BLASTP 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= PAB1431 (PAB1431) DE:Hypothetical protein (442 letters) Database: ./suso.pep; /banques/blast2/nr.pep 598,487 sequences; 189,106,746 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||F75054 hypothetical protein PAB1431 - Pyrococcus abyssi (st... 872 0.0 pir||H71106 hypothetical protein PH0625 - Pyrococcus horikoshii ... 813 0.0 pir||A75021 succinyl-coa synthetase alpha chain related protein ... 369 e-101 pir||G71124 hypothetical protein PH0766 - Pyrococcus horikoshii ... 365 e-100 pir||D75038 hypothetical protein PAB0854 - Pyrococcus abyssi (st... 365 e-100 pir||H71207 hypothetical protein PH1928 - Pyrococcus horikoshii ... 364 1e-99 gi|11498810 conserved hypothetical protein [Archaeoglobus fulgid... 346 2e-94 sp|Q58010|Y590_METJA HYPOTHETICAL PROTEIN MJ0590 >gi|2128020|pir... 339 3e-92 pir||A71028 hypothetical protein PH1517 - Pyrococcus horikoshii ... 336 3e-91 pir||D75106 hypothetical protein PAB1937 - Pyrococcus abyssi (st... 335 5e-91 pir||T48661 acetate--CoA ligase (ADP-forming) (EC 6.2.1.13) alph... 335 8e-91 pir||E71189 hypothetical protein PH1789 - Pyrococcus horikoshii ... 331 9e-90 pir||E75149 succinyl-coa synthetase alpha chain related protein ... 326 4e-88 emb|CAC12278.1| (AL445066) probable acetyl-CoA synthetase [Therm... 284 1e-75 gb|AAF88064.1|AF286346_1 (AF286346) acetyl-CoA synthetase [Entam... 279 6e-74 gb|AAK42002.1| Conserved hypothetical protein [Sulfolobus solfat... 269 5e-71 gb|AAD44021.1|AF107206_1 (AF107206) acetyl-CoA synthetase [Giard... 265 1e-69 pir||T35770 hypothetical protein SC8A6.03c SC8A6.03c - Streptomy... 255 6e-67 gi|11499522 conserved hypothetical protein [Archaeoglobus fulgid... 252 7e-66 gi|11498792 conserved hypothetical protein [Archaeoglobus fulgid... 249 5e-65 pir||C82443 conserved hypothetical protein VCA0574 [imported] - ... 244 1e-63 gi|11498537 conserved hypothetical protein [Archaeoglobus fulgid... 243 3e-63 gi|11499106 conserved hypothetical protein [Archaeoglobus fulgid... 241 1e-62 gb|AAG19369.1| (AE005031) acetyl-CoA synthetase; Acs3 [Halobacte... 221 1e-56 dbj|BAA10925.1| (D64044) hypothetycal 67KD protein fragment in U... 201 1e-50 sp|P76594|YFIQ_ECOLI HYPOTHETICAL 98.0 KD PROTEIN IN UNG-PSSA IN... 201 1e-50 emb|CAA10043.1| (AJ012480) pimeloyl-CoA synthetase [Pseudomonas ... 173 5e-42 pir||B83518 pimeloyl-CoA synthetase PA1017 [imported] - Pseudomo... 169 5e-41 pir||T35878 hypothetical protein SC9B10.09 - Streptomyces coelic... 136 5e-31 pir||H83024 hypothetical protein PA4978 [imported] - Pseudomonas... 107 3e-22 >pir||F75054 hypothetical protein PAB1431 - Pyrococcus abyssi (strain Orsay) >gi|5458844|emb|CAB50331.1| (AJ248287) hypothetical protein [Pyrococcus abyssi] Length = 442 Score = 872 bits (2228), Expect = 0.0 Identities = 442/442 (100%), Positives = 442/442 (100%) Query: 1 MDYFFYPKSVAIFGSFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRKR 60 MDYFFYPKSVAIFGSFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRKR Sbjct: 1 MDYFFYPKSVAIFGSFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRKR 60 Query: 61 LEEEVDVSIVVIPAKLVPGLIRELKGLTKGAVVISAGFSEVGNVDLEEELIKAAKEAGIR 120 LEEEVDVSIVVIPAKLVPGLIRELKGLTKGAVVISAGFSEVGNVDLEEELIKAAKEAGIR Sbjct: 61 LEEEVDVSIVVIPAKLVPGLIRELKGLTKGAVVISAGFSEVGNVDLEEELIKAAKEAGIR 120 Query: 121 IIGPNCAGIFGVHGKFFGSFEVRVNPGGLALISQSGAFGGAALAMGNEENVGFSAFVSYG 180 IIGPNCAGIFGVHGKFFGSFEVRVNPGGLALISQSGAFGGAALAMGNEENVGFSAFVSYG Sbjct: 121 IIGPNCAGIFGVHGKFFGSFEVRVNPGGLALISQSGAFGGAALAMGNEENVGFSAFVSYG 180 Query: 181 NAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAGKSESG 240 NAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAGKSESG Sbjct: 181 NAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAGKSESG 240 Query: 241 AKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQSAGSRVAVITNSG 300 AKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQSAGSRVAVITNSG Sbjct: 241 AKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQSAGSRVAVITNSG 300 Query: 301 GPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYRRTIEVV 360 GPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYRRTIEVV Sbjct: 301 GPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYRRTIEVV 360 Query: 361 CQDENVDSLLVICVPPIFIPSEEIARAIIEAKCNKPIIVNFMAGELVKKGVELLNAHGIK 420 CQDENVDSLLVICVPPIFIPSEEIARAIIEAKCNKPIIVNFMAGELVKKGVELLNAHGIK Sbjct: 361 CQDENVDSLLVICVPPIFIPSEEIARAIIEAKCNKPIIVNFMAGELVKKGVELLNAHGIK 420 Query: 421 NFPTPERAAKALYWLSKRKNQG 442 NFPTPERAAKALYWLSKRKNQG Sbjct: 421 NFPTPERAAKALYWLSKRKNQG 442 >pir||H71106 hypothetical protein PH0625 - Pyrococcus horikoshii >gi|3257031|dbj|BAA29714.1| (AP000003) 440aa long hypothetical protein [Pyrococcus horikoshii] Length = 440 Score = 813 bits (2076), Expect = 0.0 Identities = 406/440 (92%), Positives = 429/440 (97%) Query: 1 MDYFFYPKSVAIFGSFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRKR 60 MDYFFYPKSVAIFGSFR+G+IAREILRNIVEGGFEGKIIPVNPKGG VEV+GRRF I+++ Sbjct: 1 MDYFFYPKSVAIFGSFRKGSIAREILRNIVEGGFEGKIIPVNPKGGEVEVSGRRFIIKRK 60 Query: 61 LEEEVDVSIVVIPAKLVPGLIRELKGLTKGAVVISAGFSEVGNVDLEEELIKAAKEAGIR 120 L+E VDVSI+VIPAKLVPGLIRELKGLTKGAVVISAGFSEVGNV+LEEELI+AAKE+GIR Sbjct: 61 LDEFVDVSIIVIPAKLVPGLIRELKGLTKGAVVISAGFSEVGNVELEEELIRAAKESGIR 120 Query: 121 IIGPNCAGIFGVHGKFFGSFEVRVNPGGLALISQSGAFGGAALAMGNEENVGFSAFVSYG 180 IIGPNCAGIFGVHGKFFGSFEVRVNPGGLALISQSGAFGGAALAMGNEENVGFSAFVSYG Sbjct: 121 IIGPNCAGIFGVHGKFFGSFEVRVNPGGLALISQSGAFGGAALAMGNEENVGFSAFVSYG 180 Query: 181 NAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAGKSESG 240 NAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAGKS+SG Sbjct: 181 NAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAGKSKSG 240 Query: 241 AKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQSAGSRVAVITNSG 300 AKAAQSHTGSLAGSYEIY+A FKQ NAIEVEEMEELFDAAKAFEMY+ AGSRVAVITNSG Sbjct: 241 AKAAQSHTGSLAGSYEIYQAAFKQANAIEVEEMEELFDAAKAFEMYKEAGSRVAVITNSG 300 Query: 301 GPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYRRTIEVV 360 GPGVLATDKLEKLGLEIA+LSE+TV KLREFLPPQCST+NPIDLIADADYERY+RTIE+V Sbjct: 301 GPGVLATDKLEKLGLEIAQLSEDTVKKLREFLPPQCSTKNPIDLIADADYERYKRTIEIV 360 Query: 361 CQDENVDSLLVICVPPIFIPSEEIARAIIEAKCNKPIIVNFMAGELVKKGVELLNAHGIK 420 CQDENVDSLLVICVPPIFIPSEEIARAIIEAKC+KPIIVNFM+GELV GV+LLN H IK Sbjct: 361 CQDENVDSLLVICVPPIFIPSEEIARAIIEAKCDKPIIVNFMSGELVANGVKLLNDHDIK 420 Query: 421 NFPTPERAAKALYWLSKRKN 440 NFPTPERAAKALYWLSKRK+ Sbjct: 421 NFPTPERAAKALYWLSKRKS 440 >pir||A75021 succinyl-coa synthetase alpha chain related protein PAB1230 - Pyrococcus abyssi (strain Orsay) >gi|5459121|emb|CAB50607.1| (AJ248288) SUCCINYL-COA SYNTHETASE ALPHA SUBUNIT RELATED PROTEIN [Pyrococcus abyssi] Length = 466 Score = 369 bits (936), Expect = e-101 Identities = 214/457 (46%), Positives = 280/457 (60%), Gaps = 28/457 (6%) Query: 1 MDYFFYPKSVAIFG-SFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRK 59 +D+ FYP+SVA+ G S G + ILR++V G F GKI VN KGG +EV G++F++ + Sbjct: 6 LDFLFYPRSVAVIGASHVPGKVGNAILRSLVNG-FNGKIYAVNVKGGEIEVNGKKFKVYR 64 Query: 60 RLEE---EVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVDLEEELIKAA 114 ++E EVDV+++ +PAK VP +I E KG+ KG VVISAGF E G DLEEEL+K A Sbjct: 65 SVKEIPDEVDVAVIAVPAKFVPDVIDECGEKGV-KGVVVISAGFKEAGRADLEEELVKRA 123 Query: 115 KEAGIRIIGPNCAGIFGVHGKFFGSF-----EVRVNPGGLALISQSGAFGGAALAMGNEE 169 ++ GIR++GPNC G+ + F +F + R G +A +SQSGAFG A L Sbjct: 124 RKWGIRVVGPNCLGVTNIENGFDCNFNPPERQARPKFGPIAFMSQSGAFGAAILDWAARH 183 Query: 170 NVGFSAFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPV 229 VG S F+S GN ADLDESDF+ Y DD TKVI YIEGVKDGRKFF A K T KPV Sbjct: 184 EVGMSKFISLGNMADLDESDFMLYLKDDPKTKVITAYIEGVKDGRKFFNAAKETTKVKPV 243 Query: 230 IILKAGKSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQSA 289 IILKAG++E+GAKAA SHTGSLAGSY+IY+A FKQ + + M +LF+ AKA M A Sbjct: 244 IILKAGRTEAGAKAAASHTGSLAGSYKIYEAAFKQSGVLMAKSMRQLFNYAKALAMQNPA 303 Query: 290 -GSRVAVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREF-----LPPQCSTRNPID 343 G RVA++TN GG GV+ +D L + GL++A +EET K R+ LP S RNP+D Sbjct: 304 KGDRVAIVTNGGGAGVMMSDGLLEHGLKLAEFTEETKEKFRKAIEEGKLPEHMSYRNPVD 363 Query: 344 LIADADYERYRRTIEVVCQDENVDSLLVICVPPIFIPSEEIARAIIEA-----KCNKPII 398 +I DA RY I V +D NVD ++VI + S + I++ + KPI+ Sbjct: 364 VIGDAPSSRYEVAIRYVLEDPNVDIVVVIAL----FQSPALDEGIVDVMGRVKEYGKPIV 419 Query: 399 VNFMAGELVKKGVELLNAHGIKNFPTPERAAKALYWL 435 GE + + GI F T E A+Y L Sbjct: 420 FVAPGGEFPEAMARRIEKVGIPVFETVEDGVDAVYAL 456 >pir||G71124 hypothetical protein PH0766 - Pyrococcus horikoshii >gi|3257174|dbj|BAA29857.1| (AP000003) 457aa long hypothetical protein [Pyrococcus horikoshii] Length = 457 Score = 365 bits (928), Expect = e-100 Identities = 199/454 (43%), Positives = 285/454 (61%), Gaps = 15/454 (3%) Query: 1 MDYFFYPKSVAIFGSFREGA-IAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRK 59 +DYFF PK +A+ G+ + + E+ +N+ E +GK+ PVN K V+ + ++ K Sbjct: 2 LDYFFNPKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEEEVQGV-KAYKSVK 59 Query: 60 RLEEEVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVDL--EEELIKAAK 115 + +E+D++I+V+P + V + + KG+ KG V+I+AGF E G E+EL++ A Sbjct: 60 DIPDEIDLAIIVVPKRFVKDTLIQCGEKGV-KGVVIITAGFGETGEEGKREEKELVEIAH 118 Query: 116 EAGIRIIGPNCAGIFGVHGKFFGSFEVRVNPGGLALISQSGAFGGAALAMGNEENVGFSA 175 + G+RIIGPNC GI H +F G +A ISQSGA G + +E++GFS Sbjct: 119 KYGMRIIGPNCVGIMNTHVDLNATFITVAKKGNVAFISQSGALGAGIVYKTIKEDIGFSK 178 Query: 176 FVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAG 235 F+S GN AD+D ++ + Y AD E K IALYIEGV++G+KF E K T KKP+I LKAG Sbjct: 179 FISVGNMADVDFAELMEYLADTEEDKAIALYIEGVRNGKKFMEVAKRVTKKKPIIALKAG 238 Query: 236 KSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQSAGSRVAV 295 KSESGA+AA SHTGSLAGS++IY+A FKQ + ++E+ A+AF G++VA+ Sbjct: 239 KSESGARAASSHTGSLAGSWKIYEAAFKQSGVLVANTIDEMLSMARAFSQPLPRGNKVAI 298 Query: 296 ITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYRR 355 +TN+GGPGVL D+L+K GL++A L E+T+ +LR FLPP + +NP+D+IA A E Y R Sbjct: 299 MTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYR 358 Query: 356 TIEVVCQDENVDSLLVICVPPIFI------PSEEIARAIIEAKCNKPIIVNFMAGELVKK 409 T +++ QD NVD L+ ICV P F +E I RA+ E KP++ FMAG + +K Sbjct: 359 TAKLLLQDPNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFMAGYVSEK 418 Query: 410 GVELLNAHGIKNFPTPERAAKALYWL-SKRKNQG 442 ELL +GI + PE A A Y L + KN G Sbjct: 419 AKELLEKNGIPTYERPEDVASAAYALVEQAKNVG 452 >pir||D75038 hypothetical protein PAB0854 - Pyrococcus abyssi (strain Orsay) >gi|5458714|emb|CAB50201.1| (AJ248287) hypothetical protein [Pyrococcus abyssi] Length = 457 Score = 365 bits (926), Expect = e-100 Identities = 202/454 (44%), Positives = 280/454 (61%), Gaps = 15/454 (3%) Query: 1 MDYFFYPKSVAIFGSFREGA-IAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRK 59 +DYFF PK +A+ G+ + + E+ +N+ + G + PVN + V+ + ++ K Sbjct: 2 LDYFFNPKGIAVIGASNDPKKLGYEVFKNLKQYK-GGNVYPVNVREEEVQGV-KAYKSVK 59 Query: 60 RLEEEVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVDLEEE--LIKAAK 115 + EVD++I+V+P K V + + KG+ KG V+I+AGF E G +EE L++ A Sbjct: 60 DIPGEVDLAIIVVPKKFVKDTLIQCGEKGV-KGVVIITAGFGETGEEGKKEEKELVEIAH 118 Query: 116 EAGIRIIGPNCAGIFGVHGKFFGSFEVRVNPGGLALISQSGAFGGAALAMGNEENVGFSA 175 G+RIIGPNC GI H +F G +A ISQSGA G + +E++GFS Sbjct: 119 RYGMRIIGPNCVGIMNTHADLNATFITVAKKGNVAFISQSGALGAGIVYKTIKEDIGFSK 178 Query: 176 FVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAG 235 F+S GN ADLD ++ + Y AD E K IALYIEG+++GRKF E K T KKPVI LKAG Sbjct: 179 FISVGNMADLDFAELMEYLADTEEDKAIALYIEGIRNGRKFIEVAKRVTKKKPVIALKAG 238 Query: 236 KSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQSAGSRVAV 295 KSESGA+AA SHTGSLAGS++IY+A FKQ + ++E+ A+AF G RVA+ Sbjct: 239 KSESGARAASSHTGSLAGSWKIYEAAFKQSGVLVANTIDEMLSMARAFTQPLPRGKRVAI 298 Query: 296 ITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYRR 355 +TN+GGPGVL D+L+K GL++A L E+T+ +LR FLPP + +NP+D+IA A E Y R Sbjct: 299 MTNAGGPGVLTADELDKRGLKLANLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYR 358 Query: 356 TIEVVCQDENVDSLLVICVPPIFI------PSEEIARAIIEAKCNKPIIVNFMAGELVKK 409 T +++ QD NVD L+ ICV P F +E I RAI E KP++ FMAG + +K Sbjct: 359 TAKLLLQDPNVDMLIAICVVPTFAGMTPTEHAEGIIRAIKEVNNGKPVLAMFMAGYVSEK 418 Query: 410 GVELLNAHGIKNFPTPERAAKALYWL-SKRKNQG 442 ELL +GI + PE A A Y L + KN G Sbjct: 419 AKELLEKNGIPTYERPEDVASAAYALVEQAKNVG 452 >pir||H71207 hypothetical protein PH1928 - Pyrococcus horikoshii >gi|3258372|dbj|BAA31055.1| (AP000007) 466aa long hypothetical protein [Pyrococcus horikoshii] Length = 466 Score = 364 bits (924), Expect = 1e-99 Identities = 213/459 (46%), Positives = 280/459 (60%), Gaps = 28/459 (6%) Query: 1 MDYFFYPKSVAIFG-SFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRK 59 +D+ FYP+SVA+ G S G + ILR++V F GKI VN KGG +EV G++F++ K Sbjct: 6 LDFLFYPESVAVIGASHVPGKVGNGILRSLVNN-FRGKIYAVNVKGGEIEVNGKKFKVYK 64 Query: 60 RLEE---EVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVDLEEELIKAA 114 +++ +VDV+++ +PAK VP +I E KG+ KG VVISAGF E G DLEEEL+K A Sbjct: 65 SIKDVPDKVDVAVIAVPAKFVPEVIDECGEKGV-KGVVVISAGFKEAGRADLEEELVKRA 123 Query: 115 KEAGIRIIGPNCAGIFGVHGKFFGSF-----EVRVNPGGLALISQSGAFGGAALAMGNEE 169 K+ GIR++GPNC G+ + F +F + R G +A +SQSGAFG A L Sbjct: 124 KKWGIRVVGPNCLGVTNLENGFDCNFNPPERQARPKFGPIAFMSQSGAFGAAILDWAARH 183 Query: 170 NVGFSAFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPV 229 VG S F+S GN ADLDESDF+ Y +D TKVI YIEGVKDG+KFF K T KPV Sbjct: 184 EVGMSKFISLGNMADLDESDFMLYLKNDPKTKVITAYIEGVKDGKKFFNVAKETTKVKPV 243 Query: 230 IILKAGKSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQSA 289 I+LKAG++E+GAKAA SHTGSLAGSY IY+AVF+Q + + M +LF+ AKA M + A Sbjct: 244 IVLKAGRTEAGAKAAASHTGSLAGSYRIYEAVFEQTGILAAKSMRQLFNYAKALAMQKPA 303 Query: 290 -GSRVAVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREF-----LPPQCSTRNPID 343 G RVA++TN GG GV+ +D L + GL++A LSEET K R+ LP S NP+D Sbjct: 304 NGDRVAIVTNGGGAGVMMSDGLLERGLKLAELSEETKDKFRKAIEEGKLPEHMSYANPVD 363 Query: 344 LIADADYERYRRTIEVVCQDENVDSLLVICVPPIFIPSEEIARAIIEA-----KCNKPII 398 +I DA RY I V +D NVD L VI + S + I++ K KPI+ Sbjct: 364 VIGDAPSSRYELAINYVLEDPNVDILAVIAL----FQSPALDEGIVDVMDRVKKYGKPIV 419 Query: 399 VNFMAGELVKKGVELLNAHGIKNFPTPERAAKALYWLSK 437 GE +K + G+ F T E A+Y L K Sbjct: 420 FIAPGGEFPEKIARRIEKVGVPVFETVEDGVDAVYALVK 458 >gi|11498810 conserved hypothetical protein [Archaeoglobus fulgidus] >gi|7448044|pir||B69401 conserved hypothetical protein AF1211 - Archaeoglobus fulgidus >gi|2649370|gb|AAB90033.1| (AE001020) conserved hypothetical protein [Archaeoglobus fulgidus] Length = 685 Score = 346 bits (879), Expect = 2e-94 Identities = 193/443 (43%), Positives = 275/443 (61%), Gaps = 15/443 (3%) Query: 1 MDYFFYPKSVAIFG-SFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRK 59 M+ FYPK VA+ G S +EG + I++N+ F G + VNPK + + + Sbjct: 1 MERLFYPKVVAVIGASPQEGKVGNTIMKNL--RNFSGTVYAVNPKYREI-LGFPCYPSVL 57 Query: 60 RLEEEVDVSIVVIPAKLVPGLIREL-KGLTKGAVVISAGFSEVG--NVDLEEELIKAAKE 116 ++ E VD++I+V+PAKLVP + E + +GAVVISAGF E G LE EL++ A+ Sbjct: 58 KIPENVDLAIIVVPAKLVPKAVEECGRKDVEGAVVISAGFKEAGIEGAKLERELVEVAER 117 Query: 117 AGIRIIGPNCAGIFGVHGKFFGSFEVRVNP--GGLALISQSGAFGGAALAMGNEENVGFS 174 G++++GPNC G+ +F RV P G +A +SQSGAF A L VGFS Sbjct: 118 YGVKLVGPNCLGMINTEIAMNATFS-RVAPEKGRIAFLSQSGAFILAVLEWSKRNGVGFS 176 Query: 175 AFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKA 234 VS GN A LDESDFL Y A D++T VI +Y+EGV+DGRKF K +KPV+++KA Sbjct: 177 KVVSLGNKAMLDESDFLEYLAKDDSTDVILIYMEGVEDGRKFMRVAKSVARRKPVVVMKA 236 Query: 235 GKSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQSAGSRVA 294 GKS+SGAKAA SHTGSLAGSYE Y+A F+Q IE +EELFD A Y+ AG+ +A Sbjct: 237 GKSQSGAKAASSHTGSLAGSYEAYRAAFRQSGVIEASSVEELFDFALLLLKYRKAGN-LA 295 Query: 295 VITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYR 354 ++TNSGGPGV+A D ++ G+ +A + ET+ KL+EFLP + + NP+D++ DA ER+ Sbjct: 296 ILTNSGGPGVMAADACDQFGVPLANFNFETIRKLKEFLPAESNFYNPVDILGDASAERFS 355 Query: 355 RTIEVVCQDENVDSLLVICVPPIFIPSEEIARAIIEAKCNKPIIVNFMAGELVKKGVELL 414 R+++++ +DENVD +L I P + + A +++ K + FM GE V + +L Sbjct: 356 RSLQILSEDENVDIVLTILTPTAQMDFLKAAESVV----GKNAVCCFMGGESVDESERIL 411 Query: 415 NAHGIKNFPTPERAAKALYWLSK 437 + GI NF P RA +A+ L + Sbjct: 412 RSSGIPNFFDPVRAVRAISVLGR 434 >sp|Q58010|Y590_METJA HYPOTHETICAL PROTEIN MJ0590 >gi|2128020|pir||F64373 hypothetical protein homolog MJ0590 - Methanococcus jannaschii >gi|1591298|gb|AAB98580.1| (U67507) conserved hypothetical protein [Methanococcus jannaschii] Length = 704 Score = 339 bits (861), Expect = 3e-92 Identities = 195/449 (43%), Positives = 275/449 (60%), Gaps = 18/449 (4%) Query: 1 MDYFFYPKSVAIFGSFR-EGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRR-FEIR 58 + Y YPKSVAI G+ + EG + I++N+ + F GKI P+NPK E+ G + ++ Sbjct: 8 LKYISYPKSVAIIGASKTEGKVGYAIMKNLKD--FNGKIYPINPKYD--EIFGIKCYKSV 63 Query: 59 KRLEEEVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVDLEEELIKAAKE 116 +E+++D++++V+P +VP ++ E KG+ KGAV+I+AGFSEVGN +LE ++ + AK Sbjct: 64 LDVEDDIDLAVIVVPNIVVPKVLEECGKKGV-KGAVIITAGFSEVGNYELENKIKEIAKR 122 Query: 117 AGIRIIGPNCAGIFGVHGKFFGSFEVRVNP-GGLALISQSGAFGGAALAMGNEENVGFSA 175 IRIIGPNC GI H +F P GG+++ISQSGA A L + N+GFS Sbjct: 123 YNIRIIGPNCLGIMNTHINLNATFAKVFPPKGGVSIISQSGAVLNAILDIAPLLNIGFSK 182 Query: 176 FVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAG 235 VS GN AD+ ESD L YF DDE+TK++ LYIEG+KD ++F + K + KKP+I LK+G Sbjct: 183 VVSIGNKADIQESDLLEYFLDDEDTKIVVLYIEGLKD-KRFLKVAKKLSKKKPIIALKSG 241 Query: 236 KSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQSAGSR-VA 294 ++E G KAA+SHTGSLAG IY+A FK+ I EEL D F + S + Sbjct: 242 RTEVGKKAAKSHTGSLAGEDVIYEAAFKEAGIIRAYTFEELVDLIHLFSTQPTISSNEIG 301 Query: 295 VITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYR 354 +ITN+GG GVLA D ++++ + T+ KL+ LPP + NP+D+I DA ERY+ Sbjct: 302 IITNAGGFGVLAADSCVDYNMKLSNFEKSTIEKLKNILPPTANISNPLDIIGDATPERYK 361 Query: 355 RTIEVVCQDENVDSLLVICVPPIFIPSEEIARAIIEAK------CNKPIIVNFMAGELVK 408 + IEV+ +D NV LLVI P E+A++IIE K NKP+I +F+ G VK Sbjct: 362 KVIEVLAEDSNVKGLLVILTPQEMTKPLEVAKSIIEVKNSHKEFKNKPLITSFVGGVSVK 421 Query: 409 KGVELLNAHGIKNFPTPERAAKALYWLSK 437 L +GI + TPE KAL L K Sbjct: 422 GAKSYLRKNGIPAYITPENGVKALSHLYK 450 >pir||A71028 hypothetical protein PH1517 - Pyrococcus horikoshii >gi|3257942|dbj|BAA30625.1| (AP000006) 460aa long hypothetical protein [Pyrococcus horikoshii] Length = 460 Score = 336 bits (852), Expect = 3e-91 Identities = 194/451 (43%), Positives = 278/451 (61%), Gaps = 16/451 (3%) Query: 1 MDYFFYPKSVAIFG-SFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRK 59 ++ F PKS+A+ G S + G I I++N++E G+EGKI PVN KGG +E++GR+F++ K Sbjct: 3 LEALFNPKSIAVIGASSKPGKIGYAIMKNLIEYGYEGKIYPVNIKGGEMEISGRKFKVYK 62 Query: 60 RLEE---EVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVD--LEEELIK 112 + E EVD++++V+PAK VP ++ E KG+ K A +IS+GF E+G +E++L++ Sbjct: 63 SILEVPDEVDMAVIVVPAKSVPEVVEECGKKGV-KVAPIISSGFGELGEEGKKVEQQLVE 121 Query: 113 AAKEAGIRIIGPNCAGIFGVHGKFFGSF-EVRVNPGGLALISQSGAFGGAALAMGNEENV 171 A++ G+RI+GPN G+ K +F V PG LALISQSGA G A + E + Sbjct: 122 TARKYGMRILGPNIFGVVYTPAKLNATFGPTDVLPGPLALISQSGALGIALMGWTILEKI 181 Query: 172 GFSAFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVII 231 G SA VS GN AD+D++D L +F DDENTK I +Y+EGVKDGR+F E K + KKP+I+ Sbjct: 182 GLSAVVSVGNKADIDDADLLEFFKDDENTKAILIYMEGVKDGRRFMEVAKEVSKKKPIIV 241 Query: 232 LKAGKSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAF-EMYQSAG 290 +KAG+SE GAKAA SHTGSLAGS IY A FKQ + + E FD A+A + + G Sbjct: 242 IKAGRSERGAKAAASHTGSLAGSDTIYSAAFKQTGVLRALTIGEAFDWARALSNLPEPQG 301 Query: 291 SRVAVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADY 350 V +ITN GG GV+ATD E+ GL + E + +PP S +NP+DL AD Sbjct: 302 ENVVIITNGGGIGVMATDAAEEEGLHLYD-DLEQLKIFANHMPPFGSYKNPVDLTGMADA 360 Query: 351 ERYRRTIEVVCQDENVDSLLVICVPPIFIPSEEIARAII----EAKCNKPIIVNFMAGEL 406 + Y I ++ S++V+ + E+A II E+ KP++V + G Sbjct: 361 KSYEGAIRDALAHPDMHSIIVLYCQTAVLDPRELADVIIREYNESGRKKPLVVAIVGGIE 420 Query: 407 VKKGVELLNAHGIKNFPTPERAAKALYWLSK 437 K+ +++LN +GI +P PERA KAL L K Sbjct: 421 AKQAIDVLNENGIPAYPEPERAVKALSALYK 451 >pir||D75106 hypothetical protein PAB1937 - Pyrococcus abyssi (strain Orsay) >gi|5458076|emb|CAB49565.1| (AJ248285) hypothetical protein [Pyrococcus abyssi] Length = 460 Score = 335 bits (851), Expect = 5e-91 Identities = 191/446 (42%), Positives = 275/446 (60%), Gaps = 16/446 (3%) Query: 1 MDYFFYPKSVAIFG-SFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRK 59 ++ F PKS+A+ G S + G I I++N++E G+EGKI PVN KGG +E++GR+F++ K Sbjct: 3 LEALFNPKSIAVIGASSKPGKIGYAIMKNLIEYGYEGKIYPVNIKGGEMEISGRKFKVYK 62 Query: 60 RLEE---EVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVD--LEEELIK 112 + E EVD++I+V+PAK VP ++ E KG+ K +IS+GF E+G +E++L++ Sbjct: 63 SILEVPDEVDMAIIVVPAKFVPQVVEECGQKGV-KVVPIISSGFGELGEEGKKVEQQLVE 121 Query: 113 AAKEAGIRIIGPNCAGIFGVHGKFFGSF-EVRVNPGGLALISQSGAFGGAALAMGNEENV 171 A++ G+RI+GPN G+ K G+F V PG LALISQSGA G A + E + Sbjct: 122 TARKYGMRILGPNIFGVVYTPAKLNGTFGPTDVLPGPLALISQSGALGIALMGWTILEKI 181 Query: 172 GFSAFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVII 231 G SA VS GN AD+D++D L +F DDENT+ I +Y+EGVKDGR+F E K + KKP+I+ Sbjct: 182 GLSAVVSVGNKADIDDADLLEFFKDDENTRAILIYMEGVKDGRRFMEVAKEVSKKKPIIV 241 Query: 232 LKAGKSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAF-EMYQSAG 290 +KAG+SE GAKAA SHTGSLAGS IY A FKQ + + E FD A+A + + G Sbjct: 242 IKAGRSERGAKAAASHTGSLAGSDTIYSAAFKQSGVLRALTIGEAFDWARALSNLPEPQG 301 Query: 291 SRVAVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADY 350 V +ITN GG GV+ATD E+ GL++ E + +PP S +NP+DL AD Sbjct: 302 DNVVIITNGGGIGVMATDAAEEEGLKLYD-DLEQLKIFANHMPPFGSYKNPVDLTGMADA 360 Query: 351 ERYRRTIEVVCQDENVDSLLVICVPPIFIPSEEIARAII----EAKCNKPIIVNFMAGEL 406 + Y I + S++V+ + ++A II E+ KP++V + G Sbjct: 361 KSYEGAIRDALNHPEMHSIIVLYCQTAVLDPRDLAEIIIREYNESGRKKPLVVAIVGGIE 420 Query: 407 VKKGVELLNAHGIKNFPTPERAAKAL 432 K+ ++ LN +GI +P PERA KAL Sbjct: 421 AKEAIDTLNENGIPAYPEPERAVKAL 446 >pir||T48661 acetate--CoA ligase (ADP-forming) (EC 6.2.1.13) alpha chain [validated] - Pyrococcus furiosus >gi|5419966|emb|CAB46516.1| (AJ240061) acetyl-CoA synthetase [Pyrococcus furiosus] Length = 462 Score = 335 bits (849), Expect = 8e-91 Identities = 191/451 (42%), Positives = 276/451 (60%), Gaps = 16/451 (3%) Query: 1 MDYFFYPKSVAIFG-SFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRK 59 ++ F PKSVA+ G S + G I I++N++E G+EGKI PVN KGG +E+ GR+F++ K Sbjct: 3 LEALFNPKSVAVIGASAKPGKIGYAIMKNLIEYGYEGKIYPVNIKGGEIEINGRKFKVYK 62 Query: 60 ---RLEEEVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVD--LEEELIK 112 + +EVD++++V+PAK VP ++ E KG+ K +IS+GF E+G +E++L++ Sbjct: 63 SVLEIPDEVDMAVIVVPAKFVPQVLEECGQKGV-KVVPIISSGFGELGEEGKKVEQQLVE 121 Query: 113 AAKEAGIRIIGPNCAGIFGVHGKFFGSF-EVRVNPGGLALISQSGAFGGAALAMGNEENV 171 A++ G+RI+GPN G+ K +F V PG LALISQSGA G A + E + Sbjct: 122 TARKYGMRILGPNIFGVVYTPAKLNATFGPTDVLPGPLALISQSGALGIALMGWTILEKI 181 Query: 172 GFSAFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVII 231 G SA VS GN AD+D++D L +F DDENT+ I +Y+EGVKDGR+F E K + KKP+I+ Sbjct: 182 GLSAVVSVGNKADIDDADLLEFFKDDENTRAILIYMEGVKDGRRFMEVAKEVSKKKPIIV 241 Query: 232 LKAGKSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAF-EMYQSAG 290 +KAG+SE GAKAA SHTGSLAGS ++Y A FKQ + + E FD A+A + + G Sbjct: 242 IKAGRSERGAKAAASHTGSLAGSDKVYSAAFKQSGVLRAYTIGEAFDWARALSNLPEPQG 301 Query: 291 SRVAVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADY 350 V +ITN GG GV+ATD E+ GL + EE + +PP S +NP+DL AD Sbjct: 302 DNVVIITNGGGIGVMATDAAEEEGLHLYDNLEE-LKIFANHMPPFGSYKNPVDLTGMADG 360 Query: 351 ERYRRTIEVVCQDENVDSLLVICVPPIFIPSEEIARAII----EAKCNKPIIVNFMAGEL 406 + Y I + S+ V+ + E+A +I E+ KP++V + G Sbjct: 361 KSYEGAIRDALAHPEMHSIAVLYCQTAVLDPRELAEIVIREYNESGRKKPLVVAIVGGIE 420 Query: 407 VKKGVELLNAHGIKNFPTPERAAKALYWLSK 437 K+ +++LN +GI +P PERA KAL L K Sbjct: 421 AKEAIDMLNENGIPAYPEPERAIKALSALYK 451 >pir||E71189 hypothetical protein PH1789 - Pyrococcus horikoshii >gi|3258225|dbj|BAA30908.1| (AP000007) 472aa long hypothetical protein [Pyrococcus horikoshii] Length = 472 Score = 331 bits (840), Expect = 9e-90 Identities = 190/447 (42%), Positives = 266/447 (59%), Gaps = 20/447 (4%) Query: 4 FFYPKSVAIFGSF-REGAIAREILRNIVE----GGFEGKIIPVNPKGGTVEVAGRRFEIR 58 FF PK+VAI G+ ++G + I N + G F+G I PVNPK +E + + Sbjct: 13 FFEPKAVAIIGATNKKGKVGNVIFENFKKNKEKGIFKGNIYPVNPKLDEIE-GYKVYHDV 71 Query: 59 KRLEEEVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVD--LEEELIKAA 114 L ++ D++++ IPA VP +R++ KG+ K ++I+ GF E+G +E+E+++ A Sbjct: 72 SELPDDTDLAVIAIPAPAVPETMRKIGEKGI-KSVIIITGGFGELGEEGKRMEQEILEIA 130 Query: 115 KEAGIRIIGPNCAGIF----GVHGKFFGSFEVRVNPGG-LALISQSGAFGGAALAMGNEE 169 + GIR+IGPNC G++ GV F ++ P G +A ISQSGAF A L Sbjct: 131 RANGIRVIGPNCVGVYVPDTGVDTVFLPDEKMDRPPSGPIAFISQSGAFAAAMLDWAAMA 190 Query: 170 NVGFSAFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPV 229 +G VSYGN D+D++D + YFA D+ KV+ YIEGVKDGRKF E K T KP+ Sbjct: 191 GIGIGKMVSYGNKIDVDDADLMEYFAHDDEIKVMTFYIEGVKDGRKFMETAKRVTKIKPI 250 Query: 230 IILKAGKSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQ-S 288 I LK+G++E GAKAA SHTGSLAG IY AVFKQ I E+ E +FD AKAF + Sbjct: 251 IALKSGRTEYGAKAASSHTGSLAGQDVIYDAVFKQTGIIRAEDFEHMFDLAKAFAKCKLP 310 Query: 289 AGSRVAVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADA 348 G R+ +IT+ GG GV+A+D + K GL++A LSEET+ LRE PP NP D++ D Sbjct: 311 KGDRIGIITDGGGAGVMASDAVAKFGLKLAELSEETIKFLRERFPPHAVVGNPTDVVGDT 370 Query: 349 DYERYRRTIEVVCQDENVDSLLVICVPPI-FIPSEEIARAIIE--AKCNKPIIVNFMAGE 405 D ERYR +E +D NVD++L+I + + + EE+ I + K +KPI+V M G Sbjct: 371 DAERYRLALEAFTKDPNVDAILLIVLFQVPLLDEEEVINIITDYAKKSDKPIVVVSMGGY 430 Query: 406 LVKKGVELLNAHGIKNFPTPERAAKAL 432 K +L GI +PTPER +AL Sbjct: 431 KTDKYARMLEERGIPVYPTPERGVRAL 457 >pir||E75149 succinyl-coa synthetase alpha chain related protein PAB2112 - Pyrococcus abyssi (strain Orsay) >gi|5457786|emb|CAB49276.1| (AJ248284) SUCCINYL-COA SYNTHETASE ALPHA CHAIN related protein [Pyrococcus abyssi] Length = 472 Score = 326 bits (826), Expect = 4e-88 Identities = 187/447 (41%), Positives = 267/447 (58%), Gaps = 20/447 (4%) Query: 4 FFYPKSVAIFGSF-REGAIAREIL----RNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIR 58 FF P++VAI G+ ++G + I RN +G F+G I PVNPK ++ + + Sbjct: 13 FFEPRAVAIIGATNKKGKVGNVIFENFKRNKEKGIFKGNIYPVNPKLDEID-GYKVYHDV 71 Query: 59 KRLEEEVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVD--LEEELIKAA 114 L ++ D++++ IPA VP ++++ KG+ K ++I+ GF E+G +E+E+++ A Sbjct: 72 SELPDDTDLAVIAIPAPAVPETMKKIAEKGI-KAVIIITGGFGELGEEGKRMEQEILEIA 130 Query: 115 KEAGIRIIGPNCAGIF----GVHGKFFGSFEV-RVNPGGLALISQSGAFGGAALAMGNEE 169 + GIR+IGPNC G++ GV F ++ R G +A ISQSGAF A L Sbjct: 131 RANGIRVIGPNCVGVYAPDTGVDTVFLPEEKMDRPKSGPIAFISQSGAFAAAMLDWAAMA 190 Query: 170 NVGFSAFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPV 229 +G VSYGN D+D++D + YFA D+ KV+ YIEGVKDGRKF E K T KP+ Sbjct: 191 GIGIGKMVSYGNKIDVDDADLMEYFAQDDEIKVMTFYIEGVKDGRKFMETAKRVTKIKPI 250 Query: 230 IILKAGKSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQ-S 288 I LK+G++E GAKAA SHTGSLAG IY AVFKQ I E+ E +FD AKAF + Sbjct: 251 IALKSGRTEYGAKAASSHTGSLAGQDVIYDAVFKQTGIIRAEDFEHMFDLAKAFAKCKLP 310 Query: 289 AGSRVAVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADA 348 G R+ +IT+ GG GV+A+D + K GL++A LSEET+ L+E PP NP D++ D Sbjct: 311 KGDRIGIITDGGGAGVMASDAVAKFGLKLAELSEETIKFLKERFPPHAVVGNPTDVVGDT 370 Query: 349 DYERYRRTIEVVCQDENVDSLLVICVPPIFIPSEEIARAII---EAKCNKPIIVNFMAGE 405 D ERYR +E +D NVD++L+I + + + E+ II K +KPI+V M G Sbjct: 371 DAERYRLALEAFIKDPNVDAILLIVLFQVPLLDEKEVIDIITDYAKKSDKPIVVVSMGGY 430 Query: 406 LVKKGVELLNAHGIKNFPTPERAAKAL 432 K ++L GI +PTPER +AL Sbjct: 431 KTDKYAKMLEERGIPVYPTPERGVRAL 457 >emb|CAC12278.1| (AL445066) probable acetyl-CoA synthetase [Thermoplasma acidophilum] Length = 698 Score = 284 bits (720), Expect = 1e-75 Identities = 165/444 (37%), Positives = 257/444 (57%), Gaps = 13/444 (2%) Query: 5 FYPKSVAIFGSFREGA-IAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRKRLEE 63 FYP+SVA+ G+ + I +I+RN+ EGG++GK+ PVN KGG + + + + + Sbjct: 12 FYPESVAVIGASADKTKIGYQIVRNLKEGGYQGKVYPVNRKGGNI-LGYTVYPSIGDVPD 70 Query: 64 EVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVDLEEELIKAAKEAGIRI 121 +VD++I+ +PA+ P E KG+ G +V+++GFSEVG DLE++L++ ++ +R+ Sbjct: 71 KVDLAIISVPAEHTPEAAEECGKKGVF-GIIVVASGFSEVGRKDLEDQLVEVCRKYNMRL 129 Query: 122 IGPNCAGIFGVHGKFFGSFEVRV-NPGGLALISQSGAFGGAALAMGNEENVGFSAFVSYG 180 +GPN G+ K SF + PG + ++SQSGA AM G S +S G Sbjct: 130 LGPNVVGLMNNVLKLNASFAPYLPYPGTIGMVSQSGALIVGLDAMTWSNKTGTSFLISIG 189 Query: 181 NAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAGKSESG 240 N ADLD SD + + A+D N I+LY EG+K GR+F + + + KKP+++LK+G S+ G Sbjct: 190 NMADLDFSDLVSFLAEDNNVSCISLYTEGLKAGRRFIDTAR--SIKKPIVMLKSGISKHG 247 Query: 241 AKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMY-QSAGSRVAVITNS 299 + AA SHTGSLAGS+ +Y KQ + +EELFD + + G + V+TN Sbjct: 248 SVAAASHTGSLAGSHRVYDGALKQAGVVRANSIEELFDLSLTLSLQPPMGGDNLMVVTNG 307 Query: 300 GGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYRRTIEV 359 GG GVLATD+ E G+ + S++ AK+R+ +P ST+NPID+ A A E Y TI+ Sbjct: 308 GGIGVLATDQAELSGIPLQTPSDDLQAKIRQVIPSFGSTKNPIDMSAMATPEIYADTIKT 367 Query: 360 VCQDENVDSLLVICVPPIFIPSEEIARAIIEAKCNK----PIIVNFMAGELVKKGVELLN 415 V +D++VD L+V+ + + A+ II + P++ F+ GE K L Sbjct: 368 VMEDDSVDGLVVLYCEVANLDPSDAAKGIINGVLSSNRKIPVVAGFVGGEHSKNASLYLI 427 Query: 416 AHGIKNFPTPERAAKALYWLSKRK 439 +GI F +P++A KA+ L K Sbjct: 428 KNGIPTFDSPDKAVKAMAALRNHK 451 >gb|AAF88064.1|AF286346_1 (AF286346) acetyl-CoA synthetase [Entamoeba histolytica] Length = 713 Score = 279 bits (705), Expect = 6e-74 Identities = 160/441 (36%), Positives = 255/441 (57%), Gaps = 11/441 (2%) Query: 5 FYPKSVAIFG-SFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIR-KRLE 62 F PKSV + G S R+ ++ ++ N+++GG++G + PV K E+ G++ + ++E Sbjct: 7 FNPKSVPVIGASDRKESVGYAVMNNMIKGGYKGNLYPVGRKP---ELFGKKCYAKIGKIE 63 Query: 63 EEVDVSIVVIPAKLVPGLIREL-KGLTKGAVVISAGFSEVGNVDLEE--ELIKAAKEAGI 119 E+VD++++ IPAK VPG+ E + KG ++I+AGF+E G + E+ ++ + Sbjct: 64 EKVDLAVIAIPAKFVPGVCIECGEAGVKGLIIITAGFAEAGEEGKKMCIEIQATCQKYNM 123 Query: 120 RIIGPNCAGIFGVHGKFFGSF-EVRVNPGGLALISQSGAFGGAALAMGNEENVGFSAFVS 178 R+IGPNC GI SF V GG+A ISQSGA A L ++VGFS FVS Sbjct: 124 RMIGPNCLGIINPRDGVNASFASVMPEAGGVAFISQSGALCTAILDWAANQHVGFSYFVS 183 Query: 179 YGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAGKSE 238 G++ D D +D +FA D I +YIE +KD +KF + + KP+I+LKAGKS Sbjct: 184 IGSSIDTDYADLFEFFAKDPKVTSILMYIESIKDAKKFVLRAREFAADKPIILLKAGKSS 243 Query: 239 SGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQ-SAGSRVAVIT 297 GA AA SHTGSLAG+ +Y AVF + I V+ + +L+D A +R+ +IT Sbjct: 244 EGAAAAMSHTGSLAGNDAVYDAVFDRCGCIRVDSICDLWDCAHVLATQNIPQNNRLCIIT 303 Query: 298 NSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYRRTI 357 N+GGPGV++TD+L + +A+LSE T+ +L FL P S NP+D++ DA Y++T+ Sbjct: 304 NAGGPGVISTDRLVSVHGHLAKLSESTMNELNAFLSPFWSHSNPVDVLGDATAGVYQKTL 363 Query: 358 EVVCQDENVDSLLVICVPPIFIPSEEIARAIIE-AKCNKPIIVNFMAGELVKKGVELLNA 416 ++V +D +D ++V+ P +A++++E + + + + GV++L Sbjct: 364 DIVIKDPQIDGVVVVLTPQAMTDPVAVAKSLVEHGPYQNQSLPHGWVNQKSEAGVKILEE 423 Query: 417 HGIKNFPTPERAAKALYWLSK 437 I NF TPERA A ++ + Sbjct: 424 GKIPNFETPERAVTAFGYIMR 444 >gb|AAK42002.1| Conserved hypothetical protein [Sulfolobus solfataricus] Length = 660 Score = 269 bits (680), Expect = 5e-71 Identities = 157/442 (35%), Positives = 248/442 (55%), Gaps = 13/442 (2%) Query: 1 MDYFFYPKSVAIFGSFR-EGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRK 59 ++Y F P+S+A+ G+ R + + I RN++ F+GK+ P+N K VE + ++ K Sbjct: 4 LNYLFKPRSIAVVGASRHKEKVGNVIFRNLLST-FQGKLYPINTKAEDVEGV-KAYKSVK 61 Query: 60 RLEEEVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVDLEEELIKAAKEA 117 + +++D+ ++ +P ++VP + E KG+ K ++VI+AGF EVG LE E+I A++ Sbjct: 62 EIPDDIDLGVIAVPREVVPQTMEEFVEKGV-KASIVITAGFREVGEEKLENEVISIARKG 120 Query: 118 GIRIIGPNCAGIFGVHGKFFGSFEVR-VNPGGLALISQSGAFGGAALAMGNEENVGFSAF 176 GIR++GPN GI + +F +F V G + L+ QSG G L + +G S Sbjct: 121 GIRVLGPNTFGI--ITPEFNATFTYTDVKRGNVGLVVQSGGLGVYMLNWAQKYRIGISYM 178 Query: 177 VSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAGK 236 VS GN AD+ E + + Y + D T+ I +Y+EGV DG F E L AT +KPV+ LK G Sbjct: 179 VSLGNQADVKEYEVINYLSKDAETRAIFVYLEGVSDGNAFLEELPEATRRKPVVFLKGGV 238 Query: 237 SESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQSAGSRVAVI 296 S SGA AA++HTGSLAGS+E++KA I V+ + ++ + AK + + VI Sbjct: 239 SSSGASAAKTHTGSLAGSFEVFKAAVNTIGGILVDNLHDMLNLAKILMYSEPISEELLVI 298 Query: 297 TNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYRRT 356 TNSGG GVL +D+++K GL + + E +L + LPP +NP+DL DAD ERY Sbjct: 299 TNSGGHGVLVSDEIDKNGLRLVEIPEWMKKELTKILPPTSLPKNPLDLTGDADRERYHNA 358 Query: 357 IEVVCQDENVDSLLVICVPPIFIPSEEIARAIIEAKCNKPIIVNFMAGELVKKGVELLNA 416 +++V + ++V +P + ++AR I K I V E +++L Sbjct: 359 LKIVSSLDCTKLVIVQSLP--MVSCSDVARVISNFKGKGVIGVTMGLDE--DMALKILET 414 Query: 417 HGIKNFPTPERAAKALYWLSKR 438 GI + PE A KA+ + + R Sbjct: 415 TGIPGYTFPEDAVKAIKYYTFR 436 >gb|AAD44021.1|AF107206_1 (AF107206) acetyl-CoA synthetase [Giardia intestinalis] Length = 726 Score = 265 bits (669), Expect = 1e-69 Identities = 158/443 (35%), Positives = 244/443 (54%), Gaps = 16/443 (3%) Query: 1 MDYFFYPKSVAIFG-SFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAG-RRFEIR 58 + + P SVA+ G S G + ++ NI E G+ GK+ P+NP E+ G + ++ Sbjct: 15 LSFLTNPASVAVIGASPNAGKVGNTVVTNIKESGYTGKVYPINPTA--TEILGYKTYKSV 72 Query: 59 KRLEEEVDVSIVVIPAKLVPGLIREL-KGLTKGAVVISAGFSEVGN--VDLEEELIKAAK 115 + + +DV IVVIP+K V +E + K VVI+AGF E+G V +E++L K K Sbjct: 73 LDVPDSIDVVIVVIPSKAVLAAAKECAQKKVKSLVVITAGFKEIGGEGVQMEQDLTKICK 132 Query: 116 EAGIRIIGPNCAGIFGVH-GKFFGSFEVRVNPGGLALISQSGAFGGAALAMGNEENVGFS 174 +AGIR++GPNC GI + F S + + G +A +SQSGA + L +GFS Sbjct: 133 DAGIRLVGPNCLGIVTPNLNCTFAS--AKPSKGSIAFLSQSGAMLTSILDWALTNGIGFS 190 Query: 175 AFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKA 234 F+S GN AD+DE D + A+D NT +I LY+E + DGRKF E + KKPVIILK+ Sbjct: 191 NFISLGNKADVDEVDLIMEVAEDPNTDIILLYLESIVDGRKFLEQIPTCVHKKPVIILKS 250 Query: 235 GKSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQ-SAGSRV 293 G S +GA AA SHTG+LAG+ + F++ + M +LFD + F ++ G Sbjct: 251 GTSAAGAAAASSHTGALAGNDIAFDLAFEKAGVLRAATMSDLFDLGRLFVSHRLPKGDNF 310 Query: 294 AVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERY 353 ++TN+GGPG++ TD E + +A LS++T L + LP + S +NP+D++ DA +RY Sbjct: 311 VIVTNAGGPGIVTTDAFETYHVGMAALSDKTKEALAKVLPGEASVKNPVDIVGDAPPKRY 370 Query: 354 RRTIEVVCQD--ENVDSLLVICVPPIFIPSEEIARAIIEAKCNKP---IIVNFMAGELVK 408 +E+ ++ E V +++ P E+A P ++ FM G ++ Sbjct: 371 EDALEICFKEPPETVAGAVILVTPQGQTKPCEVAELCTRMYAKYPDRLVVSAFMGGLTMQ 430 Query: 409 KGVELLNAHGIKNFPTPERAAKA 431 + ++LN + FP PE A A Sbjct: 431 EPSKILNNAKMPVFPFPEPAIHA 453 >pir||T35770 hypothetical protein SC8A6.03c SC8A6.03c - Streptomyces coelicolor >gi|3288603|emb|CAA19775.1| (AL031013) hypothetical protein SC8A6.03c [Streptomyces coelicolor A3(2)] Length = 714 Score = 255 bits (645), Expect = 6e-67 Identities = 149/439 (33%), Positives = 239/439 (53%), Gaps = 15/439 (3%) Query: 7 PKSVAIFGSFRE-GAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRR-FEIRKRLEEE 64 P SVA+ G+ E G I ++RN+V+GGF G+I PVNPK ++ GR+ ++ + E Sbjct: 261 PASVAVIGASGEPGKIGNSVMRNLVDGGFAGEIHPVNPKAD--DILGRKAYKSVTDVPGE 318 Query: 65 VDVSIVVIPAKLVPGLIREL-KGLTKGAVVISAGFSEVGNVDLEEELIKAAKEAGIRIIG 123 VDV++ IPA+ V + E+ + AV+I +GF+E G L++E++ A+ G+R++G Sbjct: 319 VDVAVFAIPARFVAAALEEVGRKRIPNAVLIPSGFAETGEQALQDEIVAVAERHGVRLLG 378 Query: 124 PNCAGIFGVHGKFFGSFEVRVN-PGGLALISQSGAFGGAALAMGNEENVGFSAFVSYGNA 182 PN G + +F + GG+AL SQSG G A L G SA V GN Sbjct: 379 PNIYGYYSTWQDLCATFCTPYDVKGGVALTSQSGGIGMAILGFARTTKTGVSAIVGLGNK 438 Query: 183 ADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAGKSESGAK 242 +DLDE D L +F +D +T+ IA+++E +KDGR F EA + +KPV++LKAG++ +GAK Sbjct: 439 SDLDEDDLLTWFGEDPHTECIAMHLEDLKDGRAFVEAARATVPRKPVVVLKAGRTAAGAK 498 Query: 243 AAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQS-AGSRVAVITNSGG 301 AA SHTG+LAG +Y + +Q I + E+ + A+A + + G V +IT +GG Sbjct: 499 AAGSHTGALAGDDAVYDDILRQAGVIRAPGLNEMLEYARALPVLPAPEGDNVVIITGAGG 558 Query: 302 PGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYRRTIEVVC 361 GVL +D + GL + + + R F+PP + NP+D+ Y TI + Sbjct: 559 SGVLLSDAVTDNGLSLMEIPPDLDRAFRAFIPPFGAAGNPVDITGGEPPSTYEATIRLGL 618 Query: 362 QDENVDSLLV----ICVPPIFIPSEEIARAIIEAK---CNKPIIVNFMAGELVKKGVELL 414 +D + +L++ V P + +E AR + E + KP++ + V++ + L Sbjct: 619 EDPRIHALVLGYWHTIVTPPMVFAELTARVVAEFRERGVEKPVVASLAGDVEVEEACQYL 678 Query: 415 NAHGIKNFP-TPERAAKAL 432 G+ +P T E+ L Sbjct: 679 FERGVVAYPYTTEKPVAVL 697 >gi|11499522 conserved hypothetical protein [Archaeoglobus fulgidus] >gi|7483184|pir||A69492 conserved hypothetical protein AF1938 - Archaeoglobus fulgidus >gi|2648606|gb|AAB89317.1| (AE000970) conserved hypothetical protein [Archaeoglobus fulgidus] Length = 673 Score = 252 bits (636), Expect = 7e-66 Identities = 144/384 (37%), Positives = 227/384 (58%), Gaps = 19/384 (4%) Query: 5 FYPKSVAIFGSFRE-GAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRKRLEE 63 FYPKSVA+ G+ R G I+ N+ + GF GKI PVNP + + + + + + Sbjct: 222 FYPKSVAVIGASRTVGKPGFNIVWNLKQNGFMGKIYPVNPNADKI-LELKCYPSILDIPD 280 Query: 64 EVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVG--NVDLEEELIKAAKEAGI 119 EVD++I+ +PAK+VP ++ E KG+ KGAV++S+GFSE G + E +++ AK+ GI Sbjct: 281 EVDMAIIAVPAKIVPEVMAECAQKGI-KGAVIVSSGFSEEGEKGAEYERRVLEIAKKHGI 339 Query: 120 RIIGPNCAGIFGVHGKFFGSFEVR--VNPGGLALISQSGAFGGAA--LAMGNEENVGFSA 175 RI GPN G+ F SF ++ + G + +I+Q+G F G + N ++GFS Sbjct: 340 RIFGPNTTGVLNTENGFITSFAIQPVIKKGNIGIIAQTGLFLGIMMDIVTSNHPSIGFSK 399 Query: 176 FVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAG 235 V GN D+++ + L + DE TKVI +Y+EG+K+GR F++ ++++KP+++ K+G Sbjct: 400 IVGMGNKIDVEDYEVLDFLLKDEQTKVIGIYMEGIKNGRAFYDVA--SSAEKPIVVFKSG 457 Query: 236 KSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQ-SAGSRVA 294 ++E G KAA SHT S+ G +++ AV +Q N + V +ELFD KAF + G RVA Sbjct: 458 RTEYGQKAAMSHTASICGDDDVFDAVCRQANLVRVYSFDELFDVTKAFSLQPLPKGDRVA 517 Query: 295 VITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADY---- 350 +I +G V +D GL++A S++TV K+ E P + NPID+ +Y Sbjct: 518 IIHYTGSGCVQGSDAAYFAGLKLAEFSKDTVDKISEVTPEWHNVNNPIDIWPMVEYYGAF 577 Query: 351 ERYRRTIEVVCQDENVDSLLVICV 374 + Y+ IE V +DE VDS ++ CV Sbjct: 578 KAYQTAIEAVMEDEGVDS-VIACV 600 >gi|11498792 conserved hypothetical protein [Archaeoglobus fulgidus] >gi|7483097|pir||G69398 conserved hypothetical protein AF1192 - Archaeoglobus fulgidus >gi|2649402|gb|AAB90053.1| (AE001022) conserved hypothetical protein [Archaeoglobus fulgidus] Length = 664 Score = 249 bits (629), Expect = 5e-65 Identities = 163/461 (35%), Positives = 269/461 (57%), Gaps = 35/461 (7%) Query: 1 MDYFFYPKSVAIFGSFREGAI-AREILRNIVEGGFEGKIIPVNPKGGTVEVAGRR-FEIR 58 + +FF KSVA+ G+ R +L N+ GF GK+ PVNP G E+ G + + Sbjct: 218 ISFFFKAKSVAVIGASRNLLKPGGRVLSNLKHLGFRGKVYPVNPNAG--EILGYKCYPSV 275 Query: 59 KRLEEEVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSE--VGNVDLEEELIKAA 114 + + ++VD++++ +P+K +++E KG+ KG +V+SAGF+E +LE ++++ A Sbjct: 276 RAIPDKVDLAVIAVPSKNAIEVVKECAEKGV-KGIIVLSAGFAEGWEQGKELERQIVEIA 334 Query: 115 KEAGIRIIGPNCAGIFGVHGKFFGSFEV--RVNPGGLALISQSGAFGGAALAMGNEENVG 172 +++G+RI+GPN GI F V ++ G + +++QSGA L +VG Sbjct: 335 RKSGMRIVGPNTMGILDPESGLTSFFSVLRKIGQGNIGVLAQSGAVANFILLP--LWHVG 392 Query: 173 FSAFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIIL 232 FS V+ GN AD+ E + L + DE T+V+A Y+EG +GRKF+E +K +T KP+++L Sbjct: 393 FSKIVAIGNKADVGEVEVLNFLLKDEKTRVVAAYLEGFTNGRKFYELMKAST--KPIVVL 450 Query: 233 KAGKSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQ-SAGS 291 K+G++E+G ++A SHT S++ S EI++A KQ +V + EEL DAAKA + G+ Sbjct: 451 KSGRTEAGKRSALSHTASISTSEEIFEAACKQAGVAKVYDFEELVDAAKALALQPLPRGT 510 Query: 292 RVAVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADY- 350 RV VI SG V++ D + + GLE+A+ SE+T+ +L E P S NP+DL A+ Sbjct: 511 RVGVIQPSGAECVMSADAVVENGLELAKYSEKTLERLYELAPEWHSINNPLDLYPIAEKS 570 Query: 351 --ERYRRTIEVVCQDENVDSLLVICVPPIFIPSEEIARAIIE----AKCNKPIIVNFM-- 402 E + ++V +DEN+D++ V +FIPS I + ++ K +KP++ Sbjct: 571 GDEVFNEVLKVFNEDENIDAI----VAGVFIPS--IMKLGVDFSWTRKFSKPVLFTMKDD 624 Query: 403 AGELVKKGVELLNAHGIKNFPTPERAAKAL---YWLSKRKN 440 EL + +E + G+ +PTPERA +AL ++KRK+ Sbjct: 625 IEELRQARIE-IERSGVPVYPTPERAVRALRHMVTVAKRKS 664 >pir||C82443 conserved hypothetical protein VCA0574 [imported] - Vibrio cholerae (group O1 strain N16961) >gi|9657984|gb|AAF96476.1| (AE004388) conserved hypothetical protein [Vibrio cholerae] Length = 893 Score = 244 bits (617), Expect = 1e-63 Identities = 151/451 (33%), Positives = 247/451 (54%), Gaps = 20/451 (4%) Query: 7 PKSVAIFG----SFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRKRLE 62 PKSVA+ G SFR G I +++N+++GGF+G I+PV P V ++ L Sbjct: 10 PKSVAVIGASVRSFRAGNI---VMKNLLQGGFDGAIMPVTPYYPAV-CGVLAYKTISDLP 65 Query: 63 EEVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFS-EVGNVDLEEELIKAAKEAGI 119 D++I+ A L ++L KG+ + V+ S +S + +++ + + AK + Sbjct: 66 IVPDIAILCTHASRNVSLFKQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMTIAKSVNM 125 Query: 120 RIIGPNCAGIFGVHGKFFGSFE-VRVNPGGLALISQSGAFGGAALAMGNEENVGFSAFVS 178 RI+GPN G+ +F GSF V G +A +SQS A L N++ +GFSAF+S Sbjct: 126 RILGPNSLGLILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFIS 185 Query: 179 YGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAGKSE 238 GNA+D+D +D L + D++T I LY++ ++D R+F A + A+ + +++LK G+++ Sbjct: 186 LGNASDIDFADLLDTLSTDKHTDAILLYVDTIRDARRFMSAARAASRNRRILVLKGGRTK 245 Query: 239 SGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAF-EMYQSAGSRVAVIT 297 +G KAAQ HTG IY + ++ + V ELF A + G R+A+IT Sbjct: 246 AGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETLTHSVPLRGERLAIIT 305 Query: 298 NSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYRRTI 357 N GGP ++A D L + G ++A+L +E KL + LP S NP+D++ DAD+ RY T+ Sbjct: 306 NGGGPAIMAVDALLERGGKLAQLEDEIYEKLNQSLPQSWSHSNPVDIVGDADHLRYVSTL 365 Query: 358 EVVCQDENVDSLLVICVPPIFIPSEEIARAIIEAKCNKP------IIVNFMAGELVKKGV 411 ++ + EN+D++L++ P SE+ A+A++EA P I+ N+ K Sbjct: 366 NILLESENIDAILIMHSPSAIAHSEQTAQALVEAVQKHPRAKRFNILTNWSGELSAKPAR 425 Query: 412 ELLNAHGIKNFPTPERAAKA-LYWLSKRKNQ 441 L N GI + TPE A A ++ + R+NQ Sbjct: 426 TLFNQAGIPTYRTPESAVTAFMHLVEYRRNQ 456 >gi|11498537 conserved hypothetical protein [Archaeoglobus fulgidus] >gi|7483066|pir||D69366 conserved hypothetical protein AF0932 - Archaeoglobus fulgidus >gi|2649664|gb|AAB90306.1| (AE001039) conserved hypothetical protein [Archaeoglobus fulgidus] Length = 666 Score = 243 bits (614), Expect = 3e-63 Identities = 164/455 (36%), Positives = 249/455 (54%), Gaps = 24/455 (5%) Query: 1 MDYFFYPKSVAIFG-SFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAG-RRFEIR 58 + +FF +SVA+ G S + ++R+++ +I P+NP E+ G + + Sbjct: 219 ISFFFKARSVAVIGASTNPIKVGNSVVRSLMSNK-NLRIYPINPNAS--EILGLKAYPSV 275 Query: 59 KRLEEEVDVSIVVIPAKLVPGLIREL-KGLTKGAVVISAGFSEV----GNVDLEEELIKA 113 K L E D++IV +PA+ V +RE + KG V+IS+GF E G V EE L + Sbjct: 276 KSLPEVPDIAIVTVPAEFVLDAVREAAEAGVKGVVIISSGFKEAEVEEGKVR-EERLREI 334 Query: 114 AKEAGIRIIGPNCAGIFGVHGKFFGSFEV---RVNPGGLALISQSGAFGGAALAMGNEEN 170 A++ GIRI+GPN GI V G SF V G +AL+SQSG G + + Sbjct: 335 ARKYGIRIVGPNTFGIVSVVGGINASFTPMFSEVKKGRIALVSQSG--GICHYIIHKFRD 392 Query: 171 VGFSAFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVI 230 GFS + GN D+D D +R+ +DENT V+A+Y+EG+ +GR FE LK S+K V+ Sbjct: 393 SGFSHILHLGNRCDVDFPDVMRFLREDENTDVVAVYVEGIDNGRGLFEELKRLCSEKKVV 452 Query: 231 ILKAGKSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEMYQSAG 290 ++K+G+S KA+ SHTGS+AG Y ++ + KQ A+ VE EL D A A E ++ +G Sbjct: 453 VMKSGRSSVADKASVSHTGSMAGDYRVFASAMKQAGAVVVETPTELIDTAIAMEKFEVSG 512 Query: 291 SRVAVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDL-IADAD 349 VAV+T G G++A D +E G +AR EETV KL+ LPP NP+DL + + Sbjct: 513 G-VAVLTIQAGLGIVAADIIESSGGRLARFGEETVRKLKSLLPPITLRENPVDLSFSGLN 571 Query: 350 YERYRRTIEVVCQDENVD---SLLVICVPPIFIPSEEIARAIIEAKCNKPIIVNFMA-GE 405 + + I+ VC+D++V L + P +P+E I++ I + KP I+ + + E Sbjct: 572 LKVFAEVIDTVCRDDDVGLVMFLYAVAPPSWVLPAEVISQ--IMGRITKPSILGYSSTPE 629 Query: 406 LVKKGVELLNAHGIKNFPTPERAAKALYWLSKRKN 440 + E L F + ERAAK LS+++N Sbjct: 630 NYAEIKEALKGSKTLIFDSVERAAKVAAILSEKRN 664 >gi|11499106 conserved hypothetical protein [Archaeoglobus fulgidus] >gi|7483131|pir||F69438 conserved hypothetical protein AF1511 - Archaeoglobus fulgidus >gi|2649053|gb|AAB89736.1| (AE000998) conserved hypothetical protein [Archaeoglobus fulgidus] Length = 881 Score = 241 bits (608), Expect = 1e-62 Identities = 153/449 (34%), Positives = 251/449 (55%), Gaps = 22/449 (4%) Query: 1 MDYFFYPKSVAIFGSFRE-GAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRK 59 + +FF P+SVA+ G+ R+ + N++ F G PVN + + R + Sbjct: 191 LKHFFNPESVAVIGASRDVEKVGGRTFYNLLTYRFNGVAYPVNRAAKAI-MGVRAYPTIS 249 Query: 60 RLEEEVDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGN--VDLEEELIKAAK 115 + +EV+++++ +P K + E KG+ K +V++AGF+EVG V+ +++L++ + Sbjct: 250 EVPDEVELAVLSVPVKYALEVAEECGKKGV-KALLVLTAGFAEVGGEGVERQKKLVEICR 308 Query: 116 EAGIRIIGPNCAGIFGV--HGKFFGSFE-VRVNPGGLALISQSGAFGGAALAMGNEENVG 172 + G+R+IGPNC GI + +F N G +A SQSGA G A + N +G Sbjct: 309 KYGMRLIGPNCMGIINTAPETRLLATFAPTPPNEGSIAFASQSGAVGLALMDRVNNYGLG 368 Query: 173 FSAFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIIL 232 S FVS GN+AD+ +D + ++ +D TK+I LY E + + RKF K + KKP++ + Sbjct: 369 LSYFVSLGNSADITSNDLIEFWEEDGRTKLIMLYQESIPNPRKFARLAKRISKKKPILAI 428 Query: 233 KAGKSESGAKAAQSHTGSLAGSYEI-YKAVFKQGNAIEVEEMEELFDAAKAFEMYQ--SA 289 +G + +GAKA SHTG++ S I A+FKQ I ++ELF ++ F ++Q Sbjct: 429 ASGVTPAGAKAVASHTGAIVSSSGIAIDALFKQTGIIRASSIDELFSISE-FLLHQPLPK 487 Query: 290 GSRVAVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADAD 349 G+RV ++TN GG G + +D ++GLEIA LSE T LR LP S +NP+D+ A AD Sbjct: 488 GNRVCIVTNGGGLGAITSDWCHQVGLEIAELSERTQESLRNLLPEIASVKNPVDMTASAD 547 Query: 350 YERYRRTIEVVCQDENVDSLLVICVPPIF-IPSEEIARAIIEA-----KCNKPIIVNFMA 403 Y +T++ V +DENVD+++ I V + SEE+ +A+I A KP++ +++ Sbjct: 548 VRMYGQTLKTVAEDENVDAIICIFVAAVSEEKSEEVEKAVISAAKYANSVGKPVVYIYIS 607 Query: 404 GELVKKGVELLNAHGIKNFPTPERAAKAL 432 + K GV + + + + P AAK L Sbjct: 608 SD-SKDGV-IGDEVKVPVYVFPNTAAKVL 634 >gb|AAG19369.1| (AE005031) acetyl-CoA synthetase; Acs3 [Halobacterium sp. NRC-1] Length = 542 Score = 221 bits (557), Expect = 1e-56 Identities = 115/284 (40%), Positives = 175/284 (61%), Gaps = 3/284 (1%) Query: 152 ISQSGAFGGAALAMGNEENVGFSAFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVK 211 +SQSGAF A L N++ +GF S GN A L E+DF++ +ADD +T VI Y+EGV Sbjct: 1 MSQSGAFITAVLDWANDQGIGFKDIASLGNKAVLSETDFMQAWADDPDTNVILGYLEGVD 60 Query: 212 DGRKFFEALKYATSKKPVIILKAGKSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVE 271 DGR+F + + T P +++K+G++E+GA+AA SHTG++AGS Y+A FKQ + E Sbjct: 61 DGREFIDDAREVTQDTPAVVVKSGRTEAGAQAASSHTGTIAGSEAAYEAGFKQAGVVRAE 120 Query: 272 EMEELFDAAKAFEMYQSAGSR-VAVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLRE 330 ++ELFD A+A + S VAVITN+GGPGV+ATD + L +A ++T+ L+ Sbjct: 121 NVQELFDFARALDGLPMPDSEDVAVITNAGGPGVMATDAVGDSRLSMASFEDDTIDALQG 180 Query: 331 FLPPQCSTRNPIDLIADADYERYRRTIEVVCQDENVDSLLVICVPPIFIPSEEIARAI-- 388 +P + + NP+D+I DA+ +R+R I+ V DE+V LV+ P I E++ I Sbjct: 181 SMPDEANVYNPVDVIGDAEIDRFRTAIDTVLADEHVGCALVLSAPTAVIDYTELSGVITA 240 Query: 389 IEAKCNKPIIVNFMAGELVKKGVELLNAHGIKNFPTPERAAKAL 432 ++ K NKP++ M GE ++ ++L GI N+ P RA +L Sbjct: 241 LQEKHNKPVVTCLMGGERTEQATDVLGDAGIPNYFDPARAIGSL 284 >dbj|BAA10925.1| (D64044) hypothetycal 67KD protein fragment in UNG 3' region [Escherichia coli] Length = 612 Score = 201 bits (507), Expect = 1e-50 Identities = 138/447 (30%), Positives = 223/447 (49%), Gaps = 24/447 (5%) Query: 7 PKSVAIFG-SFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRKRLEEEV 65 PKS+A+ G S + ++RN++ GGF G ++PV P V +I L Sbjct: 12 PKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPDIAS-LPFTP 70 Query: 66 DVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVDLEEELIKAAKEAGIRIIG 123 D++++ A L+ EL KG K +++SA S+ E+L A +R++G Sbjct: 71 DLAVLCTNASRNLALLEELGEKGC-KTCIILSAPASQ------HEDLRACALRHNMRLLG 123 Query: 124 PNCAGIFGVHGKFFGSFE-VRVNPGGLALISQSGAFGGAALAMGNEENVGFSAFVSYGNA 182 PN G+ SF V + G LA ISQS A L + +GFS F++ G++ Sbjct: 124 PNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIALGDS 183 Query: 183 ADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAGKSESGAK 242 D+D + L Y A D T I LY+E + D R+F A + A+ KP++++K+G+S Sbjct: 184 LDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRS----P 239 Query: 243 AAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAF-EMYQSAGSRVAVITNSGG 301 AAQ + AG + A ++ + V++ ELF A + M G R+ +I+N Sbjct: 240 AAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAA 299 Query: 302 PGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYRRTIEVVC 361 P LA D L ++A LSEET KLR+ LP + NP+DL DA E Y +T++++ Sbjct: 300 PAALALDALWSRNGKLATLSEETCQKLRDALPEHVAISNPLDLRDDASSEHYIKTLDILL 359 Query: 362 QDENVDSLLVICVPPIFIPSEEIARAIIEAKCNKP------IIVNFMAGELVKKGVELLN 415 ++ D+L+VI P P+ E A+ +IEA + P ++ N+ ++ L + Sbjct: 360 HSQDFDALMVIHSPSAAAPATESAQVLIEAVKHHPRSKYVSLLTNWCGEHSSQEARRLFS 419 Query: 416 AHGIKNFPTPERAAKA-LYWLSKRKNQ 441 G+ + TPE A ++ + R+NQ Sbjct: 420 EAGLPTYRTPEGTITAFMHMVEYRRNQ 446 >sp|P76594|YFIQ_ECOLI HYPOTHETICAL 98.0 KD PROTEIN IN UNG-PSSA INTERGENIC REGION >gi|7466397|pir||G65036 hypothetical protein b2584 - Escherichia coli (strain K-12) >gi|1788938|gb|AAC75637.1| (AE000344) orf, hypothetical protein [Escherichia coli K12] Length = 886 Score = 201 bits (507), Expect = 1e-50 Identities = 138/447 (30%), Positives = 223/447 (49%), Gaps = 24/447 (5%) Query: 7 PKSVAIFG-SFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRKRLEEEV 65 PKS+A+ G S + ++RN++ GGF G ++PV P V +I L Sbjct: 12 PKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPDIAS-LPFTP 70 Query: 66 DVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVDLEEELIKAAKEAGIRIIG 123 D++++ A L+ EL KG K +++SA S+ E+L A +R++G Sbjct: 71 DLAVLCTNASRNLALLEELGEKGC-KTCIILSAPASQ------HEDLRACALRHNMRLLG 123 Query: 124 PNCAGIFGVHGKFFGSFE-VRVNPGGLALISQSGAFGGAALAMGNEENVGFSAFVSYGNA 182 PN G+ SF V + G LA ISQS A L + +GFS F++ G++ Sbjct: 124 PNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIALGDS 183 Query: 183 ADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKKPVIILKAGKSESGAK 242 D+D + L Y A D T I LY+E + D R+F A + A+ KP++++K+G+S Sbjct: 184 LDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRS----P 239 Query: 243 AAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAF-EMYQSAGSRVAVITNSGG 301 AAQ + AG + A ++ + V++ ELF A + M G R+ +I+N Sbjct: 240 AAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAA 299 Query: 302 PGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADADYERYRRTIEVVC 361 P LA D L ++A LSEET KLR+ LP + NP+DL DA E Y +T++++ Sbjct: 300 PAALALDALWSRNGKLATLSEETCQKLRDALPEHVAISNPLDLRDDASSEHYIKTLDILL 359 Query: 362 QDENVDSLLVICVPPIFIPSEEIARAIIEAKCNKP------IIVNFMAGELVKKGVELLN 415 ++ D+L+VI P P+ E A+ +IEA + P ++ N+ ++ L + Sbjct: 360 HSQDFDALMVIHSPSAAAPATESAQVLIEAVKHHPRSKYVSLLTNWCGEHSSQEARRLFS 419 Query: 416 AHGIKNFPTPERAAKA-LYWLSKRKNQ 441 G+ + TPE A ++ + R+NQ Sbjct: 420 EAGLPTYRTPEGTITAFMHMVEYRRNQ 446 >emb|CAA10043.1| (AJ012480) pimeloyl-CoA synthetase [Pseudomonas mendocina] Length = 711 Score = 173 bits (433), Expect = 5e-42 Identities = 115/355 (32%), Positives = 187/355 (52%), Gaps = 17/355 (4%) Query: 7 PKSVAIFGSFREG-AIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGR-RFEIRKRLEEE 64 P+SVA+ G+ + I + ++ GF G+I+PVNP E+ G + L E Sbjct: 20 PRSVAVVGASSDPHRIGGRPIAYMLRNGFTGRILPVNPN--RTEIQGLPAYASVDALPEA 77 Query: 65 VDVSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGN--VDLEEELIKAAKEAGIR 120 DV+I+ +PA V ++ L KG + A+V S+GFSEVG V +++ +++AA+ A +R Sbjct: 78 PDVAIIAVPAPQVLETVQVLGRKG-ARSAIVFSSGFSEVGEEGVAMQDAIVEAARAANMR 136 Query: 121 IIGPNCAGIFGVHGKFFGSFEVRVN-----PGGLALISQSGAFGGAALAMGNEENVGFSA 175 ++GPN G+F + ++ F + G + + +QSGA+G L + + +G Sbjct: 137 LLGPNALGVFNANLGYYAFFSTSLERGIPLAGRVGIATQSGAYGAHLLGLSRQRGLGTPI 196 Query: 176 FVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYA-TSKKPVIILKA 234 V+ GN AD+ D + + + V+ Y E +++ F AL+ A + KPVI+ K Sbjct: 197 CVATGNEADVTLGDAIGWLVESPEVDVVMAYAESIRNVDSFLAALEAAHRAGKPVILHKV 256 Query: 235 GKSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAA-KAFEMYQSAGSRV 293 G+SE G +AA SHT SLAG ++ AV + EEL D A A + + + Sbjct: 257 GRSELGGRAAMSHTASLAGDDKVLDAVLADYAVVRARTTEELVDIAYLATQRIIPVNNSL 316 Query: 294 AVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADA 348 +IT SGG G++ +D E +GL + + EE A+L++ L S NP+D A A Sbjct: 317 GMITVSGGAGIIVSDAAEDVGLPMPPMPEEAQARLKQRL-HYASPLNPVDCTAQA 370 >pir||B83518 pimeloyl-CoA synthetase PA1017 [imported] - Pseudomonas aeruginosa (strain PAO1) >gi|9946928|gb|AAG04406.1|AE004534_4 (AE004534) pimeloyl-CoA synthetase [Pseudomonas aeruginosa] Length = 715 Score = 169 bits (424), Expect = 5e-41 Identities = 138/447 (30%), Positives = 213/447 (46%), Gaps = 29/447 (6%) Query: 7 PKSVAIFGSFREGA-IAREILRNIVEGGFEGKIIPVNPKGGTVEVAGR-RFEIRKRLEEE 64 P+SVA+ G+ + I + ++ G+ G+I+PVNP E+ G F L + Sbjct: 24 PRSVAVIGASSDPTRIGGRPIAYMLRHGYAGQILPVNPN--RAEIQGLPAFASVAELPQA 81 Query: 65 VDVSIVVIPAKLVPGLIREL-KGLTKGAVVISAGFSEVGNVD--LEEELIKAAKEAGIRI 121 DV+IV +PA V +R L + + A+V S+GFSEVG +++ ++ AA+E G+R+ Sbjct: 82 PDVAIVAVPAPQVLETVRALGRQGARSAIVFSSGFSEVGEAGAAMQDAVVAAAREHGMRL 141 Query: 122 IGPNCAGIFGVHGKFFGSFEVRVN-----PGGLALISQSGAFGGAALAMGNEENVGFSAF 176 +GPN G F + ++ F + PG + + +QSGA+G L M + +G Sbjct: 142 LGPNALGAFNSNLGYYAFFSTSLERGVPLPGRVGIATQSGAYGAHLLGMARQRRLGTPIC 201 Query: 177 VSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYA-TSKKPVIILKAG 235 V+ GN AD+ D + + + V+ Y E +++ F AL+ A + KPVI+ K G Sbjct: 202 VATGNEADVTLGDSIGWLVESPEIDVVMAYAESIRNVDSFLAALEAAHRAGKPVILHKVG 261 Query: 236 KSESGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAA-KAFEMYQSAGSRVA 294 +S G++AA SHT SLAG ++ AV I EEL D A A G+ + Sbjct: 262 RSALGSRAALSHTASLAGDDKVLDAVLGDYAVIRARTTEELMDIAYLATRRIYPVGNSLG 321 Query: 295 VITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPIDLIADA--DYER 352 +IT SGG G++ +D E++GL + + + +L+ L S NP+D A A D Sbjct: 322 MITVSGGAGIIVSDVAEEVGLPMPPMPDMAQERLKARL-SFASPINPVDCTAQALNDLTL 380 Query: 353 YRRTIEVVCQDENVDSLLVI-----CVPPIFIPSEEIARAIIEAKCNKPIIVNFMAGELV 407 R E + D SLL I E R I EA + +V+ M Sbjct: 381 VRDFTESMVVDGGYRSLLAFFTQAGTAASIGARLAEQFRRIKEAHPERLFVVSVMG---- 436 Query: 408 KKGVEL--LNAHGIKNFPTPERAAKAL 432 +G EL G F P RA A+ Sbjct: 437 -EGEELAPYEEAGFALFEDPTRAVVAI 462 >pir||T35878 hypothetical protein SC9B10.09 - Streptomyces coelicolor >gi|2661695|emb|CAA15799.1| (AL009204) hypothetical protein SC9B10.09 [Streptomyces coelicolor A3(2)] Length = 1039 Score = 136 bits (339), Expect = 5e-31 Identities = 121/423 (28%), Positives = 193/423 (45%), Gaps = 59/423 (13%) Query: 7 PKSVAIFGSFRE-GAIAREILRNIVEGGFEGKIIPVN---PKGGTVEVAGRRFEIRKRLE 62 P SVA+ G+ R G + R IL NI + G+ G++ VN P+ ++ Sbjct: 212 PGSVAVVGAGRTPGGVGRSILGNIRDAGYTGRLYAVNRAFPEDMKELDGVPACRSVGDID 271 Query: 63 EEVDVSIVVIPAKLVPGLIREL-KGLTKGAVVISAGFSEVGNVDLEEE--LIKAAKEAGI 119 VD+++V +PA+ VP ++ + +G VVISAG+++ G E + L++ A+ G+ Sbjct: 272 GPVDLAVVTVPAEHVPDVVTACGEHGVQGLVVISAGYADSGPEGRERQRALVRHARTYGM 331 Query: 120 RIIGPNCAGIFGVHGKFFGSFEVRVNP---------GGLALISQSGAFGGAALAMGNEEN 170 RIIGPN GI S +VR+N G + L +QSGA G A L+ + Sbjct: 332 RIIGPNAFGIINT------SPDVRLNASLAPEMPRAGRIGLFAQSGAIGIALLSRLHRRG 385 Query: 171 ------VGFSAFVSYGNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYAT 224 G S FVS GN AD+ +D L+Y+ DD T V +Y+E + + RKF + Sbjct: 386 GGVTGVTGVSTFVSSGNRADVSGNDVLQYWYDDPQTDVALMYLESIGNPRKFTRLARRTA 445 Query: 225 SKKPVIILKAGKSESGAKAAQSH-TGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAF 283 + KP+++++ + G A Q H + + A+ +Q I V+ + +L DA Sbjct: 446 AAKPLVVVQGAR--HGGVAPQGHAVRATRLPHATVSALLRQAGVIRVDTITDLVDAGLLL 503 Query: 284 EMYQ-SAGSRVAVITNSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPI 342 AG RVA++ NS G+L D A L E L PQ P+ Sbjct: 504 ARQPLPAGPRVAILGNSESLGLLTYD-----------------ACLSEGLRPQ----PPL 542 Query: 343 DLIADADYERYRRTIEVVCQDENVDSLLVICVPPI------FIPSEEIARAIIEAKCNKP 396 DL A + + + D+ D+++V +P + E R+ A KP Sbjct: 543 DLTTAASADDFHAALARALADDTCDAVVVTAIPTLGEGAAGDAALAEALRSAAAAVPTKP 602 Query: 397 IIV 399 ++V Sbjct: 603 VLV 605 >pir||H83024 hypothetical protein PA4978 [imported] - Pseudomonas aeruginosa (strain PAO1) >gi|9951261|gb|AAG08363.1|AE004910_10 (AE004910) hypothetical protein [Pseudomonas aeruginosa] Length = 696 Score = 107 bits (264), Expect = 3e-22 Identities = 102/346 (29%), Positives = 158/346 (45%), Gaps = 19/346 (5%) Query: 7 PKSVAIFGSFREGAIAREILRNIVEGGFEGKIIPVNPKGGTVEVAGRRFEIRKRLEEEVD 66 P+ +A G G L+ EGGF G++ VNP+ +E + L D Sbjct: 12 PRHLAFIG----GRGMARALKRCAEGGFAGQLWLVNPQHAELEGVPCVASVAD-LPCGPD 66 Query: 67 VSIVVIPAKLVPGLIREL--KGLTKGAVVISAGFSEVGNVDL--EEELIKAAKEAGIRII 122 + V +L + L KG GA+ ++GF+E G L + L+ AA E + ++ Sbjct: 67 AAFVATNRELTLDAVAALAAKG-AGGAICYASGFAETGEQGLAVQRRLLAAAGE--MALL 123 Query: 123 GPNCAGIFG-VHGKFFG--SFEVRVNPGGLALISQSGAFGGAALAMGNEENVGFSAFVSY 179 GPNC G+ +HG + R G+A+++QSG F L+M ++ ++ + S Sbjct: 124 GPNCYGLLDYLHGAALWPVAHGGRQVERGVAVLTQSGNFA-YNLSM-SDRSLPVAYMASV 181 Query: 180 GNAADLDESDFLRYFADDENTKVIALYIEGVKDGRKFFEALKYATSKK-PVIILKAGKSE 238 GN A L ++ + D+ I L++EG+K+ F A A K PVI LK G S+ Sbjct: 182 GNQAQLGIAELMDVLLDEPRVTAIGLHLEGLKNVPGFARAAYKALQKGVPVIALKTGVSK 241 Query: 239 SGAKAAQSHTGSLAGSYEIYKAVFKQGNAIEVEEMEELFDAAKAFEM-YQSAGSRVAVIT 297 GA A SHT SLAGS +Y ++F++ I V + KA + G + + Sbjct: 242 IGAALALSHTSSLAGSDALYDSLFERLGVIRVSGPVSFVETLKAAACGHLPGGPSLVALA 301 Query: 298 NSGGPGVLATDKLEKLGLEIARLSEETVAKLREFLPPQCSTRNPID 343 SGG L D E+ GL + +L LP + NP+D Sbjct: 302 CSGGDAGLIADYAERNGLGLPSFDAGQRDELAGVLPDYANIANPLD 347 Database: ./suso.pep Posted date: Jul 6, 2001 5:57 PM Number of letters in database: 840,471 Number of sequences in database: 2977 Database: /banques/blast2/nr.pep Posted date: Dec 14, 2000 12:46 PM Number of letters in database: 188,266,275 Number of sequences in database: 595,510 Lambda K H 0.318 0.138 0.388 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 161282419 Number of Sequences: 2977 Number of extensions: 6818012 Number of successful extensions: 18939 Number of sequences better than 1.0e-10: 30 Number of HSP's better than 0.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 18767 Number of HSP's gapped (non-prelim): 35 length of query: 442 length of database: 189,106,746 effective HSP length: 58 effective length of query: 384 effective length of database: 154,394,500 effective search space: 59287488000 effective search space used: 59287488000 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.7 bits) S2: 166 (69.1 bits)