sbjct: 62 YKIIVKKGANIAKGRNIAISNSSGDIIACTDAGCVLSKAWLEEIARSFEQDPSVDIVS-G 120
Query: 148 GQIRVIVDSFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIGGFVNSL- 206
+ F + +I + ++ ++ L AF+++ +++GG+ L
Sbjct: 121 WYEPLATSKFEEIVAEITYPKL---KKVLRNPSKFLPSSRSIAFKKKCWKKVGGYPEWLY 177
Query: 207 -VEDYATTKALKKFG-KVVYSPKAKLFTRMPLTLGELWRQRRRWFLGD-LSHVDAKDIIM 263
ED LK+ G K V++P A ++ ++ L +L+RQ + GD +++ +
Sbjct: 178 TAEDTLYDILLKRAGCKFVFNPNAVVYWKVRENLRKLFRQYYNYAKGDGEANLFFWRYFL 237
Query: 264 LILGDIIAFLDIFLPVIFIKYGAFALLLLFILFEILTMLV-----PVIFEGGSITEALL- 317
+ IIA I + +I+ + + LLL I++ LT L+ VI+ GGS+ + L+
Sbjct: 238 VCYFPIIA---ILISLIYWRTNNVSPLLLGIIY--LTGLISYLFGEVIYRGGSVRKILVN 292
Query: 318 FPIALMFLASFYLSLHI---YGYAVTLKNK 344
P+AL+ + ++ I YG+ K K
Sbjct: 293 LPLALIIEITILVARTIGYTYGFLKRFKYK 322
>pir||G71148 probable glycosyl transferase - Pyrococcus horikoshii
>gi|3256793|dbj|BAA29476.1| (AP000002) 294aa long
hypothetical glycosyl transferase [Pyrococcus
horikoshii]
Length = 294
Score = 74.9 bits (181), Expect = 1e-12
Identities = 39/104 (37%), Positives = 59/104 (56%)
Query: 35 KPKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVI 94
KP++SVIIP YN EE +++AI++ L Q + E++V+D + T E + D R++ I
Sbjct: 2 KPRISVIIPTYNREELLRRAIESVLDQTFDDFEILVIDGAKSESTRELVRSFGDGRIRYI 61
Query: 95 RIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERF 138
+ KG A A N G+ A+GE I D D RD + +E F
Sbjct: 62 PQKGKGIANARNLGVSKARGEFIAFLDDDDRWRRDKLELQLELF 105
>gb|AAG19465.1| (AE005039) rhamnosyl transferase; RfbQ [Halobacterium sp. NRC-1]
Length = 299
Score = 74.5 bits (180), Expect = 2e-12
Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQ-DYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVI 94
P VSV++P YN+ E +K + A + Q D P EV VVD+ S D T + + + ++
Sbjct: 5 PFVSVVVPVYNDPEGVKDTLHALVDQRDAPAFEVRVVDNDSTDETMQVIEAFAADHPEIY 64
Query: 95 ---RIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIR 151
E + A N G++ A G+VIV DAD + R +R + F DV VG ++
Sbjct: 65 CHTETEIQSSYAARNTGIEHAGGDVIVFLDADVVVERTCLRDISRTFEGSDVDYVGCNVQ 124
Query: 152 VI----VDSFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIGGFVNSLV 207
+ D+F L + Y R K AP A RRE +E +G F + LV
Sbjct: 125 MYNPGETDTFWTKYDLAMGLPVEHYLRRKR-----FAPTCALAVRREVIEAVGTFDDELV 179
>pir||A69728 biosynthesis of teichuronic acid tuaG - Bacillus subtilis
>gi|2454562|gb|AAB94868.1| (AF015609) unknown [Bacillus
subtilis] >gi|2636081|emb|CAB15572.1| (Z99122) alternate
gene name: yvhG [Bacillus subtilis]
Length = 252
Score = 73.7 bits (178), Expect = 3e-12
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 33 SWKPKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVK--DER 90
+WKP VSVI P+YN + I+ + + L Q +P E+I+VDD S DGT + ++ + DER
Sbjct: 3 NWKPLVSVITPSYNARDYIEDTVHSVLDQSHPHWEMIIVDDCSTDGTRDILQQYEKIDER 62
Query: 91 VKVIRI-EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVE 136
+ V+ + E+ G A A N+ L+ A+G + D+D +D + + +E
Sbjct: 63 IHVVYLEENSGAAVARNKALERAQGRYVAFLDSDDKWKKDKLEKQLE 109
>emb|CAA04445.1| (AJ000993) hypothetical protein [Lactococcus lactis]
Length = 548
Score = 73.7 bits (178), Expect = 3e-12
Identities = 71/236 (30%), Positives = 104/236 (43%), Gaps = 24/236 (10%)
Query: 36 PKVSVIIPAYNEEENI-KKAIKAALSQDYP---VEEVIVVDDGSEDGTYEKAKEVKDERV 91
P V + I YNE +I K+ I A+ YP E+ V+DDG + E A K+ V
Sbjct: 64 PTVDIFIATYNESSSILKRTIIASKKVRYPDLRKVEIYVLDDGDRE---EIALIAKELNV 120
Query: 92 KVIRIEHK--GKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGG- 148
K IR ++ KAG +N LK KG+++V DAD D + + V F + +
Sbjct: 121 KYIRRDNNENAKAGNLNNALKETKGDLVVTLDADMVPRVDFLEKTVGYFEDSKMGFIQAP 180
Query: 149 ---------QIRVIVDSFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERI 199
Q + L QD RI K++ + + G + FRR ALE I
Sbjct: 181 QTFFNNDPYQFNFFSEKNLNNDQDFFMRRI---ENQKDIYNSVMYIGSNAVFRRAALESI 237
Query: 200 GGFVNSLV-EDYATTKALKKFG-KVVYSPKAKLFTRMPLTLGELWRQRRRWFLGDL 253
GGF ++ ED AT ++ G K + K P +L +QR RW G++
Sbjct: 238 GGFSTGVITEDLATGMFIQAKGWKTRFVNKNLASGLAPENFSDLIKQRDRWSRGNI 293
>pir||G75191 dolichol-phosphate mannosyltransferase PAB2307 - Pyrococcus abyssi
(strain Orsay) >gi|5457491|emb|CAB48982.1| (AJ248283)
DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE [Pyrococcus
abyssi]
Length = 362
Score = 73.7 bits (178), Expect = 3e-12
Identities = 49/119 (41%), Positives = 68/119 (56%), Gaps = 9/119 (7%)
Query: 37 KVSVIIPAYNEEENIKKAI----KAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDER-V 91
KVSVI+P YNE EN+++ KA DY E+IVVDD S D T++KA+E+ V
Sbjct: 13 KVSVIVPTYNERENLEELFSRIDKALKDYDY---EIIVVDDDSPDETWKKAQELSSVYPV 69
Query: 92 KVIR-IEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQ 149
KVIR I KG + A+ G K A G+V VV DAD + + L++R +A+ +
Sbjct: 70 KVIRRINEKGLSSAVIRGFKEASGDVFVVMDADLQHPPEVIPELLKRIKEGADLAIASR 128
>pir||T44647 glycosyl transferase cpsJ [imported] - Streptococcus agalactiae
>gi|5823216|gb|AAD53070.1|AF163833_10 (AF163833) CpsI
[Streptococcus agalactiae]
Length = 322
Score = 73.0 bits (176), Expect = 5e-12
Identities = 38/110 (34%), Positives = 66/110 (59%), Gaps = 2/110 (1%)
Query: 35 KPKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV--KDERVK 92
K KV+VIIP YN E +K+ +++ L Q +P+ EVI++DDGS D + E + +D R+
Sbjct: 2 KEKVTVIIPIYNSEAYLKECVQSVLQQTHPLIEVILIDDGSTDNSGEICDNLSQEDNRIL 61
Query: 93 VIRIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSED 142
V ++ G + A N GL + GE I D+D F++ + + +++ +E+
Sbjct: 62 VFHKKNGGVSSARNLGLDKSTGEFITFVDSDDFVAPNMIEIMLKNLITEN 111
>pir||S75693 hypothetical protein sll1377 - Synechocystis sp. (strain PCC 6803)
>gi|1653339|dbj|BAA18254.1| (D90912) hypothetical
protein [Synechocystis sp.]
Length = 479
Score = 71.8 bits (173), Expect = 1e-11
Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 22/233 (9%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVE--EVIVVDDGSEDGTYEKAKEVKDE--RV 91
P+V +++ A NEE I K ++ S DYP + EV +VDD S D T +++ + ++
Sbjct: 108 PQVCLMVAAKNEEAVIGKIVQQLCSLDYPGDRHEVWIVDDNSTDRTPAILDQLRQQYPQL 167
Query: 92 KVIRI---EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGG 148
KV+R GK+GA+NE L +G+++ V DAD+ + +D +RR+V F S A+
Sbjct: 168 KVVRRGAGASGGKSGALNEVLAQTQGDIVGVFDADANVPKDLLRRVVPYFASPTFGAL-- 225
Query: 149 QIR-VIVDSFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSA----FRREALERIGGF- 202
Q+R I + + F + +A+ ++ +T G L R+AL+ +GG+
Sbjct: 226 QVRKAIANEAVNFWTRGQGAEMALDAYFQQQRIVTGGIGELRGNGQFVARQALDAVGGWN 285
Query: 203 VNSLVEDYATTKALK----KFGKVVYSPKAKLFTRMPLTLGELWRQRRRWFLG 251
++ +D T L K G +V P + T LW QR RW G
Sbjct: 286 EQTITDDLDLTIRLHLHQWKVGILVNPPVEE---EGVTTAIALWHQRNRWAEG 335
>pir||B75096 glycosyl transferase PAB0772 - Pyrococcus abyssi (strain Orsay)
>gi|5458583|emb|CAB50071.1| (AJ248286) glycosyl
transferase [Pyrococcus abyssi]
Length = 298
Score = 71.8 bits (173), Expect = 1e-11
Identities = 56/176 (31%), Positives = 83/176 (46%), Gaps = 16/176 (9%)
Query: 35 KPKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVI 94
+P VSVIIP YN +++AI + L+Q + E+IVVDD S D T E + ++D R++ I
Sbjct: 3 RPIVSVIIPTYNRANLLRRAIASVLNQKFKDFELIVVDDASTDNTPEVVESIEDGRIRYI 62
Query: 95 RI-EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVI 153
R+ ++ G A N G+K AKG I + D D + V +F + +G + V+
Sbjct: 63 RLKKNSGGPIARNIGIKKAKGRFIALLDDDDEWLPHRLEVQVRKFEN-----LGKEFGVV 117
Query: 154 VDSFLAFIQDIEHLRIAMYRRAKELEDL-------TLAPGPLSAFRREALERIGGF 202
F QD RI R K D+ P RRE ++ G F
Sbjct: 118 YGGFYYVSQD---GRILGKRLPKHRGDIYSHLLKENFIGSPTLLIRRECFKKAGLF 170
>gb|AAF18945.1|AF155804_6 (AF155804) Cps1J [Streptococcus suis]
Length = 323
Score = 71.8 bits (173), Expect = 1e-11
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 37 KVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV--KDERVKVI 94
K+SVI+P YN ++ + I++ ++Q+Y E++++DDGS D + + KE KD+RVK+
Sbjct: 3 KISVIVPVYNVDKYLSSCIESIINQNYKNIEILLIDDGSVDDSAKICKEYAEKDKRVKIF 62
Query: 95 RIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRL 134
H G + A N G+K + E I+ D+D + V +L
Sbjct: 63 FTNHSGVSNARNHGIKRSTAEYIMFVDSDDVVDSRLVEKL 102
>pir||G83517 probable glycosyl transferase PA1014 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946925|gb|AAG04403.1|AE004534_1 (AE004534) probable
glycosyl transferase [Pseudomonas aeruginosa]
Length = 330
Score = 71.4 bits (172), Expect = 1e-11
Identities = 39/123 (31%), Positives = 68/123 (54%), Gaps = 1/123 (0%)
Query: 35 KPKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDER-VKV 93
+P VSV+ +N + + +AI + +Q YP E+IVVDDGS D TYE+ +++ ++
Sbjct: 33 RPLVSVVCACFNISKYLDEAIASIYAQGYPNLELIVVDDGSTDDTYERLAMLRERHGFQL 92
Query: 94 IRIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVI 153
R ++G + A+N GL+ A+GE ++ D D + A+ V+ + V G +
Sbjct: 93 YRQANRGVSDALNHGLRHARGEFVMTPDLDDILLPGALDTRVDYLLAHPEVGCVGGFNIC 152
Query: 154 VDS 156
+DS
Sbjct: 153 IDS 155
>pir||T50039 beta-1,4-galactosyltransferase cps14J [validated] - Streptococcus
pneumoniae >gi|2198543|emb|CAA59782.1| (X85787)
ss-1,4-galactosyltransferase [Streptococcus pneumoniae]
Length = 318
Score = 71.0 bits (171), Expect = 2e-11
Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Query: 38 VSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV--KDERVKVIR 95
VS+++P YN E+ +KK+I++ L+Q Y EV++VDDGS D + E D R++V
Sbjct: 5 VSIVVPVYNVEKYLKKSIESILNQTYDNLEVLLVDDGSTDSSGEICDSFIKVDSRIRVFH 64
Query: 96 IEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHS 140
E+ G + A N G++ KG+ + D D ++S+D V +L +HS
Sbjct: 65 KENGGLSDARNFGIEHMKGQYVSFIDGDDYISKDYVWKL---YHS 106
>gb|AAC38751.1| (AF030373) galactosyl transferase [Streptococcus pneumoniae]
>gi|3818489|gb|AAC69531.1| (AF057294) Cps23fH
[Streptococcus pneumoniae]
Length = 323
Score = 70.6 bits (170), Expect = 3e-11
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 38 VSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV--KDERVKVIR 95
VS+I+P YN E+ IK +++ Q Y EVI+V+DGS D + E +++ D R +
Sbjct: 5 VSIILPVYNVEQYIKNCLESIQQQTYSNLEVIIVNDGSTDKSVEYCEQICKIDSRFSITH 64
Query: 96 IEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLV 135
E+ G + A N G+ +KG+ ++ D+D F+S+D V LV
Sbjct: 65 KENGGLSDARNVGIDKSKGDYLIFVDSDDFVSQDMVSYLV 104
>gb|AAD47916.1|AF127522_3 (AF127522) putative beta-glycosyltransferase [Rhizobium etli]
Length = 276
Score = 70.6 bits (170), Expect = 3e-11
Identities = 49/167 (29%), Positives = 82/167 (48%), Gaps = 3/167 (1%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIR 95
PK+S+I +N E I I++ +Q+YP E IVVD S+D T ++ E D +++
Sbjct: 4 PKISIITVVFNSEATIVDTIESVRAQNYPNMEYIVVDGLSKDRTLDRIHEHGDVITRLVS 63
Query: 96 IEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVIVD 155
+ G A+N+G++LA GEVI + D F + ++ E F + A G + +
Sbjct: 64 EKDFGIYDAMNKGIRLATGEVIGFINGDDFYMPGVLAKVAEAFLDPALDACYGDLCYVRQ 123
Query: 156 SFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIGGF 202
+ ++ + + H R + + E+ P P RRE ER G F
Sbjct: 124 NDISTV--VRHWRSSPFVPG-AFEEGWCPPHPTFFVRREVYERYGLF 167
>pir||F81289 probable sugar transferase Cj1438c [imported] - Campylobacter
jejuni (strain NCTC 11168) >gi|6968867|emb|CAB73862.1|
(AL139078) putative sugar transferase [Campylobacter
jejuni]
Length = 776
Score = 70.6 bits (170), Expect = 3e-11
Identities = 39/120 (32%), Positives = 65/120 (53%), Gaps = 2/120 (1%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAK--EVKDERVKV 93
PKVS+++P+ N I++ I + L+Q E++ +D S DGT E K E KD+R++V
Sbjct: 7 PKVSIVVPSLNSISYIRECIDSILNQTLKDIEILCIDANSTDGTLEVLKNYEKKDKRLRV 66
Query: 94 IRIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVI 153
I + K +N G+K AKGE + + ++D ++ + RL E D V G ++
Sbjct: 67 IISDKKSYGYQMNLGIKEAKGEYLGIVESDDYIKTNMYERLYEIAKKNDCEVVKGDFYIL 126
>pir||H81970 lacto-N-neotetraose biosynthesis glycosyl transferase NMA0524
[imported] - Neisseria meningitidis (group A strain
Z2491) >gi|7379267|emb|CAB83816.1| (AL162753)
lacto-N-neotetraose biosynthesis glycosyl tranferase
[Neisseria meningitidis Z2491]
Length = 346
Score = 70.6 bits (170), Expect = 3e-11
Identities = 61/219 (27%), Positives = 109/219 (48%), Gaps = 21/219 (9%)
Query: 35 KPKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV--KDERVK 92
+P VSV+I AYN E+ +++ ++Q + E+++VDDGS DGT AK+ +D R+K
Sbjct: 2 QPLVSVLICAYNVEKYFAQSLATVVNQTWRNLEILIVDDGSTDGTLAIAKDFQKRDSRIK 61
Query: 93 VI-RIEHKGKAGAINEGL-KLAK---GEVIVVTDADSFMSRDAVRRLV-ERFHSEDVVAV 146
++ + ++ G ++N GL +LAK GE I TDAD + D + ++V E ++A+
Sbjct: 62 ILAQAQNSGLIPSLNIGLDELAKSGMGEYIARTDADDIAAPDWIEKIVGEMEKDRSIIAM 121
Query: 147 GGQIRVIVDSFLAFIQDIEHLRIAMYR---RAKELEDLTLAPGPL----SAFRREALERI 199
G + V+ + H +++ R +++ D P+ RR ++
Sbjct: 122 GAWLEVLSEEKDGNRLARHHRHGKIWKKPTRHEDIADFFPFGNPIHNNTMIMRRSVID-- 179
Query: 200 GGF----VNSLVEDYATTKALKKFGKVVYSPKAKLFTRM 234
GG EDY + K G++ Y P+A + R+
Sbjct: 180 GGLRYNTERDWAEDYQFWYDVSKLGRLAYYPEALVKYRL 218
>pir||S75492 spore coat polysaccharide biosynthesis protein spsA - Synechocystis
sp. (strain PCC 6803) >gi|1653137|dbj|BAA18053.1|
(D90911) spore coat polysaccharide biosynthesis protein
SpsA [Synechocystis sp.]
Length = 276
Score = 70.2 bits (169), Expect = 3e-11
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 38 VSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIRIE 97
+SVII YN ++ I +AI++ LSQ Y E+I+VDDGS D + + D R+K +
Sbjct: 11 ISVIITNYNYDQFIDQAIESVLSQTYYNFELIIVDDGSTDNSRDVISSYTDSRIKALVKN 70
Query: 98 HKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFH 139
+ G+A A N G + A GE+I D+D + + + ++ R+H
Sbjct: 71 NGGQASAFNAGFEQANGEIICFLDSDDWWKPEKLETII-RWH 111
>dbj|BAA33749.1| (AB017355) N-acetylglucosaminyltransferase [Streptococcus
agalactiae] >gi|5381186|dbj|BAA82283.1| (AB028896)
CpsIaI [Streptococcus agalactiae]
Length = 333
Score = 70.2 bits (169), Expect = 3e-11
Identities = 36/107 (33%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 38 VSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV--KDERVKVIR 95
VS+IIP YN E +K+ +++ L Q +P+ EVI++DDGS D + E + +D R+ V
Sbjct: 7 VSIIIPIYNSEAYLKECVQSVLQQTHPLIEVILIDDGSTDNSGEICDNLSQEDNRILVFH 66
Query: 96 IEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSED 142
++ G + A N GL + GE I D+D F++ + + +++ +E+
Sbjct: 67 KKNGGVSSARNLGLDKSTGEFITFVDSDDFVAPNMIEIMLKNLITEN 113
>pir||B81289 probable sugar transferase Cj1434c [imported] - Campylobacter
jejuni (strain NCTC 11168) >gi|6968863|emb|CAB73858.1|
(AL139078) putative sugar transferase [Campylobacter
jejuni]
Length = 445
Score = 69.9 bits (168), Expect = 4e-11
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAK--EVKDERVKV 93
PKVS+++P+ N I++ I + L+Q E++ +D S DGT E K E KD+R++V
Sbjct: 7 PKVSIVVPSLNSISYIRECIDSILNQTLKDIEILCIDANSTDGTLEVLKNYEKKDKRLRV 66
Query: 94 IRIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRV 152
I + K +N G+K AKGE + + ++D ++ + RL E D V G +
Sbjct: 67 IISDKKSYGYQMNLGIKEAKGEYLGIVESDDYIKTNMYERLYEIAKKNDCEVVKGDFYI 125
>gb|AAC44016.1| (U40830) EpsI [Streptococcus thermophilus]
>gi|1588813|prf||2209356K epsi gene [Streptococcus
thermophilus]
Length = 324
Score = 69.9 bits (168), Expect = 4e-11
Identities = 38/109 (34%), Positives = 63/109 (56%), Gaps = 2/109 (1%)
Query: 35 KPKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV--KDERVK 92
K +S++IP YN E+ ++K +++ +Q Y EVI+V+DGS D + ++ +D+R
Sbjct: 4 KSLISIVIPVYNVEKYLEKCLQSVQNQTYNNFEVILVNDGSTDSSLSICEKFVNQDKRFS 63
Query: 93 VIRIEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSE 141
V E+ G + A N G+K AKG I D+D ++ +D + LV SE
Sbjct: 64 VFSKENGGMSSARNFGIKKAKGSFITFVDSDDYIVKDYLSHLVAGIKSE 112
>pir||C69052 conserved hypothetical protein MTH1392 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622503|gb|AAB85869.1| (AE000902) dolichyl-phosphate
mannoosyltransferase related protein [Methanobacterium
thermoautotrophicum]
Length = 564
Score = 69.9 bits (168), Expect = 4e-11
Identities = 42/101 (41%), Positives = 62/101 (60%), Gaps = 6/101 (5%)
Query: 38 VSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIR-I 96
VSV+IPA NEE+ + I+AA D V+EVIVVDDGS D T A +D VIR
Sbjct: 25 VSVVIPALNEEKTVGSVIEAARKSDM-VDEVIVVDDGSTDNT---AGAAEDAGATVIRHT 80
Query: 97 EHKGKAGAINEGLKLAKGEVIVVTDAD-SFMSRDAVRRLVE 136
++GK A+ G K ++G+++V DAD M+ + + R+++
Sbjct: 81 SNRGKGAALKTGFKHSRGDIVVFVDADLENMTTEKIERMIK 121
>pir||S49240 hypothetical protein 3 (capsulation locus) - Haemophilus influenzae
(strain RM107) >gi|547513|emb|CAA85752.1| (Z37516) orf3
[Haemophilus influenzae]
Length = 789
Score = 69.5 bits (167), Expect = 6e-11
Identities = 41/116 (35%), Positives = 65/116 (55%), Gaps = 3/116 (2%)
Query: 38 VSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAK--EVKDERVKVIR 95
VS+IIP YN E I K I+ L ++ EV+++DDGS+D T AK D+R ++R
Sbjct: 23 VSIIIPMYNVENLIGKTIEC-LKNNFCKMEVLLIDDGSKDNTVNNAKLAVANDKRFTILR 81
Query: 96 IEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIR 151
E+ G + N G+K KGE I D+D + +A+ +L+ +E+ + G I+
Sbjct: 82 KENSGVSSTRNFGIKKGKGEFIFFCDSDDILEGNAIDKLLIAAFAENADYIYGGIK 137
>pir||B69218 conserved hypothetical protein MTH884 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621978|gb|AAB85382.1| (AE000864) teichoic acid
biosynthesis related protein [Methanobacterium
thermoautotrophicum]
Length = 585
Score = 69.5 bits (167), Expect = 6e-11
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 37/200 (18%)
Query: 37 KVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIRI 96
K+S+IIPAYNEEE + +++ +QD+ EVIV D S+D T + A+E R+
Sbjct: 2 KLSIIIPAYNEEEYLPGLLESIRNQDFDDYEVIVADADSDDNTRKIAREYG------CRV 55
Query: 97 EHKG-KAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDV-VAVGGQIRV-- 152
G A N G A+GE+++ DAD ++ +R VE F SED+ +A+ I +
Sbjct: 56 VDGGMPAVGRNRGAAAARGELLLFLDADLVLTDGYLRDAVEEFESEDLGIAITQMIPIST 115
Query: 153 ---------IVDSFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIGGFV 203
+ F+ ++ I+ Y G L+ RRE E++GGF
Sbjct: 116 RRRDKILHEFANRFMILVESIKPHGAGCY-------------GILT--RRELHEKVGGFD 160
Query: 204 NSLVEDYA-TTKALKKFGKV 222
SL D+ T +++ GK+
Sbjct: 161 ESL--DFGEDTDYIERIGKI 178
>dbj|BAB07376.1| (AP001519) glycosyltransferase [Bacillus halodurans]
Length = 732
Score = 69.5 bits (167), Expect = 6e-11
Identities = 51/171 (29%), Positives = 80/171 (45%), Gaps = 18/171 (10%)
Query: 35 KPKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKE--VKDERVK 92
+PKV+VIIPAYN E+ I +I++ L Q + E++VVDD S DGT K D+RVK
Sbjct: 110 EPKVTVIIPAYNSEDGIATSIESILQQTWTNIEILVVDDCSTDGTTALIKRYAASDDRVK 169
Query: 93 VIRIE-HKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERF--HSEDVVAVGGQ 149
++ E + G A N L+ A GE + + DAD + + V H + + Q
Sbjct: 170 YLKTEINSGAYVARNIALQQAAGEFVTINDADDWSHPAKIETQVNHLLEHPQVIANTSQQ 229
Query: 150 IRVIVDSFLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAFRREALERIG 200
R+ + + +RR K E + + L + +E +G
Sbjct: 230 ARMTEE-------------LTFFRRGKPGEYIFVNMSSLMFRKNPVMENLG 267
>gb|AAA68009.1| (U14554) glycosyl transferase [Neisseria gonorrhoeae]
Length = 348
Score = 69.1 bits (166), Expect = 7e-11
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 23/221 (10%)
Query: 35 KPKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV--KDERVK 92
+P VSV+I AYN E+ +++ A ++Q + ++++VDDGS DGT AK+ +D R+K
Sbjct: 2 QPLVSVLICAYNVEKYFAQSLAAVVNQTWRNLDILIVDDGSTDGTLAIAKDFQKRDSRIK 61
Query: 93 VI-RIEHKGKAGAINEGL-KLAK-----GEVIVVTDADSFMSRDAVRRLV-ERFHSEDVV 144
++ + ++ G ++N GL +LAK GE I TDAD S + ++V E ++
Sbjct: 62 ILAQAQNSGLIPSLNIGLDELAKSGGGGGEYIARTDADDIASPGWIEKIVGEMEKDRSII 121
Query: 145 AVGGQIRVIVDSFLAFIQDIEHLRIAMYRRAKELEDLTL-------APGPLSAFRREALE 197
A+G + V+ + H ++++ ED+ RR ++
Sbjct: 122 AMGAWLEVLSEEKDGNRLARHHKHGKIWKKPTRHEDIAAFFPFGNPIHNNTMIMRRSVID 181
Query: 198 RIGGF----VNSLVEDYATTKALKKFGKVVYSPKAKLFTRM 234
GG EDY + K G++ Y P+A + R+
Sbjct: 182 --GGLRYDTERDWAEDYQFWYDVSKLGRLAYYPEALVKYRL 220
>pir||H71223 probable dolichol-phosphate mannosyltransferase - Pyrococcus
horikoshii >gi|3256436|dbj|BAA29119.1| (AP000001) 353aa
long hypothetical dolichol-phosphate mannosyltransferase
[Pyrococcus horikoshii]
Length = 353
Score = 68.7 bits (165), Expect = 1e-10
Identities = 46/119 (38%), Positives = 68/119 (56%), Gaps = 9/119 (7%)
Query: 37 KVSVIIPAYNEEENIKKA---IKAALS-QDYPVEEVIVVDDGSEDGTYEKAKEV-KDERV 91
KVS+I+P YNE +N+++ I +AL DY E+I+VDD S D T+EKA E+ K V
Sbjct: 2 KVSIIVPTYNERDNLEELFSRISSALKGYDY---EIIIVDDDSPDKTWEKAMELSKLYPV 58
Query: 92 KVIR-IEHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQ 149
KVIR + KG + A+ G A G+V VV DAD + + L+ + +A+ +
Sbjct: 59 KVIRRVNEKGLSSAVIRGFSEASGDVFVVMDADLQHPPEVIPSLLREIEKGNDIAIASR 117
>dbj|BAA84086.1| (AB032065) hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 446
Score = 68.7 bits (165), Expect = 1e-10
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 37 KVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIRI 96
+VS+I+P NEE I A+ + L +D+P E+IVVD GS D T E A VI
Sbjct: 213 QVSIIVPVLNEESTIHSAV-SRLCRDFPDCELIVVDGGSTDATAELAA----LHATVIGS 267
Query: 97 EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVIVDS 156
E +G+A +NEG + A G ++ AD+ + +A+ ++ VVA G +R
Sbjct: 268 E-RGRAKQMNEGARHASGGILWFIHADTAIEPEALGQIRSVLADPAVVAGGLTLR----- 321
Query: 157 FLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAF-RREALERIGGFVN-SLVEDYATTK 214
F + +L RA+ L + G + F RR A + +GGF + +++ED ++
Sbjct: 322 FDRRTPALNYLAWTSNARARRLHHIF---GDQAMFIRRTAFDELGGFPDLAIMEDLEMSR 378
Query: 215 ALKKFGKVVYSPKAKLFTRMPLTLGELWR 243
L + G + P + LT WR
Sbjct: 379 RLHRRGPLRLLPATSTASSRRLTAHGTWR 407
>emb|CAB61873.1| (AL133252) hypothetical protein SCE46.22 [Streptomyces coelicolor
A3(2)]
Length = 232
Score = 68.7 bits (165), Expect = 1e-10
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 37 KVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEVKDERVKVIRI 96
+VS+I+P NEE I A+ + L +D+P E+IVVD GS D T E A VI
Sbjct: 3 QVSIIVPVLNEESTIHSAV-SRLCRDFPDCELIVVDGGSTDATAELAA----LHATVIGS 57
Query: 97 EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVVAVGGQIRVIVDS 156
E +G+A +NEG + A G ++ AD+ + +A+ ++ VVA G +R
Sbjct: 58 E-RGRAKQMNEGARHASGGILWFIHADTAIEPEALGQIRSVLADPAVVAGGLTLR----- 111
Query: 157 FLAFIQDIEHLRIAMYRRAKELEDLTLAPGPLSAF-RREALERIGGFVN-SLVEDYATTK 214
F + +L RA+ L + G + F RR A + +GGF + +++ED ++
Sbjct: 112 FDRRTPALNYLAWTSNARARRLHHIF---GDQAMFIRRTAFDELGGFPDLAIMEDLEMSR 168
Query: 215 ALKKFGKVVYSPKAKLFTRMPLTLGELWR 243
L + G + P + LT WR
Sbjct: 169 RLHRRGPLRLLPATSTASSRRLTAHGTWR 197
>gb|AAF31770.1|AF130984_6 (AF130984) beta-1,3-galactosyltransferase [Campylobacter jejuni]
>gi|6969988|gb|AAF34143.1| (AF167344)
glycosyltransferase [Campylobacter jejuni]
Length = 301
Score = 68.7 bits (165), Expect = 1e-10
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 37 KVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSEDGTYEKAKEV--KDERVKVI 94
K+S+I+P YN E+ I +AI++ ++Q + E+IVVDD D + AKE KD+R+K+I
Sbjct: 3 KISIILPTYNVEQYIARAIESCINQTFKDIEIIVVDDCGNDNSINIAKEYSKKDKRIKII 62
Query: 95 RIE-HKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHSEDVV 144
E + G A EG+K+A I+ D D ++ +A ++ +D V
Sbjct: 63 HNEKNLGLLRARYEGVKVANSPYIMFLDPDDYLELNACEECIKILDEQDEV 113
>emb|CAB87331.1| (AL163672) putative glycosyl transferase [Streptomyces coelicolor
A3(2)]
Length = 765
Score = 68.7 bits (165), Expect = 1e-10
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 36 PKVSVIIPAYNEEENIKKAIKAALSQDYPVEEVIVVDDGSED--GTYEKAKEVKDERVKV 93
P+ SVI+PAY + + +++ L+Q YP EVIVVDDGS D GT D RV+V
Sbjct: 6 PRFSVIVPAYQVQAYLHACLESVLAQSYPDFEVIVVDDGSPDACGTIADEFAALDPRVRV 65
Query: 94 IRI-EHKGKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVER 137
I + ++G A N G++ A G+ +V D D ++ A+R + +R
Sbjct: 66 IGLPRNEGLGPARNAGMERAGGDYLVFLDGDDTLTPHALRGIADR 110
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.326 0.144 0.412
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120949817
Number of Sequences: 2977
Number of extensions: 4945402
Number of successful extensions: 19494
Number of sequences better than 1.0e-10: 74
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 19355
Number of HSP's gapped (non-prelim): 76
length of query: 350
length of database: 189,106,746
effective HSP length: 54
effective length of query: 296
effective length of database: 156,788,448
effective search space: 46409380608
effective search space used: 46409380608
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.6 bits)
S2: 165 (68.7 bits)