BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1413 (PAB1413) DE:Hypothetical protein
         (157 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||D75058 hypothetical protein PAB1413 - Pyrococcus abyssi (st...   331  3e-90
pir||C71089 hypothetical protein PH0976 - Pyrococcus horikoshii ...   227  5e-59
pir||D71089 hypothetical protein PH0977 - Pyrococcus horikoshii ...   181  5e-45
pir||B71133 hypothetical protein PH0830 - Pyrococcus horikoshii ...   175  2e-43
pir||D75092 hypothetical protein PAB1620 - Pyrococcus abyssi (st...   170  9e-42
pir||B75039 hypothetical protein PAB1516 - Pyrococcus abyssi (st...   164  4e-40
pir||G75100 hypothetical protein PAB1582 - Pyrococcus abyssi (st...   159  2e-38
pir||A75097 hypothetical protein PAB1598 - Pyrococcus abyssi (st...   157  9e-38
pir||F75131 hypothetical protein PAB0571 - Pyrococcus abyssi (st...   153  1e-36
pir||C71071 hypothetical protein PH1263 - Pyrococcus horikoshii ...   153  1e-36
pir||E71154 hypothetical protein PH0436 - Pyrococcus horikoshii ...   152  3e-36
pir||G69123 conserved hypothetical protein MTH196 - Methanobacte...   145  4e-34
pir||E71134 hypothetical protein PH0841 - Pyrococcus horikoshii ...   145  4e-34
gi|10954496 M. jannaschii predicted coding region MJECL04 [Metha...   143  1e-33
pir||F75049 hypothetical protein PAB2383 - Pyrococcus abyssi (st...   131  4e-30
pir||C75064 hypothetical protein PAB1371 - Pyrococcus abyssi (st...   122  3e-27
sp|Q57868|Y425_METJA HYPOTHETICAL PROTEIN MJ0425 >gi|2128315|pir...    96  2e-19
pir||B71135 hypothetical protein PH0846 - Pyrococcus horikoshii ...    95  4e-19
pir||H71134 hypothetical protein PH0844 - Pyrococcus horikoshii ...    88  7e-17

>pir||D75058 hypothetical protein PAB1413 - Pyrococcus abyssi (strain Orsay)
           >gi|5458874|emb|CAB50361.1| (AJ248287) hypothetical
           protein [Pyrococcus abyssi]
           Length = 157
           
 Score =  331 bits (839), Expect = 3e-90
 Identities = 157/157 (100%), Positives = 157/157 (100%)

Query: 1   MINDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG 60
           MINDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG
Sbjct: 1   MINDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG 60

Query: 61  FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLD 120
           FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLD
Sbjct: 61  FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLD 120

Query: 121 SWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGLAH 157
           SWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGLAH
Sbjct: 121 SWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGLAH 157


>pir||C71089 hypothetical protein PH0976 - Pyrococcus horikoshii
           >gi|3257390|dbj|BAA30073.1| (AP000004) 471aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 471
           
 Score =  227 bits (573), Expect = 5e-59
 Identities = 98/152 (64%), Positives = 129/152 (84%)

Query: 2   INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTGF 61
           I DNY AFWFRYVLPNK YLEAGL +++WERSK+DF  Y+G +FE+L+R PEVF +LT F
Sbjct: 315 ITDNYLAFWFRYVLPNKSYLEAGLGKEIWERSKEDFKEYMGGVFERLLRKPEVFTKLTDF 374

Query: 62  HFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLDS 121
            F+++GRWW + EE++++ALNEREKK L IEVKWK+LSKREA+GIL+DL RKA+LV LD+
Sbjct: 375 RFSRVGRWWYKNEEIDLVALNEREKKVLFIEVKWKDLSKREARGILKDLERKAKLVELDN 434

Query: 122 WKRFYGVVAKKIDDMEELREEGWLAWDLRDFE 153
           W+++YG+V K ++  E+LREE +L WDL+DFE
Sbjct: 435 WEKYYGLVTKSLEGKEKLREESYLVWDLKDFE 466


>pir||D71089 hypothetical protein PH0977 - Pyrococcus horikoshii
           >gi|3257391|dbj|BAA30074.1| (AP000004) 496aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 496
           
 Score =  181 bits (454), Expect = 5e-45
 Identities = 87/160 (54%), Positives = 114/160 (70%), Gaps = 7/160 (4%)

Query: 2   INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG- 60
           I DNYFAFWFRYV PN   +E+G  E + +   DD + Y G +FE + +  E  LRL   
Sbjct: 338 IADNYFAFWFRYVYPNADLIESGNGELLVDTVMDDIDHYTGEVFEGVAK--EFLLRLNKS 395

Query: 61  ----FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAEL 116
               F F+++GRWW + EE++++ALNEREKK L IEVKWK+LSKREA+GIL+DL RKA+L
Sbjct: 396 ERLPFRFSRVGRWWYKNEEIDLVALNEREKKVLFIEVKWKDLSKREARGILKDLKRKAKL 455

Query: 117 VGLDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGLA 156
           VGLD W + YG+VAK +   +E++EEGWLAWDL D   +A
Sbjct: 456 VGLDEWGKHYGLVAKSVRGKDEIKEEGWLAWDLEDIHRMA 495


>pir||B71133 hypothetical protein PH0830 - Pyrococcus horikoshii
           >gi|3257241|dbj|BAA29924.1| (AP000003) 319aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 319
           
 Score =  175 bits (440), Expect = 2e-43
 Identities = 85/155 (54%), Positives = 112/155 (71%), Gaps = 5/155 (3%)

Query: 2   INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFL---RL 58
           IN+++F FWFR+V P +  +E G   DV E  K +FN YLG +FE++ R   + +   + 
Sbjct: 164 INEHFFNFWFRFVFPRRSEIEMGF--DVVEEIKKEFNNYLGPVFEEISRQFLIEMNKRKK 221

Query: 59  TGFHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVG 118
             F FTK+GRWW +GEE++++ALNE EKKAL IEVKWK L ++EA  IL+DL RKAEL G
Sbjct: 222 LPFRFTKIGRWWYKGEEIDLVALNEDEKKALFIEVKWKNLERKEAYKILKDLKRKAELTG 281

Query: 119 LDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFE 153
           L  W + YG++AK I + EELREEG+LAWDLRDFE
Sbjct: 282 LHDWNKAYGIIAKSIMEKEELREEGFLAWDLRDFE 316


>pir||D75092 hypothetical protein PAB1620 - Pyrococcus abyssi (strain Orsay)
           >gi|5458553|emb|CAB50041.1| (AJ248286) hypothetical
           protein [Pyrococcus abyssi]
           Length = 243
           
 Score =  170 bits (426), Expect = 9e-42
 Identities = 79/152 (51%), Positives = 107/152 (69%), Gaps = 3/152 (1%)

Query: 4   DNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG--- 60
           D YFAFWFR+V P    +E+G +E   E     F+ YLG  FE++VR   + L+  G   
Sbjct: 85  DLYFAFWFRFVAPYFEEIESGFSEGALEDFNAGFSQYLGGAFEEIVRQFLIELKEMGKLP 144

Query: 61  FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLD 120
           FHFTK+GRWW +GEE++++ALNEREKK LL+EVKWKEL  REA+ ILRDL RKA+ + L+
Sbjct: 145 FHFTKIGRWWHKGEEIDIVALNEREKKVLLVEVKWKELRDREARDILRDLERKAKFMNLN 204

Query: 121 SWKRFYGVVAKKIDDMEELREEGWLAWDLRDF 152
            W++ Y +VAK+++   +L+ EGW  WDL DF
Sbjct: 205 GWEKSYRLVAKRVEGKRDLKREGWFIWDLEDF 236


>pir||B75039 hypothetical protein PAB1516 - Pyrococcus abyssi (strain Orsay)
           >gi|5458720|emb|CAB50207.1| (AJ248287) hypothetical
           protein [Pyrococcus abyssi]
           Length = 469
           
 Score =  164 bits (412), Expect = 4e-40
 Identities = 77/155 (49%), Positives = 106/155 (67%), Gaps = 3/155 (1%)

Query: 2   INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTGF 61
           IND YFAFWFRYVLPN   +E G  + + +   +DF+ YL  +FE + R   V L     
Sbjct: 301 INDPYFAFWFRYVLPNVDLIETGQGDLLVKIVMEDFDQYLDGVFEDVTRQFLVRLNKESL 360

Query: 62  ---HFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVG 118
               F K+GRWW +GEE++++ALNE +K  L +EV+WKELS+ E +  +R L +KA+LVG
Sbjct: 361 LTPSFIKIGRWWHKGEEIDLVALNEHKKSVLFVEVRWKELSENETRKTIRKLMKKAQLVG 420

Query: 119 LDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFE 153
           L++WK +YG+V K+I   E+LR EGWL WDL+DFE
Sbjct: 421 LENWKEYYGLVGKRIRGKEKLRSEGWLVWDLKDFE 455


>pir||G75100 hypothetical protein PAB1582 - Pyrococcus abyssi (strain Orsay)
           >gi|5458620|emb|CAB50108.1| (AJ248286) hypothetical
           protein [Pyrococcus abyssi]
           Length = 462
           
 Score =  159 bits (397), Expect = 2e-38
 Identities = 75/158 (47%), Positives = 108/158 (67%), Gaps = 3/158 (1%)

Query: 1   MINDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG 60
           +I D YF F+ R+V P+   +++   E        +FN YLG  FEK+ R   + +   G
Sbjct: 299 VIEDEYFRFYHRFVSPHYEEIDSLNPEPAIRDFLRNFNTYLGKTFEKVAREFLIEVNKHG 358

Query: 61  ---FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELV 117
              F F ++G+WW+R EE+++LALN  EKK LL+EVKWKEL ++EA+G+L+DL RK ELV
Sbjct: 359 GLPFKFMEIGKWWQRSEEIDLLALNRGEKKVLLVEVKWKELGEKEARGVLKDLERKGELV 418

Query: 118 GLDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGL 155
           GL++W+++YG++AK I   E L+ EGWL WDL+DFE L
Sbjct: 419 GLENWQKYYGLIAKGIKCKELLKSEGWLLWDLKDFENL 456


>pir||A75097 hypothetical protein PAB1598 - Pyrococcus abyssi (strain Orsay)
           >gi|5458590|emb|CAB50078.1| (AJ248286) hypothetical
           protein [Pyrococcus abyssi]
           Length = 459
           
 Score =  157 bits (392), Expect = 9e-38
 Identities = 77/157 (49%), Positives = 104/157 (66%), Gaps = 6/157 (3%)

Query: 2   INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG- 60
           I DN FAFWFR+V P +  +E G   DV E  K +FN YLG  FE + R   V L   G 
Sbjct: 301 IRDNLFAFWFRFVYPRRSEIEMGF--DVVEEIKGEFNDYLGKAFEGIARQFLVRLNTLGR 358

Query: 61  --FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVG 118
             F FTK+GRWW RGEEV+++A+NE EKKA+L+ V+WK L  ++ + IL DL RK+EL+G
Sbjct: 359 LPFRFTKIGRWWHRGEEVDIVAINESEKKAMLVNVEWKNLDGKDVRRILGDLRRKSELIG 418

Query: 119 LDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGL 155
           L+ W++ Y +VA+ +   E+L +   + WDLRDFE L
Sbjct: 419 LEGWEKHYAIVARDVQGKEDLEDNSHI-WDLRDFEEL 454


>pir||F75131 hypothetical protein PAB0571 - Pyrococcus abyssi (strain Orsay)
           >gi|5458278|emb|CAB49767.1| (AJ248285) hypothetical
           protein [Pyrococcus abyssi]
           Length = 451
           
 Score =  153 bits (383), Expect = 1e-36
 Identities = 70/149 (46%), Positives = 102/149 (67%), Gaps = 5/149 (3%)

Query: 4   DNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTGFHF 63
           DN+ AFWFRY+ PN   +E G      E  + D++ YLG +FEK+ R    FL     +F
Sbjct: 292 DNFLAFWFRYIYPNLSRIEEGTFSI--EEIRGDYSQYLGWVFEKVARQ---FLLKLNINF 346

Query: 64  TKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLDSWK 123
           TK+GRWW + +E++++ALNER K  L  EVKWK+L ++EA+ ILR+L +K +L GLD W+
Sbjct: 347 TKIGRWWHKDKEIDIVALNERGKGVLFAEVKWKKLKEKEAEKILRELEKKGKLTGLDDWE 406

Query: 124 RFYGVVAKKIDDMEELREEGWLAWDLRDF 152
           + YG++A+ I+  E L+ +G+L WDLRDF
Sbjct: 407 KSYGLIARNIEGKENLKGKGYLVWDLRDF 435


>pir||C71071 hypothetical protein PH1263 - Pyrococcus horikoshii
           >gi|3257682|dbj|BAA30365.1| (AP000005) 320aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 320
           
 Score =  153 bits (382), Expect = 1e-36
 Identities = 71/153 (46%), Positives = 105/153 (68%), Gaps = 5/153 (3%)

Query: 4   DNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG--- 60
           DN+ AFWFR++ PN   +E G+     +  K ++  YLG +FEK+ R   + L       
Sbjct: 159 DNFLAFWFRFIYPNLSRIEEGIFNV--DEIKGEYPRYLGWVFEKIARQFLIELNKINKLP 216

Query: 61  FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLD 120
           F F K+GRWW + EE++++ALNEREKK LL+EVKWK L +REA+ IL  L +K++L+GL+
Sbjct: 217 FKFEKIGRWWYKEEEIDIVALNEREKKGLLVEVKWKTLKEREAREILEVLNKKSKLLGLE 276

Query: 121 SWKRFYGVVAKKIDDMEELREEGWLAWDLRDFE 153
            W+++YG++A++I   E L E+G+L WDL DFE
Sbjct: 277 GWEKYYGLIAREIKRKEPLIEDGYLVWDLEDFE 309


>pir||E71154 hypothetical protein PH0436 - Pyrococcus horikoshii
           >gi|3256839|dbj|BAA29522.1| (AP000002) 452aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 452
           
 Score =  152 bits (379), Expect = 3e-36
 Identities = 73/155 (47%), Positives = 105/155 (67%), Gaps = 4/155 (2%)

Query: 1   MINDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG 60
           +I D YF F++R+V P    +E+   E   E  + +FN YLG  FEK+ +    FL   G
Sbjct: 299 VIEDEYFRFYYRFVNPYYEEIESLNPEPAIEDFRKNFNSYLGETFEKVSKE---FLLAIG 355

Query: 61  FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLD 120
             + K+G+WW +GEE++++ALNEREKKAL +EVKW+ L +REAK IL+ L +K+ L+ LD
Sbjct: 356 -DYPKIGKWWYKGEEIDLVALNEREKKALFVEVKWRGLKEREAKRILKRLEKKSMLINLD 414

Query: 121 SWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGL 155
            W + YGV+A++++  E LR+EGWL WDL DF  L
Sbjct: 415 GWIKDYGVIARRVEGKESLRDEGWLVWDLEDFNSL 449


>pir||G69123 conserved hypothetical protein MTH196 - Methanobacterium
           thermoautotrophicum (strain Delta H)
           >gi|2621241|gb|AAB84702.1| (AE000807) conserved protein
           [Methanobacterium thermoautotrophicum]
           Length = 458
           
 Score =  145 bits (361), Expect = 4e-34
 Identities = 71/158 (44%), Positives = 106/158 (66%), Gaps = 9/158 (5%)

Query: 2   INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG- 60
           I DNYFAFWFRY+ PN  ++E+   +++ E   DD   YLG IFE +      FL L   
Sbjct: 301 IKDNYFAFWFRYIHPNIDFIESERRKELLELIIDDLPNYLGGIFENVAIE---FLPLISN 357

Query: 61  ---FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELV 117
              F   K+GRWW + EE++++A NE+E+KA+LIEVKWK L+K EA  IL+DL RK++++
Sbjct: 358 KLPFKPLKIGRWWHKNEEIDLVAFNEKEEKAILIEVKWKTLNKIEANKILKDLNRKSKIL 417

Query: 118 GLDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGL 155
            +  W++++G++AK++ D E+++  G L WDL D E L
Sbjct: 418 KMKEWEQYHGIIAKRVKDKEKIK--GGLIWDLEDIENL 453


>pir||E71134 hypothetical protein PH0841 - Pyrococcus horikoshii
           >gi|3257252|dbj|BAA29935.1| (AP000003) 323aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 323
           
 Score =  145 bits (361), Expect = 4e-34
 Identities = 73/157 (46%), Positives = 99/157 (62%), Gaps = 5/157 (3%)

Query: 2   INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG- 60
           I+D     WF  + PN+  +E G      ER +          FE + R   V +   G 
Sbjct: 164 ISDPMLMSWFSLIYPNRTEIELGTI--TLERVEKILQRIFSFRFEDVSREFLVEMNKAGK 221

Query: 61  --FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVG 118
             F FTK+GRWW +GEE++++ALNE E+KAL IEVKWK+L +RE KGIL+DL +KA LVG
Sbjct: 222 LPFRFTKIGRWWYKGEEIDLVALNEDEEKALFIEVKWKDLKEREVKGILKDLEKKAGLVG 281

Query: 119 LDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGL 155
           LD W + YG++ K I+  E+LREE +L WDL+DF+ L
Sbjct: 282 LDGWDKNYGLIEKSIERKEKLREENYLVWDLKDFDAL 318


>gi|10954496 M. jannaschii predicted coding region MJECL04 [Methanococcus
           jannaschii] >gi|2496210|sp|Q60260|YZ04_METJA
           HYPOTHETICAL PROTEIN MJECL04 >gi|2129021|pir||D64510
           hypothetical protein MJECL04 - Methanococcus jannaschii
           plasmid pURB800 >gi|1500652|gb|AAC37078.1| (L77118) M.
           jannaschii predicted coding region MJECL04
           [Methanococcus jannaschii]
           Length = 439
           
 Score =  143 bits (356), Expect = 1e-33
 Identities = 71/154 (46%), Positives = 101/154 (65%), Gaps = 8/154 (5%)

Query: 2   INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG- 60
           I DN+ AF+FRY+ PN   +E G+ +   E  K D+N YLG +FEK+ +   + L     
Sbjct: 290 IKDNFIAFYFRYIFPNLSAIEEGIFDI--EEIKADYNQYLGFVFEKVAKEFLIELNKMNK 347

Query: 61  --FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVG 118
             F F K+GRWW RGEE++++ALN+ +KKAL +EVKWK+L  R+ K I RDL RK++LVG
Sbjct: 348 LPFKFLKIGRWWHRGEEIDLIALNDNDKKALFVEVKWKDLKDRDVKKIYRDLYRKSKLVG 407

Query: 119 LDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDF 152
           LD ++++Y +V KKI+  E       L +DL DF
Sbjct: 408 LDDYEKYYAIVGKKIESKE---NGDCLLFDLEDF 438


>pir||F75049 hypothetical protein PAB2383 - Pyrococcus abyssi (strain Orsay)
           >gi|5458804|emb|CAB50291.1| (AJ248287) hypothetical
           protein [Pyrococcus abyssi]
           Length = 459
           
 Score =  131 bits (327), Expect = 4e-30
 Identities = 67/155 (43%), Positives = 95/155 (61%), Gaps = 5/155 (3%)

Query: 2   INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTG- 60
           + D     WF  V  N+  +E G+    ++  K+D     G+ FE + R   V L   G 
Sbjct: 299 LKDPMLLTWFSIVPKNRTGIELGIIS--YDDVKEDIQRIYGIRFEDVAREFLVELNRRGR 356

Query: 61  --FHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVG 118
             F FT++GRWW +GEE++++A+NER K+ LL EVKWKELSKREAKGIL+DL RK +L+ 
Sbjct: 357 LPFRFTRIGRWWYKGEEIDIVAVNERLKRILLAEVKWKELSKREAKGILKDLKRKFKLMN 416

Query: 119 LDSWKRFYGVVAKKIDDMEELREEGWLAWDLRDFE 153
           L+ W   + +VAK +    +LRE G+  WDL D +
Sbjct: 417 LEGWDASFALVAKNVHGKSKLREYGFNVWDLEDLK 451


>pir||C75064 hypothetical protein PAB1371 - Pyrococcus abyssi (strain Orsay)
           >gi|5458921|emb|CAB50408.1| (AJ248287) hypothetical
           protein [Pyrococcus abyssi]
           Length = 472
           
 Score =  122 bits (302), Expect = 3e-27
 Identities = 66/152 (43%), Positives = 96/152 (62%), Gaps = 8/152 (5%)

Query: 2   INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLT-- 59
           I D +F FWFR+V  N  YLE G    V    +++F  ++G  +E++ R    F+R    
Sbjct: 318 IRDEFFNFWFRFVYHNIQYLEEGEITKVLNDLRENFPAFVGKEYERIGRE---FIRRIDL 374

Query: 60  GFHFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGL 119
           GF   ++GRWW +GEE++V+A NE  +K  L EVKW +LSK  AK +LRDL RK ELV L
Sbjct: 375 GFSPLRVGRWWHKGEEIDVIAYNE--EKVALFEVKWSDLSKARAKRLLRDLERKGELVPL 432

Query: 120 DSWKRFYGVVAKKIDDMEELREEGWLAWDLRD 151
              +R YG+++++++  EELR  G+L +DL D
Sbjct: 433 RG-ERVYGLISREVEGKEELRNCGYLVFDLND 463


>sp|Q57868|Y425_METJA HYPOTHETICAL PROTEIN MJ0425 >gi|2128315|pir||A64353 hypothetical
           protein MJ0425 - Methanococcus jannaschii
           >gi|1591128|gb|AAB98412.1| (U67494) conserved
           hypothetical protein [Methanococcus jannaschii]
           Length = 140
           
 Score = 96.3 bits (236), Expect = 2e-19
 Identities = 59/142 (41%), Positives = 81/142 (56%), Gaps = 9/142 (6%)

Query: 14  VLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTGFHFTKLGRWWRRG 73
           V PN   LE G  ++V+ +     N Y G +FE LV    + L++  F    + +WW +G
Sbjct: 5   VYPNMADLEIGNVKEVYNKILASLNEYYGKMFENLVFEM-LKLKIIDFGQKSVAKWWHKG 63

Query: 74  EEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAELVGLDSWKRFYGVVAKKI 133
           EE++VLA N    K +  EVKWK+LS +EAKGILRDL RK + V  D  K  Y ++AK I
Sbjct: 64  EEIDVLAYNNN--KMIAFEVKWKDLSFKEAKGILRDLERKLDKVDFDGEKECY-IIAKSI 120

Query: 134 DDMEELREEGWLAWDLRDFEGL 155
           +  E+L+     A DL D E L
Sbjct: 121 EGKEKLK-----ALDLMDLEKL 137


>pir||B71135 hypothetical protein PH0846 - Pyrococcus horikoshii
           >gi|3257257|dbj|BAA29940.1| (AP000003) 456aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 456
           
 Score = 95.2 bits (233), Expect = 4e-19
 Identities = 60/157 (38%), Positives = 84/157 (53%), Gaps = 17/157 (10%)

Query: 2   INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTGF 61
           I D     WF    P    + +G A+       D       + FE+L +  E        
Sbjct: 298 IKDPMLLTWFTLTYPQMAEISSGTAK------LDSLYKVYSIRFEELAK--EFLTLFRPI 349

Query: 62  HFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAKGILRDLGRKAE-LVGLD 120
            F  LGRWW RGEE++++AL  R+ K  LIEVKWK+LSKR A  +LR+L  K+E L  ++
Sbjct: 350 EFETLGRWWYRGEEIDIVAL--RKDKTTLIEVKWKDLSKRSALRVLRELEEKSEKLHPIE 407

Query: 121 SWKRFYGVVAKKIDDMEELREEGWLAWDLRDFEGLAH 157
           +     G++AK +   E+LREEG+L WDL D   +AH
Sbjct: 408 N----IGLIAKSVRGKEKLREEGYLVWDLEDI--IAH 438


>pir||H71134 hypothetical protein PH0844 - Pyrococcus horikoshii
           >gi|3257255|dbj|BAA29938.1| (AP000003) 103aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 103
           
 Score = 87.8 bits (214), Expect = 7e-17
 Identities = 44/103 (42%), Positives = 63/103 (60%), Gaps = 6/103 (5%)

Query: 2   INDNYFAFWFRYVLPNKVYLEAGLAEDVWERSKDDFNIYLGLIFEKLVRNPEVFLRLTGF 61
           I DNY+AFWFR+V PN+  +E  L ++  E  K D+N Y+G +FEK      +      F
Sbjct: 5   IADNYYAFWFRFVYPNRKLVERELYKEALELVKRDYNHYMGRVFEK----ASLDFLWKRF 60

Query: 62  HFTKLGRWWRRGEEVNVLALNEREKKALLIEVKWKELSKREAK 104
            F + GRWW R EE++V+ +  +   A   EVKWK+LS+REA+
Sbjct: 61  AFERAGRWWSREEEIDVVGV--KRGMAYFFEVKWKDLSEREAR 101


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.323    0.143    0.454 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63650330
Number of Sequences: 2977
Number of extensions: 2576202
Number of successful extensions: 5893
Number of sequences better than 1.0e-10: 19
Number of HSP's better than  0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5849
Number of HSP's gapped (non-prelim): 19
length of query: 157
length of database: 189,106,746
effective HSP length: 47
effective length of query: 110
effective length of database: 160,977,857
effective search space: 17707564270
effective search space used: 17707564270
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 162 (67.5 bits)