BLASTP 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= PAB1360 (PAB1360) DE:Hypothetical protein (111 letters) Database: ./suso.pep; /banques/blast2/nr.pep 598,487 sequences; 189,106,746 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||A75066 hypothetical protein PAB1360 - Pyrococcus abyssi (st... 229 6e-60 >pir||A75066 hypothetical protein PAB1360 - Pyrococcus abyssi (strain Orsay) >gi|5458935|emb|CAB50422.1| (AJ248287) hypothetical protein [Pyrococcus abyssi] Length = 111 Score = 229 bits (579), Expect = 6e-60 Identities = 111/111 (100%), Positives = 111/111 (100%) Query: 1 MPINLDDLRANIDEYIEVDEMAFKRGKYNSALIMYFKALVGICDYIIKKELNLEPKNHGE 60 MPINLDDLRANIDEYIEVDEMAFKRGKYNSALIMYFKALVGICDYIIKKELNLEPKNHGE Sbjct: 1 MPINLDDLRANIDEYIEVDEMAFKRGKYNSALIMYFKALVGICDYIIKKELNLEPKNHGE 60 Query: 61 RFSILRRYYPDLYRTVDKFFNFYRDAYERRITKREVGELRNEVLRLTDRIR 111 RFSILRRYYPDLYRTVDKFFNFYRDAYERRITKREVGELRNEVLRLTDRIR Sbjct: 61 RFSILRRYYPDLYRTVDKFFNFYRDAYERRITKREVGELRNEVLRLTDRIR 111 Database: ./suso.pep Posted date: Jul 6, 2001 5:57 PM Number of letters in database: 840,471 Number of sequences in database: 2977 Database: /banques/blast2/nr.pep Posted date: Dec 14, 2000 12:46 PM Number of letters in database: 188,266,275 Number of sequences in database: 595,510 Lambda K H 0.326 0.146 0.423 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39903240 Number of Sequences: 2977 Number of extensions: 1546425 Number of successful extensions: 5491 Number of sequences better than 1.0e-10: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 5490 Number of HSP's gapped (non-prelim): 1 length of query: 111 length of database: 189,106,746 effective HSP length: 49 effective length of query: 62 effective length of database: 159,780,883 effective search space: 9906414746 effective search space used: 9906414746 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 40 (21.6 bits) S2: 160 (66.7 bits)