BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1324 (PAB1324) DE:STOMATIN-LIKE PROTEIN
(299 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75003 stomatin-like protein PAB1324 - Pyrococcus abyssi (s... 574 e-163
pir||A71159 probable membrane protein - Pyrococcus horikoshii >g... 536 e-152
pir||E72322 conserved hypothetical protein - Thermotoga maritima... 306 2e-82
sp|O26788|Y692_METTH HYPOTHETICAL PROTEIN MTH692 >gi|7447611|pir... 292 4e-78
pir||D75311 conserved hypothetical protein - Deinococcus radiodu... 244 8e-64
emb|CAB94650.1| (AL359215) putative secreted protein. [Streptomy... 238 4e-62
sp|P71768|YE88_MYCTU HYPOTHETICAL 41.2 KDA PROTEIN RV1488 >gi|74... 236 2e-61
pir||T36857 conserved hypothetical protein SCI5.04c - Streptomyc... 235 4e-61
gb|AAF09169.1|AF065260_1 (AF065260) HflC homolog [Clostridium di... 227 1e-58
gi|10955528 77 pct identical to sp:YBBK_ECOLI[hypothetical 33kd ... 219 2e-56
gb|AAG18899.1| (AE004992) bifunctional short chain isoprenyl dip... 217 1e-55
sp|P77367|YBBK_ECOLI HYPOTHETICAL 33.7 KD PROTEIN IN USHA-TESA I... 215 6e-55
pir||F82256 conserved hypothetical protein VC0976 [imported] - V... 214 1e-54
sp|Q58237|Y827_METJA HYPOTHETICAL PROTEIN MJ0827 >gi|2129105|pir... 206 3e-52
pir||A82838 conserved hypothetical protein XF0185 [imported] - X... 202 4e-51
sp|P72655|YB28_SYNY3 HYPOTHETICAL 35.7 KD PROTEIN SLR1128 >gi|74... 202 4e-51
gb|AAK42367.1| Erythrocyte band 7 membrane protein homolog [Sulf... 196 2e-49
gb|AAF42660.1|AF226511_1 (AF226511) membrane protein GNA1220 [Ne... 192 3e-48
pir||F81107 stomatin/Mec-2 family protein NMB1220 [imported] - N... 192 4e-48
gb|AAF44771.1|AF235154_1 (AF235154) GNA1220 [Neisseria gonorrhoe... 192 4e-48
pir||H81907 probable periplasmic protein NMA1382 [imported] - Ne... 192 5e-48
gb|AAF42676.1|AF226528_1 (AF226528) membrane protein GNA1220 [Ne... 192 5e-48
sp|O59180|YF11_PYRHO HYPOTHETICAL PROTEIN PH1511 >gi|7447604|pir... 191 7e-48
gb|AAC46209.1| (AF002133) MAV266 [Mycobacterium avium] 191 7e-48
gb|AAF42668.1|AF226519_1 (AF226519) membrane protein GNA1220 [Ne... 191 7e-48
pir||B75107 stomatin-like protein PAB1933 - Pyrococcus abyssi (s... 191 9e-48
gb|AAF42663.1|AF226514_1 (AF226514) membrane protein GNA1220 [Ne... 190 1e-47
gb|AAF42675.1|AF226527_1 (AF226527) membrane protein GNA1220 [Ne... 190 2e-47
pir||D72522 probable erythrocyte band 7 integral membrane protei... 190 2e-47
gi|11499015 membrane protein [Archaeoglobus fulgidus] >gi|664798... 189 3e-47
pir||F70378 erythrocyte band 7 homolog - Aquifex aeolicus >gi|29... 183 2e-45
pir||T39599 conserved hypothetical protein SPBC16G5.07c - fissio... 183 3e-45
pir||B71689 hypothetical protein RP328 - Rickettsia prowazekii >... 182 3e-45
gi|7305503 stomatin-like protein 2 [Homo sapiens] >gi|6456118|gb... 179 4e-44
gi|11429564 stomatin-like protein 2 [Homo sapiens] 179 4e-44
pir||A83590 probable stomatin-like protein PA0452 [imported] - P... 178 9e-44
gb|AAF29073.1|AF161458_1 (AF161458) HSPC108 [Homo sapiens] 177 1e-43
gb|AAF47110.1| (AE003462) CG2970 gene product [Drosophila melano... 175 4e-43
pir||T21562 hypothetical protein F30A10.5 - Caenorhabditis elega... 173 2e-42
gb|AAF68388.1|AF236372_1 (AF236372) stomatin-like protein [Zea m... 171 9e-42
pir||T02246 hypothetical protein P1.11659_4 - human >gi|2984585|... 169 3e-41
pir||T18493 hypothetical protein C0800w - malaria parasite (Plas... 168 1e-40
pir||T05863 hypothetical protein T29A15.70 - Arabidopsis thalian... 168 1e-40
dbj|BAA97132.1| (AB018115) contains similarity to stomatin like ... 167 1e-40
pir||G69104 stomatin-like protein - Methanobacterium thermoautot... 161 1e-38
gb|AAC64873.1| (AF034831) stomatin like protein [Rhizobium etli] 159 3e-38
emb|CAC12423.1| (AL445067) membrane protein 7, erythrocyte (huma... 155 7e-37
gb|AAF48927.1| (AE003511) CG7633 gene product [Drosophila melano... 153 2e-36
gb|AAF48928.1| (AE003511) CG7635 gene product [Drosophila melano... 150 2e-35
sp|Q27433|MEC2_CAEEL MECHANOSENSORY PROTEIN 2 >gi|2133486|pir||S... 148 7e-35
emb|CAA73876.1| (Y13473) stomatin [Danio rerio] 147 2e-34
emb|CAB76415.1| (Z66565) contains similarity to Pfam domain: PF0... 146 4e-34
pir||T34691 hypothetical protein SC1B5.13c SC1B5.13c - Streptomy... 145 8e-34
sp|Q19200|STO1_CAEEL STO-1 PROTEIN >gi|7447613|pir||T15971 hypot... 141 7e-33
sp|Q22165|STO4_CAEEL STO-4 PROTEIN 141 9e-33
gb|AAF14646.1|AF163772_6 (AF163772) 7138.6 [Leishmania major] 141 9e-33
gb|AAF54744.1| (AE003694) CG17424 gene product [Drosophila melan... 141 1e-32
sp|Q21190|UNC1_CAEEL UNC-1 PROTEIN >gi|7494583|pir||T34324 eryth... 140 2e-32
pir||T27365 hypothetical protein Y71H9A.2 - Caenorhabditis elega... 140 2e-32
gi|4758276 erythrocyte membrane protein band 7.2 (stomatin) [Hom... 140 2e-32
gb|AAA58432.1| (M81635) stomatin peptide [Homo sapiens] 140 2e-32
gb|AAC50296.1| (U33931) band 7.2b stomatin [Homo sapiens] >gi|15... 140 2e-32
sp|P54116|BAN7_MOUSE ERYTHROCYTE BAND 7 INTEGRAL MEMBRANE PROTEI... 139 5e-32
pir||JC5221 stomatin - mouse >gi|975689|emb|CAA62503.1| (X91043)... 139 5e-32
sp|Q19958|STO2_CAEEL STO-2 PROTEIN >gi|7500297|pir||T16240 hypot... 139 5e-32
gi|7710018 erythrocyte protein band 7.2; protein 7.2b [Mus muscu... 138 8e-32
gb|AAC64173.1| (AF093620) stomatin [Mus musculus] 138 8e-32
sp|Q20657|STO3_CAEEL STO-3 PROTEIN >gi|7503947|pir||T22502 hypot... 130 2e-29
gb|AAF54746.1| (AE003694) CG14736 gene product [Drosophila melan... 122 4e-27
gb|AAF52157.1| (AE003607) CG14644 gene product [Drosophila melan... 113 3e-24
gi|7657615 podocin [Homo sapiens] >gi|7363002|emb|CAB83216.1| (A... 106 4e-22
pir||E82334 hflK protein VC0349 [imported] - Vibrio cholerae (gr... 102 6e-21
sp|P40605|HFLK_VIBPA HFLK PROTEIN >gi|507734|gb|AAA62186.1| (U09... 101 1e-20
gb|AAB18857.1| (U50999) stomatin [Mus musculus] 100 2e-20
pir||B72207 ftsH proteinase activity modulator HflC - Thermotoga... 100 2e-20
pir||A82806 integral membrane proteinase XF0452 [imported] - Xyl... 99 6e-20
sp|P25662|HFLK_ECOLI HFLK PROTEIN >gi|280067|pir||B43653 probabl... 97 2e-19
pir||B83028 proteinase subunit HflK PA4942 [imported] - Pseudomo... 97 2e-19
pir||A72207 ftsH proteinase activity modulator HflK - Thermotoga... 97 3e-19
dbj|BAB06873.1| (AP001517) protease specific for phage lambda cI... 95 8e-19
pir||A71722 hflC protein (hflC) RP123 - Rickettsia prowazekii >g... 94 2e-18
pir||A83028 proteinase subunit HflC PA4941 [imported] - Pseudomo... 92 5e-18
sp|P44546|HFLK_HAEIN HFLK PROTEIN >gi|1075179|pir||A64051 probab... 90 2e-17
gb|AAF47921.1| (AE003481) CG7468 gene product [Drosophila melano... 90 3e-17
sp|O51221|HFLK_BORBU HFLK PROTEIN >gi|7463666|pir||C70125 Lambda... 89 8e-17
sp|P25661|HFLC_ECOLI HFLC PROTEIN >gi|280066|pir||C43653 probabl... 88 1e-16
gi|4759148 stomatin-like protein 1 [Homo sapiens] >gi|4160546|em... 87 3e-16
pir||T32977 unc-24 protein - Caenorhabditis elegans >gi|1353669|... 85 7e-16
sp|P57631|HFLK_BUCAI HFLK PROTEIN >gi|10039224|dbj|BAB13258.1| (... 85 7e-16
emb|CAB52016.1| (AL109665) SLP-1 [Homo sapiens] 84 2e-15
gb|AAF06960.1| (AF156557) stomatin related protein [Homo sapiens... 84 2e-15
pir||B82806 integral membrane proteinase XF0453 [imported] - Xyl... 84 2e-15
gi|11432457 stomatin-like protein 1 [Homo sapiens] 84 2e-15
emb|CAB64583.1| (AL135941) hypothetical protein L391.06 [Leishma... 84 2e-15
sp|P57630|HFLC_BUCAI HFLC PROTEIN >gi|10039223|dbj|BAB13257.1| (... 83 3e-15
sp|O83151|HFLK_TREPA HFLK PROTEIN >gi|7521161|pir||H71364 probab... 83 4e-15
gb|AAF03497.1|AC010676_7 (AC010676) unknown protein [Arabidopsis... 80 2e-14
gb|AAF07389.1|AC010675_12 (AC010675) unknown protein; 58197-5941... 80 3e-14
dbj|BAB06874.1| (AP001517) protease specific for phage lambda cI... 80 4e-14
gb|AAF68390.1|AF236374_1 (AF236374) hypersensitive-induced respo... 79 7e-14
gb|AAF68391.1|AF236375_1 (AF236375) hypersensitive-induced respo... 78 2e-13
gb|AAF68389.1|AF236373_1 (AF236373) hypersensitive-induced respo... 77 3e-13
pir||I39620 hypothetical protein X - Anabaena variabilis (fragme... 76 4e-13
pir||E83340 hypothetical protein PA2438 [imported] - Pseudomonas... 76 6e-13
emb|CAC07434.1| (AJ292360) putative membrane protein [Zea mays] 75 8e-13
dbj|BAB08673.1| (AB018109) gb|AAF03497.1~gene_id:K17N15.12~simil... 73 3e-12
pir||C81445 probable transmembrane protein Cj0268c [imported] - ... 73 4e-12
dbj|BAB10843.1| (AB009053) hypersensitive-induced response prote... 73 5e-12
emb|CAB64584.1| (AL135941) hypothetical protein L391.07 [Leishma... 72 7e-12
sp|P44545|HFLC_HAEIN HFLC PROTEIN >gi|1074959|pir||I64050 probab... 71 2e-11
emb|CAA10289.1| (AJ131049) hypothetical protein [Cicer arietinum] 71 2e-11
gb|AAD42031.1|AF074953_1 (AF074953) stomatin-like protein UNC24 ... 69 6e-11
>pir||F75003 stomatin-like protein PAB1324 - Pyrococcus abyssi (strain Orsay)
>gi|5458982|emb|CAB50468.1| (AJ248288) STOMATIN-LIKE
PROTEIN [Pyrococcus abyssi]
Length = 299
Score = 574 bits (1464), Expect = e-163
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 1 MMISAGGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERV 60
MMISAGGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERV
Sbjct: 1 MMISAGGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERV 60
Query: 61 KVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNL 120
KVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNL
Sbjct: 61 KVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNL 120
Query: 121 RAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQM 180
RAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQM
Sbjct: 121 RAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQM 180
Query: 181 TAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEAL 240
TAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEAL
Sbjct: 181 TAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEAL 240
Query: 241 KMADEKYLTLQYIEKLPDLAKYGNLIVPYDTESLIGLLRVLQKVKSIPLQQSTEKKIEE 299
KMADEKYLTLQYIEKLPDLAKYGNLIVPYDTESLIGLLRVLQKVKSIPLQQSTEKKIEE
Sbjct: 241 KMADEKYLTLQYIEKLPDLAKYGNLIVPYDTESLIGLLRVLQKVKSIPLQQSTEKKIEE 299
>pir||A71159 probable membrane protein - Pyrococcus horikoshii
>gi|3256875|dbj|BAA29558.1| (AP000002) 298aa long
hypothetical membrane protein [Pyrococcus horikoshii]
Length = 298
Score = 536 bits (1367), Expect = e-152
Identities = 271/294 (92%), Positives = 287/294 (97%)
Query: 2 MISAGGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVK 61
MI AGG+ALIILG+FLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVK
Sbjct: 5 MIGAGGIALIILGLFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVK 64
Query: 62 VVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLR 121
+VDLREHVIDVPPQEVICKDNVVVTVDAVVYYQ++DPVKAVYNVSDFLMAIVKLAQTNLR
Sbjct: 65 IVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQVIDPVKAVYNVSDFLMAIVKLAQTNLR 124
Query: 122 AIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMT 181
AIIGEMELDETLSGRDIINA+LREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMT
Sbjct: 125 AIIGEMELDETLSGRDIINARLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMT 184
Query: 182 AEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALK 241
AEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALK
Sbjct: 185 AEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALK 244
Query: 242 MADEKYLTLQYIEKLPDLAKYGNLIVPYDTESLIGLLRVLQKVKSIPLQQSTEK 295
+ADEKYL LQYIEKLP+LA+YGNLIVPYDTESL+GLLR++QK++S P + E+
Sbjct: 245 LADEKYLALQYIEKLPELARYGNLIVPYDTESLVGLLRMIQKIRSTPAGEKKEE 298
>pir||E72322 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981401|gb|AAD35948.1|AE001753_4 (AE001753)
conserved hypothetical protein [Thermotoga maritima]
Length = 305
Score = 306 bits (776), Expect = 2e-82
Identities = 158/292 (54%), Positives = 216/292 (73%), Gaps = 15/292 (5%)
Query: 8 VALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLRE 67
+AL++L FL+++ S++++RPY++GLVERLGKF R + G+HFIIPF ER+ VD+RE
Sbjct: 3 IALVVLVFFLIVLAASSIRIVRPYERGLVERLGKFKREVGAGVHFIIPFFERMIKVDMRE 62
Query: 68 HVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEM 127
VIDVPPQEVI +DNVVVTVDAV+YY+I D + VYNVS+F MA +KLAQTNLR +IGE+
Sbjct: 63 KVIDVPPQEVITRDNVVVTVDAVIYYEITDAYRVVYNVSNFEMATIKLAQTNLRNVIGEL 122
Query: 128 ELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKR 187
ELD+TL+ R+ IN KLR LD+ TD+WGV+ITRVEI++IDPP+DI +AM+KQM AER KR
Sbjct: 123 ELDQTLTSRERINMKLRTVLDEATDKWGVRITRVEIKKIDPPQDITDAMSKQMKAERTKR 182
Query: 188 AMILIAEGKKEAAIREAEGQKQAAILKAEGE-----------KQRQILIAEGQAEAIRKV 236
A IL AEG K+A I +AEGQK AAIL+AEGE Q+ IL A GQAEAI+ V
Sbjct: 183 AAILEAEGYKQAEILKAEGQKNAAILRAEGEAEAIKRVAEANMQKLILEARGQAEAIKLV 242
Query: 237 LEALKMAD--EKYLTLQYIEKLPDLA--KYGNLIVPYDTESLIGLLRVLQKV 284
A+ + + LT++Y+E L ++A + + +P++ S++ L + ++
Sbjct: 243 FNAIHEGNPTKDLLTVRYLETLKEMANGQATKIFLPFEASSILASLGAISEI 294
>sp|O26788|Y692_METTH HYPOTHETICAL PROTEIN MTH692 >gi|7447611|pir||C69192 stomatin-like
protein - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2621777|gb|AAB85197.1| (AE000848)
stomatin-like protein [Methanobacterium
thermoautotrophicum]
Length = 318
Score = 292 bits (739), Expect = 4e-78
Identities = 150/293 (51%), Positives = 209/293 (71%), Gaps = 15/293 (5%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLREHVI 70
+I+ + LL++ S+K++RPY+KG+VERLGK+ R ++ G+ IIPF+E +K VD+RE V+
Sbjct: 5 LIIVLVLLVLAFKSLKILRPYEKGVVERLGKYQRTVESGLVVIIPFIEAIKKVDMREQVV 64
Query: 71 DVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELD 130
DVPPQEVI KDN VV VD V++Y+++DP AVYNV DF AI KLAQTNLR IIG++ELD
Sbjct: 65 DVPPQEVITKDNTVVVVDCVIFYEVVDPFNAVYNVVDFYQAITKLAQTNLRNIIGDLELD 124
Query: 131 ETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMI 190
+TL+ R++IN +LRE LD+ TD+WG ++ RVEIQRI+PP DI EAM+KQM AER KRA I
Sbjct: 125 QTLTSREMINTQLREVLDEATDKWGTRVVRVEIQRIEPPGDIVEAMSKQMKAERMKRAAI 184
Query: 191 LIAEGKKEAAIREAEGQKQAAILKAEGE-----------KQRQILIAEGQAEAIRKVLEA 239
L AEG K++ I+ AEG KQAAIL+AEG+ K R+I IAEGQA+AI V A
Sbjct: 185 LEAEGYKQSEIKRAEGDKQAAILEAEGKAEAIKKVADANKYREIAIAEGQAKAILSVFRA 244
Query: 240 LKMAD--EKYLTLQYIEKLPDLA--KYGNLIVPYDTESLIGLLRVLQKVKSIP 288
+ D + L+Y+E L +A + +++P + ++G + + ++ S P
Sbjct: 245 MHEGDPTNDIIALKYLEALEKVADGRATKILLPVEATGILGSIAGISEMLSDP 297
>pir||D75311 conserved hypothetical protein - Deinococcus radiodurans (strain
R1) >gi|6459936|gb|AAF11687.1|AE002048_7 (AE002048)
conserved hypothetical protein [Deinococcus radiodurans]
Length = 344
Score = 244 bits (617), Expect = 8e-64
Identities = 132/292 (45%), Positives = 193/292 (65%), Gaps = 15/292 (5%)
Query: 8 VALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERV-KVVDLR 66
+ +++L + ++I LL +K + + ER GKF R L PG++ IIP+++R+ + V++
Sbjct: 5 IFVVVLVLLVIITLLAGIKSVPQGNEWTQERFGKFQRTLKPGLNLIIPYIDRIGRKVNMM 64
Query: 67 EHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGE 126
E V DVP QE+I KDN +VTVDAVV+YQ+LD KA Y V + A++ L TN+R + G
Sbjct: 65 EQVFDVPSQEIITKDNALVTVDAVVFYQVLDAAKASYEVRNLEQAVLNLTMTNIRTVTGS 124
Query: 127 MELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREK 186
M+LDE LS RD INAKL +D+ T+ WGVK+TR+E++ I PP D+ +MA+QM AEREK
Sbjct: 125 MDLDELLSNRDTINAKLLVVVDEATEPWGVKVTRIEVKDIKPPADLVASMARQMKAEREK 184
Query: 187 RAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQIL-------IAEGQAEAIRKVLEA 239
RA IL AEG ++AAI +A+G+KQAA+LKAEGEKQ + A+ +AEA R V +A
Sbjct: 185 RANILDAEGFRQAAILKADGEKQAAVLKAEGEKQASFMESEARERRAQAEAEATRVVSQA 244
Query: 240 LK----MADEKYLTLQYIEKLPDLAKYGN---LIVPYDTESLIGLLRVLQKV 284
+ A ++ QY+E L D+A N LI+P + S++G L+ + +V
Sbjct: 245 IAGGNVQAVNYFIAQQYVEALRDVASAPNQKTLILPIEATSILGSLQGIAEV 296
>emb|CAB94650.1| (AL359215) putative secreted protein. [Streptomyces coelicolor
A3(2)]
Length = 343
Score = 238 bits (602), Expect = 4e-62
Identities = 127/302 (42%), Positives = 203/302 (67%), Gaps = 9/302 (2%)
Query: 1 MMISAGGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERV 60
M SA +A +I+ + + ++ +V+++ + VERLG+++R L PG+ +IP+++RV
Sbjct: 3 MEASAFLIAGVIVALLAVFTVVRAVRIVPQARARNVERLGRYHRTLKPGLSVVIPYIDRV 62
Query: 61 -KVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTN 119
V+DLRE V+ PQ VI +DN+VV +D V+Y+Q+ DP A Y +++FL A+ +L T
Sbjct: 63 YPVIDLREQVVSFKPQPVITEDNLVVEIDTVLYFQVTDPRAAFYEIANFLQAVEQLTVTT 122
Query: 120 LRAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQ 179
LR ++G M+L++TL+ RD IN++LR LD+ T +WG+++ RVEI+ IDPP+ I++AM KQ
Sbjct: 123 LRNVVGSMDLEKTLTSRDTINSQLRGVLDEATGKWGLRVNRVEIKAIDPPQSIKDAMQKQ 182
Query: 180 MTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEA 239
M AER+KRA IL AEG++++ I AEG KQAA+L+AEG + +IL AEGQ+ AI +V +A
Sbjct: 183 MRAERDKRAAILGAEGQRQSQILTAEGDKQAAVLRAEGNRTAEILKAEGQSRAIDEVFQA 242
Query: 240 LKM--ADEKYLTLQYIEKLPDLAKYGN---LIVPYD-TESLIGLLRVLQKVKSIPLQQST 293
+ D K L QY++ LP LA+ ++P + T +L G+ R +++P +T
Sbjct: 243 VHRNDPDPKLLAYQYLQVLPQLAQGSGSTFWVIPSEVTSALQGVSRAF--TEALPQSPAT 300
Query: 294 EK 295
+
Sbjct: 301 RE 302
>sp|P71768|YE88_MYCTU HYPOTHETICAL 41.2 KDA PROTEIN RV1488 >gi|7476783|pir||C70711
hypothetical protein Rv1488 - Mycobacterium tuberculosis
(strain H37RV) >gi|1524234|emb|CAB02038.1| (Z79701)
hypothetical protein Rv1488 [Mycobacterium tuberculosis]
Length = 381
Score = 236 bits (597), Expect = 2e-61
Identities = 135/309 (43%), Positives = 196/309 (62%), Gaps = 31/309 (10%)
Query: 5 AGGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKV-V 63
AG V L +L IF +I++ SV +I + ++ERLG+++R + + ++PF++RV+ V
Sbjct: 6 AGLVFLAVLVIFAIIVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDRVRARV 65
Query: 64 DLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAI 123
DLRE V+ PPQ VI +DN+ + +D VVY+Q+ P AVY +S++++ + +L T LR +
Sbjct: 66 DLRERVVSFPPQPVITEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNV 125
Query: 124 IGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAE 183
+G M L++TL+ RD INA+LR LD+ T RWG+++ RVE++ IDPP IQ +M KQM A+
Sbjct: 126 VGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRVARVELRSIDPPPSIQASMEKQMKAD 185
Query: 184 REKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAE---------------- 227
REKRAMIL AEG +EAAI++AEGQKQA IL AEG KQ IL AE
Sbjct: 186 REKRAMILTAEGTREAAIKQAEGQKQAQILAAEGAKQAAILAAEADRQSRMLRAQGERAA 245
Query: 228 ------GQAEAIRKVLEALKMA--DEKYLTLQYIEKLPDLAKYGNL----IVPYD-TESL 274
GQA+AI K A+K + L QY++ LP++A+ G+ +VP D +L
Sbjct: 246 AYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQTLPEMAR-GDANKVWVVPSDFNAAL 304
Query: 275 IGLLRVLQK 283
G R+L K
Sbjct: 305 QGFTRLLGK 313
>pir||T36857 conserved hypothetical protein SCI5.04c - Streptomyces coelicolor
>gi|5123532|emb|CAB45288.1| (AL079332) conserved
hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 319
Score = 235 bits (594), Expect = 4e-61
Identities = 116/257 (45%), Positives = 179/257 (69%), Gaps = 3/257 (1%)
Query: 8 VALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKV-VDLR 66
+ LIIL + + I L+ +++VI +VER G++ R L+ G++ ++PF++ ++ +DLR
Sbjct: 6 IVLIILVVLVFIALIKTIQVIPQASAAIVERFGRYTRTLNAGLNIVVPFIDTIRNRIDLR 65
Query: 67 EHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGE 126
E V+ PPQ VI +DN+VV +D V+YYQ+ D A Y V+ ++ AI +L T LR IIG
Sbjct: 66 EQVVPFPPQPVITQDNLVVNIDTVIYYQVTDARAATYEVASYIQAIEQLTVTTLRNIIGG 125
Query: 127 MELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREK 186
M+L+ TL+ R+ INA LR LD+ T +WG+++ RVE++ I+PP IQ++M KQM A+R+K
Sbjct: 126 MDLERTLTSREEINAALRGVLDEATGKWGIRVNRVELKAIEPPTSIQDSMEKQMRADRDK 185
Query: 187 RAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALKMA--D 244
RA IL AEG +++ I AEG+KQ+ IL+AEGE + L AEG+A+A+R V EA+ D
Sbjct: 186 RAAILQAEGVRQSEILRAEGEKQSQILRAEGEAKAAALRAEGEAQAVRTVFEAIHAGDPD 245
Query: 245 EKYLTLQYIEKLPDLAK 261
+K L+ QY++ LP +A+
Sbjct: 246 QKLLSYQYLQMLPKIAE 262
>gb|AAF09169.1|AF065260_1 (AF065260) HflC homolog [Clostridium difficile]
Length = 320
Score = 227 bits (573), Expect = 1e-58
Identities = 132/315 (41%), Positives = 192/315 (60%), Gaps = 46/315 (14%)
Query: 11 IILGIFLLIML----LLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVK-VVDL 65
I+L I L++++ L ++VI+ + G++ RLGKF ++ + G+HF+IPF++++ V+DL
Sbjct: 5 IVLSIVLIVVVVAISLTCIRVIKQSKVGIIMRLGKFQKVAETGVHFLIPFLDKMAYVIDL 64
Query: 66 REHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIG 125
RE VID PPQ VI KDNV + +D VVYY++ DPV+ V+ +++ + AI L T LR IIG
Sbjct: 65 REIVIDFPPQPVITKDNVTMQIDTVVYYKVTDPVRYVFEIANPIAAIENLTATTLRNIIG 124
Query: 126 EMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAERE 185
E++LDETL+ + K D+ TD+WG+K+ RVE++ I PP+DIQ AM KQM AERE
Sbjct: 125 ELDLDETLTSQRYNKCKNENYPDEATDKWGIKVNRVELKNIMPPQDIQVAMEKQMRAERE 184
Query: 186 KRAMILIAEGKKEAAIREAEGQKQAAILK-----------AEGEKQRQILIAEGQAEAIR 234
+R IL AEG K AAI +AEG+KQ+AIL AEGEK+ IL+AEG+AEAIR
Sbjct: 185 RREAILQAEGNKSAAILQAEGEKQSAILTAEAKKEAMVRVAEGEKESAILVAEGEAEAIR 244
Query: 235 K--------------------------VLEALKMA--DEKYLTLQYIEKLPDLA--KYGN 264
+ V A+K A D L L+ +E L +A K
Sbjct: 245 QTAIAKAQGEAEMIKRTQMATAEGLKLVFSAMKEADIDNNILALKSMEALEKMAEGKSTK 304
Query: 265 LIVPYDTESLIGLLR 279
L++P + + +G +
Sbjct: 305 LVLPSEAVNFLGTFK 319
>gi|10955528 77 pct identical to sp:YBBK_ECOLI[hypothetical 33kd protein of E.
coli] [Escherichia coli] >gi|9971722|dbj|BAB12673.1|
(AP002527) 77 pct identical to
sp:YBBK_ECOLI[hypothetical 33kd protein of E. coli]
[Escherichia coli]
Length = 325
Score = 219 bits (553), Expect = 2e-56
Identities = 122/296 (41%), Positives = 184/296 (61%), Gaps = 19/296 (6%)
Query: 8 VALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERV-KVVDLR 66
+ L++L + LI + +VK++ VER GK+ L PG+HF+IPFM+R+ + +++
Sbjct: 13 IPLLLLILVALIFVKSAVKIVPQGNAWTVERFGKYTHTLSPGLHFLIPFMDRIGQRINMM 72
Query: 67 EHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGE 126
E V+DVP QEVI KDN VT+DAV + Q++D KA Y V + AI L TN+R ++G
Sbjct: 73 ETVLDVPKQEVISKDNANVTIDAVCFIQVIDAAKAAYEVDNLASAISNLVMTNIRTVVGG 132
Query: 127 MELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREK 186
M LD+ LS RD IN+KL +D TD WG+K+TR+EI+ + PP+++ +AM QM AER K
Sbjct: 133 MNLDDMLSQRDSINSKLLTVVDYATDPWGIKVTRIEIRDVKPPEELTKAMNAQMKAERTK 192
Query: 187 RAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQIL-------IAEGQAEAIRKVLEA 239
RA IL AEG +++ I +AEG+KQ+ ILKAEGE+Q L AE +A A + V +A
Sbjct: 193 RAQILEAEGIRQSQILKAEGEKQSQILKAEGERQSAFLQSEARERQAEAEARATKLVSDA 252
Query: 240 LKMADEK----YLTLQYIEKLPDLAKYGN---LIVPYDTESLI----GLLRVLQKV 284
+ D + ++ +Y E L + N +++P D+ SL+ G+ +L+ V
Sbjct: 253 IAEGDVQSVNYFIAQKYTEALQAIGTASNSKLVMMPLDSSSLVSSVAGISELLKNV 308
>gb|AAG18899.1| (AE004992) bifunctional short chain isoprenyl diphosphate synthase;
Ids [Halobacterium sp. NRC-1]
Length = 392
Score = 217 bits (547), Expect = 1e-55
Identities = 113/279 (40%), Positives = 182/279 (64%), Gaps = 10/279 (3%)
Query: 6 GGVALIILGIFLLIMLLL----SVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVK 61
GG ++G+ LL++L + +V+++ Y+K + G++ LL+PGI+ I PF+ R
Sbjct: 24 GGSLTTVVGLLLLVLLAVVVYETVQIVDAYEKQALTVFGEYRGLLEPGINVIPPFVSRTY 83
Query: 62 VVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLR 121
D+R IDVP QE I +DN VT DAVVY ++ D +A V D+ A+ LAQT LR
Sbjct: 84 TFDMRTQTIDVPRQEAITRDNSPVTADAVVYIRVRDAKRAFLEVDDYKTAVSNLAQTTLR 143
Query: 122 AIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMT 181
A++G+MELD+TL+ R IN+++R ELD+ TD WG+++ VE++ ++P +++Q+AM +Q +
Sbjct: 144 AVLGDMELDDTLNKRQEINSRIRTELDEPTDEWGIRVESVEVREVNPSQEVQQAMEQQTS 203
Query: 182 AEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEA-- 239
AER +RAMIL A+G++++AI A+G KQ+ I++A+GEKQ QIL E Q +AI VL A
Sbjct: 204 AERRRRAMILEAQGERQSAIENAQGDKQSNIIRAQGEKQSQIL--EAQGDAISTVLRAKS 261
Query: 240 LKMADEKYLTLQYIEKLPDL--AKYGNLIVPYDTESLIG 276
+ E+ + + +E L + + ++P + SL+G
Sbjct: 262 AESMGERAIIEKGMETLEGIGEGESNTFVLPQEVTSLVG 300
>sp|P77367|YBBK_ECOLI HYPOTHETICAL 33.7 KD PROTEIN IN USHA-TESA INTERGENIC REGION
>gi|7447609|pir||H64779 probable membrane protein ybbK -
Escherichia coli >gi|1773171|gb|AAB40243.1| (U82664)
similar to M. tuberculosis MTCY277.09 [Escherichia coli]
>gi|1786697|gb|AAC73591.1| (AE000155) putative protease
[Escherichia coli K12]
Length = 305
Score = 215 bits (541), Expect = 6e-55
Identities = 115/285 (40%), Positives = 179/285 (62%), Gaps = 18/285 (6%)
Query: 10 LIILGIFLLIMLLL---SVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERV-KVVDL 65
LI + I + + L++ VK++ + VER G++ + L PG+ ++PFM+R+ + +++
Sbjct: 2 LIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKINM 61
Query: 66 REHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIG 125
E V+D+P QEVI KDN VT+DAV + Q++D +A Y VS+ +AI+ L TN+R ++G
Sbjct: 62 MEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLG 121
Query: 126 EMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAERE 185
MELDE LS RD IN++L +D+ T+ WG+K+TR+EI+ + PP ++ +M QM AER
Sbjct: 122 SMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERT 181
Query: 186 KRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQIL-------IAEGQAEAIRKVLE 238
KRA IL AEG ++A I +AEG+KQ+ ILKAEGE+Q L AE +A A + V E
Sbjct: 182 KRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVSE 241
Query: 239 ALKMAD----EKYLTLQYIEKLPDLAKYGN---LIVPYDTESLIG 276
A+ D ++ +Y E L + N +++P + SL+G
Sbjct: 242 AIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMPLEASSLMG 286
>pir||F82256 conserved hypothetical protein VC0976 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9655437|gb|AAF94138.1|
(AE004179) conserved hypothetical protein [Vibrio
cholerae]
Length = 306
Score = 214 bits (539), Expect = 1e-54
Identities = 120/284 (42%), Positives = 172/284 (60%), Gaps = 15/284 (5%)
Query: 8 VALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERV-KVVDLR 66
+ + +L + ++I + +VK + VER G++ + L PG++ IIPF++RV +++
Sbjct: 7 ITIAVLVLAVVIFISSAVKTVPQGNNWTVERFGRYTQTLKPGLNLIIPFIDRVGHKINMM 66
Query: 67 EHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGE 126
E V+D+P QEVI KDN V +DAV + Q++D KA Y VS AI L TN+R ++G
Sbjct: 67 EQVLDIPAQEVISKDNANVVIDAVCFVQVIDAAKAAYEVSQLQHAIRNLTLTNMRTVLGS 126
Query: 127 MELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREK 186
MELDE LS RD+IN KL +D T WGVK+TR+EI+ + PP D+ AM QM AER K
Sbjct: 127 MELDEMLSQRDMINTKLLSIVDHATSPWGVKVTRIEIKDVQPPADLTAAMNAQMKAERNK 186
Query: 187 RAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQIL-------IAEGQAEAIRKVLEA 239
RA +L AEG ++A I AEGQKQ+ ILKAEGEKQ IL AE +A+A V EA
Sbjct: 187 RAEVLEAEGVRQAQILRAEGQKQSEILKAEGEKQAAILQAEARERAAEAEAKATTMVSEA 246
Query: 240 LKMADEK----YLTLQYIEKLPDLAKYGN---LIVPYDTESLIG 276
+ D + ++ Y E L + + N +++P + L+G
Sbjct: 247 IAKGDMQAVNYFIAQGYTEALKAIGQAENGKIIMLPLEATGLMG 290
>sp|Q58237|Y827_METJA HYPOTHETICAL PROTEIN MJ0827 >gi|2129105|pir||C64403 membrane
protein homolog - Methanococcus jannaschii
>gi|1591514|gb|AAB98826.1| (U67526) membrane protein,
putative regulator of cation conductance [Methanococcus
jannaschii]
Length = 199
Score = 206 bits (518), Expect = 3e-52
Identities = 103/187 (55%), Positives = 138/187 (73%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLREHVI 70
+ILGI L +++ ++ ++ Y+ GL+ RLG+ L PGI+ IIPF++ VD+R V
Sbjct: 11 LILGIIALFIIVKAIVIVNQYEGGLIFRLGRVIGKLKPGINIIIPFLDVPVKVDMRTRVT 70
Query: 71 DVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELD 130
D+PPQE+I KDN VV VDAVVYY+++D KA+ V D+ AI+ LAQT LRAIIG MELD
Sbjct: 71 DIPPQEMITKDNAVVKVDAVVYYRVIDVEKAILEVEDYEYAIINLAQTTLRAIIGSMELD 130
Query: 131 ETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMI 190
E L+ R+ IN+KL E LD+ TD WGV+I +VE++ IDPP+DI+ AMA+QM AER KRA I
Sbjct: 131 EVLNKREYINSKLLEILDRETDAWGVRIEKVEVKEIDPPEDIKNAMAQQMKAERLKRAAI 190
Query: 191 LIAEGKK 197
L AEG+K
Sbjct: 191 LEAEGEK 197
>pir||A82838 conserved hypothetical protein XF0185 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9104984|gb|AAF82998.1|AE003872_9 (AE003872)
conserved hypothetical protein [Xylella fastidiosa]
Length = 337
Score = 202 bits (509), Expect = 4e-51
Identities = 111/290 (38%), Positives = 183/290 (62%), Gaps = 16/290 (5%)
Query: 2 MISAGGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERV- 60
M+ +ALI+L + +I+L SV ++ + VE+ G++ + PG+HF+IP + V
Sbjct: 20 MLPNNVLALIVL-VAGVILLFKSVIMVPQGYEWTVEKFGRYTDTMKPGLHFLIPLIYSVG 78
Query: 61 KVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNL 120
+ V + E V+ VP QEVI KDN V VD VV++Q+LD KA Y V++ +A++ L QTN+
Sbjct: 79 RKVSMMEQVLAVPSQEVITKDNAGVRVDGVVFFQVLDAAKAAYEVANLEIAMIALVQTNI 138
Query: 121 RAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQM 180
R ++G ++ DE+LS R+ INAKL ++ T WGVK+TR++I+ I PP ++ E+M +Q
Sbjct: 139 RTVVGSIDFDESLSQRETINAKLLSVVEHATSPWGVKVTRIDIKDIQPPHNLAESMQQQK 198
Query: 181 TAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQI-------LIAEGQAEAI 233
AE+ +RA IL AEG +++AI A+G+KQAA+++AEG K+ +AE +A+A
Sbjct: 199 MAEQTRRATILEAEGVRQSAILRADGEKQAAVMEAEGRKEAAFRDAEARERLAEAEAKAT 258
Query: 234 RKVLEALKMADEK----YLTLQYIEKLPDLAKYGN---LIVPYDTESLIG 276
R + EA+ + + ++ +Y+E +LA N +++P +T +IG
Sbjct: 259 RILSEAISQGNVQAVNYFVAQKYVEAFKELATAPNQKFILMPMETSGIIG 308
>sp|P72655|YB28_SYNY3 HYPOTHETICAL 35.7 KD PROTEIN SLR1128 >gi|7447608|pir||S74505
erthyrocyte band 7 integral membrane protein -
Synechocystis sp. (strain PCC 6803)
>gi|1651729|dbj|BAA16657.1| (D90899) erthyrocyte band 7
integral membrane protein, protein 7.2B, stomatin
[Synechocystis sp.]
Length = 321
Score = 202 bits (509), Expect = 4e-51
Identities = 109/222 (49%), Positives = 151/222 (67%), Gaps = 3/222 (1%)
Query: 24 SVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDL-REHVIDVPPQEVICKDN 82
SVK++ + LVERLG +N+ L PG++F +P ++RV RE VID+PPQ I KDN
Sbjct: 19 SVKIVNEKNEYLVERLGSYNKKLTPGLNFTVPILDRVVFKQTTREKVIDIPPQSCITKDN 78
Query: 83 VVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAK 142
V +T DAVVY++I+D KA Y V + A+V L T +R+ IG++ELD+T + R IN
Sbjct: 79 VAITADAVVYWRIIDMEKAYYKVENLQSAMVNLVLTQIRSEIGKLELDQTFTARTEINEL 138
Query: 143 LREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIR 202
L ELD TD WGVK+TRVE++ I P K + ++M QMTAER+KRA IL +EG++++AI
Sbjct: 139 LLRELDISTDPWGVKVTRVELRDIMPSKAVLDSMELQMTAERKKRAAILTSEGQRDSAIN 198
Query: 203 EAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALKMAD 244
A+G QA +L+AE +K+ IL AE AE +KVLEA A+
Sbjct: 199 SAQGDAQARVLEAEAKKKAAILNAE--AEQQKKVLEAKATAE 238
>gb|AAK42367.1| Erythrocyte band 7 membrane protein homolog [Sulfolobus
solfataricus]
Length = 267
Score = 196 bits (494), Expect = 2e-49
Identities = 97/201 (48%), Positives = 150/201 (74%), Gaps = 1/201 (0%)
Query: 1 MMISAGG-VALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMER 59
M IS G V ++ L I ++I + +S +V+R +++ +V RLG+F R+ PGI F+IPF++R
Sbjct: 1 MAISIGDIVGIVFLIIIIIIFIAMSFRVVREWERAVVLRLGRFLRVKGPGIIFLIPFVDR 60
Query: 60 VKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTN 119
VVDLR + ++VPPQ ++ KDNV V+VDAVVYY+++DP KAV +V ++ +A++ LAQT+
Sbjct: 61 PLVVDLRVNTVEVPPQTILTKDNVTVSVDAVVYYKVVDPQKAVLSVFNYNVAVLNLAQTS 120
Query: 120 LRAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQ 179
LR I+G+MELDE LS R+ IN +++E LD T+ WG+K+T V I+ I +D+ AMAKQ
Sbjct: 121 LRDIVGQMELDELLSKREEINKRIQEILDVTTEGWGIKVTAVTIRDIRLSQDLLSAMAKQ 180
Query: 180 MTAEREKRAMILIAEGKKEAA 200
AER +RA ++++EG+++AA
Sbjct: 181 AEAERLRRAKVILSEGERQAA 201
>gb|AAF42660.1|AF226511_1 (AF226511) membrane protein GNA1220 [Neisseria meningitidis]
>gi|7228856|gb|AAF42662.1|AF226513_1 (AF226513) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228860|gb|AAF42664.1|AF226515_1 (AF226515) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228864|gb|AAF42666.1|AF226517_1 (AF226517) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228866|gb|AAF42667.1|AF226518_1 (AF226518) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228871|gb|AAF42669.1|AF226521_1 (AF226521) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228875|gb|AAF42671.1|AF226523_1 (AF226523) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228891|gb|AAF42679.1|AF226531_1 (AF226531) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228901|gb|AAF42684.1|AF226536_1 (AF226536) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228903|gb|AAF42685.1|AF226537_1 (AF226537) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228907|gb|AAF42687.1|AF226539_1 (AF226539) membrane
protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 192 bits (484), Expect = 3e-48
Identities = 121/303 (39%), Positives = 179/303 (58%), Gaps = 29/303 (9%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHV 69
IIL + + + S VI + +VERLG+F+R L G++ +IPF++RV L+E
Sbjct: 5 IILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSLKEIP 64
Query: 70 IDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMEL 129
+DVP Q I +DN +TVD ++Y+Q+ DP A Y S+++MAI +LAQT LR++IG MEL
Sbjct: 65 LDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRMEL 124
Query: 130 DETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAM 189
D+T RD IN+ + LD+ WGVK+ R EI+ + PP++I +M Q+TAEREKRA
Sbjct: 125 DKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRAR 184
Query: 190 ILIAEGKK-----------EAAIREAEGQKQAA-----------ILKAEGEKQRQILIAE 227
I +EG+K EA I+++EG+ QAA I +A+GE + L+AE
Sbjct: 185 IAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAE 244
Query: 228 GQAEAIRKVLEALKM---ADEKYLTL--QYIEKLPDLAKYGN-LIVPYDTESLIGLLRVL 281
AEAIR++ AL+ AD L + QY+ +LAK N LI+P + + L+
Sbjct: 245 ANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAG 304
Query: 282 QKV 284
K+
Sbjct: 305 MKI 307
>pir||F81107 stomatin/Mec-2 family protein NMB1220 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7226459|gb|AAF41602.1| (AE002470) stomatin/Mec-2
family protein [Neisseria meningitidis MC58]
>gi|7228873|gb|AAF42670.1|AF226522_1 (AF226522) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228877|gb|AAF42672.1|AF226524_1 (AF226524) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228879|gb|AAF42673.1|AF226525_1 (AF226525) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228881|gb|AAF42674.1|AF226526_1 (AF226526) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228887|gb|AAF42677.1|AF226529_1 (AF226529) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228889|gb|AAF42678.1|AF226530_1 (AF226530) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228893|gb|AAF42680.1|AF226532_1 (AF226532) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228899|gb|AAF42683.1|AF226535_1 (AF226535) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228905|gb|AAF42686.1|AF226538_1 (AF226538) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228909|gb|AAF42688.1|AF226540_1 (AF226540) membrane
protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 192 bits (483), Expect = 4e-48
Identities = 121/303 (39%), Positives = 179/303 (58%), Gaps = 29/303 (9%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHV 69
IIL + + + S VI + +VERLG+F+R L G++ +IPF++RV L+E
Sbjct: 5 IILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSLKEIP 64
Query: 70 IDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMEL 129
+DVP Q I +DN +TVD ++Y+Q+ DP A Y S+++MAI +LAQT LR++IG MEL
Sbjct: 65 LDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRMEL 124
Query: 130 DETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAM 189
D+T RD IN+ + LD+ WGVK+ R EI+ + PP++I +M Q+TAEREKRA
Sbjct: 125 DKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRAR 184
Query: 190 ILIAEGKK-----------EAAIREAEGQKQAA-----------ILKAEGEKQRQILIAE 227
I +EG+K EA I+++EG+ QAA I +A+GE + L+AE
Sbjct: 185 IAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAE 244
Query: 228 GQAEAIRKVLEALKM---ADEKYLTL--QYIEKLPDLAKYGN-LIVPYDTESLIGLLRVL 281
AEAIR++ AL+ AD L + QY+ +LAK N LI+P + + L+
Sbjct: 245 ANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAG 304
Query: 282 QKV 284
K+
Sbjct: 305 MKI 307
>gb|AAF44771.1|AF235154_1 (AF235154) GNA1220 [Neisseria gonorrhoeae]
>gi|7274434|gb|AAF44772.1|AF235155_1 (AF235155) GNA1220
[Neisseria gonorrhoeae]
>gi|7274436|gb|AAF44773.1|AF235156_1 (AF235156) GNA1220
[Neisseria gonorrhoeae]
Length = 315
Score = 192 bits (483), Expect = 4e-48
Identities = 122/303 (40%), Positives = 178/303 (58%), Gaps = 29/303 (9%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHV 69
IIL + + S VI + +VERLG+F+R L G++ +IPF++RV L+E
Sbjct: 5 IILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSLKEIP 64
Query: 70 IDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMEL 129
+DVP Q I +DN +TVD ++Y+Q+ DP A Y S+++MAI +LAQT LR++IG MEL
Sbjct: 65 LDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRMEL 124
Query: 130 DETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAM 189
D+T RD IN+ + LD+ WGVK+ R EI+ + PP++I AM Q+TAEREKRA
Sbjct: 125 DKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRAMQAQITAEREKRAR 184
Query: 190 ILIAEGKK-----------EAAIREAEGQKQAA-----------ILKAEGEKQRQILIAE 227
I +EG+K EA I+++EG+ QAA I +A+GE + L+AE
Sbjct: 185 IAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAE 244
Query: 228 GQAEAIRKVLEALKM---ADEKYLTL--QYIEKLPDLAKYGN-LIVPYDTESLIGLLRVL 281
AEAIR++ AL+ AD L + QY+ +LAK N LI+P + + L+
Sbjct: 245 ANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAG 304
Query: 282 QKV 284
K+
Sbjct: 305 MKI 307
>pir||H81907 probable periplasmic protein NMA1382 [imported] - Neisseria
meningitidis (group A strain Z2491)
>gi|7228854|gb|AAF42661.1|AF226512_1 (AF226512) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228911|gb|AAF42689.1|AF226541_1 (AF226541) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7380050|emb|CAB84628.1| (AL162755) putative
periplasmic protein [Neisseria meningitidis Z2491]
Length = 315
Score = 192 bits (482), Expect = 5e-48
Identities = 121/303 (39%), Positives = 179/303 (58%), Gaps = 29/303 (9%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHV 69
IIL +++ S VI + +VERLG+F+R L G++ +IPF++RV L+E
Sbjct: 5 IILLAAVVVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSLKEIP 64
Query: 70 IDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMEL 129
+DVP Q I +DN +TVD ++Y+Q+ DP A Y S+++MAI +LAQT LR++IG MEL
Sbjct: 65 LDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRMEL 124
Query: 130 DETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAM 189
D+T RD IN+ + LD+ WGVK+ R EI+ + PP++I +M Q+TAEREKRA
Sbjct: 125 DKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRAR 184
Query: 190 ILIAEGKK-----------EAAIREAEGQKQAA-----------ILKAEGEKQRQILIAE 227
I +EG+K EA I+++EG+ QAA I +A+GE + L+AE
Sbjct: 185 IAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAE 244
Query: 228 GQAEAIRKVLEALKM---ADEKYLTL--QYIEKLPDLAKYGN-LIVPYDTESLIGLLRVL 281
AEAIR++ AL+ AD L + QY+ +LAK N LI+P + + L+
Sbjct: 245 ANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAG 304
Query: 282 QKV 284
K+
Sbjct: 305 MKI 307
>gb|AAF42676.1|AF226528_1 (AF226528) membrane protein GNA1220 [Neisseria meningitidis]
>gi|7228895|gb|AAF42681.1|AF226533_1 (AF226533) membrane
protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 192 bits (482), Expect = 5e-48
Identities = 121/303 (39%), Positives = 179/303 (58%), Gaps = 29/303 (9%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHV 69
IIL + + + S VI + +VERLG+F+R L G++ +IPF++RV L+E
Sbjct: 5 IILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSLKEIP 64
Query: 70 IDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMEL 129
+DVP Q I +DN +TVD ++Y+Q+ DP A Y S+++MAI +LAQT LR++IG MEL
Sbjct: 65 LDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRMEL 124
Query: 130 DETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAM 189
D+T RD IN+ + LD+ WGVK+ R EI+ + PP++I +M Q+TAEREKRA
Sbjct: 125 DKTFEERDEINSIVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRAR 184
Query: 190 ILIAEGKK-----------EAAIREAEGQKQAA-----------ILKAEGEKQRQILIAE 227
I +EG+K EA I+++EG+ QAA I +A+GE + L+AE
Sbjct: 185 IAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAE 244
Query: 228 GQAEAIRKVLEALKM---ADEKYLTL--QYIEKLPDLAKYGN-LIVPYDTESLIGLLRVL 281
AEAIR++ AL+ AD L + QY+ +LAK N LI+P + + L+
Sbjct: 245 ANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAG 304
Query: 282 QKV 284
K+
Sbjct: 305 MKI 307
>sp|O59180|YF11_PYRHO HYPOTHETICAL PROTEIN PH1511 >gi|7447604|pir||C71027 probable
erythrocyte band7 integral membrane protein - Pyrococcus
horikoshii >gi|3257936|dbj|BAA30619.1| (AP000006) 266aa
long hypothetical erythrocyte band7 integral membrane
protein [Pyrococcus horikoshii]
Length = 266
Score = 191 bits (481), Expect = 7e-48
Identities = 94/206 (45%), Positives = 145/206 (69%), Gaps = 2/206 (0%)
Query: 1 MMISAGGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERV 60
MM + I+ +F+LI L ++K+++ Y++ ++ RLG+ PG+ FIIP E+
Sbjct: 1 MMFATNFFVTSIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKA 60
Query: 61 KVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNL 120
+VDLR V+DVP QE I KDNV V V+AVVY++++DPVKAV V +++MA +++QT L
Sbjct: 61 VIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTL 120
Query: 121 RAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQM 180
R++IG+ LDE LS RD +N +L+ +D+ TD WG+K+T VEI+ ++ P +Q+AMA+Q
Sbjct: 121 RSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQA 180
Query: 181 TAEREKRAMILIAEGKKEAA--IREA 204
AERE+RA I +AE +++AA +REA
Sbjct: 181 EAERERRARITLAEAERQAAEKLREA 206
>gb|AAC46209.1| (AF002133) MAV266 [Mycobacterium avium]
Length = 266
Score = 191 bits (481), Expect = 7e-48
Identities = 90/206 (43%), Positives = 144/206 (69%), Gaps = 1/206 (0%)
Query: 5 AGGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKV-V 63
AG V L +L IF ++++ SV +I + ++ERLG+++R + + ++PF++R++ V
Sbjct: 6 AGLVLLAVLVIFAIVVVAKSVALIPLAEAAVIERLGRYSRTVSGSVTLLVPFIDRIRARV 65
Query: 64 DLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAI 123
DLRE V+ PPQ VI +DN+ + +D VVY+Q+ P AVY +S++++ + +L T +R +
Sbjct: 66 DLRERVVSFPPQPVITEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTVRNV 125
Query: 124 IGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAE 183
+G M L++TL+ RD IN +LR LD+ T RWG+++ RVE++ IDPP IQ +M KQM A+
Sbjct: 126 VGGMTLEQTLTSRDQINGQLRGVLDEATGRWGLRVARVELRSIDPPPSIQASMEKQMKAD 185
Query: 184 REKRAMILIAEGKKEAAIREAEGQKQ 209
REKRAMIL AEG +E+AI+E + +
Sbjct: 186 REKRAMILTAEGSRESAIKEPRARSR 211
>gb|AAF42668.1|AF226519_1 (AF226519) membrane protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 191 bits (481), Expect = 7e-48
Identities = 121/303 (39%), Positives = 179/303 (58%), Gaps = 29/303 (9%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHV 69
IIL +++ S VI + +VERLG+F+R L G++ +IPF++RV L+E
Sbjct: 5 IILLAAVVVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSLKEIP 64
Query: 70 IDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMEL 129
+DVP Q I +DN +TVD ++Y+Q+ DP A Y S+++MAI +LAQT LR++IG MEL
Sbjct: 65 LDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRMEL 124
Query: 130 DETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAM 189
D+T RD IN+ + LD+ WGVK+ R EI+ + PP++I +M Q+TAEREKRA
Sbjct: 125 DKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRAR 184
Query: 190 ILIAEGKK-----------EAAIREAEGQKQAA-----------ILKAEGEKQRQILIAE 227
I +EG+K EA I+++EG+ QAA I +A+GE + L+AE
Sbjct: 185 IAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAE 244
Query: 228 GQAEAIRKVLEALKM---ADEKYLTL--QYIEKLPDLAKYGN-LIVPYDTESLIGLLRVL 281
AEAIR++ AL+ AD L + QY+ +LAK N LI+P + + L+
Sbjct: 245 ANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAG 304
Query: 282 QKV 284
K+
Sbjct: 305 MKI 307
>pir||B75107 stomatin-like protein PAB1933 - Pyrococcus abyssi (strain Orsay)
>gi|5458082|emb|CAB49571.1| (AJ248285) STOMATIN-LIKE
PROTEIN [Pyrococcus abyssi]
Length = 268
Score = 191 bits (480), Expect = 9e-48
Identities = 96/199 (48%), Positives = 143/199 (71%), Gaps = 3/199 (1%)
Query: 8 VALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLRE 67
V IIL +F+LI L ++K+++ Y++ ++ RLG+ PG+ FIIP E+ +VDLR
Sbjct: 9 VTTIIL-LFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRT 67
Query: 68 HVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEM 127
V+DVP QE I KDNV V V+AVVY++++DPVKAV V +++MA +++QT LR++IG+
Sbjct: 68 QVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQA 127
Query: 128 ELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKR 187
LDE LS RD +N +L+ +D+ TD WG+K+T VEI+ ++ P +Q AMAKQ AERE+R
Sbjct: 128 HLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERR 187
Query: 188 AMILIAEGKKEAA--IREA 204
A I +AE +++AA +REA
Sbjct: 188 ARITLAEAERQAAEKLREA 206
>gb|AAF42663.1|AF226514_1 (AF226514) membrane protein GNA1220 [Neisseria meningitidis]
>gi|7228862|gb|AAF42665.1|AF226516_1 (AF226516) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228897|gb|AAF42682.1|AF226534_1 (AF226534) membrane
protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 190 bits (479), Expect = 1e-47
Identities = 121/303 (39%), Positives = 178/303 (57%), Gaps = 29/303 (9%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHV 69
IIL + + S VI + +VERLG+F+R L G++ +IPF++RV L+E
Sbjct: 5 IILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSLKEIP 64
Query: 70 IDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMEL 129
+DVP Q I +DN +TVD ++Y+Q+ DP A Y S+++MAI +LAQT LR++IG MEL
Sbjct: 65 LDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRMEL 124
Query: 130 DETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAM 189
D+T RD IN+ + LD+ WGVK+ R EI+ + PP++I +M Q+TAEREKRA
Sbjct: 125 DKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRAR 184
Query: 190 ILIAEGKK-----------EAAIREAEGQKQAA-----------ILKAEGEKQRQILIAE 227
I +EG+K EA I+++EG+ QAA I +A+GE + L+AE
Sbjct: 185 IAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAE 244
Query: 228 GQAEAIRKVLEALKM---ADEKYLTL--QYIEKLPDLAKYGN-LIVPYDTESLIGLLRVL 281
AEAIR++ AL+ AD L + QY+ +LAK N LI+P + + L+
Sbjct: 245 ANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAG 304
Query: 282 QKV 284
K+
Sbjct: 305 MKI 307
>gb|AAF42675.1|AF226527_1 (AF226527) membrane protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 190 bits (478), Expect = 2e-47
Identities = 121/303 (39%), Positives = 178/303 (57%), Gaps = 29/303 (9%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHV 69
IIL + + S VI + +VERLG+F+R L G++ +IPF++RV L+E
Sbjct: 5 IILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSLKEIP 64
Query: 70 IDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMEL 129
+DVP Q I +DN +TVD ++Y+Q+ DP A Y S+++MAI +LAQT LR++IG MEL
Sbjct: 65 LDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRMEL 124
Query: 130 DETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAM 189
D+T RD IN+ + LD+ WGVK+ R EI+ + PP++I +M Q+TAEREKRA
Sbjct: 125 DKTFEERDEINSIVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRAR 184
Query: 190 ILIAEGKK-----------EAAIREAEGQKQAA-----------ILKAEGEKQRQILIAE 227
I +EG+K EA I+++EG+ QAA I +A+GE + L+AE
Sbjct: 185 IAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAE 244
Query: 228 GQAEAIRKVLEALKM---ADEKYLTL--QYIEKLPDLAKYGN-LIVPYDTESLIGLLRVL 281
AEAIR++ AL+ AD L + QY+ +LAK N LI+P + + L+
Sbjct: 245 ANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAG 304
Query: 282 QKV 284
K+
Sbjct: 305 MKI 307
>pir||D72522 probable erythrocyte band 7 integral membrane protein APE2153 -
Aeropyrum pernix (strain K1) >gi|5105852|dbj|BAA81164.1|
(AP000063) 278aa long hypothetical erythrocyte band 7
integral membrane protein [Aeropyrum pernix]
Length = 278
Score = 190 bits (477), Expect = 2e-47
Identities = 115/279 (41%), Positives = 169/279 (60%), Gaps = 38/279 (13%)
Query: 7 GVALIILGIFLLIMLLL---SVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV 63
G ALI +G+ LLI+L+L S+K++R Y++ ++ RLG+ + PG+ IIPF++ + V
Sbjct: 18 GQALIPVGVALLIVLILLSMSIKIVREYERAVIFRLGRLIGVKGPGLFLIIPFVDTLVKV 77
Query: 64 DLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAI 123
DLR +D+P Q I KDNV V VDAVVYY++ DP KAV + ++ A+V LAQT LR +
Sbjct: 78 DLRIVTVDIPEQRTITKDNVTVGVDAVVYYKVFDPEKAVVRIENYHYAVVMLAQTTLRDV 137
Query: 124 IGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAE 183
IG++ELD+ L+ R+ IN KL+E LD++TD WG+K+T V I+ + P+ + AMAKQ AE
Sbjct: 138 IGQVELDDLLTKREEINKKLQEILDQLTDPWGIKVTAVTIKEVKLPESMLRAMAKQAEAE 197
Query: 184 REKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALKMA 243
R +RA I+ EAEG++QAA + AE AE K AL+
Sbjct: 198 RWRRARII-----------EAEGERQAAKIMAEA------------AEFYEKHPAALR-- 232
Query: 244 DEKYLTLQYIEKLPDLAKYGNLIV----PYDTESLIGLL 278
L+ ++ L ++AK NL+V E +IGL+
Sbjct: 233 ------LRELQTLIEVAKEKNLVVVTPLRMGAEDMIGLM 265
>gi|11499015 membrane protein [Archaeoglobus fulgidus]
>gi|6647985|sp|O28852|YE20_ARCFU HYPOTHETICAL PROTEIN
AF1420 >gi|7447605|pir||C69427 membrane protein homolog
- Archaeoglobus fulgidus >gi|2649154|gb|AAB89829.1|
(AE001006) membrane protein [Archaeoglobus fulgidus]
Length = 249
Score = 189 bits (475), Expect = 3e-47
Identities = 101/237 (42%), Positives = 154/237 (64%), Gaps = 5/237 (2%)
Query: 15 IFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLREHVIDVPP 74
I +++ LL +V++++ Y++G++ RLG+ PG+ FIIP +E + VVDLR DVP
Sbjct: 10 IVVVLFLLSAVRIVKEYERGVIFRLGRLVGARGPGLFFIIPILENMVVVDLRTVTYDVPS 69
Query: 75 QEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLS 134
QEV+ KDNV V V+AVVYY+++DP KAV V D+ A +LAQT LR+IIG+ ELDE LS
Sbjct: 70 QEVVTKDNVTVKVNAVVYYRVVDPAKAVTEVFDYQYATAQLAQTTLRSIIGQAELDEVLS 129
Query: 135 GRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAE 194
RD +N KL++ +D+ T+ WG+K+T VEI+ ++ P++++ MA Q AERE+R+ I+ AE
Sbjct: 130 ERDKLNVKLQQIIDEETNPWGIKVTAVEIKDVELPEEMRRIMAMQAEAERERRSKIIRAE 189
Query: 195 GKKEAAIREAE-----GQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALKMADEK 246
G+ +AA++ E Q + AIL + +I + + +E LK EK
Sbjct: 190 GEYQAAMKLREAADVLAQSEGAILLRYLQTLNEISAEQNTTIVMPIPVELLKFFVEK 246
>pir||F70378 erythrocyte band 7 homolog - Aquifex aeolicus
>gi|2983432|gb|AAC07014.1| (AE000713) erythrocyte band 7
homolog [Aquifex aeolicus]
Length = 253
Score = 183 bits (461), Expect = 2e-45
Identities = 91/198 (45%), Positives = 138/198 (68%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLREHVI 70
I + I +L+ L ++KVI Y++ +V RLG+ PG+ +IP ++R+ V LR +
Sbjct: 9 IFIAILVLLFLASAIKVIPEYERAVVFRLGRVIGAKGPGLIIVIPIIDRIVRVSLRTVTL 68
Query: 71 DVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELD 130
DVP Q+VI KDNV V VDAVVY++++DPVKA+ V D+ A ++AQT LR++ GE ELD
Sbjct: 69 DVPTQDVITKDNVTVQVDAVVYFRVVDPVKAIVEVEDYFYATSQIAQTTLRSVCGEAELD 128
Query: 131 ETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMI 190
E LS R+ IN KL+E +D+ TD WGVK+ VE+++ID P+++++A+A+Q AERE+RA I
Sbjct: 129 ELLSQREKINMKLQEIIDRQTDPWGVKVIAVELKKIDLPEELRKALARQAEAERERRAKI 188
Query: 191 LIAEGKKEAAIREAEGQK 208
+ AE + +AA + E +
Sbjct: 189 ISAEAEYQAAQKLLEAAR 206
>pir||T39599 conserved hypothetical protein SPBC16G5.07c - fission yeast
(Schizosaccharomyces pombe) >gi|3133101|emb|CAA19027.1|
(AL023554) conserved hypothetical protein.
[Schizosaccharomyces pombe]
Length = 354
Score = 183 bits (459), Expect = 3e-45
Identities = 110/292 (37%), Positives = 169/292 (57%), Gaps = 30/292 (10%)
Query: 35 LVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
+VER+G+F+R+L PG+ F+ P ++++ + L+E +++P Q I DNV + +D V+Y
Sbjct: 63 VVERMGRFSRILTPGVAFLAPIIDKIAYIHSLKERALEIPTQSAITLDNVSLGLDGVLYI 122
Query: 94 QILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKITDR 153
Q+ DP KA Y V D AI +LAQT +R+ IG + LD L R +N + + ++K +
Sbjct: 123 QVYDPYKASYGVEDADYAISQLAQTTMRSEIGRLTLDHVLRERQSLNIHITDAINKAAES 182
Query: 154 WGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAIL 213
WG++ R EI+ I PP+ + AM +Q++AER+KRA IL +EGK++AAI AEG KQA IL
Sbjct: 183 WGIRCLRHEIRDIRPPESVVMAMHQQVSAERQKRAEILESEGKRQAAINVAEGDKQAEIL 242
Query: 214 KAEGEKQRQILIAEGQAEAIRKVLEALK-----MAD------------EKYLTLQYIEKL 256
+EG+K + I A +A+AIR+ A +AD Y+ QYI
Sbjct: 243 DSEGQKIKTINSALAEAQAIREKASATASGIAVLADSIKKQEHGLEAVSLYIAQQYITNF 302
Query: 257 PDLAKYGN-LIVPYDTESLIGL----LRVLQKV-------KSIPLQQSTEKK 296
LAK N +IVP T + G+ L + ++V KS P + T++K
Sbjct: 303 GKLAKASNSMIVPASTSDVSGMVAQALSIFKQVSKTTAPDKSTPKELHTDEK 354
>pir||B71689 hypothetical protein RP328 - Rickettsia prowazekii
>gi|3860888|emb|CAA14788.1| (AJ235271) unknown
[Rickettsia prowazekii]
Length = 311
Score = 182 bits (458), Expect = 3e-45
Identities = 110/310 (35%), Positives = 176/310 (56%), Gaps = 27/310 (8%)
Query: 9 ALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVD-LRE 67
AL+I I +++++ VKV+ Q +VE+LGKF+++L PG++ +IP ++RV L+E
Sbjct: 4 ALLIFSIITILVIIQMVKVVPQQQAWVVEKLGKFDKVLQPGLNLLIPIIQRVAYKHTLKE 63
Query: 68 HVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEM 127
IDV Q I DNV +++D V+Y +I+DP+ A Y V++ AI +LAQT +R+ IG++
Sbjct: 64 EAIDVTAQTAISNDNVTLSIDGVLYVKIIDPMAASYGVNNPYYAITQLAQTTMRSEIGKL 123
Query: 128 ELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKR 187
LD T RD +N + +++ WG++ R EI+ I PP+ I +AM Q+ AER+KR
Sbjct: 124 PLDRTFEERDTLNVAIVSAINQAAINWGIQCMRYEIKDIQPPQTILKAMELQVAAERQKR 183
Query: 188 AMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKV-------LEAL 240
A IL +EG ++A I AEG+K +L +E Q+ A+G+AEAI V +E +
Sbjct: 184 AQILESEGNRQAKINHAEGEKAQIVLNSEASYTDQVNRAKGEAEAIGLVATATANSIEIV 243
Query: 241 KMADEK---------YLTLQYIEKLPDLAKYGNLIV-----PYDTESLIGLLRVLQKVKS 286
A +K + QYI +LAK N ++ + + G L + ++K+
Sbjct: 244 AAAIQKTGGSDAVALKIAEQYISAFGNLAKDTNTVILPTNLSEPSSFVTGALTIFNQLKT 303
Query: 287 IPLQQSTEKK 296
S EKK
Sbjct: 304 -----SAEKK 308
>gi|7305503 stomatin-like protein 2 [Homo sapiens]
>gi|6456118|gb|AAF09142.1|AF190167_1 (AF190167) membrane
associated protein SLP-2 [Homo sapiens]
>gi|9652259|gb|AAF91466.1|AF282596_1 (AF282596)
stomatin-like protein 2 [Homo sapiens]
Length = 356
Score = 179 bits (449), Expect = 4e-44
Identities = 105/274 (38%), Positives = 164/274 (59%), Gaps = 22/274 (8%)
Query: 24 SVKVIRPYQKG-LVERLGKFNRLLDPGIHFIIPFMERVKVVD-LREHVIDVPPQEVICKD 81
+V + P Q+ +VER+G+F+R+L+PG++ +IP ++R++ V L+E VI+VP Q + D
Sbjct: 36 TVVLFVPQQEAWVVERMGRFHRILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLD 95
Query: 82 NVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINA 141
NV + +D V+Y +I+DP KA Y V D A+ +LAQT +R+ +G++ LD+ R+ +NA
Sbjct: 96 NVTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNA 155
Query: 142 KLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAI 201
+ + +++ D WG++ R EI+ I P ++E+M Q+ AER KRA +L +EG +E+AI
Sbjct: 156 SIVDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRESAI 215
Query: 202 REAEGQKQAAILKAEGEKQRQILIAEGQ-----------AEAIRKVLEALKM-----ADE 245
AEG+KQA IL +E EK QI A G+ AEAIR + AL A
Sbjct: 216 NVAEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIRILAAALTQHNGDAAAS 275
Query: 246 KYLTLQYIEKLPDLAKYGNLIV----PYDTESLI 275
+ QY+ LAK N I+ P D S++
Sbjct: 276 LTVAEQYVSAFSKLAKDSNTILLPSNPGDVTSMV 309
>gi|11429564 stomatin-like protein 2 [Homo sapiens]
Length = 377
Score = 179 bits (449), Expect = 4e-44
Identities = 105/274 (38%), Positives = 164/274 (59%), Gaps = 22/274 (8%)
Query: 24 SVKVIRPYQKG-LVERLGKFNRLLDPGIHFIIPFMERVKVVD-LREHVIDVPPQEVICKD 81
+V + P Q+ +VER+G+F+R+L+PG++ +IP ++R++ V L+E VI+VP Q + D
Sbjct: 57 TVVLFVPQQEAWVVERMGRFHRILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLD 116
Query: 82 NVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINA 141
NV + +D V+Y +I+DP KA Y V D A+ +LAQT +R+ +G++ LD+ R+ +NA
Sbjct: 117 NVTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNA 176
Query: 142 KLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAI 201
+ + +++ D WG++ R EI+ I P ++E+M Q+ AER KRA +L +EG +E+AI
Sbjct: 177 SIVDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRESAI 236
Query: 202 REAEGQKQAAILKAEGEKQRQILIAEGQ-----------AEAIRKVLEALKM-----ADE 245
AEG+KQA IL +E EK QI A G+ AEAIR + AL A
Sbjct: 237 NVAEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIRILAAALTQHNGDAAAS 296
Query: 246 KYLTLQYIEKLPDLAKYGNLIV----PYDTESLI 275
+ QY+ LAK N I+ P D S++
Sbjct: 297 LTVAEQYVSAFSKLAKDSNTILLPSNPGDVTSMV 330
>pir||A83590 probable stomatin-like protein PA0452 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946311|gb|AAG03841.1|AE004482_8 (AE004482) probable
stomatin-like protein [Pseudomonas aeruginosa]
Length = 264
Score = 178 bits (446), Expect = 9e-44
Identities = 85/200 (42%), Positives = 146/200 (72%), Gaps = 2/200 (1%)
Query: 1 MMISAGGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERV 60
MM + G+A+++ +FL ++L +++++R Y++G+V +LG+F ++ PG+ +IP ++++
Sbjct: 1 MMGISYGLAMLL--VFLALLLFSALRILREYERGVVFQLGRFWKVKGPGLVLVIPAIQQM 58
Query: 61 KVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNL 120
+DLR V+DVPPQ+VI +DNV V V+AVVY+++LDP KA+ V ++L A +LAQT L
Sbjct: 59 VRIDLRTIVLDVPPQDVISRDNVSVKVNAVVYFRVLDPQKAIIQVENYLAATSQLAQTTL 118
Query: 121 RAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQM 180
RA++G+ ELDE L+ R+ +N +++ LD TD WG+K+ VEI+ +D + + A+A+Q
Sbjct: 119 RAVLGKHELDEMLAERERLNLDIQQVLDAQTDAWGIKVANVEIKHVDLNESMVRAIARQA 178
Query: 181 TAEREKRAMILIAEGKKEAA 200
AERE+RA ++ AEG+ +A+
Sbjct: 179 EAERERRAKVIHAEGELQAS 198
>gb|AAF29073.1|AF161458_1 (AF161458) HSPC108 [Homo sapiens]
Length = 342
Score = 177 bits (444), Expect = 1e-43
Identities = 104/274 (37%), Positives = 163/274 (58%), Gaps = 22/274 (8%)
Query: 24 SVKVIRPYQKG-LVERLGKFNRLLDPGIHFIIPFMERVKVVD-LREHVIDVPPQEVICKD 81
+V + P Q+ +VER+G+F+R+L+PG++ +IP ++R++ V L+E VI+VP Q + D
Sbjct: 22 TVVLFVPQQEAWVVERMGRFHRILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLD 81
Query: 82 NVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINA 141
NV + +D V+Y +I+DP KA Y V D A+ +LAQT +R+ +G++ LD+ R+ +NA
Sbjct: 82 NVTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNA 141
Query: 142 KLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAI 201
+ + +++ D WG++ R EI+ I P ++E+M Q+ AER KR +L +EG +E+AI
Sbjct: 142 SIVDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRPTVLESEGTRESAI 201
Query: 202 REAEGQKQAAILKAEGEKQRQILIAEGQ-----------AEAIRKVLEALKM-----ADE 245
AEG+KQA IL +E EK QI A G+ AEAIR + AL A
Sbjct: 202 NVAEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIRILAAALTQHNGDAAAS 261
Query: 246 KYLTLQYIEKLPDLAKYGNLIV----PYDTESLI 275
+ QY+ LAK N I+ P D S++
Sbjct: 262 LTVAEQYVSAFSKLAKDSNTILLPSNPGDVTSMV 295
>gb|AAF47110.1| (AE003462) CG2970 gene product [Drosophila melanogaster]
Length = 323
Score = 175 bits (440), Expect = 4e-43
Identities = 99/250 (39%), Positives = 150/250 (59%), Gaps = 17/250 (6%)
Query: 35 LVERLGKFNRLLDPGIHFIIPFMERVKVVD-LREHVIDVPPQEVICKDNVVVTVDAVVYY 93
+VER+G+F+R+LDPG++ ++P +++K V L+E IDVP Q I DNV +++D V+Y
Sbjct: 10 VVERMGRFHRILDPGLNILVPVADKIKYVQSLKEIAIDVPKQSAITSDNVTLSIDGVLYL 69
Query: 94 QILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKITDR 153
+I+DP KA Y V D AI +LAQT +R+ +G+M +D+ R+ +N + + ++K ++
Sbjct: 70 RIIDPYKASYGVEDPEFAITQLAQTTMRSELGKMSMDKVFRERESLNVSIVDSINKASEA 129
Query: 154 WGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAIL 213
WG+ R EI+ I P + EAM Q+ AER KRA IL +EG +EA I AEG++++ IL
Sbjct: 130 WGIACLRYEIRDIRLPTRVHEAMQMQVEAERRKRAAILESEGVREAEINIAEGKRKSRIL 189
Query: 214 KAEGEKQRQILIAEGQAEAIRKVLEA--------------LKMADEKYLTL--QYIEKLP 257
+E E+Q I A G+A AI V +A L + LTL QYI
Sbjct: 190 ASEAERQEHINKASGEAAAIIAVADARARSLLAIAKSLSHLDGQNAASLTLAEQYIGAFK 249
Query: 258 DLAKYGNLIV 267
LAK N ++
Sbjct: 250 KLAKTNNTMI 259
>pir||T21562 hypothetical protein F30A10.5 - Caenorhabditis elegans
>gi|3876548|emb|CAB03018.1| (Z81072) predicted using
Genefinder~Similarity to Human erythrocyte band 7
integral membrane protein (SW:BAN7_HUMAN), contains
similarity to Pfam domain: PF01145 (SPFH domain / Band 7
family), Score=170.0, E-value=1.3e-47, N=1~cDNA EST
yk543b6.3 comes >
Length = 334
Score = 173 bits (434), Expect = 2e-42
Identities = 97/253 (38%), Positives = 156/253 (61%), Gaps = 20/253 (7%)
Query: 35 LVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
+VER+GKF ++L+PG++F++P ++++K V +LRE I++P Q I DNV + +D V+Y
Sbjct: 55 VVERMGKFYKILEPGLNFLLPIIDKIKFVQNLREIAIEIPEQGAITIDNVQLRLDGVLYL 114
Query: 94 QILDPVKAV---YNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKI 150
++ DP KA Y V D A+ +LAQT +R+ +G++ LD R+++N + ++K
Sbjct: 115 RVFDPYKACDASYGVDDPEFAVTQLAQTTMRSEVGKINLDTVFKERELLNENIVFAINKA 174
Query: 151 TDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQA 210
+ WG++ R EI+ + P IQEAM Q+ AER+KRA IL +EG +EAAI AEG K++
Sbjct: 175 SAPWGIQCMRYEIRDMQMPSKIQEAMQMQVEAERKKRAAILESEGIREAAINRAEGDKKS 234
Query: 211 AILKAEGEKQRQILIAEGQAEAI-------RKVLEALKMADEK---------YLTLQYIE 254
AIL +E + +I +A+G+AEA+ K +E + +A EK + QY+
Sbjct: 235 AILASEAVQAERINVAKGEAEAVILKAESRAKAIERIALALEKDGGANAAGLTVAEQYVG 294
Query: 255 KLPDLAKYGNLIV 267
+LAK N +V
Sbjct: 295 AFGNLAKESNTVV 307
>gb|AAF68388.1|AF236372_1 (AF236372) stomatin-like protein [Zea mays]
Length = 394
Score = 171 bits (429), Expect = 9e-42
Identities = 104/268 (38%), Positives = 158/268 (58%), Gaps = 20/268 (7%)
Query: 25 VKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHVIDVPPQEVICKDNV 83
V ++ + +VER GK+ + L G H +IP ++R+ V L+E I +P Q I KDNV
Sbjct: 58 VSIVPEKKAYVVERFGKYLKTLGSGFHLLIPAVDRIAYVHSLKEETIPIPHQNAITKDNV 117
Query: 84 VVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKL 143
+ +D+V+Y +I+DP A Y V + + A+++LAQT +R+ +G++ LD+T RD +N K+
Sbjct: 118 TIQIDSVIYVKIMDPYLASYGVENPIYAVLQLAQTTMRSELGKITLDKTFEERDALNEKI 177
Query: 144 REELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIRE 203
+++ WG+K R EI+ I+PP I++AM Q AER+KRA IL +EG K+A I E
Sbjct: 178 VSAINEAATDWGLKCIRYEIRDINPPAGIRQAMEMQAEAERKKRAQILESEGMKQAQILE 237
Query: 204 AEGQKQAAILKAEGEKQRQILIAEGQAEAI-----------RKVLEAL------KMADEK 246
+EG+K A IL++EG A+G AEAI R V +A+ K A K
Sbjct: 238 SEGKKTAQILESEGAMLDLANRAKGAAEAILAKSEATARGMRLVSDAMTTEGSAKAASLK 297
Query: 247 YLTLQYIEKLPDLA-KYGNLIVPYDTES 273
L QYIE +LA K +++P D+ S
Sbjct: 298 -LAEQYIEAFSNLAQKTNTMLLPGDSAS 324
>pir||T02246 hypothetical protein P1.11659_4 - human >gi|2984585|gb|AAC07983.1|
(AC004472) P1.11659_4 [Homo sapiens]
Length = 357
Score = 169 bits (424), Expect = 3e-41
Identities = 105/288 (36%), Positives = 164/288 (56%), Gaps = 36/288 (12%)
Query: 24 SVKVIRPYQKG-LVERLGKFNRLLDPGIHFIIPFMERVKVVD-LREHVIDVPPQEVICKD 81
+V + P Q+ +VER+G+F+R+L+PG++ +IP ++R++ V L+E VI+VP Q + D
Sbjct: 23 TVVLFVPQQEAWVVERMGRFHRILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLD 82
Query: 82 NVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINA 141
NV + +D V+Y +I+DP KA Y V D A+ +LAQT +R+ +G++ LD+ R+ +NA
Sbjct: 83 NVTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNA 142
Query: 142 KLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQ--------------MTAEREKR 187
+ + +++ D WG++ R EI+ I P ++E+M Q + AER KR
Sbjct: 143 SIVDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVGAKEGWEKGLRAPVEAERRKR 202
Query: 188 AMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQ-----------AEAIRKV 236
A +L +EG +E+AI AEG+KQA IL +E EK QI A G+ AEAIR +
Sbjct: 203 ATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIRIL 262
Query: 237 LEALKM-----ADEKYLTLQYIEKLPDLAKYGNLIV----PYDTESLI 275
AL A + QY+ LAK N I+ P D S++
Sbjct: 263 AAALTQHNGDAAASLTVAEQYVSAFSKLAKDSNTILLPSNPGDVTSMV 310
>pir||T18493 hypothetical protein C0800w - malaria parasite (Plasmodium
falciparum) >gi|3758847|emb|CAB11132.1| (Z98551) band
7-related protein [Plasmodium falciparum]
Length = 374
Score = 168 bits (420), Expect = 1e-40
Identities = 95/251 (37%), Positives = 149/251 (58%), Gaps = 7/251 (2%)
Query: 35 LVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
+VERLGK+N+ L GIHF+IPF++++ V L+E I +P Q I KDNV + +D V+Y
Sbjct: 89 IVERLGKYNKTLLAGIHFLIPFIDKIAYVFSLKEETITIPNQTAITKDNVTLNIDGVLYI 148
Query: 94 QILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKITDR 153
+ +P + Y + D + A+ +LAQ +R+ +G++ LD T RD +N KL + +++
Sbjct: 149 KCDNPYNSSYAIEDAVFAVTQLAQVTMRSELGKLTLDATFLERDNLNEKLVKAINESAKN 208
Query: 154 WGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAIL 213
WG+K R EI+ I P +I+ AM KQ AER KRA IL +EG++E+ I A G+K+ +IL
Sbjct: 209 WGIKCMRYEIRDIILPVNIKNAMEKQAEAERRKRAEILQSEGERESEINIAIGKKRKSIL 268
Query: 214 KAEGEKQRQILIAEGQAEAIRKVLEALKMADEK-----YLTLQYIEKLPDLAKYGN-LIV 267
AEG+ A+ AEAI + +K D + QYI+ ++ K N +I+
Sbjct: 269 IAEGQSFAIKAKADATAEAIEIISNKIKKLDSNNAISLLVAEQYIDVFSNICKNNNTVII 328
Query: 268 PYDTESLIGLL 278
P D ++ L+
Sbjct: 329 PADLNNISSLI 339
>pir||T05863 hypothetical protein T29A15.70 - Arabidopsis thaliana
>gi|4469009|emb|CAB38270.1| (AL035602) putative protein
[Arabidopsis thaliana] >gi|7269612|emb|CAB81408.1|
(AL161571) putative protein [Arabidopsis thaliana]
Length = 515
Score = 168 bits (420), Expect = 1e-40
Identities = 85/210 (40%), Positives = 135/210 (63%), Gaps = 1/210 (0%)
Query: 25 VKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHVIDVPPQEVICKDNV 83
++++ + ++ER GK+ L GIHF+IPF++R+ V L+E I +P Q I KDNV
Sbjct: 63 IRIVPERKAFVIERFGKYATTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPNQTAITKDNV 122
Query: 84 VVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKL 143
+ +D V+Y +I+DP A Y V + A+V+LAQT +R+ +G++ LD+T RD +N K+
Sbjct: 123 SIHIDGVLYVKIVDPKLASYGVESPIYAVVQLAQTTMRSELGKITLDKTFEERDTLNEKI 182
Query: 144 REELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIRE 203
E ++ WG++ R EI+ I PP ++ AM Q AER+KRA IL +EG++++ I
Sbjct: 183 VEAINVAAKDWGLQCLRYEIRDIMPPHGVRAAMEMQAEAERKKRAQILESEGERQSHINI 242
Query: 204 AEGQKQAAILKAEGEKQRQILIAEGQAEAI 233
A+G+K + IL +E K Q+ A+G+AEAI
Sbjct: 243 ADGKKSSVILASEAAKMDQVNRAQGEAEAI 272
>dbj|BAA97132.1| (AB018115) contains similarity to stomatin like
protein~gene_id:MJP23.8 [Arabidopsis thaliana]
Length = 401
Score = 167 bits (419), Expect = 1e-40
Identities = 96/267 (35%), Positives = 161/267 (59%), Gaps = 18/267 (6%)
Query: 25 VKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV-DLREHVIDVPPQEVICKDNV 83
++++ + ++ER GKF+ L GIHF++PF++R+ V L+E I + Q I KDNV
Sbjct: 106 IRIVPERKACVIERFGKFHTTLPAGIHFLVPFVDRIAYVHSLKEEAIPIGNQTAITKDNV 165
Query: 84 VVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKL 143
+ +D V+Y +I+DP A Y V + + A+++LAQT +R+ +G++ LD+T RD +N K+
Sbjct: 166 SIHIDGVLYVKIVDPKLASYGVENPIYAVMQLAQTTMRSELGKITLDKTFEERDTLNEKI 225
Query: 144 REELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIRE 203
E ++ WG++ R EI+ I PP ++ AM Q AER+KRA IL +EG+++A I
Sbjct: 226 VEAINVAAKDWGLQCLRYEIRDIMPPNGVRVAMEMQAEAERKKRAQILESEGERQAHINR 285
Query: 204 AEGQKQAAILKAEGEKQRQILIAEGQAEAI-----------RKVLEALKMA-DEKYLTL- 250
A+G+K + IL++E Q+ A+G+AEAI V ++LK A E+ +L
Sbjct: 286 ADGKKSSVILESEAAMMDQVNRAQGEAEAILARAQATAKGLAMVSQSLKEAGGEEAASLR 345
Query: 251 ---QYIEKLPDLAKYG-NLIVPYDTES 273
QYI+ +AK G +++P + ++
Sbjct: 346 VAEQYIQAFGKIAKEGTTMLLPSNVDN 372
>pir||G69104 stomatin-like protein - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622911|gb|AAB86246.1| (AE000933)
stomatin-like protein [Methanobacterium
thermoautotrophicum]
Length = 297
Score = 161 bits (403), Expect = 1e-38
Identities = 87/247 (35%), Positives = 149/247 (60%), Gaps = 13/247 (5%)
Query: 12 ILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLREHVID 71
+L +++++ LS+K+++ Y++G+V RLGK + +PG+ IIP ++R+ V LR +
Sbjct: 51 LLAAVIIVIISLSLKIVKQYERGVVFRLGKVIGVREPGLRIIIPIIDRMVRVSLRIVTMP 110
Query: 72 VPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDE 131
+P Q++I +DNV + V AV Y+++ DP++AV + D+ A+ +++QT +R +IG+ LDE
Sbjct: 111 IPSQKIITQDNVSIDVAAVAYFKVADPLRAVVAIEDYYGAVNQISQTTVRNVIGQFVLDE 170
Query: 132 TLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMIL 191
LS IN K++E +D+ ++ WG+ +T VEI+ I P+ +Q AMA+Q AER+KRA I+
Sbjct: 171 VLSETARINEKIKEIIDEHSEPWGINVTTVEIKDIKLPEGMQRAMARQAEAERDKRAKII 230
Query: 192 IAEGKKEAAIREAEG----QKQAAILKAEG---------EKQRQILIAEGQAEAIRKVLE 238
AEG+ +A + E +K L+ EK I+ +IR V E
Sbjct: 231 TAEGEYFSAAKLGEAADVIEKHPVALQLRNLQVLAEIATEKNSTIVFPAQFMSSIRDVKE 290
Query: 239 ALKMADE 245
++ DE
Sbjct: 291 FIEREDE 297
>gb|AAC64873.1| (AF034831) stomatin like protein [Rhizobium etli]
Length = 222
Score = 159 bits (399), Expect = 3e-38
Identities = 89/228 (39%), Positives = 144/228 (63%), Gaps = 18/228 (7%)
Query: 39 LGKFNRLLDPGIHFIIPFMERVKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDP 98
LG+F + PG+ +IP+++++ VDLR V+DVP Q+VI DNV V V AV+Y++++DP
Sbjct: 8 LGRFTGVKGPGLILLIPYVQQMIRVDLRTRVLDVPSQDVISHDNVSVRVSAVIYFRVIDP 67
Query: 99 VKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKI 158
K+ V DF+MA +LAQT LR+++G+ +LDE L+ RD +N+ ++E LD TD WG+K+
Sbjct: 68 EKSTIQVEDFMMATSQLAQTTLRSVLGKHDLDEMLAERDRLNSDIQEILDAQTDAWGIKV 127
Query: 159 TRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGE 218
VEI+ +D + + A+A+Q AERE+RA ++ AEG+++AA A +L+A
Sbjct: 128 ATVEIKHVDINESMIRAIARQAEAERERRAKVINAEGEQQAA---------AKLLEA--- 175
Query: 219 KQRQILIAEGQAEAIRKVLEALKMADEKYLTLQYIEKLPDLAKYGNLI 266
+IL + +A +R + +A EK T+ + P + GNL+
Sbjct: 176 --AEILAKQPEAMQLRYLSTLNVIASEKTSTILF----PFPMELGNLM 217
>emb|CAC12423.1| (AL445067) membrane protein 7, erythrocyte (human) related protein
[Thermoplasma acidophilum]
Length = 274
Score = 155 bits (387), Expect = 7e-37
Identities = 79/202 (39%), Positives = 124/202 (61%)
Query: 8 VALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLRE 67
+ LII+ I LI+LL + V++ +++ +V LG++ + PGI FI P + R V R
Sbjct: 6 ILLIIIIIIALIILLSGIHVLKEWERAIVLTLGRYGGIRGPGIIFITPIVSRGIYVSTRI 65
Query: 68 HVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEM 127
+ + KDNV V VDA++YYQ++DP KAV N+ ++ + AQT LR +IG+
Sbjct: 66 QPVQFKTEATFTKDNVPVNVDAIMYYQVIDPQKAVLNIENYSVGTNYAAQTTLREVIGKS 125
Query: 128 ELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKR 187
DE LS R+ I RE +D+ T+ WGVK+ VEI+ + P +QEAM++Q +AERE+R
Sbjct: 126 MFDELLSEREKIGETAREIIDQKTEAWGVKVASVEIRDVLVPSQLQEAMSRQASAERERR 185
Query: 188 AMILIAEGKKEAAIREAEGQKQ 209
+ + +A+ + EAA + E +Q
Sbjct: 186 SRVTLAQAEVEAAQKMVEASRQ 207
>gb|AAF48927.1| (AE003511) CG7633 gene product [Drosophila melanogaster]
Length = 339
Score = 153 bits (384), Expect = 2e-36
Identities = 85/206 (41%), Positives = 127/206 (61%), Gaps = 4/206 (1%)
Query: 3 ISAGGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNR--LLDPGIHFIIPFMERV 60
I A V+++I+ + I + + KV+ Y++ ++ R+G+ PG+ F++P ++
Sbjct: 6 ILATVVSVLIMVLTFPISVFICFKVVSEYERAVIFRMGRLRSGGARGPGVFFVLPCVDDY 65
Query: 61 KVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNL 120
VDLR DVPPQEV+ KD+V VTVDAVVYY+I DP+KAV V ++ + LA T L
Sbjct: 66 YPVDLRTVSFDVPPQEVLSKDSVTVTVDAVVYYRISDPLKAVIQVYNYSHSTSLLAATTL 125
Query: 121 RAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQM 180
R ++G L E L+ R+ I+ ++ LD+ TD WGVK+ RVEI+ + P +Q AMA +
Sbjct: 126 RNVLGTRNLSELLTERETISHTMQMSLDEATDPWGVKVERVEIKDVSLPTALQRAMAAEA 185
Query: 181 TAEREKRAMILIAEG--KKEAAIREA 204
A RE RA ++ AEG K A+REA
Sbjct: 186 EAAREARAKVIAAEGEMKSSRALREA 211
>gb|AAF48928.1| (AE003511) CG7635 gene product [Drosophila melanogaster]
Length = 350
Score = 150 bits (375), Expect = 2e-35
Identities = 97/269 (36%), Positives = 151/269 (56%), Gaps = 22/269 (8%)
Query: 8 VALIILGIFLL---IMLLLSVKVIRPYQKGLVERLGKFNR-LLDPGIHFIIPFMERVKVV 63
V L + IF++ I + + KV+ Y++ ++ RLG+ + PG+ FI+P ++ + V
Sbjct: 69 VTLFSVLIFIITSPIAIFICFKVVAEYERAIIFRLGRLSGGARGPGMFFILPCIDEYRKV 128
Query: 64 DLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAI 123
DLR +VP QE++ KD+V VTVDAVVYY+I DP+ AV V D+ M+ LA T LR I
Sbjct: 129 DLRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLRNI 188
Query: 124 IGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAE 183
+G L E L+ R+ + ++ LD+ T+ WGV + RVEI+ + P +Q AMA + A
Sbjct: 189 VGTRNLSELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRAMAAEAEAA 248
Query: 184 REKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALKMA 243
R+ RA ++ AEG+K K A LK + ++ A A +R + ++
Sbjct: 249 RDARAKVIAAEGEK----------KSATALKEASD----VISASPSALQLRYLQTLSSIS 294
Query: 244 DEKYLTLQY---IEKL-PDLAKYGNLIVP 268
EK T+ + +E L P LAKY +L+ P
Sbjct: 295 AEKNSTIIFPLPMELLTPYLAKYAHLMGP 323
>sp|Q27433|MEC2_CAEEL MECHANOSENSORY PROTEIN 2 >gi|2133486|pir||S60260 stomatin-like
protein - Caenorhabditis elegans
>gi|973210|gb|AAA87551.1| (U26735) MEC-2 [Caenorhabditis
elegans] >gi|973212|gb|AAA87552.1| (U26736) MEC-2
[Caenorhabditis elegans] >gi|1086680|gb|AAA82333.1|
(U41021) C. elegans mec-2 (GB:U26735) [Caenorhabditis
elegans] >gi|1585780|prf||2201490A stomatin-like protein
[Caenorhabditis elegans]
Length = 481
Score = 148 bits (370), Expect = 7e-35
Identities = 86/224 (38%), Positives = 133/224 (58%), Gaps = 11/224 (4%)
Query: 7 GVALIILGIFLLIMLL-----LSVKVIRPYQKGLVERLGKF--NRLLDPGIHFIIPFMER 59
G L IL L+ L + +KV++ Y++ ++ RLG+ PGI FI+P ++
Sbjct: 118 GWILTILSYLLIFFTLPISACMCIKVVQEYERAVIFRLGRLMPGGAKGPGIFFIVPCIDT 177
Query: 60 VKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTN 119
+ VDLR +VPPQE++ KD+V V VDAVVY++I + +V NV D + LAQT
Sbjct: 178 YRKVDLRVLSFEVPPQEILSKDSVTVAVDAVVYFRISNATISVTNVEDAARSTKLLAQTT 237
Query: 120 LRAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQ 179
LR I+G L E LS R+ I+ +++ LD+ T+ WGVK+ RVE++ + P +Q AMA +
Sbjct: 238 LRNILGTKTLAEMLSDREAISHQMQTTLDEATEPWGVKVERVEVKDVRLPVQLQRAMAAE 297
Query: 180 MTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQI 223
A RE RA +++AEG+++A + K+AA + AE Q+
Sbjct: 298 AEAAREARAKVIVAEGEQKA----SRALKEAAEVIAESPSALQL 337
>emb|CAA73876.1| (Y13473) stomatin [Danio rerio]
Length = 284
Score = 147 bits (367), Expect = 2e-34
Identities = 83/224 (37%), Positives = 130/224 (57%), Gaps = 11/224 (4%)
Query: 7 GVALIILGIFLLIMLL-----LSVKVIRPYQKGLVERLGKFNR--LLDPGIHFIIPFMER 59
G L+I I L ++ L + +K+++ Y++ ++ RLG+ R PG+ FI+P +
Sbjct: 33 GWILVIFSILLTLLTLPLSIWMCIKIVKEYERAIIFRLGRILRGGAKGPGLFFILPCTDS 92
Query: 60 VKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTN 119
VD+R D+PPQEV+ KD+V V+VD VVYY++ + AV N+++ A LAQT
Sbjct: 93 FINVDMRTITFDIPPQEVLTKDSVTVSVDGVVYYRVQNATLAVANITNADAATRLLAQTT 152
Query: 120 LRAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQ 179
LR ++G L E LS R+ I ++ LD TD WG+K+ RVEI+ + P +Q AMA +
Sbjct: 153 LRNVLGTKNLAEILSDREEIAHSMQSTLDDATDDWGIKVERVEIKDVKLPLQLQRAMAAE 212
Query: 180 MTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQI 223
A RE RA ++ AEG+ A + K+A+++ AE Q+
Sbjct: 213 AEASREARAKVIAAEGEMNA----SRALKEASLVIAESPSALQL 252
>emb|CAB76415.1| (Z66565) contains similarity to Pfam domain: PF01145 (SPFH domain /
Band 7 family), Score=369.9, E-value=8.6e-108, N=1~cDNA
EST yk67b6.5 comes from this gene~cDNA EST yk82a9.5
comes from this gene~cDNA EST yk392b12.3 comes from this
gene~cDNA EST yk440> >gi|7321105|emb|CAB82215.1|
(AL032659) contains similarity to Pfam domain: PF01145
(SPFH domain / Band 7 family), Score=369.9,
E-value=8.6e-108, N=1~cDNA EST yk67b6.5 comes from this
gene~cDNA EST yk82a9.5 comes from this gene~cDNA EST
yk392b12.3 comes from this gene~cDNA EST yk4>
Length = 281
Score = 146 bits (364), Expect = 4e-34
Identities = 84/201 (41%), Positives = 122/201 (59%), Gaps = 6/201 (2%)
Query: 6 GGVALIILGIFLLIMLLLS----VKVIRPYQKGLVERLGKFNR--LLDPGIHFIIPFMER 59
G + II + +L L LS +KV++ Y++ ++ RLG+ PGI FIIP +E
Sbjct: 27 GWIITIISYLVVLFTLPLSAFFCLKVVQEYERAVIFRLGRLKHGGARGPGIFFIIPCIES 86
Query: 60 VKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTN 119
K +DLR DVPPQE++ KD+V V+VDAV+Y++I + +V NV D + LAQT
Sbjct: 87 FKKIDLRVVSFDVPPQEILSKDSVTVSVDAVIYFRISNATVSVINVEDAARSTKLLAQTT 146
Query: 120 LRAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQ 179
LR +G L E LS RD I+ +++ LD+ TD WGVK+ RVEI+ + P +Q AMA +
Sbjct: 147 LRNFLGTRTLAEMLSSRDAISMQMQAALDEATDPWGVKVERVEIKDVRLPIQLQRAMAAE 206
Query: 180 MTAEREKRAMILIAEGKKEAA 200
A R A I+ AEG++ A+
Sbjct: 207 AEAARAAGAKIIAAEGEQLAS 227
>pir||T34691 hypothetical protein SC1B5.13c SC1B5.13c - Streptomyces coelicolor
>gi|3130017|emb|CAA18987.1| (AL023517) hypothetical
protein SC1B5.13c [Streptomyces coelicolor A3(2)]
Length = 262
Score = 145 bits (361), Expect = 8e-34
Identities = 88/273 (32%), Positives = 153/273 (55%), Gaps = 34/273 (12%)
Query: 24 SVKVIRPYQKGLVERLGKF-NRLLDPGIHFIIPFMERVKVVDLREHVIDVPPQEVICKDN 82
+ +V++ Y++G+V RLG+ + PG I+PF++R+ V+++ + VP QE I +DN
Sbjct: 23 AARVVKQYERGVVFRLGRLAGQARGPGFTMIVPFVDRLHKVNMQIITLPVPAQEGITRDN 82
Query: 83 VVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAK 142
V V VDAVVY++++D A+ V D+ A+ ++AQT+LR+IIG+ +LD+ LS R+ +N
Sbjct: 83 VTVRVDAVVYFKVVDAANALVRVEDYRFAVSQMAQTSLRSIIGKSDLDDLLSDREKLNQG 142
Query: 143 LREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIR 202
L +D WGV+I RVEI+ + P ++ +MA+Q A+RE+RA ++ A+ + +A+
Sbjct: 143 LELMIDSPAVGWGVQIDRVEIKDVSLPDTMKRSMARQAEADRERRARVINADAELQASKV 202
Query: 203 EAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALKMADEKYLTLQYIEKLPDLAKY 262
AE ++ + A A +R + + +A EK T
Sbjct: 203 LAEAAREMSETPA--------------ALQLRLLQTVVAVAAEKNST------------- 235
Query: 263 GNLIVPYDTESLIGLLRVLQKVKSIPLQQSTEK 295
L++P+ E LLR L+K + P++ E+
Sbjct: 236 --LVLPFPVE----LLRFLEKAQEHPVEHRVER 262
>sp|Q19200|STO1_CAEEL STO-1 PROTEIN >gi|7447613|pir||T15971 hypothetical protein F08C6.4
- Caenorhabditis elegans >gi|868187|gb|AAA68723.1|
(U29378) similar to erythrocyte band 7 integral membrane
protein (SP:BAN7_HUMAN, P27105) [Caenorhabditis elegans]
Length = 281
Score = 141 bits (353), Expect = 7e-33
Identities = 84/213 (39%), Positives = 127/213 (59%), Gaps = 6/213 (2%)
Query: 16 FLLIMLLLSVKV---IRPYQKGLVERLGKF-NRLLDPGIHFIIPFMERVKVVDLREHVID 71
++LI L V V I+ YQ+ +V RLG+ + PGI FIIP ++ +DLR +
Sbjct: 3 YVLIFLTFPVSVFMCIKEYQRAVVFRLGRLVPDVKGPGIFFIIPCIDTFLNIDLRVASYN 62
Query: 72 VPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDE 131
VP QE++ +D+V V+VDAVVY+++ DP+ +V V + + LAQT LR I+G L E
Sbjct: 63 VPSQEILSRDSVTVSVDAVVYFKVFDPITSVVGVGNATDSTKLLAQTTLRTILGTHTLSE 122
Query: 132 TLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMIL 191
LS R+ I+A ++ LD+ T+ WG+K+ RVE++ + P +Q AMA + A R+ A I+
Sbjct: 123 ILSDREKISADMKISLDEATEPWGIKVERVELRDVRLPSQMQRAMAAEAEATRDAGAKII 182
Query: 192 IAEGKKEAAIREAEGQKQAAILKAEGEKQRQIL 224
AEG+ A+ AE I K+EG Q + L
Sbjct: 183 AAEGELRASAALAEA--ATIISKSEGAMQLRYL 213
>sp|Q22165|STO4_CAEEL STO-4 PROTEIN
Length = 213
Score = 141 bits (352), Expect = 9e-33
Identities = 76/177 (42%), Positives = 111/177 (61%), Gaps = 2/177 (1%)
Query: 26 KVIRPYQKGLVERLGKFNR--LLDPGIHFIIPFMERVKVVDLREHVIDVPPQEVICKDNV 83
+V++ Y++ ++ RLG+ PGI FIIP +E K +DLR DVPPQE++ KD+V
Sbjct: 8 QVVQEYERAVIFRLGRLKHGGARGPGIFFIIPCIESFKKIDLRVVSFDVPPQEILSKDSV 67
Query: 84 VVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKL 143
V+VDAV+Y++I + +V NV D + LAQT LR +G L E LS RD I+ ++
Sbjct: 68 TVSVDAVIYFRISNATVSVINVEDAARSTKLLAQTTLRNFLGTRTLAEMLSSRDAISMQM 127
Query: 144 REELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAA 200
+ LD+ TD WGVK+ RVEI+ + P +Q AMA + A R A I+ AEG++ A+
Sbjct: 128 QAALDEATDPWGVKVERVEIKDVRLPIQLQRAMAAEAEAARAAGAKIIAAEGEQLAS 184
>gb|AAF14646.1|AF163772_6 (AF163772) 7138.6 [Leishmania major]
Length = 357
Score = 141 bits (352), Expect = 9e-33
Identities = 86/251 (34%), Positives = 137/251 (54%), Gaps = 18/251 (7%)
Query: 35 LVERLGKFNRLLDPGIHFIIPFMERVKV-VDLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
+VERLG+++R LD G ++PF+++++ +++E I++P Q I DNV+V +D V++
Sbjct: 72 VVERLGRYHRTLDSGWWVVVPFIDKIRYNYNVKEQGIEIPNQSAITSDNVMVEIDGVLFL 131
Query: 94 QILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKITDR 153
+I+D KA YN+ + + ++ LAQT +R+ IG M LD R +N E L + +
Sbjct: 132 KIVDSCKASYNIENPVFNLINLAQTTMRSEIGRMSLDSLFRERASLNQSTVEVLRREANE 191
Query: 154 WGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAIL 213
WG++ R EI+ I + ++ +M Q AER+KR +IL +EG+ A I A G K A
Sbjct: 192 WGIECKRYEIRDIVVSELVRRSMDLQAEAERKKRKLILESEGESTATINRANGMKIAQQC 251
Query: 214 KAEGEKQRQILIAEGQAEAIR--------------KVLEALKMADEKY---LTLQYIEKL 256
A+ EK +EG A AIR +E K ++E + YIEK
Sbjct: 252 VADAEKYTAERQSEGAAAAIRVKAAAVSDNISIVSDAIEKAKHSNEAISLRVAESYIEKF 311
Query: 257 PDLAKYGNLIV 267
+LAK N +V
Sbjct: 312 GELAKESNTVV 322
>gb|AAF54744.1| (AE003694) CG17424 gene product [Drosophila melanogaster]
Length = 474
Score = 141 bits (351), Expect = 1e-32
Identities = 69/197 (35%), Positives = 124/197 (62%), Gaps = 4/197 (2%)
Query: 8 VALIILGIFLLIMLLLSV----KVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV 63
VA+ + I +LI+L S+ + + + ++ RLG+ L PG+ F++P ++ V
Sbjct: 31 VAVFVSWILVLILLPFSLCCCLTIAYEFHRLVIFRLGRIRSCLGPGLVFLLPCIDSFNTV 90
Query: 64 DLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAI 123
D+R V++V PQE++ KD+V +TV+AVV+Y I DP+ ++ V D A +++Q LR I
Sbjct: 91 DIRTDVVNVDPQEMLTKDSVSITVNAVVFYCIYDPINSIIKVDDARDATERISQVTLRNI 150
Query: 124 IGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAE 183
+G L E L+ R ++ ++++ + KIT+RWGV++ RV++ I P ++ ++A + A
Sbjct: 151 VGSKGLHELLASRQQLSLEIQQAVAKITERWGVRVERVDLMEISLPSSLERSLASEAEAT 210
Query: 184 REKRAMILIAEGKKEAA 200
RE RA I++AEG+ +A+
Sbjct: 211 REARAKIILAEGEAKAS 227
>sp|Q21190|UNC1_CAEEL UNC-1 PROTEIN >gi|7494583|pir||T34324 erythrocyte band 7 intergral
membrane protein homolog unc-1 - Caenorhabditis elegans
>gi|1280125|gb|AAC69044.1| (U55375) Erythrocyte band 7
intergral membrane protein [Caenorhabditis elegans]
Length = 282
Score = 140 bits (350), Expect = 2e-32
Identities = 84/213 (39%), Positives = 129/213 (60%), Gaps = 9/213 (4%)
Query: 7 GVALIILGIFLLIM-----LLLSVKVIRPYQKGLVERLGK--FNRLLDPGIHFIIPFMER 59
G AL L L+I+ + + +KVI+ Y++ ++ R+G+ F PG+ FIIP ++
Sbjct: 29 GYALQALSWILIIVTFPFSMCVCLKVIKEYERVVIFRIGRLVFGGARGPGMIFIIPCIDT 88
Query: 60 VKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTN 119
+ +DLR VPPQE++ KD+V V+VDAVVY++ DP+ +V NV D + + LAQT
Sbjct: 89 YRKIDLRVVSYAVPPQEILSKDSVTVSVDAVVYFRTSDPIASVNNVDDAIYSTKLLAQTT 148
Query: 120 LRAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQ 179
LR +G L E L+ R+ I LD+ T+ WGVK+ RVE++ I P+ + AMA +
Sbjct: 149 LRNALGMKTLTEMLTEREAIAQLCETILDEGTEHWGVKVERVEVKDIRLPQQLTRAMAAE 208
Query: 180 MTAEREKRAMILIAEGKKEA--AIREAEGQKQA 210
A RE RA ++ AEG+++A A++EA QA
Sbjct: 209 AEAAREARAKVVAAEGEQKASRALKEAADVIQA 241
>pir||T27365 hypothetical protein Y71H9A.2 - Caenorhabditis elegans
>gi|3881292|emb|CAA21750.1| (AL032659) predicted using
Genefinder~contains similarity to Pfam domain: PF01145
(SPFH domain / Band 7 family), Score=350.2,
E-value=7.4e-102, N=1 [Caenorhabditis elegans]
Length = 298
Score = 140 bits (350), Expect = 2e-32
Identities = 77/197 (39%), Positives = 119/197 (60%), Gaps = 2/197 (1%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNR--LLDPGIHFIIPFMERVKVVDLREH 68
I+ + L I + L VKV + Y++ ++ RLG+ PG+ F++P ++ K +DLR
Sbjct: 41 ILAVLTLPISVFLCVKVAQEYERAVIFRLGRVKPGGARGPGLFFVVPCIDSYKKIDLRTL 100
Query: 69 VIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEME 128
+VPPQE++ KD V V VDAVV+++I + +V N+ D + LAQT LR I+G
Sbjct: 101 SFEVPPQELLSKDAVTVAVDAVVFFRISNATISVINIEDAARSTKLLAQTTLRNILGTKT 160
Query: 129 LDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRA 188
L E LS RD+I+ +++ LD+ T WGVK+ RVE++ + P +Q MA + A R+ A
Sbjct: 161 LTEMLSDRDVISLQMQATLDETTIPWGVKVERVEMKDVRLPYQLQRVMAAEAEATRDAMA 220
Query: 189 MILIAEGKKEAAIREAE 205
I+ AEG+K A+ AE
Sbjct: 221 KIIAAEGEKNASTALAE 237
>gi|4758276 erythrocyte membrane protein band 7.2 (stomatin) [Homo sapiens]
>gi|11427638|ref|XP_005343.1| erythrocyte membrane
protein band 7.2 (stomatin) [Homo sapiens]
>gi|114823|sp|P27105|BAN7_HUMAN ERYTHROCYTE BAND 7
INTEGRAL MEMBRANE PROTEIN (STOMATIN) (PROTEIN 7.2B)
>gi|88143|pir||S17659 membrane protein 7, erythrocyte -
human >gi|31069|emb|CAA42671.1| (X60067) erythrocyte
band 7 integral membrane protein [Homo sapiens]
>gi|1161562|emb|CAA59436.1| (X85116) stomatin [Homo
sapiens] >gi|1586566|prf||2204264A band 7 integral
membrane protein [Homo sapiens]
Length = 288
Score = 140 bits (349), Expect = 2e-32
Identities = 73/190 (38%), Positives = 117/190 (61%), Gaps = 4/190 (2%)
Query: 19 IMLLLSVKVIRPYQKGLVERLGKFNR--LLDPGIHFIIPFMERVKVVDLREHVIDVPPQE 76
I + + +K+I+ Y++ ++ RLG+ + PG+ FI+P + VD+R D+PPQE
Sbjct: 48 ISIWMCIKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQE 107
Query: 77 VICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGR 136
++ KD+V ++VD VVYY++ + AV N+++ A LAQT LR ++G L + LS R
Sbjct: 108 ILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLGTKNLSQILSDR 167
Query: 137 DIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGK 196
+ I ++ LD TD WG+K+ RVEI+ + P +Q AMA + A RE RA ++ AEG+
Sbjct: 168 EEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAEAEASREARAKVIAAEGE 227
Query: 197 KEA--AIREA 204
A A++EA
Sbjct: 228 MNASRALKEA 237
>gb|AAA58432.1| (M81635) stomatin peptide [Homo sapiens]
Length = 288
Score = 140 bits (349), Expect = 2e-32
Identities = 73/190 (38%), Positives = 117/190 (61%), Gaps = 4/190 (2%)
Query: 19 IMLLLSVKVIRPYQKGLVERLGKFNR--LLDPGIHFIIPFMERVKVVDLREHVIDVPPQE 76
I + + +K+I+ Y++ ++ RLG+ + PG+ FI+P + VD+R D+PPQE
Sbjct: 48 ISIWMCIKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQE 107
Query: 77 VICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGR 136
++ KD+V ++VD VVYY++ + AV N+++ A LAQT LR ++G L + LS R
Sbjct: 108 ILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLGTKNLSQILSDR 167
Query: 137 DIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGK 196
+ I ++ LD TD WG+K+ RVEI+ + P +Q AMA + A RE RA ++ AEG+
Sbjct: 168 EEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAEAEASREARAKVIAAEGE 227
Query: 197 KEA--AIREA 204
A A++EA
Sbjct: 228 MNASRALKEA 237
>gb|AAC50296.1| (U33931) band 7.2b stomatin [Homo sapiens]
>gi|1585683|prf||2201444A membrane protein band 7.2b
[Homo sapiens]
Length = 296
Score = 140 bits (349), Expect = 2e-32
Identities = 73/190 (38%), Positives = 117/190 (61%), Gaps = 4/190 (2%)
Query: 19 IMLLLSVKVIRPYQKGLVERLGKFNR--LLDPGIHFIIPFMERVKVVDLREHVIDVPPQE 76
I + + +K+I+ Y++ ++ RLG+ + PG+ FI+P + VD+R D+PPQE
Sbjct: 56 ISIWMCIKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQE 115
Query: 77 VICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGR 136
++ KD+V ++VD VVYY++ + AV N+++ A LAQT LR ++G L + LS R
Sbjct: 116 ILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLGTKNLSQILSDR 175
Query: 137 DIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGK 196
+ I ++ LD TD WG+K+ RVEI+ + P +Q AMA + A RE RA ++ AEG+
Sbjct: 176 EEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAEAEASREARAKVIAAEGE 235
Query: 197 KEA--AIREA 204
A A++EA
Sbjct: 236 MNASRALKEA 245
>sp|P54116|BAN7_MOUSE ERYTHROCYTE BAND 7 INTEGRAL MEMBRANE PROTEIN (STOMATIN) (PROTEIN
7.2B)
Length = 284
Score = 139 bits (346), Expect = 5e-32
Identities = 78/209 (37%), Positives = 125/209 (59%), Gaps = 8/209 (3%)
Query: 4 SAGGVALIILGIFLLIMLLLSV----KVIRPYQKGLVERLGKFNR--LLDPGIHFIIPFM 57
+ G + + + IF+LI +S+ K+++ Y++ ++ RLG+ + PG+ FI+P
Sbjct: 29 ACGWILVAVSFIFVLITFPISIWICIKIVKEYERVIIFRLGRILQGGAKGPGLFFILPCT 88
Query: 58 ERVKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQ 117
+ VD+R D+PPQEV+ KD+V ++VD VVYY++ + AV N+++ A LAQ
Sbjct: 89 DSFIKVDMRTISFDIPPQEVLTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQ 148
Query: 118 TNLRAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMA 177
T LR +G L + LS R+ I ++ LD TD WG+K+ RVEI+ + P +Q AMA
Sbjct: 149 TTLRNALGTKNLSQILSDREEIAHHMQSTLDDATDDWGIKVERVEIKDVKLPVQLQRAMA 208
Query: 178 KQMTAEREKRAMILIAEGKKEA--AIREA 204
+ A RE RA ++ AEG+ A A++EA
Sbjct: 209 AEAEAAREARAKVIAAEGEMNASRALKEA 237
>pir||JC5221 stomatin - mouse >gi|975689|emb|CAA62503.1| (X91043) erthyrocyte
band 7 integral membrane protein, protein 7.2B, stomatin
[Mus musculus]
Length = 284
Score = 139 bits (346), Expect = 5e-32
Identities = 78/209 (37%), Positives = 125/209 (59%), Gaps = 8/209 (3%)
Query: 4 SAGGVALIILGIFLLIMLLLSV----KVIRPYQKGLVERLGKFNR--LLDPGIHFIIPFM 57
+ G + + + IF+LI +S+ K+++ Y++ ++ RLG+ + PG+ FI+P
Sbjct: 29 ACGWILVAVSFIFVLITFPISIWICIKIVKEYERVIIFRLGRILQGGAKGPGLFFILPCT 88
Query: 58 ERVKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQ 117
+ VD+R D+PPQEV+ KD+V ++VD VVYY++ + AV N+++ A LAQ
Sbjct: 89 DSFIKVDMRTISFDIPPQEVLTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQ 148
Query: 118 TNLRAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMA 177
T LR +G L + LS R+ I ++ LD TD WG+K+ RVEI+ + P +Q AMA
Sbjct: 149 TTLRNALGTKNLSQILSDREEIAHHMQSTLDDATDDWGIKVERVEIKDVKLPVQLQRAMA 208
Query: 178 KQMTAEREKRAMILIAEGKKEA--AIREA 204
+ A RE RA ++ AEG+ A A++EA
Sbjct: 209 AEAEAAREARAKVIAAEGEMNASRALKEA 237
>sp|Q19958|STO2_CAEEL STO-2 PROTEIN >gi|7500297|pir||T16240 hypothetical protein F32A6.5
- Caenorhabditis elegans >gi|1065452|gb|AAA81390.1|
(U40409) similar C. elegans stomatin-like protein MEC-2,
Genbank accession # U26735, and to erythrocyte band 7
integral membrane protein SP:BAN7_HUMAN [Caenorhabditis
elegans]
Length = 280
Score = 139 bits (346), Expect = 5e-32
Identities = 76/202 (37%), Positives = 124/202 (60%), Gaps = 4/202 (1%)
Query: 7 GVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKF--NRLLDPGIHFIIPFMERVKVVD 64
G++ I++ + + +KV++ Y++ ++ RLG+ PGI F++P +E VD
Sbjct: 41 GLSWIMVISTFPVSIYFCMKVVQEYERAVIFRLGRLIGGGAKGPGIFFVLPCIESYTKVD 100
Query: 65 LREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAII 124
LR VPPQE++ KD+V +VDAV+YY+I + +V NV + + LAQT LR ++
Sbjct: 101 LRTVSFSVPPQEILTKDSVTTSVDAVIYYRISNATVSVANVENAHHSTRLLAQTTLRNML 160
Query: 125 GEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAER 184
G L E LS R+ + A ++ LD+ T+ WG+K+ RVEI+ + P +Q AMA + A R
Sbjct: 161 GTRSLSEILSDRETLAASMQTILDEATESWGIKVERVEIKDVRLPIQLQRAMAAEAEATR 220
Query: 185 EKRAMILIAEGKKEA--AIREA 204
E RA ++ AEG+++A A+R+A
Sbjct: 221 EARAKVIAAEGEQKASRALRDA 242
>gi|7710018 erythrocyte protein band 7.2; protein 7.2b [Mus musculus]
>gi|972907|gb|AAA75024.1| (U17297) integral membrane
phosphoprotein band 7.2b [Mus musculus]
>gi|1582614|prf||2119189A band 7.2b protein [Mus
musculus]
Length = 284
Score = 138 bits (344), Expect = 8e-32
Identities = 77/211 (36%), Positives = 125/211 (58%), Gaps = 9/211 (4%)
Query: 3 ISAGGVALIILGIFLLIM-----LLLSVKVIRPYQKGLVERLGKFNR--LLDPGIHFIIP 55
+ A G L+ F +I+ + + +K+++ Y++ ++ RLG+ + PG+ FI+P
Sbjct: 27 LGACGWILVAASFFFVIITFPISIWICIKIVKEYERVIIFRLGRILQGGAKGPGLFFILP 86
Query: 56 FMERVKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKL 115
+ + VD+R D+PPQEV+ KD+V ++VD VVYY++ + AV N+++ A L
Sbjct: 87 CTDSLIKVDMRTISFDIPPQEVLTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLL 146
Query: 116 AQTNLRAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEA 175
AQT LR +G L + LS R+ I ++ LD TD WG+K+ RVEI+ + P +Q A
Sbjct: 147 AQTTLRNALGTKNLSQILSDREEIAHHMQSTLDDATDDWGIKVERVEIKDVKLPVQLQRA 206
Query: 176 MAKQMTAEREKRAMILIAEGKKEA--AIREA 204
MA + A RE RA ++ AEG+ A A++EA
Sbjct: 207 MAAEAEAAREARAKVIAAEGEMNASRALKEA 237
>gb|AAC64173.1| (AF093620) stomatin [Mus musculus]
Length = 284
Score = 138 bits (344), Expect = 8e-32
Identities = 77/211 (36%), Positives = 125/211 (58%), Gaps = 9/211 (4%)
Query: 3 ISAGGVALIILGIFLLIM-----LLLSVKVIRPYQKGLVERLGKFNR--LLDPGIHFIIP 55
+ A G L+ F +I+ + + +K+++ Y++ ++ RLG+ + PG+ FI+P
Sbjct: 27 LGACGWILVAASFFFVIITFPISIWICIKIVKEYERVIIFRLGRILQGGAKGPGLFFILP 86
Query: 56 FMERVKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKL 115
+ + VD+R D+PPQEV+ KD+V ++VD VVYY++ + AV N+++ A L
Sbjct: 87 CTDSLIKVDMRTISFDIPPQEVLTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLL 146
Query: 116 AQTNLRAIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEA 175
AQT LR +G L + LS R+ I ++ LD TD WG+K+ RVEI+ + P +Q A
Sbjct: 147 AQTTLRNALGTKNLSQILSDREEIAHHMQSTLDDATDDWGIKVERVEIKDVKLPVQLQRA 206
Query: 176 MAKQMTAEREKRAMILIAEGKKEA--AIREA 204
MA + A RE RA ++ AEG+ A A++EA
Sbjct: 207 MAAEAEAAREARAKVIAAEGEMNASRALKEA 237
>sp|Q20657|STO3_CAEEL STO-3 PROTEIN >gi|7503947|pir||T22502 hypothetical protein F52D10.5
- Caenorhabditis elegans >gi|3877420|emb|CAA91476.1|
(Z66564) contains similarity to Pfam domain: PF01145
(SPFH domain / Band 7 family), Score=393.1,
E-value=8.8e-115, N=1 [Caenorhabditis elegans]
Length = 267
Score = 130 bits (323), Expect = 2e-29
Identities = 73/200 (36%), Positives = 123/200 (61%), Gaps = 6/200 (3%)
Query: 8 VALIILGIFLLIMLLLS----VKVIRPYQKGLVERLGKF--NRLLDPGIHFIIPFMERVK 61
VALI FLL+ +S VK+++ Y + ++ RLG+ + PGI ++PF++ K
Sbjct: 18 VALICAWAFLLLTFPVSIFFCVKIVKEYDRMVIFRLGRLWQDNPRGPGIVLVLPFIDSHK 77
Query: 62 VVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLR 121
VDLR DVP QE++ +D+V + VDA VYY+ DP+ ++ V+D M+ +LAQ++LR
Sbjct: 78 TVDLRVMSYDVPTQEMLTRDSVTIGVDAAVYYRTSDPIASLARVNDAHMSTRQLAQSSLR 137
Query: 122 AIIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMT 181
++G L E ++ R I +++ LD T WG+ + RVEI+ I P+++ AMA +
Sbjct: 138 NVLGTRSLAELMTDRHGIAVQVKYILDSATLFWGIHVERVEIKDIRLPREMCRAMAAEAE 197
Query: 182 AEREKRAMILIAEGKKEAAI 201
A+RE A ++ A+G+ +A++
Sbjct: 198 AQRESDAKVVTAQGELDASM 217
>gb|AAF54746.1| (AE003694) CG14736 gene product [Drosophila melanogaster]
Length = 368
Score = 122 bits (304), Expect = 4e-27
Identities = 64/173 (36%), Positives = 109/173 (62%), Gaps = 3/173 (1%)
Query: 35 LVERLGKFNR-LLDPGIHFIIPFMERVKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
++ RLG+ + L PG+ FI+P ++ VD+R V +V PQ+V+ KD+V +TV+AVVYY
Sbjct: 2 IILRLGRLRKGLRGPGLVFILPCIDETHRVDMRTDVTNVRPQDVLTKDSVTITVNAVVYY 61
Query: 94 QILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKITDR 153
I P+ ++ V D A ++Q LR I+G L+ L+ R ++ ++++ + IT R
Sbjct: 62 CIYSPIDSIIQVDDAKQATQLISQVTLRNIVGSKTLNVLLTSRQQLSREIQQAVAGITYR 121
Query: 154 WGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEA--AIREA 204
WGV++ RV++ I P ++ ++A + A RE RA I++AEG+ +A A++EA
Sbjct: 122 WGVRVERVDVMDITLPTSLERSLASEAEAVREARAKIILAEGELKASKALKEA 174
>gb|AAF52157.1| (AE003607) CG14644 gene product [Drosophila melanogaster]
Length = 225
Score = 113 bits (279), Expect = 3e-24
Identities = 60/178 (33%), Positives = 106/178 (58%), Gaps = 4/178 (2%)
Query: 31 YQKGLVERLGKFNRL--LDPGIHFIIPFMERVKVVDLREHVIDVPPQEVICKDNVVVTVD 88
Y++ ++ RLG+ PG+ F++P ++ + VVD+R D+ QE++ +D V +++D
Sbjct: 4 YERAVILRLGRLRPKPPRGPGVIFLVPCIDDLAVVDIRTRSFDLHRQEILTRDMVTISID 63
Query: 89 AVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELD 148
VVYY I P A+ V D A KLA T LR + G +L + LS ++ ++ ++ L
Sbjct: 64 GVVYYSIKSPFDAMLQVYDPEEATEKLAMTTLRNVAGTHKLMDLLSSKEYLSNQIEGILY 123
Query: 149 KITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEA--AIREA 204
T+ WG+++ RVEI+ I P ++ A+A + A RE +A + A+G+++A A++EA
Sbjct: 124 NSTEPWGIRVERVEIKEIFMPDQLKRALAVEQEAMREAKAKVAAAQGERDAVTALKEA 181
>gi|7657615 podocin [Homo sapiens] >gi|7363002|emb|CAB83216.1| (AJ279254)
podocin [Homo sapiens] >gi|7363472|emb|CAB83272.1|
(AJ279246) podocin [Homo sapiens]
Length = 383
Score = 106 bits (261), Expect = 4e-22
Identities = 54/198 (27%), Positives = 109/198 (54%), Gaps = 7/198 (3%)
Query: 10 LIILGIFLLIM-----LLLSVKVIRPYQKGLVERLGKF--NRLLDPGIHFIIPFMERVKV 62
L+++ + +IM + VKV++ Y++ ++ RLG R PG+ F +P ++
Sbjct: 105 LVLISLLFIIMTFPFSIWFCVKVVQEYERVIIFRLGHLLPGRAKGPGLFFFLPCLDTYHK 164
Query: 63 VDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRA 122
VDLR +++P E++ KD ++ +DA+ YY++ + + +++ A+ L QT ++
Sbjct: 165 VDLRLQTLEIPFHEIVTKDMFIMEIDAICYYRMENASLLLSSLAHVSKAVQFLVQTTMKR 224
Query: 123 IIGEMELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTA 182
++ L E L R I + LD +T WG+K+ R+EI+ + P +Q ++A + A
Sbjct: 225 LLAHRSLTEILLERKSIAQDAKVALDSVTCIWGIKVERIEIKDVRLPAGLQHSLAVEAEA 284
Query: 183 EREKRAMILIAEGKKEAA 200
+R+ + ++ AE +K A+
Sbjct: 285 QRQAKVRMIAAEAEKAAS 302
>pir||E82334 hflK protein VC0349 [imported] - Vibrio cholerae (group O1 strain
N16961) >gi|9654765|gb|AAF93522.1| (AE004123) hflK
protein [Vibrio cholerae]
Length = 395
Score = 102 bits (251), Expect = 6e-21
Identities = 78/281 (27%), Positives = 141/281 (49%), Gaps = 9/281 (3%)
Query: 5 AGGVAL---IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVK 61
+GG A+ +I I + + I ++G+V RLGK++R++DPG+++ F++ V
Sbjct: 64 SGGGAIGFGVIAAIAVAVWFFTGFYTIGEAERGVVLRLGKYDRIVDPGLNWRPRFIDEVT 123
Query: 62 VVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLR 121
V+++ ++ KD VVTV V Y+I DP K +Y V++ ++ + + LR
Sbjct: 124 PVNVQAIRSLRASGLMLTKDENVVTVSMDVQYRIADPYKYLYRVTNADDSLRQATDSALR 183
Query: 122 AIIGEMELDETL-SGRDIINAKLREELDKITDRW--GVKITRVEIQRIDPPKDIQEAMAK 178
A++G+ +D L SGR I ++ L+++ D + G+ I V Q PP+ +++A
Sbjct: 184 AVVGDSLMDSILTSGRQQIRQSTQQTLNQVIDSYDMGLMIVDVNFQSARPPEQVKDAFDD 243
Query: 179 QMTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLE 238
+ A ++ I AE K + +A G+ + +A+G +R I A GQ K+L
Sbjct: 244 AIAAREDEERFIREAEAYKNEILPKATGRAERLKKEAQGYNERTINEALGQVAQFEKLLP 303
Query: 239 ALKMADEKYLTLQYIEKLPDLAKYGNLI-VPYDTESLIGLL 278
+ A + Y++ + + Y N V D+ES LL
Sbjct: 304 EYQAAPKVTRDRLYLDAMEQV--YSNTSKVLIDSESSGNLL 342
>sp|P40605|HFLK_VIBPA HFLK PROTEIN >gi|507734|gb|AAA62186.1| (U09005) HflK [Vibrio
parahaemolyticus]
Length = 400
Score = 101 bits (249), Expect = 1e-20
Identities = 84/302 (27%), Positives = 150/302 (48%), Gaps = 10/302 (3%)
Query: 3 ISAGGVAL---IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMER 59
I GG A+ +I I + + + I ++G+V RLGK++R++DPG+++ F++
Sbjct: 65 IGGGGGAIGFGVIAIIAIAVWIFAGFYTIGEAERGVVLRLGKYDRIVDPGLNWRPRFIDE 124
Query: 60 VKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTN 119
+ V+++ ++ KD VVTV V Y++ DP K +Y V++ ++ + +
Sbjct: 125 YEAVNVQAIRSLRASGLMLTKDENVVTVAMDVQYRVADPYKYLYRVTNADDSLRQATDSA 184
Query: 120 LRAIIGEMELDETL-SGRDIINAKLREELDKITDRW--GVKITRVEIQRIDPPKDIQEAM 176
LRA+IG+ +D L SGR I +E L++I D + G+ I V Q PP+ +++A
Sbjct: 185 LRAVIGDSLMDSILTSGRQQIRQSTQETLNQIIDSYDMGLVIVDVNFQSARPPEQVKDAF 244
Query: 177 AKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKV 236
+ A ++ I AE K + +A G+ + +A+G +R A GQ K+
Sbjct: 245 DDAIAAREDEERFIREAEAYKNEILPKATGRAERLKKEAQGYNERVTNEALGQVAQFEKL 304
Query: 237 LEALKMADEKYLTLQYIEKLPDLAKYGNLI-VPYDTESLIGLLRV-LQKVKSIPLQQSTE 294
L + A YI+ + ++ Y N V D+ES LL + + K+ Q T+
Sbjct: 305 LPEYQAAPGVTRDRLYIDAMEEV--YTNTSKVLIDSESSGNLLYLPIDKLAGQEGQTDTK 362
Query: 295 KK 296
+K
Sbjct: 363 RK 364
>gb|AAB18857.1| (U50999) stomatin [Mus musculus]
Length = 259
Score = 100 bits (247), Expect = 2e-20
Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 15/185 (8%)
Query: 24 SVKVIRPYQKGLVERLGKFNR--LLDPGIHFIIPFMERVKVVDLREHVIDVPPQEVICKD 81
S +++ Y++ ++ RLG+ + PG+ F+ R R V+ KD
Sbjct: 39 SFSIVKEYERVIIFRLGRILQGGAKGPGVCFLSC---RALTASSR--------WTVLTKD 87
Query: 82 NVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINA 141
+V ++VD VVYY++ + AV N+++ A LAQT LR +G L + LS R+ I
Sbjct: 88 SVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNALGTKNLSQILSDREEIAH 147
Query: 142 KLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEA-- 199
++ LD TD WG+K+ RVEI+ + P +Q AMA + A RE RA ++ AEG+ A
Sbjct: 148 HMQSTLDDATDDWGIKVERVEIKDVKLPVQLQRAMAAEAEAAREARAKVIAAEGEMNASR 207
Query: 200 AIREA 204
A++EA
Sbjct: 208 ALKEA 212
>pir||B72207 ftsH proteinase activity modulator HflC - Thermotoga maritima
(strain MSB8) >gi|4982405|gb|AAD36886.1|AE001819_9
(AE001819) ftsH protease activity modulator HflC
[Thermotoga maritima]
Length = 283
Score = 100 bits (247), Expect = 2e-20
Identities = 75/271 (27%), Positives = 139/271 (50%), Gaps = 8/271 (2%)
Query: 10 LIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRL-LDPGIHFIIPFMERVKVVDLREH 68
LIIL + I+L S V+ Q+ +V R GK + +PG+HF PF++ V D R
Sbjct: 9 LIILIVVGAILLFSSFYVLDQTQQAVVLRFGKIVAVETEPGLHFKQPFVDNVVRFDKRIL 68
Query: 69 VIDVPPQEVICKDNVVVTVDAVVYYQILDP---VKAVYNVSDFLMAIVKLAQTNLRAIIG 125
+ D+ P+++I D + +D V ++I D +K++ +V L I + +++R I
Sbjct: 69 LYDIEPEKIIAADKKTLVIDTYVLWRIKDAEAFIKSLKSVKLALPRIDDVVYSHVRNIFA 128
Query: 126 EMELDETLSGR--DIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAE 183
+ DE +S + D++ + + D +G+++ V ++ D P + ++A+ ++M AE
Sbjct: 129 KANFDEIISEKREDLLREVTALSREDLKD-FGIEVVDVRVKHADLPAENEKAVYERMKAE 187
Query: 184 REKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALKMA 243
R A + AEG+KEA AE K A +L AE + + + + G+A A++ E
Sbjct: 188 RYSIAAQIRAEGEKEARKIRAEADKTAKVLIAEAQSKAEQIKGTGEASAVKIYAEVFSKD 247
Query: 244 DEKYLTLQYIEKLPDLAKYGNLIVPYDTESL 274
+ Y + +E + K G LI+ + ++L
Sbjct: 248 KDFYEFWRTMEVYRSIEK-GILIIGDELDAL 277
>pir||A82806 integral membrane proteinase XF0452 [imported] - Xylella fastidiosa
(strain 9a5c) >gi|9105296|gb|AAF83262.1|AE003895_13
(AE003895) integral membrane protease [Xylella
fastidiosa]
Length = 379
Score = 99.1 bits (243), Expect = 6e-20
Identities = 72/280 (25%), Positives = 137/280 (48%), Gaps = 10/280 (3%)
Query: 2 MISAGGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPF----M 57
+ AG + +++G+ LLI++ S+++I Q+G+V R G+F R+L PG+ +P+ +
Sbjct: 43 LFDAGILIWVLIGV-LLIVVFSSIQLIGEQQRGVVLRFGQFVRVLQPGLSLKLPWPVESV 101
Query: 58 ERVKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQ 117
+V +++ VP V+ +D +V V V YQI DP +Y + +V+ AQ
Sbjct: 102 YKVNATEIKTFGKQVP---VLTRDENIVNVTLNVQYQINDPHLYLYGSRNANEVLVQAAQ 158
Query: 118 TNLRAIIGEMELDETLSGRDIINAKLREELDKITD--RWGVKITRVEIQRIDPPKDIQEA 175
+ +R +G +L+ L+ R ++ +E L D R G+ +T + + PP++++ A
Sbjct: 159 SAVREQVGRSDLNSVLNNRGPLSTASKERLQASLDAYRTGLLVTGLTLPDARPPEEVKSA 218
Query: 176 MAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRK 235
+ A++ + +I A+ + EA G+ + AEG KQ I A+G A+
Sbjct: 219 FDEVNGAQQVRERLIDEAQAYAAKVVPEARGRAASNRTAAEGYKQAVIARAQGDADRFTL 278
Query: 236 VLEALKMADEKYLTLQYIEKLPDLAKYGNLIVPYDTESLI 275
+ K A E ++E + + ++ D LI
Sbjct: 279 LQAQYKNAPEVTRKRLWLETIQQVLAQNRKVIGADGRQLI 318
>sp|P25662|HFLK_ECOLI HFLK PROTEIN >gi|280067|pir||B43653 probable integral membrane
proteinase (EC 3.4.-.-) hflK - Escherichia coli
>gi|436157|gb|AAC43399.1| (U00005) putative integral
membrane protein required for high frequency
lysogenization by bacteriophage lambda [Escherichia
coli] >gi|537015|gb|AAA97070.1| (U14003) CG Site No.
639; alternate gene name hflA; putative integral
membrane protease required for high frequency
lysogenization by bacteriophage lambda [Escherichia
coli] >gi|1790616|gb|AAC77131.1| (AE000489) protease
specific for phage lambda cII repressor [Escherichia
coli K12]
Length = 419
Score = 97.1 bits (238), Expect = 2e-19
Identities = 70/255 (27%), Positives = 128/255 (49%), Gaps = 5/255 (1%)
Query: 6 GGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDL 65
G V I ++I I+ ++G+V R GKF+ L++PG+++ F++ VK V++
Sbjct: 78 GRVVTIAAAAIVIIWAASGFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNV 137
Query: 66 REHVIDVPPQEV-ICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAII 124
E V ++ V + D VV V+ V Y++ +P K +Y+V+ ++ + + LR +I
Sbjct: 138 -EAVRELAASGVMLTSDENVVRVEMNVQYRVTNPEKYLYSVTSPDDSLRQATDSALRGVI 196
Query: 125 GEMELDETLS-GRDIINAKLREELDKITDRWGVKITRVEI--QRIDPPKDIQEAMAKQMT 181
G+ +D L+ GR +I + + EL++ + + IT +++ Q PP++++ A +
Sbjct: 197 GKYTMDRILTEGRTVIRSDTQRELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDDAIA 256
Query: 182 AEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALK 241
A ++ I AE A GQ Q + +A K + IL A+G+ K+L K
Sbjct: 257 ARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTILEAQGEVARFAKLLPEYK 316
Query: 242 MADEKYLTLQYIEKL 256
A E YIE +
Sbjct: 317 AAPEITRERLYIETM 331
>pir||B83028 proteinase subunit HflK PA4942 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9951222|gb|AAG08327.1|AE004907_5
(AE004907) protease subunit HflK [Pseudomonas
aeruginosa]
Length = 400
Score = 97.1 bits (238), Expect = 2e-19
Identities = 65/259 (25%), Positives = 130/259 (50%), Gaps = 5/259 (1%)
Query: 6 GGVALIILGIFLLIMLLL--SVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVV 63
GG+ L +G+ +L +L L ++ V+ ++ ++ R GK+ + PG++F P +++
Sbjct: 71 GGLGLFGIGLAILAVLWLYNAIYVVDEQEQAVILRFGKYYETVGPGLNFYFPPIDKRFQE 130
Query: 64 DLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAI 123
++ +++ +D +V V V Y+I + V NV +++ + ++ LR +
Sbjct: 131 NVTRERAYSKQGQMLTEDENIVEVPLTVQYKISNLQDFVLNVDQPEVSLQQATESALRHV 190
Query: 124 IGEMELDETLS-GRDIINAKLREELDKITD--RWGVKITRVEIQRIDPPKDIQEAMAKQM 180
G +D L+ GR+ + ++RE L + D R G+ +T+V IQ P+++QEA +
Sbjct: 191 AGSTTMDRILTEGREQMATEVRERLQRFLDTYRTGITVTQVNIQSAQAPREVQEAFDDVI 250
Query: 181 TAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEAL 240
A +++ AE + EA GQ Q I +A G + I A+G+A+ K+L
Sbjct: 251 RAREDEQREKNQAEAYANGVVPEARGQAQRIIEEANGYRDEVISRAQGEADRFSKLLVEY 310
Query: 241 KMADEKYLTLQYIEKLPDL 259
+ A E Y++ + ++
Sbjct: 311 RKAPEVTRERLYLDTMQEV 329
>pir||A72207 ftsH proteinase activity modulator HflK - Thermotoga maritima
(strain MSB8) >gi|4982404|gb|AAD36885.1|AE001819_8
(AE001819) ftsH protease activity modulator HflK
[Thermotoga maritima]
Length = 308
Score = 96.7 bits (237), Expect = 3e-19
Identities = 82/305 (26%), Positives = 143/305 (46%), Gaps = 31/305 (10%)
Query: 8 VALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMER----VKVV 63
V I+LGI+ L V + P + L++ G+F ++ GIH+ +P+ + V V
Sbjct: 8 VVFIVLGIYFLT----GVYQVGPSEVALLKTFGRFTSVVPSGIHYHLPYPIQSHVTVDVT 63
Query: 64 DLREHVI-------------DVPPQE--VICKDNVVVTVDAVVYYQILDPVKAVYNVSDF 108
+R+ I PQE +I DN +V+V+AVV Y++ DPV +N+++
Sbjct: 64 TVRKIEIGFRSIQRGERISYQSVPQEAIMITGDNNLVSVEAVVQYRVKDPVAYAFNITEA 123
Query: 109 LMAIVKLAQTNLRAIIGEMELDETL-SGRDIINAKLREELDKITDRW--GVKITRVEIQR 165
+ ++ LR + +D+ L SGRD I K + L +I D + G+K+ V +Q
Sbjct: 124 DSIVRFTTESVLREKVAMRSIDDVLTSGRDEIGFKTAQMLQEILDSYNCGIKVENVYLQE 183
Query: 166 IDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILI 225
+ PP + +A A ++K +I A + +A+GQ Q + +AE Q L
Sbjct: 184 VVPPDPVVDAFDDVNNARQDKERLINEARKYANDVVPKAQGQAQEILRQAEAYAQEVYLK 243
Query: 226 AEGQAEAIRKVLEALKMADE---KYLTLQYIEKLPDLAKYGNLIVPYDTESLIGLLRVLQ 282
A G+A+ +VLE A + K + L ++ L L K N + + +L +
Sbjct: 244 ALGEAKRFEEVLEEYSKAPDITRKRMLLDALQSL--LEKSENKVFFVGNGDSLNILNISD 301
Query: 283 KVKSI 287
+K +
Sbjct: 302 LLKGM 306
>dbj|BAB06873.1| (AP001517) protease specific for phage lambda cII repressor
[Bacillus halodurans]
Length = 310
Score = 95.2 bits (233), Expect = 8e-19
Identities = 73/289 (25%), Positives = 144/289 (49%), Gaps = 24/289 (8%)
Query: 3 ISAGGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRL-LDPGIHFIIPFMERVK 61
+ G VA++++GI +I L ++ ++ + +V + G+ R+ +PG+ F IPF++ V
Sbjct: 22 VQLGSVAVLLIGIVGII--LSNLFIVEQGEYKVVRQFGEVVRVESEPGLKFKIPFIQSVS 79
Query: 62 VVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQ---T 118
+ + + D+PP E+ +D + D ++I DP++ + NV A L + +
Sbjct: 80 TLPKYQMIYDIPPAEINTRDKKRMMADHYALWRIEDPLRMISNVGSLQGAEAILGEQIFS 139
Query: 119 NLRAIIGEMELDETL----SGRDIINAKLREELDKITDR--WGVKITRVEIQRIDPPKDI 172
+RA +G++E E + + R N +++E ++ +R G+ + V ++R D PK+
Sbjct: 140 AIRAELGQLEFGEIINEEENSRGDFNQQVKERVNSSLERQDLGIVLLDVRMKRTDLPKEN 199
Query: 173 QEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEA 232
+EA+ ++M +ERE A +++G EA A ++ + A+ + + +I G+AEA
Sbjct: 200 EEAVYRRMISERESIAQDYLSQGDAEANRIRARTDQEVTEILAKAKADAEEIIGAGEAEA 259
Query: 233 IRKVLEALKMADE---KYLTLQYIEK---------LPDLAKYGNLIVPY 269
E+ E Y TL EK LP + Y +++ Y
Sbjct: 260 AEIYNESFGRDPEFYQLYRTLLSYEKTIGDQTVIVLPADSPYARILMGY 308
>pir||A71722 hflC protein (hflC) RP123 - Rickettsia prowazekii
>gi|3860691|emb|CAA14592.1| (AJ235270) HFLC PROTEIN
(hflC) [Rickettsia prowazekii]
Length = 286
Score = 94.0 bits (230), Expect = 2e-18
Identities = 72/270 (26%), Positives = 133/270 (48%), Gaps = 14/270 (5%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLD-PGIHFIIPFMERVKVVDLREHV 69
I+ G+ L+ L SV Q +V + G+ R ++ PG++ IPF++ V+ D R
Sbjct: 12 IVFGLMLIASALFSVD---QRQSAVVFQFGEAIRTIENPGLNIKIPFIQNVEFFDKRLLD 68
Query: 70 IDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLA---QTNLRAIIGE 126
++V +E+ D V VDA +QI +PV V D+ ++L ++++R +IG+
Sbjct: 69 VEVEAKELTAADGKRVIVDAYAKFQINNPVMFYKTVHDYQGVKIRLTRNLESSMRKVIGK 128
Query: 127 MELDETLSG-RDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAERE 185
+ L LS R + + +++ +G+ + V I R D PK+ A+ ++M RE
Sbjct: 129 ISLSSLLSQERSNVMLNILNQVNGEAKSFGIDVVDVRILRADLPKENSAAIYRRMQTARE 188
Query: 186 KRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALKMADE 245
K A + AEG++E+ ++ K++ I+ A+ + QI+ +G +A K+ A D
Sbjct: 189 KEATQIRAEGQEESVRIRSKADKESKIILAKAYRDAQIIKGDGDEKA-AKIYNAAYSVDP 247
Query: 246 KYLTLQYIEKLPDLAKYGNLIVPYDTESLI 275
++ + L Y N + DT +I
Sbjct: 248 -----EFYKFYRSLLVYKNALKKEDTNFVI 272
>pir||A83028 proteinase subunit HflC PA4941 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9951221|gb|AAG08326.1|AE004907_4
(AE004907) protease subunit HflC [Pseudomonas
aeruginosa]
Length = 289
Score = 92.4 bits (226), Expect = 5e-18
Identities = 60/230 (26%), Positives = 121/230 (52%), Gaps = 20/230 (8%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRL-LDPGIHFIIPFMERVKVVDLREHV 69
+I+G+ I+L SV V++ ++ ++ R G+ + PG+HF IP++ +V+ D R
Sbjct: 9 LIVGVVAAIVLWNSVYVVQQTERAVMLRFGRVVESDVKPGLHFKIPYVNQVRKFDARLLT 68
Query: 70 IDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIV-----KLAQTNLRAII 124
+D P Q + + V VDA +++ D + Y + L I + + LR
Sbjct: 69 LDAPTQRFLTLEKKAVMVDAYAKWRVAD-AERFYTATSGLKQIADERLSRRLEAGLRDQF 127
Query: 125 GEMELDETLSG-RDIINAKLREELDKITDR-WGVKITRVEIQRIDPPKDIQEAMAKQMTA 182
G+ L E +SG RD + + L+++ + G+++ V ++ ID PK++ ++ ++M+
Sbjct: 128 GKRTLHEVVSGERDALMGDITASLNRMAQKELGIEVIDVRVKAIDLPKEVNRSVFERMST 187
Query: 183 EREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEA 232
ERE +EA A+G++ A ++A+ ++QR++++AE E+
Sbjct: 188 ERE-----------REAREHRAKGRELAEGIRADADRQRRVIVAEAYRES 226
>sp|P44546|HFLK_HAEIN HFLK PROTEIN >gi|1075179|pir||A64051 probable integral membrane
proteinase (EC 3.4.-.-) hflK - Haemophilus influenzae
(strain Rd KW20) >gi|1573108|gb|AAC21822.1| (U32701)
hflK protein (hflK) [Haemophilus influenzae Rd]
Length = 410
Score = 90.5 bits (221), Expect = 2e-17
Identities = 61/255 (23%), Positives = 135/255 (52%), Gaps = 5/255 (1%)
Query: 6 GGVALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDL 65
G V + + I +I + I+ ++G+V R G+ + ++ PG+++ F+++V V++
Sbjct: 85 GKVIPLAVAIGAIIWGVNGFYTIKEAERGVVLRFGELHSIVQPGLNWKPTFVDKVLPVNV 144
Query: 66 REHVIDVPPQ-EVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAII 124
E V ++ Q ++ +D +V V+ V Y++ DP K +++V++ ++ + + LR +I
Sbjct: 145 -EQVKELRTQGAMLTQDENMVKVEMTVQYRVQDPAKYLFSVTNADDSLNQATDSALRYVI 203
Query: 125 GEMELDETLS-GRDIINAKLREELDKITDRW--GVKITRVEIQRIDPPKDIQEAMAKQMT 181
G M +++ L+ GR ++ + L++I + G+++ V Q PP+++++A +
Sbjct: 204 GHMSMNDILTTGRSVVRENTWKALNEIIKSYDMGLEVIDVNFQSARPPEEVKDAFDDAIK 263
Query: 182 AEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALK 241
A+ +++ I AE A G Q + +A K R +L A+G+ E ++++L K
Sbjct: 264 AQEDEQRFIREAEAYAREKEPIARGDAQRILEEATAYKDRIVLDAKGEVERLQRLLPEFK 323
Query: 242 MADEKYLTLQYIEKL 256
A + YI+ +
Sbjct: 324 AAPDLLRERLYIQTM 338
>gb|AAF47921.1| (AE003481) CG7468 gene product [Drosophila melanogaster]
Length = 382
Score = 90.1 bits (220), Expect = 3e-17
Identities = 50/126 (39%), Positives = 76/126 (59%), Gaps = 2/126 (1%)
Query: 21 LLLSVKVIRPYQKGLVERLGKFNR--LLDPGIHFIIPFMERVKVVDLREHVIDVPPQEVI 78
L + KV++ Y++ ++ RLG+ + PGI FI+P ++ VDLR DVPPQEV+
Sbjct: 7 LFVCFKVVQEYERAVIFRLGRLMQGGAKGPGIFFILPCIDSYARVDLRTRTYDVPPQEVL 66
Query: 79 CKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDI 138
KD+V V+VDAVVYY++ + ++ NV + + LAQT LR +G L E LS R
Sbjct: 67 TKDSVTVSVDAVVYYRVSNATVSIANVENAHHSTRLLAQTTLRNTMGTRHLHEILSERMT 126
Query: 139 INAKLR 144
I+ ++
Sbjct: 127 ISGTMQ 132
>sp|O51221|HFLK_BORBU HFLK PROTEIN >gi|7463666|pir||C70125 Lambda CII stability-governing
protein (hflK) homolog - Lyme disease spirochete
>gi|2688090|gb|AAC66586.1| (AE001130) Lambda CII
stability-governing protein (hflK) [Borrelia
burgdorferi]
Length = 311
Score = 88.5 bits (216), Expect = 8e-17
Identities = 68/253 (26%), Positives = 127/253 (49%), Gaps = 25/253 (9%)
Query: 10 LIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMER-----VKVV- 63
+II I + I+++ ++ ++ P ++ +V RLGK NR LD GIH IP +E VK+V
Sbjct: 17 IIITLILISIIVIANIFIVGPSEEAIVLRLGKLNRTLDSGIHVKIPLIEEKFIVPVKIVQ 76
Query: 64 -----------DLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAI 112
D+RE+ +I D ++ ++ +V Y+I DP + V D I
Sbjct: 77 EIKFGFLISPSDIRENDNANDESRIITGDLNIINIEWLVQYKIRDPYSFKFKVEDPETTI 136
Query: 113 VKLAQTNLRAIIGEMELDETLSGRDI-INAKLREELDKITDRW--GVKITRVEIQRIDPP 169
+A++++ +IG+ + E ++ + I ++ +++I D + G+ + +V+I+ PP
Sbjct: 137 KDIAKSSMNRLIGDNTIFEIINDNRVGITEGVKSSMNEIIDNYNLGIDVVQVQIRNALPP 196
Query: 170 K-DIQEAMAKQMTAEREKRAMILIAEGKKE--AAIREAEGQKQAAILKAEGEKQRQILIA 226
K + EA A ++K I EG+KE + + +G+ I +A G K+ +I A
Sbjct: 197 KGKVYEAFEDVNIAIQDKNK--YINEGRKEFNQIVPKIKGEALKVIEEARGYKESRINNA 254
Query: 227 EGQAEAIRKVLEA 239
E +L+A
Sbjct: 255 LADTEIFNAILDA 267
>sp|P25661|HFLC_ECOLI HFLC PROTEIN >gi|280066|pir||C43653 probable integral membrane
proteinase (EC 3.4.-.-) hflC - Escherichia coli
>gi|436158|gb|AAC43400.1| (U00005) putative integral
membrane protease required for high frequency
lysogenization by bacteriophage lambda [Escherichia
coli] >gi|537016|gb|AAA97071.1| (U14003) CG Site No.
17520; alternate gene name hflA; putative integral
membrane protease required for high frequency
lysogenization by bacteriophage lambda [Escherichia
coli] >gi|1790617|gb|AAC77132.1| (AE000489) protease
specific for phage lambda cII repressor [Escherichia
coli K12]
Length = 334
Score = 88.2 bits (215), Expect = 1e-16
Identities = 71/291 (24%), Positives = 133/291 (45%), Gaps = 52/291 (17%)
Query: 9 ALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNR-------LLDPGIHFIIPFMERVK 61
++I + I +L++L +SV V++ ++G+ R GK R + +PG+HF IPF+E VK
Sbjct: 4 SVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIETVK 63
Query: 62 VVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVY-----NVSDFLMAIVKLA 116
++D R +D + K+ + VD+ + ++I D + ++S + + +
Sbjct: 64 MLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDISQAEVLLKRKF 123
Query: 117 QTNLRAIIGEMELDE---------TLSGRDIINAKLREELDKITD--------------- 152
LR+ IG +++ + TL RD +N+ D++T
Sbjct: 124 SDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVTTPAADNAIAEAAERVT 183
Query: 153 ----------------RWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGK 196
G+++ V I++I+ P ++ EA+ +M AERE A ++G+
Sbjct: 184 AETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEAIYNRMRAEREAVARRHRSQGQ 243
Query: 197 KEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALKMADEKY 247
+EA A + AE E+Q +I+ EG AEA + +A + Y
Sbjct: 244 EEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAKLFADAFSKDPDFY 294
>gi|4759148 stomatin-like protein 1 [Homo sapiens] >gi|4160546|emb|CAA76271.1|
(Y16522) SLP-1 protein [Homo sapiens]
Length = 394
Score = 86.6 bits (211), Expect = 3e-16
Identities = 54/175 (30%), Positives = 93/175 (52%), Gaps = 8/175 (4%)
Query: 13 LGIFLLIMLL-----LSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLRE 67
LG LL++ ++K++ Y++ +V RLG+ PG+ ++PF++ + VDLR
Sbjct: 62 LGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRT 121
Query: 68 HVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEM 127
+VPP ++ KD V++V A V ++I DPV +V V D A AQ + + +
Sbjct: 122 RAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKR 181
Query: 128 ELDETLSGRDIINAKLREELDKITDRWGVKITRVEI---QRIDPPKDIQEAMAKQ 179
L E + I+ +L E++ +T WG+++ RVE+ + PP+D Q A Q
Sbjct: 182 PLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSQLAQPGQ 236
>pir||T32977 unc-24 protein - Caenorhabditis elegans >gi|1353669|gb|AAB06496.1|
(U42013) UNC-24 [Caenorhabditis elegans]
>gi|2854188|gb|AAC02604.1| (AF045644) C. elegans UNC-24
bipartite protein similar to both erythrocyte band 7.2
(stomatin) and nonspecific lipid transfer protein
(GB:U42013) [Caenorhabditis elegans]
Length = 415
Score = 85.4 bits (208), Expect = 7e-16
Identities = 53/166 (31%), Positives = 91/166 (53%), Gaps = 2/166 (1%)
Query: 8 VALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLRE 67
V+ + + + + + LL ++K I +K +V RLG+ + PGI +IP ++ V +
Sbjct: 71 VSFLFVVMTMPLSLLFALKFISTSEKLVVLRLGRAQKTRGPGITLVIPCIDTTHKVTMSI 130
Query: 68 HVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEM 127
+VPP ++I D +V + A V+ +I DP+ AV V D ++ LA T L I +
Sbjct: 131 TAFNVPPLQIITTDRGLVELGATVFLKIRDPIAAVCGVQDRNASVRTLANTMLYRYISKK 190
Query: 128 ELDETLSGRD--IINAKLREELDKITDRWGVKITRVEIQRIDPPKD 171
+ + S +D II+A L++EL T ++GV+IT VEI + K+
Sbjct: 191 RICDVTSSQDRRIISANLKDELGSFTCQFGVEITDVEISDVKIVKE 236
>sp|P57631|HFLK_BUCAI HFLK PROTEIN >gi|10039224|dbj|BAB13258.1| (AP001119) hflK protein
[Buchnera sp. APS]
Length = 406
Score = 85.4 bits (208), Expect = 7e-16
Identities = 64/255 (25%), Positives = 122/255 (47%), Gaps = 5/255 (1%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLREHVI 70
II+ I I + I ++G+V GKF+ L+ PG+++ F VK V++ E V
Sbjct: 70 IIIFISFFIWGVSGFYTITEAERGVVTSFGKFSHLVQPGLNWRPVFFNEVKPVNV-ETVR 128
Query: 71 DVPPQEV-ICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMEL 129
++ + + D VV V+ V Y+I +P +++V ++ + + LR +IG +
Sbjct: 129 ELATSGIMLTADENVVRVEMNVQYKITNPADYLFSVCYPDDSLRQATDSALRGVIGHSTM 188
Query: 130 DETLS-GRDIINAKLREELDKITD--RWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREK 186
D L+ GR ++ + ++E++ + G+ I V Q PP++++ A + A +
Sbjct: 189 DRVLTEGRTLVRSDTQKEIENTIKPYKMGITILDVNFQTARPPEEVKAAFDDAIAARENR 248
Query: 187 RAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALKMADEK 246
+ AE +A G+ Q + +A+ R IL A+G+ K+L ++A +
Sbjct: 249 EQYVREAEAYSNEVKPKANGKAQRILEEAKSYSSRIILQAQGEVARFSKILPEYRIAKKI 308
Query: 247 YLTLQYIEKLPDLAK 261
L YIE + L +
Sbjct: 309 TLKRLYIESMERLLR 323
>emb|CAB52016.1| (AL109665) SLP-1 [Homo sapiens]
Length = 390
Score = 84.3 bits (205), Expect = 2e-15
Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 13 LGIFLLIMLL-----LSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLRE 67
LG LL++ ++K++ Y++ +V RLG+ PG+ ++PF++ + VDLR
Sbjct: 55 LGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRT 114
Query: 68 HVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEM 127
+VPP ++ KD V++V A V ++I DPV +V V D A AQ + + +
Sbjct: 115 RAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKR 174
Query: 128 ELDETLSGRDIINAKLREELDKITDRWGVKITRVEI---QRIDPPKD 171
L E + I+ +L E++ +T WG+++ RVE+ + PP+D
Sbjct: 175 PLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQD 221
>gb|AAF06960.1| (AF156557) stomatin related protein [Homo sapiens]
>gi|6671068|gb|AAF23080.1| (AF156564) stomatin related
protein [Homo sapiens]
Length = 398
Score = 84.3 bits (205), Expect = 2e-15
Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 13 LGIFLLIMLL-----LSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLRE 67
LG LL++ ++K++ Y++ +V RLG+ PG+ ++PF++ + VDLR
Sbjct: 62 LGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRT 121
Query: 68 HVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEM 127
+VPP ++ KD V++V A V ++I DPV +V V D A AQ + + +
Sbjct: 122 RAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKR 181
Query: 128 ELDETLSGRDIINAKLREELDKITDRWGVKITRVEI---QRIDPPKD 171
L E + I+ +L E++ +T WG+++ RVE+ + PP+D
Sbjct: 182 PLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQD 228
>pir||B82806 integral membrane proteinase XF0453 [imported] - Xylella fastidiosa
(strain 9a5c) >gi|9105297|gb|AAF83263.1|AE003895_14
(AE003895) integral membrane proteinase [Xylella
fastidiosa]
Length = 287
Score = 84.3 bits (205), Expect = 2e-15
Identities = 72/233 (30%), Positives = 116/233 (48%), Gaps = 10/233 (4%)
Query: 11 IILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRL-LDPGIHFIIPFMERVKVVDLREHV 69
I++ L + L S+ V+R Q +V LG+ R L G+HF IP +E V++ D R V
Sbjct: 7 IVVTAVLFLSLFSSIFVVREDQTAMVINLGRVVRYDLKSGLHFKIPLVESVRLFDRRFKV 66
Query: 70 IDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVS--DFLMAIVKLAQT---NLRAII 124
+ P + V+VD I D V++ Y + D A +LA +LR I
Sbjct: 67 MATEPARYFTAEQKDVSVDFFAIGYIED-VRSFYRATGGDESQAAARLAPIITDSLRNQI 125
Query: 125 GEMELDETLSG-RDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQ--EAMAKQMT 181
L E +SG R + A + ++ T GV I + I++I+ P D Q + ++M
Sbjct: 126 NSRTLQELVSGDRSELIAGQLKSINAATKGLGVHIVDLRIKQIELPVDSQVISDVYERMR 185
Query: 182 AEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIR 234
A+R++ A L AEG++ + A+ +++ +L A+ E+ Q L EG AEA R
Sbjct: 186 AQRKQEAAKLRAEGEERSLSIRAQADRESTVLIADAERDAQKLRGEGDAEAAR 238
>gi|11432457 stomatin-like protein 1 [Homo sapiens]
Length = 267
Score = 84.3 bits (205), Expect = 2e-15
Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 13 LGIFLLIMLL-----LSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLRE 67
LG LL++ ++K++ Y++ +V RLG+ PG+ ++PF++ + VDLR
Sbjct: 62 LGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRT 121
Query: 68 HVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEM 127
+VPP ++ KD V++V A V ++I DPV +V V D A AQ + + +
Sbjct: 122 RAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKR 181
Query: 128 ELDETLSGRDIINAKLREELDKITDRWGVKITRVEI---QRIDPPKD 171
L E + I+ +L E++ +T WG+++ RVE+ + PP+D
Sbjct: 182 PLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQD 228
>emb|CAB64583.1| (AL135941) hypothetical protein L391.06 [Leishmania major]
Length = 277
Score = 83.9 bits (204), Expect = 2e-15
Identities = 71/236 (30%), Positives = 115/236 (48%), Gaps = 12/236 (5%)
Query: 34 GLVERLGKFNRLLDPGIHFIIPFMERVKVVDLR--EHVIDVPPQEVICKDNVVVTVDAVV 91
G+VE G+F+ DPGIH + V+ V LR E+ + V E KDNV VT+ V+
Sbjct: 13 GIVETCGRFSYTADPGIHCLWCGSVLVRRVTLRLQEYELKV---ESKTKDNVFVTLSLVI 69
Query: 92 YYQIL-DPVKAVYNVSDFLMAIVK-LAQTNLRAIIGEMELDETLSGRDIINAKLREELDK 149
YQ+ D + VY D + ++ ++RA I +L+ R I+ +L++E+D
Sbjct: 70 QYQVSPDKLAEVYYACDSSLQCMRDYVLNSIRAKIPLYKLEALYVERGTISQQLKDEVDA 129
Query: 150 ITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQ 209
I +G++I I IDP +I +AM + +R + A + AE +K +R AE + +
Sbjct: 130 IIGTYGIEIVSALISDIDPGAEITKAMNEVQKFQRLRVASVDAAETEKLKRVRAAEARCE 189
Query: 210 AAILKAEGEKQRQILIAEGQAEAIRKVLEALK-----MADEKYLTLQYIEKLPDLA 260
A L EG +++ I G +I V ++ A L QY + L +A
Sbjct: 190 ARRLSGEGLAEQRKAIVAGLMHSIEDVQSEVRDLTSNDATNMLLMNQYYDTLQAIA 245
>sp|P57630|HFLC_BUCAI HFLC PROTEIN >gi|10039223|dbj|BAB13257.1| (AP001119) hflC protein
[Buchnera sp. APS]
Length = 310
Score = 83.5 bits (203), Expect = 3e-15
Identities = 71/291 (24%), Positives = 140/291 (47%), Gaps = 27/291 (9%)
Query: 10 LIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNR-------LLDPGIHFIIPFMERVKV 62
LI L ++L S +++ ++G+V + GK R + +PG+HF PF+E VK+
Sbjct: 5 LIFASSVLFLILSSSFFIVKEGERGIVLQFGKVLRNNELKTVVYNPGLHFKWPFLETVKM 64
Query: 63 VDLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVK--AVYNVSDFLMAIVKLAQ--- 117
+D R H +D + K+ + VD+ + ++I D + D A V L +
Sbjct: 65 LDARIHTMDNQADRFVTKEKKDLIVDSYIKWRINDFSRYYLATGGGDVFQAEVLLKRKFS 124
Query: 118 TNLRAIIGEMELDETLS---GR---DIINA--KLREELDKIT-------DRWGVKITRVE 162
LR+ IG + + E ++ GR D++N+ K L+K + + G+ + V
Sbjct: 125 DRLRSEIGRLNVKEIVTDSRGRLTTDVLNSLNKGSMNLEKSSLINVNSMNALGIHVVDVR 184
Query: 163 IQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQ 222
I++I+ P ++ +A+ +M AERE A ++G+++A A + +I+ +E K+
Sbjct: 185 IKQINLPVEVSDAIYNRMRAEREAVARSQRSQGQEKAEKLRASADYKVSIILSEARKEAL 244
Query: 223 ILIAEGQAEAIRKVLEALKMADEKYLTLQYIEKLPDLAKYGNLIVPYDTES 273
I+ +G+AE + + + Y ++ + + K I+ D++S
Sbjct: 245 IIKGQGEAEVTKLFAKNFNKEPDFYFFIRSLRAYENSFKNNRNIMLIDSDS 295
>sp|O83151|HFLK_TREPA HFLK PROTEIN >gi|7521161|pir||H71364 probable Lambda CII
stability-governing protein (hflK) - syphilis spirochete
>gi|3322375|gb|AAC65102.1| (AE001196) Lambda CII
stability-governing protein (hflK) [Treponema pallidum]
Length = 328
Score = 83.1 bits (202), Expect = 4e-15
Identities = 74/302 (24%), Positives = 142/302 (46%), Gaps = 27/302 (8%)
Query: 12 ILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDL------ 65
+LGI +++ + +++I P G+V R GK++R L+PG+H++IPF+E V V +
Sbjct: 21 VLGI-VIVGIASPIRIISPTDNGVVTRFGKYHRTLEPGLHYLIPFVEWVYKVPVTKVQKE 79
Query: 66 -----------REHVIDVPPQE--VICKDNVVVTVDAVVYYQILDPVKAVYNV--SDFLM 110
+ H ++ E ++ D +V V+ VV Y+I+DP V+NV +
Sbjct: 80 EFGFRTSKSSEQSHYVNNISHESLMLTGDLNIVDVEWVVQYRIVDPRAWVFNVESQERRQ 139
Query: 111 AIVKLAQTNLRAIIGEME-LDETLSGRDIINAKLREELDKITDR--WGVKITRVEIQRID 167
I +++ + ++IG+ LD R I + ++ ++ + R GV ++ V++Q +
Sbjct: 140 TIRDISKAVVNSLIGDRAILDIMGPERSAIQMRAKDMMNVLLKRIGLGVLVSSVQLQNVV 199
Query: 168 PPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAE 227
PP+++Q+A A ++ +I + I +A G I +A G ++ A+
Sbjct: 200 PPQEVQQAFEDVNIAIQDMNRLINEGKESYNREIPKARGDADKLIQEAMGYANERVNRAK 259
Query: 228 GQAEAIRKVLEALKMADEKYLTLQYIEKL-PDLAKYGN-LIVPYDTESLIGLLRVLQKVK 285
G + A T Y+E L L K N L++ E+L+ L + + K
Sbjct: 260 GDVARFDSIYAEYVKAPHVTKTRLYLEGLGAILEKTENVLLIDKKLENLLTLKDISKVSK 319
Query: 286 SI 287
+
Sbjct: 320 KV 321
>gb|AAF03497.1|AC010676_7 (AC010676) unknown protein [Arabidopsis thaliana]
>gi|6714460|gb|AAF26146.1|AC008261_3 (AC008261) unknown
protein [Arabidopsis thaliana]
Length = 285
Score = 80.4 bits (195), Expect = 2e-14
Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 7/202 (3%)
Query: 37 ERLGKFNRLLDPGIHFIIPFMERVKV---VDLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
ER GKF ++L+PG+ F+ P++ V + LR +DV E KDNV VTV A + Y
Sbjct: 19 ERFGKFQKVLNPGLQFV-PWVIGDYVAGTLTLRLQQLDVQC-ETKTKDNVFVTVVASIQY 76
Query: 94 QIL--DPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKIT 151
++L A Y +S+ I +RA + ++ LD+ ++ I + EELDK
Sbjct: 77 RVLADKASDAFYRLSNPTTQIKAYVFDVIRACVPKLNLDDVFEQKNEIAKSVEEELDKAM 136
Query: 152 DRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAA 211
+G +I + I I+P + ++ AM + A R + A AE +K I+ AEG+ ++
Sbjct: 137 TAYGYEILQTLIIDIEPDQQVKRAMNEINAAARMRVAASEKAEAEKIIQIKRAEGEAESK 196
Query: 212 ILKAEGEKQRQILIAEGQAEAI 233
L G +++ I +G +++
Sbjct: 197 YLSGLGIARQRQAIVDGLRDSV 218
>gb|AAF07389.1|AC010675_12 (AC010675) unknown protein; 58197-59415 [Arabidopsis thaliana]
Length = 286
Score = 80.0 bits (194), Expect = 3e-14
Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 15/246 (6%)
Query: 37 ERLGKFNRLLDPGIHFIIPFMERVKV---VDLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
E GKF+ +L+PG H +P+ +V + LR +DV E KDNV VTV A + Y
Sbjct: 19 ETFGKFDEVLEPGCH-CLPWCLGSQVAGHLSLRVQQLDVRC-ETKTKDNVFVTVVASIQY 76
Query: 94 QIL--DPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKIT 151
+ L A Y +S+ I +RA + +++LD T ++ I + EL+K
Sbjct: 77 RALAESAQDAFYKLSNTRNQIQAYVFDVIRASVPKLDLDSTFEQKNDIAKTVETELEKAM 136
Query: 152 DRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAA 211
+G +I + I I+P ++ AM + A R + A AE +K I+ AEG+ ++
Sbjct: 137 SHYGYEIVQTLIVDIEPDVHVKRAMNEINAASRMREAASEKAEAEKILQIKRAEGEAESK 196
Query: 212 ILKAEGEKQRQILIAEGQAEAIRKVLEALKMADEK-----YLTLQYIEKLPDL---AKYG 263
L G +++ I +G ++ E++ K L QY + L ++ +K
Sbjct: 197 YLSGMGIARQRQAIVDGLRNSVLAFSESVPGTSSKDVMDMVLVTQYFDTLKEIGASSKSN 256
Query: 264 NLIVPY 269
++ +P+
Sbjct: 257 SVFIPH 262
>dbj|BAB06874.1| (AP001517) protease specific for phage lambda cII repressor
[Bacillus halodurans]
Length = 319
Score = 79.6 bits (193), Expect = 4e-14
Identities = 75/313 (23%), Positives = 146/313 (45%), Gaps = 31/313 (9%)
Query: 8 VALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLD-PGIHFIIPF-MERVKVV-- 63
+ ILG+FL+ ++ ++ + GK +D PG+ F +P+ +++V+++
Sbjct: 14 IGAAILGLFLVT----GWYIVDETEQAALITFGKVEETIDEPGLKFKMPWPIQKVEILPR 69
Query: 64 -----------DLREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAI 112
D E V ++I D +V D V ++I DP + +Y+ D +
Sbjct: 70 GTFNLQVGYKEDEGEVVEFTDEAKMITGDENIVFADLAVQWRITDPEQYLYSTEDPKELL 129
Query: 113 VKLAQTNLRAIIGEMELDETLSG-RDIINAKLREELDKITDRW--GVKITRVEIQRID-P 168
+ LR++IG +DE L+ R I A + E L ++ D + G+ I+ V++Q ++ P
Sbjct: 130 YNATSSALRSVIGSASVDEALTDERPTIEADIFESLVELMDLYQIGISISDVKLQDVELP 189
Query: 169 PKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEG 228
++++ A A E+ I A + E EG+K A I +AEG++ +I A G
Sbjct: 190 TEEVRRAFTDVTDAREERLTKINEANRYRNQETNEVEGEKDAIISRAEGQRADRIETARG 249
Query: 229 QAEAIRKVLEALKM---ADEKYLTLQYIEK-LPDLAKYGNLIVPYDTESLIGL-LRVLQK 283
+ E + + L L+ +E LPD Y I+ + +++ L +R L++
Sbjct: 250 DVARFNALYEEYLVNPDVTRQRLVLETLESILPDTEIY---IMDSNNDTINYLPIRPLER 306
Query: 284 VKSIPLQQSTEKK 296
+ P+++ T +
Sbjct: 307 QQQAPVEEGTNNE 319
>gb|AAF68390.1|AF236374_1 (AF236374) hypersensitive-induced response protein [Zea mays]
Length = 284
Score = 78.8 bits (191), Expect = 7e-14
Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 15/246 (6%)
Query: 37 ERLGKFNRLLDPGIHFIIPFMERVKV---VDLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
E GKF+ +L+PG HF+ P+ ++ + LR +DV E KDNV VTV A V Y
Sbjct: 19 ENFGKFSEVLEPGCHFL-PWCIGQQIAGYLSLRVRQLDVRC-ETKTKDNVFVTVVASVQY 76
Query: 94 QIL--DPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKIT 151
+ L A Y +S+ I +RA + ++ LD+ ++ I + EEL+K
Sbjct: 77 RALADKASDAFYKLSNTREQIQSYVFDVIRATVPKLGLDDAFEQKNEIAKAVEEELEKAM 136
Query: 152 DRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAA 211
+G +I + I I+P ++ AM + A R + A AE +K I++AEG+ ++
Sbjct: 137 STYGYQIVQTLIVDIEPDDRVKRAMNEINAAARMRVAASEKAEAEKILQIKKAEGEAESK 196
Query: 212 ILKAEGEKQRQILIAEGQAEAIRKVLE-----ALKMADEKYLTLQYIEKLPDL---AKYG 263
L G +++ I +G +++ E K + L QY + + ++ +K
Sbjct: 197 YLAGVGIARQRQAIVDGLRDSVLAFSENVPGTTAKDIMDMVLVTQYFDTMREIGASSKSS 256
Query: 264 NLIVPY 269
++ +P+
Sbjct: 257 SVFIPH 262
>gb|AAF68391.1|AF236375_1 (AF236375) hypersensitive-induced response protein [Zea mays]
Length = 287
Score = 77.6 bits (188), Expect = 2e-13
Identities = 60/202 (29%), Positives = 101/202 (49%), Gaps = 7/202 (3%)
Query: 37 ERLGKFNRLLDPGIHFIIPFMERVKV---VDLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
E+ GKF+ +L+PG H +P+ +V + LR +DV E KDNV V V A + Y
Sbjct: 19 EQFGKFDSVLEPGCH-CMPWFAGKRVAGQLTLRLQQLDVRC-ETKTKDNVFVNVVASIQY 76
Query: 94 QIL--DPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKIT 151
+ L A Y +S+ I +RA + ++ LD+ +D I + EEL+K
Sbjct: 77 RALADKASDAFYKLSNTRSQIQAYVFDVIRASVPKLHLDDAFEQKDEIARAVEEELEKAM 136
Query: 152 DRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAA 211
+G +I + I I+P + ++ AM + A R + A AE +K I+ AEG+ +A
Sbjct: 137 SAYGFEIVQTLIVDIEPDEHVKRAMNEINAAARLRAAANEKAEAEKIVQIKRAEGEAEAK 196
Query: 212 ILKAEGEKQRQILIAEGQAEAI 233
L G +++ I +G +++
Sbjct: 197 YLSGLGIARQRQAIVDGLRDSV 218
>gb|AAF68389.1|AF236373_1 (AF236373) hypersensitive-induced response protein [Zea mays]
Length = 284
Score = 76.9 bits (186), Expect = 3e-13
Identities = 66/246 (26%), Positives = 117/246 (46%), Gaps = 15/246 (6%)
Query: 37 ERLGKFNRLLDPGIHFIIPFMERVKV---VDLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
E GKF+ +L+PG HF+ P+ ++ + LR +DV E KDNV V V A V Y
Sbjct: 19 ETFGKFDEVLEPGCHFL-PWCIGKQIAGYLSLRVQQLDVRC-ETKTKDNVFVNVVASVQY 76
Query: 94 QIL--DPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKIT 151
+ L A Y +S+ I +RA + +M LD+ ++ I + EL+K
Sbjct: 77 RALADKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDAFEQKNEIAKAVENELEKAM 136
Query: 152 DRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAA 211
+G +I + I I+P + ++ AM + A R + A AE +K I+ AEG ++
Sbjct: 137 SMYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRLAASEKAEAEKILQIKRAEGDAESK 196
Query: 212 ILKAEGEKQRQILIAEGQAEAIRKVLE-----ALKMADEKYLTLQYIEKLPDL---AKYG 263
L G +++ I +G +++ E + K + L QY + + ++ +K
Sbjct: 197 YLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSAKDVMDMVLVTQYFDTMKEIGASSKSS 256
Query: 264 NLIVPY 269
++ +P+
Sbjct: 257 SVFIPH 262
>pir||I39620 hypothetical protein X - Anabaena variabilis (fragment)
>gi|600250|dbj|BAA04562.1| (D17710) orfX [Anabaena
variabilis]
Length = 293
Score = 76.5 bits (185), Expect = 4e-13
Identities = 53/211 (25%), Positives = 105/211 (49%), Gaps = 3/211 (1%)
Query: 28 IRPYQKGLVERLGKFNRLLDPGIH--FIIPFMERVKVVDLREHVIDVPPQEVICKDNVVV 85
+ P GL+ +F L G H ++ + +V DLR+ ++V Q+++ KD V +
Sbjct: 65 VPPQHIGLLYINQEFQAQLPSGKHAWWLFGRSWQTEVFDLRQQTLEVSGQDILSKDKVPL 124
Query: 86 TVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLRE 145
++ Y++LDP++A +SD L + K Q LR +GE LD L + I+ + E
Sbjct: 125 RLNLTAGYRLLDPLRARNGLSDILNYLYKELQFALRGAVGERSLDALLEDKGTIDRSIFE 184
Query: 146 ELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAE 205
+ + T +G+++ V ++ I P +I+ ++K + AE+ +A + + ++ AA R
Sbjct: 185 YIRQKTADYGIEVDSVGVKDIILPGEIKTILSKVVEAEKAAQANV-VRRREETAATRSML 243
Query: 206 GQKQAAILKAEGEKQRQILIAEGQAEAIRKV 236
+ + +++ + E AE I K+
Sbjct: 244 NTARVMEDNPVALRLKELEVLERIAEKIEKI 274
>pir||E83340 hypothetical protein PA2438 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9948485|gb|AAG05826.1|AE004671_2
(AE004671) hypothetical protein [Pseudomonas aeruginosa]
Length = 341
Score = 75.7 bits (183), Expect = 6e-13
Identities = 72/269 (26%), Positives = 128/269 (46%), Gaps = 26/269 (9%)
Query: 10 LIILGIFLLIMLLLSVKV-IRPYQKGLVERLGKFNR-LLDPGIHFIIPF-MERVKVVDLR 66
L++ + +L + + V +R + ++ R G R LL+PG+ + +P E VDLR
Sbjct: 37 LLVAALLVLFAVAAACLVQVRSGEAMVITRFGNPARVLLEPGLAWRLPLPFESAIPVDLR 96
Query: 67 EHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKL---AQTNLRAI 123
Q+V +D + + V A V +Q+ NV F+ A+ A LR
Sbjct: 97 LRTTSSGLQDVGTRDGLRIIVQAYVAWQVQGDAD---NVQRFMRAVRNQPDEAARQLRTF 153
Query: 124 IGEMELDETLSGRDIIN---------------AKLREELD-KITDRWGVKITRVEIQRID 167
+G L+ T S D+ + A+LRE++D ++ +GVK+ +V I+R+
Sbjct: 154 VGSA-LETTASAYDLADLVNTEASRVRIGDFEARLREQIDHQLLATYGVKVVQVGIERLT 212
Query: 168 PPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAE 227
PK A +M AERE A AEG+++AA + ++ A +++AE + + A+
Sbjct: 213 LPKVTLGATVDRMRAERETIATERTAEGRRQAAEIRSAAERDARVIQAEASVKAAEIEAQ 272
Query: 228 GQAEAIRKVLEALKMADEKYLTLQYIEKL 256
+ EA R +A + + Y L+ ++ L
Sbjct: 273 ARVEAARIYGKAYAGSPQLYNLLRSLDTL 301
>emb|CAC07434.1| (AJ292360) putative membrane protein [Zea mays]
Length = 284
Score = 75.3 bits (182), Expect = 8e-13
Identities = 64/233 (27%), Positives = 110/233 (46%), Gaps = 12/233 (5%)
Query: 37 ERLGKFNRLLDPGIHFIIPFMERVKV---VDLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
E GKF+ +L+PG HF+ P+ ++ + LR +DV E KDNV V V A V Y
Sbjct: 19 ETFGKFDEVLEPGCHFL-PWCIGKQIAGYLSLRVQQLDVRC-ETKTKDNVFVNVVASVQY 76
Query: 94 QIL--DPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKIT 151
+ L A Y +S+ I +RA + +M LD+ ++ I + EL+K
Sbjct: 77 RALADKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDAFEQKNEIAKAVENELEKAM 136
Query: 152 DRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAA 211
+G +I + I I+P + ++ AM + A R + A AE +K I+ AEG ++
Sbjct: 137 SMYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRLAASEKAEAEKILQIKRAEGDAESK 196
Query: 212 ILKAEGEKQRQILIAEGQAEAIRKVLE-----ALKMADEKYLTLQYIEKLPDL 259
L G +++ I +G +++ E + K + L QY + + ++
Sbjct: 197 YLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSAKDVMDMVLVTQYFDTMEEI 249
>dbj|BAB08673.1| (AB018109) gb|AAF03497.1~gene_id:K17N15.12~similar to unknown
protein [Arabidopsis thaliana]
Length = 292
Score = 73.4 bits (177), Expect = 3e-12
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 10/235 (4%)
Query: 34 GLVERLGKFNRLLDPGIHFIIPFMER--VKVVDLREHVIDVPPQEVICKDNVVVTVDAVV 91
G+VER G+F + +PG HF P + V+ R +DV E KDNV V + +
Sbjct: 18 GVVERWGRFEHIAEPGCHFFNPLAGQWLAGVLSTRIKSLDVKI-ETKTKDNVFVQLVCSI 76
Query: 92 YYQILDPVK--AVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDK 149
Y+++ A Y + + I +RA++ M LD + + + EEL+K
Sbjct: 77 QYRVVKASADDAFYELQNPKEQIQAYVFDVVRALVPMMTLDALFEQKGEVAKSVLEELEK 136
Query: 150 ITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQ 209
+ +G I + + I P +++AM + A+R + A + E +K ++ AE + +
Sbjct: 137 VMGAYGYSIEHILMVDIIPDPSVRKAMNEINAAQRLQLASVYKGEAEKILQVKRAEAEAE 196
Query: 210 AAILKAEGEKQRQILIAEGQAEAIRKVLEALKMADEK-----YLTLQYIEKLPDL 259
A L G +++ I +G E I + ++ K + QY + + DL
Sbjct: 197 AKYLGGVGVARQRQAITDGLRENILNFSDKVEGTSAKEVMDLIMITQYFDTIRDL 251
>pir||C81445 probable transmembrane protein Cj0268c [imported] - Campylobacter
jejuni (strain NCTC 11168) >gi|6967745|emb|CAB72736.1|
(AL139074) putative transmembrane protein [Campylobacter
jejuni]
Length = 362
Score = 73.0 bits (176), Expect = 4e-12
Identities = 62/283 (21%), Positives = 138/283 (47%), Gaps = 38/283 (13%)
Query: 6 GGVALIILGIFLLIMLLLSVK---VIRPYQKGLVERLGKFN-RLLDPGIHFIIPFMERVK 61
G + + G+ ++I+ L+ K VI + G+ GK++ L+PG+HF +PF++++
Sbjct: 40 GKFSPFVYGVIIIILFLIVAKPFMVINSGEMGIKSTTGKYDPNPLEPGLHFFLPFVQKIT 99
Query: 62 VVDLREHVIDVPPQE-----------VICKDNV--------VVTVDAVVYYQILDPVKAV 102
++D R I+ E VI K+++ V++D V Y+ L+P++
Sbjct: 100 IIDTRVRQINYASIEGSNENLSSGSGVINKNSISVLDSRGLPVSIDVTVQYR-LNPLQVP 158
Query: 103 YNVSDFLM-----AIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKITD---RW 154
++ + + I + + +R+++G+ +E + R+ I ++ E + K +
Sbjct: 159 QTIATWSLNWENKIIDPVVRDVVRSVVGKYTAEELPTNRNTIATQIEEGIRKTIEAQPNE 218
Query: 155 GVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIRE---AEGQKQAA 211
V++ V+++ I P ++E + + A++E E + A+++ AEG+ A
Sbjct: 219 PVELRAVQLREIILPSKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAEGEANAT 278
Query: 212 ILKAEGEKQRQILIAEGQAEAIRKVLEALKMADEKYLTLQYIE 254
I+ A+G+ + A+ QA + +++ +L + L L+ IE
Sbjct: 279 IISAKGKAMAVKIEADAQAYSNKEIANSL---NTPLLNLKQIE 318
>dbj|BAB10843.1| (AB009053) hypersensitive-induced response protein [Arabidopsis
thaliana]
Length = 286
Score = 72.6 bits (175), Expect = 5e-12
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 37 ERLGKFNRLLDPGIHFIIPFMERVKV---VDLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
E GKF +L+PG HF+ P+ +V + LR +DV E KDNV V V A + Y
Sbjct: 19 ETFGKFEDVLEPGCHFL-PWCLGSQVAGYLSLRVQQLDVRC-ETKTKDNVFVNVVASIQY 76
Query: 94 QIL--DPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKIT 151
+ L A Y +S+ I +RA + ++ LD+ ++ I + EEL+K
Sbjct: 77 RALANKANDAYYKLSNTRGQIQAYVFDVIRASVPKLLLDDVFEQKNDIAKAVEEELEKAM 136
Query: 152 DRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAA 211
+G +I + I I+P + ++ AM + A R + A AE +K I+ AEG+ ++
Sbjct: 137 SAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRLAANEKAEAEKILQIKRAEGEAESK 196
Query: 212 ILKAEGEKQRQILIAEGQAEAI 233
L G +++ I +G +++
Sbjct: 197 YLSGLGIARQRQAIVDGLRDSV 218
>emb|CAB64584.1| (AL135941) hypothetical protein L391.07 [Leishmania major]
Length = 283
Score = 72.2 bits (174), Expect = 7e-12
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 34 GLVERLGKFNRLLDPGIHFIIPFMERVKVVDLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
G++E GKF+R DPG I+P +E V+ V + I E +DN VV ++ ++Y
Sbjct: 15 GIIENCGKFDRTADPGCFCIVPCVESVRGVVSLKVAISTVRVETKTRDNAVVNIETRLHY 74
Query: 94 QILDPVK--AVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKIT 151
+++ A Y S+ I A + +R + + LDE D I + EL +
Sbjct: 75 KVIAECAEDAFYRFSNPSEQIASFAASVVRGEVPKYTLDELFLMSDEIKKVVSAELTEKL 134
Query: 152 DRWGVKITRVEIQRIDPPKDIQEAMAK-QMTAEREKRAMILIAEGKKEAAIREAEGQKQA 210
+G + + RI+P ++ A+++ Q+ A R + AA E+E K
Sbjct: 135 RGFGFSLESTLLTRIEPSASVKTAISQTQINAYR------------RTAAEHESELNKIL 182
Query: 211 AILKAEGEKQRQILIAEGQAEAIRKVLEALKMADEKYL 248
A+ AE + + + L G A+ + +++ LK + E ++
Sbjct: 183 AVKAAEADYEEKRLSGVGLAQERQAIMKGLKSSIESFV 220
>sp|P44545|HFLC_HAEIN HFLC PROTEIN >gi|1074959|pir||I64050 probable integral membrane
proteinase hflC homolog - Haemophilus influenzae (strain
Rd KW20) >gi|1573107|gb|AAC21821.1| (U32701) hflC
protein (hflC) [Haemophilus influenzae Rd]
Length = 295
Score = 71.0 bits (171), Expect = 2e-11
Identities = 56/235 (23%), Positives = 112/235 (46%), Gaps = 22/235 (9%)
Query: 24 SVKVIRPYQKGLVERLGKFNR-------LLDPGIHFIIPFMERVKVVDLREHVIDVPPQE 76
S+ V+ +G++ R K R + +PG+HF +P ++ +KV+D R +D
Sbjct: 19 SIVVVTEGTRGIMLRFNKVQRDADNKVVVYEPGLHFKVPLIDSIKVLDARIRTLDGSATR 78
Query: 77 VICKDNVVVTVDAVVYYQILDPVKAVYNVS--DFLMAIVKLAQT---NLRAIIGEMELDE 131
+ + + VD+ V ++I D + + D+ A L++ LR+ IG + +
Sbjct: 79 FVTVEKKDLLVDSYVKWKISDFGRFYTSTGGGDYAQAANLLSRKVNDRLRSEIGSRTIKD 138
Query: 132 TLSGRDIINAKLREELDKI-------TDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAER 184
+SG +L E K T G+++ V +++I+ P ++ ++ ++M AER
Sbjct: 139 IVSGT---RGELMEGAKKALSSGQDSTAELGIEVIDVRVKQINLPDEVSSSIYQRMRAER 195
Query: 185 EKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEA 239
+ A ++GK++AA +A+ ++ ++ A K Q L G A A + +A
Sbjct: 196 DAVAREHRSQGKEKAAFIQADVDRKVTLILANANKTAQELRGSGDAAAAKLYSDA 250
>emb|CAA10289.1| (AJ131049) hypothetical protein [Cicer arietinum]
Length = 286
Score = 70.6 bits (170), Expect = 2e-11
Identities = 62/246 (25%), Positives = 120/246 (48%), Gaps = 15/246 (6%)
Query: 37 ERLGKFNRLLDPGIHFIIPFMERVKV---VDLREHVIDVPPQEVICKDNVVVTVDAVVYY 93
E+ G+F +L+PG H +P+ ++ + LR +DV E KDNV V V A V Y
Sbjct: 19 EQFGRFVDVLEPGCH-CLPWCLGYQIAGGLSLRVQQLDVKC-ETKTKDNVFVMVVASVQY 76
Query: 94 Q-ILDPVK-AVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAKLREELDKIT 151
+ + D A Y +++ I +RA + ++ELD ++ I + +EL+K
Sbjct: 77 RAVADKASDAFYRLTNTREQIQSYVFDVIRASVPKLELDAVFEQKNDIAKAVEDELEKAM 136
Query: 152 DRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAA 211
+G +I + I ++P +++ AM + A R + A AE +K I++AEG+ ++
Sbjct: 137 SNYGYEIVQTLIVDVEPDVNVKRAMNEINAAARLRLAANDKAEAEKILQIKKAEGEAESK 196
Query: 212 ILKAEGEKQRQILIAEGQAEAIRKVLE-----ALKMADEKYLTLQYIEKLPDL---AKYG 263
L G +++ I +G +++ E + K + L QY + + ++ +K
Sbjct: 197 YLSGLGIARQRQAIVDGLRDSVLAFSENVPGTSAKDVMDMVLVTQYFDTMKEIGASSKSS 256
Query: 264 NLIVPY 269
++ +P+
Sbjct: 257 SVFIPH 262
>gb|AAD42031.1|AF074953_1 (AF074953) stomatin-like protein UNC24 [Homo sapiens]
Length = 393
Score = 69.1 bits (166), Expect = 6e-11
Identities = 51/169 (30%), Positives = 88/169 (51%), Gaps = 11/169 (6%)
Query: 13 LGIFLLIMLL-----LSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLRE 67
LG LL++ ++K++ Y++ +V RLG+ PG+ ++PF++ + VDLR
Sbjct: 57 LGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRT 116
Query: 68 HVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEM 127
+VPP ++ KD V++V A V ++I DPV +V V D A AQ + + +
Sbjct: 117 RAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKR 176
Query: 128 ELDETLSGRDIINAKLREELDKITDR--WGVKITRVEI---QRIDPPKD 171
L E + I+ +L E D+ D+ G ++ RVE+ + PP+D
Sbjct: 177 PLREIQMEKLKISDQLLLE-DQRCDQGLGGWEVDRVELAVEAVLQPPQD 224
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.139 0.374
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94872827
Number of Sequences: 2977
Number of extensions: 3672658
Number of successful extensions: 16160
Number of sequences better than 1.0e-10: 112
Number of HSP's better than 0.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 15761
Number of HSP's gapped (non-prelim): 133
length of query: 299
length of database: 189,106,746
effective HSP length: 59
effective length of query: 240
effective length of database: 153,796,013
effective search space: 36911043120
effective search space used: 36911043120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 165 (68.7 bits)