BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1413 (PAB1413) DE:Hypothetical protein
(157 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75058 hypothetical protein PAB1413 - Pyrococcus abyssi (st... 331 3e-90
pir||C71089 hypothetical protein PH0976 - Pyrococcus horikoshii ... 227 5e-59
pir||D71089 hypothetical protein PH0977 - Pyrococcus horikoshii ... 181 5e-45
pir||B71133 hypothetical protein PH0830 - Pyrococcus horikoshii ... 175 2e-43
pir||D75092 hypothetical protein PAB1620 - Pyrococcus abyssi (st... 170 9e-42
pir||B75039 hypothetical protein PAB1516 - Pyrococcus abyssi (st... 164 4e-40
pir||G75100 hypothetical protein PAB1582 - Pyrococcus abyssi (st... 159 2e-38
pir||A75097 hypothetical protein PAB1598 - Pyrococcus abyssi (st... 157 9e-38
pir||F75131 hypothetical protein PAB0571 - Pyrococcus abyssi (st... 153 1e-36
pir||C71071 hypothetical protein PH1263 - Pyrococcus horikoshii ... 153 1e-36
pir||E71154 hypothetical protein PH0436 - Pyrococcus horikoshii ... 152 3e-36
pir||G69123 conserved hypothetical protein MTH196 - Methanobacte... 145 4e-34
pir||E71134 hypothetical protein PH0841 - Pyrococcus horikoshii ... 145 4e-34
gi|10954496 M. jannaschii predicted coding region MJECL04 [Metha... 143 1e-33
pir||F75049 hypothetical protein PAB2383 - Pyrococcus abyssi (st... 131 4e-30
pir||C75064 hypothetical protein PAB1371 - Pyrococcus abyssi (st... 122 3e-27
sp|Q57868|Y425_METJA HYPOTHETICAL PROTEIN MJ0425 >gi|2128315|pir... 96 2e-19
pir||B71135 hypothetical protein PH0846 - Pyrococcus horikoshii ... 95 4e-19
pir||H71134 hypothetical protein PH0844 - Pyrococcus horikoshii ... 88 7e-17
>pir||D75058 hypothetical protein PAB1413 - Pyrococcus abyssi (strain Orsay)
>gi|5458874|emb|CAB50361.1| (AJ248287) hypothetical
protein [Pyrococcus abyssi]
Length = 157
Score = 331 bits (839), Expect = 3e-90
Identities = 157/157 (100%), Positives = 157/157 (100%)
Query: 1 MINDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG 60
MINDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG
Sbjct: 1 MINDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG 60
Query: 61 FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLD 120
FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLD
Sbjct: 61 FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLD 120
Query: 121 SWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGLAH 157
SWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGLAH
Sbjct: 121 SWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGLAH 157
>pir||C71089 hypothetical protein PH0976 - Pyrococcus horikoshii
>gi|3257390|dbj|BAA30073.1| (AP000004) 471aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 471
Score = 227 bits (573), Expect = 5e-59
Identities = 98/152 (64%), Positives = 129/152 (84%)
Query: 2 INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTGF 61
I DNY AFWFRYVLPNK YLEAGL +++WERSK+DF Y+G +FE+L+R PEVF +LT F
Sbjct: 315 ITDNYLAFWFRYVLPNKSYLEAGLGKEIWERSKEDFKEYMGGVFERLLRKPEVFTKLTDF 374
Query: 62 HFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLDS 121
F+++GRWW + EE++++ALNEREKK L IEVKWK+LSKREA+GIL+DL RKA+LV LD+
Sbjct: 375 RFSRVGRWWYKNEEIDLVALNEREKKVLFIEVKWKDLSKREARGILKDLERKAKLVELDN 434
Query: 122 WKRFYGVVAKKIDDMEELREEGWLAWDLRDFE 153
W+++YG+V K ++ E+LREE +L WDL+DFE
Sbjct: 435 WEKYYGLVTKSLEGKEKLREESYLVWDLKDFE 466
>pir||D71089 hypothetical protein PH0977 - Pyrococcus horikoshii
>gi|3257391|dbj|BAA30074.1| (AP000004) 496aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 496
Score = 181 bits (454), Expect = 5e-45
Identities = 87/160 (54%), Positives = 114/160 (70%), Gaps = 7/160 (4%)
Query: 2 INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG- 60
I DNYFAFWFRYV PN +E+G E + + DD + Y G +FE + + E LRL
Sbjct: 338 IADNYFAFWFRYVYPNADLIESGNGELLVDTVMDDIDHYTGEVFEGVAK--EFLLRLNKS 395
Query: 61 ----FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAEL 116
F F+++GRWW + EE++++ALNEREKK L IEVKWK+LSKREA+GIL+DL RKA+L
Sbjct: 396 ERLPFRFSRVGRWWYKNEEIDLVALNEREKKVLFIEVKWKDLSKREARGILKDLKRKAKL 455
Query: 117 VGLDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGLA 156
VGLD W + YG+VAK + +E++EEGWLAWDL D +A
Sbjct: 456 VGLDEWGKHYGLVAKSVRGKDEIKEEGWLAWDLEDIHRMA 495
>pir||B71133 hypothetical protein PH0830 - Pyrococcus horikoshii
>gi|3257241|dbj|BAA29924.1| (AP000003) 319aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 319
Score = 175 bits (440), Expect = 2e-43
Identities = 85/155 (54%), Positives = 112/155 (71%), Gaps = 5/155 (3%)
Query: 2 INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFL---RL 58
IN+++F FWFR+V P + +E G DV E K +FN YLG +FE++ R + + +
Sbjct: 164 INEHFFNFWFRFVFPRRSEIEMGF--DVVEEIKKEFNNYLGPVFEEISRQFLIEMNKRKK 221
Query: 59 TGFHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVG 118
F FTK+GRWW +GEE++++ALNE EKKAL IEVKWK L ++EA IL+DL RKAEL G
Sbjct: 222 LPFRFTKIGRWWYKGEEIDLVALNEDEKKALFIEVKWKNLERKEAYKILKDLKRKAELTG 281
Query: 119 LDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFE 153
L W + YG++AK I + EELREEG+LAWDLRDFE
Sbjct: 282 LHDWNKAYGIIAKSIMEKEELREEGFLAWDLRDFE 316
>pir||D75092 hypothetical protein PAB1620 - Pyrococcus abyssi (strain Orsay)
>gi|5458553|emb|CAB50041.1| (AJ248286) hypothetical
protein [Pyrococcus abyssi]
Length = 243
Score = 170 bits (426), Expect = 9e-42
Identities = 79/152 (51%), Positives = 107/152 (69%), Gaps = 3/152 (1%)
Query: 4 DNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG--- 60
D YFAFWFR+V P +E+G +E E F+ YLG FE++VR + L+ G
Sbjct: 85 DLYFAFWFRFVAPYFEEIESGFSEGALEDFNAGFSQYLGGAFEEIVRQFLIELKEMGKLP 144
Query: 61 FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLD 120
FHFTK+GRWW +GEE++++ALNEREKK LL+EVKWKEL REA+ ILRDL RKA+ + L+
Sbjct: 145 FHFTKIGRWWHKGEEIDIVALNEREKKVLLVEVKWKELRDREARDILRDLERKAKFMNLN 204
Query: 121 SWKRFYGVVAKKIDDMEELREEGWLAWDLRDF 152
W++ Y +VAK+++ +L+ EGW WDL DF
Sbjct: 205 GWEKSYRLVAKRVEGKRDLKREGWFIWDLEDF 236
>pir||B75039 hypothetical protein PAB1516 - Pyrococcus abyssi (strain Orsay)
>gi|5458720|emb|CAB50207.1| (AJ248287) hypothetical
protein [Pyrococcus abyssi]
Length = 469
Score = 164 bits (412), Expect = 4e-40
Identities = 77/155 (49%), Positives = 106/155 (67%), Gaps = 3/155 (1%)
Query: 2 INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTGF 61
IND YFAFWFRYVLPN +E G + + + +DF+ YL +FE + R V L
Sbjct: 301 INDPYFAFWFRYVLPNVDLIETGQGDLLVKIVMEDFDQYLDGVFEDVTRQFLVRLNKESL 360
Query: 62 ---HFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVG 118
F K+GRWW +GEE++++ALNE +K L +EV+WKELS+ E + +R L +KA+LVG
Sbjct: 361 LTPSFIKIGRWWHKGEEIDLVALNEHKKSVLFVEVRWKELSENETRKTIRKLMKKAQLVG 420
Query: 119 LDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFE 153
L++WK +YG+V K+I E+LR EGWL WDL+DFE
Sbjct: 421 LENWKEYYGLVGKRIRGKEKLRSEGWLVWDLKDFE 455
>pir||G75100 hypothetical protein PAB1582 - Pyrococcus abyssi (strain Orsay)
>gi|5458620|emb|CAB50108.1| (AJ248286) hypothetical
protein [Pyrococcus abyssi]
Length = 462
Score = 159 bits (397), Expect = 2e-38
Identities = 75/158 (47%), Positives = 108/158 (67%), Gaps = 3/158 (1%)
Query: 1 MINDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG 60
+I D YF F+ R+V P+ +++ E +FN YLG FEK+ R + + G
Sbjct: 299 VIEDEYFRFYHRFVSPHYEEIDSLNPEPAIRDFLRNFNTYLGKTFEKVAREFLIEVNKHG 358
Query: 61 ---FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELV 117
F F ++G+WW+R EE+++LALN EKK LL+EVKWKEL ++EA+G+L+DL RK ELV
Sbjct: 359 GLPFKFMEIGKWWQRSEEIDLLALNRGEKKVLLVEVKWKELGEKEARGVLKDLERKGELV 418
Query: 118 GLDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGL 155
GL++W+++YG++AK I E L+ EGWL WDL+DFE L
Sbjct: 419 GLENWQKYYGLIAKGIKCKELLKSEGWLLWDLKDFENL 456
>pir||A75097 hypothetical protein PAB1598 - Pyrococcus abyssi (strain Orsay)
>gi|5458590|emb|CAB50078.1| (AJ248286) hypothetical
protein [Pyrococcus abyssi]
Length = 459
Score = 157 bits (392), Expect = 9e-38
Identities = 77/157 (49%), Positives = 104/157 (66%), Gaps = 6/157 (3%)
Query: 2 INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG- 60
I DN FAFWFR+V P + +E G DV E K +FN YLG FE + R V L G
Sbjct: 301 IRDNLFAFWFRFVYPRRSEIEMGF--DVVEEIKGEFNDYLGKAFEGIARQFLVRLNTLGR 358
Query: 61 --FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVG 118
F FTK+GRWW RGEEV+++A+NE EKKA+L+ V+WK L ++ + IL DL RK+EL+G
Sbjct: 359 LPFRFTKIGRWWHRGEEVDIVAINESEKKAMLVNVEWKNLDGKDVRRILGDLRRKSELIG 418
Query: 119 LDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGL 155
L+ W++ Y +VA+ + E+L + + WDLRDFE L
Sbjct: 419 LEGWEKHYAIVARDVQGKEDLEDNSHI-WDLRDFEEL 454
>pir||F75131 hypothetical protein PAB0571 - Pyrococcus abyssi (strain Orsay)
>gi|5458278|emb|CAB49767.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 451
Score = 153 bits (383), Expect = 1e-36
Identities = 70/149 (46%), Positives = 102/149 (67%), Gaps = 5/149 (3%)
Query: 4 DNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTGFHF 63
DN+ AFWFRY+ PN +E G E + D++ YLG +FEK+ R FL +F
Sbjct: 292 DNFLAFWFRYIYPNLSRIEEGTFSI--EEIRGDYSQYLGWVFEKVARQ---FLLKLNINF 346
Query: 64 TKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLDSWK 123
TK+GRWW + +E++++ALNER K L EVKWK+L ++EA+ ILR+L +K +L GLD W+
Sbjct: 347 TKIGRWWHKDKEIDIVALNERGKGVLFAEVKWKKLKEKEAEKILRELEKKGKLTGLDDWE 406
Query: 124 RFYGVVAKKIDDMEELREEGWLAWDLRDF 152
+ YG++A+ I+ E L+ +G+L WDLRDF
Sbjct: 407 KSYGLIARNIEGKENLKGKGYLVWDLRDF 435
>pir||C71071 hypothetical protein PH1263 - Pyrococcus horikoshii
>gi|3257682|dbj|BAA30365.1| (AP000005) 320aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 320
Score = 153 bits (382), Expect = 1e-36
Identities = 71/153 (46%), Positives = 105/153 (68%), Gaps = 5/153 (3%)
Query: 4 DNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG--- 60
DN+ AFWFR++ PN +E G+ + K ++ YLG +FEK+ R + L
Sbjct: 159 DNFLAFWFRFIYPNLSRIEEGIFNV--DEIKGEYPRYLGWVFEKIARQFLIELNKINKLP 216
Query: 61 FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLD 120
F F K+GRWW + EE++++ALNEREKK LL+EVKWK L +REA+ IL L +K++L+GL+
Sbjct: 217 FKFEKIGRWWYKEEEIDIVALNEREKKGLLVEVKWKTLKEREAREILEVLNKKSKLLGLE 276
Query: 121 SWKRFYGVVAKKIDDMEELREEGWLAWDLRDFE 153
W+++YG++A++I E L E+G+L WDL DFE
Sbjct: 277 GWEKYYGLIAREIKRKEPLIEDGYLVWDLEDFE 309
>pir||E71154 hypothetical protein PH0436 - Pyrococcus horikoshii
>gi|3256839|dbj|BAA29522.1| (AP000002) 452aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 452
Score = 152 bits (379), Expect = 3e-36
Identities = 73/155 (47%), Positives = 105/155 (67%), Gaps = 4/155 (2%)
Query: 1 MINDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG 60
+I D YF F++R+V P +E+ E E + +FN YLG FEK+ + FL G
Sbjct: 299 VIEDEYFRFYYRFVNPYYEEIESLNPEPAIEDFRKNFNSYLGETFEKVSKE---FLLAIG 355
Query: 61 FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLD 120
+ K+G+WW +GEE++++ALNEREKKAL +EVKW+ L +REAK IL+ L +K+ L+ LD
Sbjct: 356 -DYPKIGKWWYKGEEIDLVALNEREKKALFVEVKWRGLKEREAKRILKRLEKKSMLINLD 414
Query: 121 SWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGL 155
W + YGV+A++++ E LR+EGWL WDL DF L
Sbjct: 415 GWIKDYGVIARRVEGKESLRDEGWLVWDLEDFNSL 449
>pir||G69123 conserved hypothetical protein MTH196 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621241|gb|AAB84702.1| (AE000807) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 458
Score = 145 bits (361), Expect = 4e-34
Identities = 71/158 (44%), Positives = 106/158 (66%), Gaps = 9/158 (5%)
Query: 2 INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG- 60
I DNYFAFWFRY+ PN ++E+ +++ E DD YLG IFE + FL L
Sbjct: 301 IKDNYFAFWFRYIHPNIDFIESERRKELLELIIDDLPNYLGGIFENVAIE---FLPLISN 357
Query: 61 ---FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELV 117
F K+GRWW + EE++++A NE+E+KA+LIEVKWK L+K EA IL+DL RK++++
Sbjct: 358 KLPFKPLKIGRWWHKNEEIDLVAFNEKEEKAILIEVKWKTLNKIEANKILKDLNRKSKIL 417
Query: 118 GLDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGL 155
+ W++++G++AK++ D E+++ G L WDL D E L
Sbjct: 418 KMKEWEQYHGIIAKRVKDKEKIK--GGLIWDLEDIENL 453
>pir||E71134 hypothetical protein PH0841 - Pyrococcus horikoshii
>gi|3257252|dbj|BAA29935.1| (AP000003) 323aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 323
Score = 145 bits (361), Expect = 4e-34
Identities = 73/157 (46%), Positives = 99/157 (62%), Gaps = 5/157 (3%)
Query: 2 INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG- 60
I+D WF + PN+ +E G ER + FE + R V + G
Sbjct: 164 ISDPMLMSWFSLIYPNRTEIELGTI--TLERVEKILQRIFSFRFEDVSREFLVEMNKAGK 221
Query: 61 --FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVG 118
F FTK+GRWW +GEE++++ALNE E+KAL IEVKWK+L +RE KGIL+DL +KA LVG
Sbjct: 222 LPFRFTKIGRWWYKGEEIDLVALNEDEEKALFIEVKWKDLKEREVKGILKDLEKKAGLVG 281
Query: 119 LDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGL 155
LD W + YG++ K I+ E+LREE +L WDL+DF+ L
Sbjct: 282 LDGWDKNYGLIEKSIERKEKLREENYLVWDLKDFDAL 318
>gi|10954496 M. jannaschii predicted coding region MJECL04 [Methanococcus
jannaschii] >gi|2496210|sp|Q60260|YZ04_METJA
HYPOTHETICAL PROTEIN MJECL04 >gi|2129021|pir||D64510
hypothetical protein MJECL04 - Methanococcus jannaschii
plasmid pURB800 >gi|1500652|gb|AAC37078.1| (L77118) M.
jannaschii predicted coding region MJECL04
[Methanococcus jannaschii]
Length = 439
Score = 143 bits (356), Expect = 1e-33
Identities = 71/154 (46%), Positives = 101/154 (65%), Gaps = 8/154 (5%)
Query: 2 INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG- 60
I DN+ AF+FRY+ PN +E G+ + E K D+N YLG +FEK+ + + L
Sbjct: 290 IKDNFIAFYFRYIFPNLSAIEEGIFDI--EEIKADYNQYLGFVFEKVAKEFLIELNKMNK 347
Query: 61 --FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVG 118
F F K+GRWW RGEE++++ALN+ +KKAL +EVKWK+L R+ K I RDL RK++LVG
Sbjct: 348 LPFKFLKIGRWWHRGEEIDLIALNDNDKKALFVEVKWKDLKDRDVKKIYRDLYRKSKLVG 407
Query: 119 LDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDF 152
LD ++++Y +V KKI+ E L +DL DF
Sbjct: 408 LDDYEKYYAIVGKKIESKE---NGDCLLFDLEDF 438
>pir||F75049 hypothetical protein PAB2383 - Pyrococcus abyssi (strain Orsay)
>gi|5458804|emb|CAB50291.1| (AJ248287) hypothetical
protein [Pyrococcus abyssi]
Length = 459
Score = 131 bits (327), Expect = 4e-30
Identities = 67/155 (43%), Positives = 95/155 (61%), Gaps = 5/155 (3%)
Query: 2 INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG- 60
+ D WF V N+ +E G+ ++ K+D G+ FE + R V L G
Sbjct: 299 LKDPMLLTWFSIVPKNRTGIELGIIS--YDDVKEDIQRIYGIRFEDVAREFLVELNRRGR 356
Query: 61 --FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVG 118
F FT++GRWW +GEE++++A+NER K+ LL EVKWKELSKREAKGIL+DL RK +L+
Sbjct: 357 LPFRFTRIGRWWYKGEEIDIVAVNERLKRILLAEVKWKELSKREAKGILKDLKRKFKLMN 416
Query: 119 LDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFE 153
L+ W + +VAK + +LRE G+ WDL D +
Sbjct: 417 LEGWDASFALVAKNVHGKSKLREYGFNVWDLEDLK 451
>pir||C75064 hypothetical protein PAB1371 - Pyrococcus abyssi (strain Orsay)
>gi|5458921|emb|CAB50408.1| (AJ248287) hypothetical
protein [Pyrococcus abyssi]
Length = 472
Score = 122 bits (302), Expect = 3e-27
Identities = 66/152 (43%), Positives = 96/152 (62%), Gaps = 8/152 (5%)
Query: 2 INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLT-- 59
I D +F FWFR+V N YLE G V +++F ++G +E++ R F+R
Sbjct: 318 IRDEFFNFWFRFVYHNIQYLEEGEITKVLNDLRENFPAFVGKEYERIGRE---FIRRIDL 374
Query: 60 GFHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGL 119
GF ++GRWW +GEE++V+A NE +K L EVKW +LSK AK +LRDL RK ELV L
Sbjct: 375 GFSPLRVGRWWHKGEEIDVIAYNE--EKVALFEVKWSDLSKARAKRLLRDLERKGELVPL 432
Query: 120 DSWKRFYGVVAKKIDDMEELREEGWLAWDLRD 151
+R YG+++++++ EELR G+L +DL D
Sbjct: 433 RG-ERVYGLISREVEGKEELRNCGYLVFDLND 463
>sp|Q57868|Y425_METJA HYPOTHETICAL PROTEIN MJ0425 >gi|2128315|pir||A64353 hypothetical
protein MJ0425 - Methanococcus jannaschii
>gi|1591128|gb|AAB98412.1| (U67494) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 140
Score = 96.3 bits (236), Expect = 2e-19
Identities = 59/142 (41%), Positives = 81/142 (56%), Gaps = 9/142 (6%)
Query: 14 VLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTGFHFTKLGRWWRRG 73
V PN LE G ++V+ + N Y G +FE LV + L++ F + +WW +G
Sbjct: 5 VYPNMADLEIGNVKEVYNKILASLNEYYGKMFENLVFEM-LKLKIIDFGQKSVAKWWHKG 63
Query: 74 EEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLDSWKRFYGVVAKKI 133
EE++VLA N K + EVKWK+LS +EAKGILRDL RK + V D K Y ++AK I
Sbjct: 64 EEIDVLAYNNN--KMIAFEVKWKDLSFKEAKGILRDLERKLDKVDFDGEKECY-IIAKSI 120
Query: 134 DDMEELREEGWLAWDLRDFEGL 155
+ E+L+ A DL D E L
Sbjct: 121 EGKEKLK-----ALDLMDLEKL 137
>pir||B71135 hypothetical protein PH0846 - Pyrococcus horikoshii
>gi|3257257|dbj|BAA29940.1| (AP000003) 456aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 456
Score = 95.2 bits (233), Expect = 4e-19
Identities = 60/157 (38%), Positives = 84/157 (53%), Gaps = 17/157 (10%)
Query: 2 INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTGF 61
I D WF P + +G A+ D + FE+L + E
Sbjct: 298 IKDPMLLTWFTLTYPQMAEISSGTAK------LDSLYKVYSIRFEELAK--EFLTLFRPI 349
Query: 62 HFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAE-LVGLD 120
F LGRWW RGEE++++AL R+ K LIEVKWK+LSKR A +LR+L K+E L ++
Sbjct: 350 EFETLGRWWYRGEEIDIVAL--RKDKTTLIEVKWKDLSKRSALRVLRELEEKSEKLHPIE 407
Query: 121 SWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGLAH 157
+ G++AK + E+LREEG+L WDL D +AH
Sbjct: 408 N----IGLIAKSVRGKEKLREEGYLVWDLEDI--IAH 438
>pir||H71134 hypothetical protein PH0844 - Pyrococcus horikoshii
>gi|3257255|dbj|BAA29938.1| (AP000003) 103aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 103
Score = 87.8 bits (214), Expect = 7e-17
Identities = 44/103 (42%), Positives = 63/103 (60%), Gaps = 6/103 (5%)
Query: 2 INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTGF 61
I DNY+AFWFR+V PN+ +E L ++ E K D+N Y+G +FEK + F
Sbjct: 5 IADNYYAFWFRFVYPNRKLVERELYKEALELVKRDYNHYMGRVFEK----ASLDFLWKRF 60
Query: 62 HFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAK 104
F + GRWW R EE++V+ + + A EVKWK+LS+REA+
Sbjct: 61 AFERAGRWWSREEEIDVVGV--KRGMAYFFEVKWKDLSEREAR 101
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.323 0.143 0.454
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63650330
Number of Sequences: 2977
Number of extensions: 2576202
Number of successful extensions: 5893
Number of sequences better than 1.0e-10: 19
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5849
Number of HSP's gapped (non-prelim): 19
length of query: 157
length of database: 189,106,746
effective HSP length: 47
effective length of query: 110
effective length of database: 160,977,857
effective search space: 17707564270
effective search space used: 17707564270
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 162 (67.5 bits)